CmoCh06G009520 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G009520
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
LocationCmo_Chr06 : 7419858 .. 7420529 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAAGAGATGAAGCGCAAGAACAAAAGCAAGAACACGTCCAAAATCCGAAGGATTTGAAAGAAGAAAAGAAGGGAGCAAGCCCATACTACCCAAAAACCACTCGGCGCTCTGTTTGCGCATGCATATCCATCTTCCTCCTCATAATTGGCGTGGTGGCTCTCACTCTCTGGCTTGTGTACCGCCCCTCTCACCCTCAATTCAAGGTGGTTGGAGCCGCAATATACGAGCTCAACATCTCATCTCTGCCACTGCTGTCCACAAGGATGCAATTTACAATCCTTACAAGGAACCCCAACAGGCGAGTTGGGATCTATTATGACAGACTCACTGCGTTCGTGTCGTATAGGAACCAGCAGATAACGCCACAGGTGATGCTGCCTCCCCTGTTTCATGAAAAGCAGAGCACAGTGGCGATGTCGCCTGTACTAGGAGGTGGGGCGGTGGCAGTGCCGTTGGAGGTGGGAAATGGGTTGGTCACGGATGAAGCGATTGGAGTTGTGGGGTTAAGAGTTGTGTTGTTGGGGAGACTAAGATGGAAAGCTGGGCCAGTCAAGACTGGGCGTTATGCGGTAATTGTGAAATGTGACGTGTTGGTGGGTCTCAAAAGTGGGGTGGTGGGTCAAGTTCCGTTGCTTGGTTTCCCCGCTTGCCAGGTTGATATTTAG

mRNA sequence

ATGGCAGAAAGAGATGAAGCGCAAGAACAAAAGCAAGAACACGTCCAAAATCCGAAGGATTTGAAAGAAGAAAAGAAGGGAGCAAGCCCATACTACCCAAAAACCACTCGGCGCTCTGTTTGCGCATGCATATCCATCTTCCTCCTCATAATTGGCGTGGTGGCTCTCACTCTCTGGCTTGTGTACCGCCCCTCTCACCCTCAATTCAAGGTGGTTGGAGCCGCAATATACGAGCTCAACATCTCATCTCTGCCACTGCTGTCCACAAGGATGCAATTTACAATCCTTACAAGGAACCCCAACAGGCGAGTTGGGATCTATTATGACAGACTCACTGCGTTCGTGTCGTATAGGAACCAGCAGATAACGCCACAGGTGATGCTGCCTCCCCTGTTTCATGAAAAGCAGAGCACAGTGGCGATGTCGCCTGTACTAGGAGGTGGGGCGGTGGCAGTGCCGTTGGAGGTGGGAAATGGGTTGGTCACGGATGAAGCGATTGGAGTTGTGGGGTTAAGAGTTGTGTTGTTGGGGAGACTAAGATGGAAAGCTGGGCCAGTCAAGACTGGGCGTTATGCGGTAATTGTGAAATGTGACGTGTTGGTGGGTCTCAAAAGTGGGGTGGTGGGTCAAGTTCCGTTGCTTGGTTTCCCCGCTTGCCAGGTTGATATTTAG

Coding sequence (CDS)

ATGGCAGAAAGAGATGAAGCGCAAGAACAAAAGCAAGAACACGTCCAAAATCCGAAGGATTTGAAAGAAGAAAAGAAGGGAGCAAGCCCATACTACCCAAAAACCACTCGGCGCTCTGTTTGCGCATGCATATCCATCTTCCTCCTCATAATTGGCGTGGTGGCTCTCACTCTCTGGCTTGTGTACCGCCCCTCTCACCCTCAATTCAAGGTGGTTGGAGCCGCAATATACGAGCTCAACATCTCATCTCTGCCACTGCTGTCCACAAGGATGCAATTTACAATCCTTACAAGGAACCCCAACAGGCGAGTTGGGATCTATTATGACAGACTCACTGCGTTCGTGTCGTATAGGAACCAGCAGATAACGCCACAGGTGATGCTGCCTCCCCTGTTTCATGAAAAGCAGAGCACAGTGGCGATGTCGCCTGTACTAGGAGGTGGGGCGGTGGCAGTGCCGTTGGAGGTGGGAAATGGGTTGGTCACGGATGAAGCGATTGGAGTTGTGGGGTTAAGAGTTGTGTTGTTGGGGAGACTAAGATGGAAAGCTGGGCCAGTCAAGACTGGGCGTTATGCGGTAATTGTGAAATGTGACGTGTTGGTGGGTCTCAAAAGTGGGGTGGTGGGTCAAGTTCCGTTGCTTGGTTTCCCCGCTTGCCAGGTTGATATTTAG
Homology
[Close]
BLAST of CmoCh06G009520 vs. Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-24
Identity = 59/174 (33.91%), Postives = 95/174 (54.60%), Query Frame = 1 

Query: 36  TRRSVCACISIFLLIIGVVALTLWLVYRPSHPQFKVVGAAIYELNISSLPLLSTRMQFTI 95
           T   +C  I  F++I+ +    +W++ +P+ P+F +  A +Y  N+S   LL++  Q TI
Sbjct: 17  TASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITI 76

Query: 96  LTRNPNRRVGIYYDRLTAFVSYRNQQITPQVMLPPLFHEKQSTVAMSPVLGGGAVAVPLE 155
            +RN N R+GIYYDRL  + +YRNQQIT +  +PP +   +     SP + G +V +   
Sbjct: 77  ASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPF 136

Query: 156 VGNGLVTDEAIGVVGLRVVLLGRLRWKAGPVKTGRYAVIVKCDVLVGLKSGVVG 210
               L  ++  G V L +   GR+RWK G + TG+Y + V+C   + L     G
Sbjct: 137 NAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINLADKAAG 190

[Close]
BLAST of CmoCh06G009520 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.1e-12
Identity = 49/170 (28.82%), Postives = 84/170 (49.41%), Query Frame = 1 

Query: 41  CACISIF-------LLIIGVVALTLWLVYRPSHPQFKVVGAAIYELNISSLP-LLSTRMQ 100
           C  +S+F       ++I+GV AL  WL+ RP   +F V  A++   + +S   +L   + 
Sbjct: 35  CCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLA 94

Query: 101 FTILTRNPNRRVGIYYDRLTAFVSYRNQQITPQVMLPPLFHEKQSTVAMSPVLGGGAVAV 160
            T+  RNPN+R+G+YYDR+ A   Y  ++ +  + L P +   ++T  ++P   G  + +
Sbjct: 95  LTVPVRNPNKRIGLYYDRIEAHAYYEGKRFS-TITLTPFYQGHKNTTVLTPTFQGQNLVI 154

Query: 161 PLEVGNG--LVTDEAIGVVGLRVVLLGRLRWKAGPVKTGRYAVIVKCDVL 201
               G    L  +   GV  + +    R+R+K G +K  R    V CD L
Sbjct: 155 -FNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDL 202

[Close]
BLAST of CmoCh06G009520 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.8e-11
Identity = 43/158 (27.22%), Postives = 77/158 (48.73%), Query Frame = 1 

Query: 49  LIIGVVALTLWLVYRPSHPQFKVVGAAIYELNISSLPLLSTRMQFTILTRNPNRRVGIYY 108
           +++G+ AL +WL++RP+  +F V  A + E  +     L   +      RNPNRR+G+YY
Sbjct: 57  VLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYY 116

Query: 109 DRLTAFVSYRNQQITPQVMLPPLFH-EKQSTVAMSPVLGGGAVAVPLEVGNGLVTDEAIG 168
           D +     Y +Q+      +   +   K +TV  + ++G   V +       L  D    
Sbjct: 117 DEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQ 176

Query: 169 VVGLRVVLLGRLRWKAGPVKTGRYAVIVKCDVLVGLKS 206
           +  +   L  ++R+K G +K+ R+   +KCD+ V L S
Sbjct: 177 IYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTS 214

[Close]
BLAST of CmoCh06G009520 vs. TrEMBL
Match: A0A0A0L882_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116630 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.6e-87
Identity = 176/226 (77.88%), Postives = 194/226 (85.84%), Query Frame = 1 

Query: 1   MAERDEAQEQKQEHVQNPKDLKEEKKGA---SPYYPKTTRRSVCACISIFLLIIGVVALT 60
           MAER+E    +Q  V + KDLKEEK  A   S YY K TRRSVCACISIFLL+IGVVALT
Sbjct: 1   MAERNE----EQGDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALT 60

Query: 61  LWLVYRPSHPQFKVVGAAIYELNISSLPLLSTRMQFTILTRNPNRRVGIYYDRLTAFVSY 120
           LWLVYRP  PQF VVGAAIY+LN+SSLPLLST MQFTI+TRNPNRRV IYYDRLT FVSY
Sbjct: 61  LWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSY 120

Query: 121 RNQQITPQVMLPPLFHEKQSTVAMSPVLGGGAVAVPLEVGNGLVTDEAIGVVGLRVVLLG 180
           RNQQIT QV+LPPL HEK+STVAMSPVLGGGAVAV LEV NGLVTD+ IGV+GLRVVLLG
Sbjct: 121 RNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLG 180

Query: 181 RLRWKAGPVKTGRYAVIVKCDVLVGLKSGVVGQVPLLGFPACQVDI 224
           RLRWKAGP+KTGRY+V VKCDVLVG+K G+VGQ+P+L  P C+VDI
Sbjct: 181 RLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI 222

[Close]
BLAST of CmoCh06G009520 vs. TrEMBL
Match: M5X269_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011309mg PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.9e-72
Identity = 144/214 (67.29%), Postives = 168/214 (78.50%), Query Frame = 1 

Query: 10  QKQEHVQNPKDLKEEKKGASPYYPKTTRRSVCACISIFLLIIGVVALTLWLVYRPSHPQF 69
           ++++H +NP   K+    +SP Y     RS+C C+SIFLL+ GV ALTLWLVYRP  PQF
Sbjct: 3   EEEDHKKNPTT-KKRYMASSPIYTSGPYRSICTCLSIFLLLAGVTALTLWLVYRPHKPQF 62

Query: 70  KVVGAAIYELNISSLPLLSTRMQFTILTRNPNRRVGIYYDRLTAFVSYRNQQITPQVMLP 129
            VVGAA+Y+LN +S PL+ST MQFT++T NPNRRV IYYDRL AFVSY+NQ ITPQV LP
Sbjct: 63  TVVGAAVYDLNATSPPLISTTMQFTLVTHNPNRRVSIYYDRLYAFVSYKNQAITPQVALP 122

Query: 130 PLFHEKQSTVAMSPVLGGGAVAVPLEVGNGLVTDEAIGVVGLRVVLLGRLRWKAGPVKTG 189
            L HE +STVA+SPVLGG AV V LEV NGL  DEA GVVGLRVV++GRLRWKAG ++T 
Sbjct: 123 SLVHEHRSTVAVSPVLGGRAVPVSLEVVNGLTMDEAYGVVGLRVVVMGRLRWKAGAIRTA 182

Query: 190 RYAVIVKCDVLVGLKSGVVGQVPLLGFPACQVDI 224
            Y V VKCDVLVGLK G VGQVPLLG P+CQVDI
Sbjct: 183 HYGVYVKCDVLVGLKRGFVGQVPLLGNPSCQVDI 215

[Close]
BLAST of CmoCh06G009520 vs. TrEMBL
Match: F6I2Y6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02530 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.0e-70
Identity = 137/199 (68.84%), Postives = 156/199 (78.39%), Query Frame = 1 

Query: 25  KKGASPYYPKTTRRSVCACISIFLLIIGVVALTLWLVYRPSHPQFKVVGAAIYELNISSL 84
           +K  SPY PK  RR+ C  I I LL+ G+ AL +WLVYRP  PQF V+G AIY+LN +S 
Sbjct: 4   EKPPSPYRPKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQFTVMGVAIYDLNTTSP 63

Query: 85  PLLSTRMQFTILTRNPNRRVGIYYDRLTAFVSYRNQQITPQVMLPPLFHEKQSTVAMSPV 144
           PL+ST MQFTI+TRNPN+RV IYYDRL+AFVSYRNQ ITP  MLPPL+H K STVA+SPV
Sbjct: 64  PLISTNMQFTIVTRNPNKRVSIYYDRLSAFVSYRNQAITPPAMLPPLYHRKHSTVALSPV 123

Query: 145 LGGGAVAVPLEVGNGLVTDEAIGVVGLRVVLLGRLRWKAGPVKTGRYAVIVKCDVLVGLK 204
           LGG AV V LEV NGLV DEA GV+GLR+VLLGRL+WKAG   +  Y V VKCDVLVGLK
Sbjct: 124 LGGEAVPVSLEVANGLVMDEAYGVMGLRLVLLGRLKWKAGAFWSMHYGVYVKCDVLVGLK 183

Query: 205 SGVVGQVPLLGFPACQVDI 224
            GVVGQVP+LG P C VDI
Sbjct: 184 KGVVGQVPMLGSPLCNVDI 202

[Close]
BLAST of CmoCh06G009520 vs. TrEMBL
Match: A5BJJ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027904 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.0e-70
Identity = 137/199 (68.84%), Postives = 156/199 (78.39%), Query Frame = 1 

Query: 25  KKGASPYYPKTTRRSVCACISIFLLIIGVVALTLWLVYRPSHPQFKVVGAAIYELNISSL 84
           +K  SPY PK  RR+ C  I I LL+ G+ AL +WLVYRP  PQF V+G AIY+LN +S 
Sbjct: 793 EKPPSPYRPKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQFTVMGVAIYDLNTTSP 852

Query: 85  PLLSTRMQFTILTRNPNRRVGIYYDRLTAFVSYRNQQITPQVMLPPLFHEKQSTVAMSPV 144
           PL+ST MQFTI+TRNPN+RV IYYDRL+AFVSYRNQ ITP  MLPPL+H K STVA+SPV
Sbjct: 853 PLISTNMQFTIVTRNPNKRVSIYYDRLSAFVSYRNQAITPPAMLPPLYHRKHSTVALSPV 912

Query: 145 LGGGAVAVPLEVGNGLVTDEAIGVVGLRVVLLGRLRWKAGPVKTGRYAVIVKCDVLVGLK 204
           LGG AV V LEV NGLV DEA GV+GLR+VLLGRL+WKAG   +  Y V VKCDVLVGLK
Sbjct: 913 LGGEAVPVSLEVANGLVMDEAYGVMGLRLVLLGRLKWKAGAFWSMHYGVYVKCDVLVGLK 972

Query: 205 SGVVGQVPLLGFPACQVDI 224
            GVVGQVP+LG P C VDI
Sbjct: 973 KGVVGQVPMLGSPXCNVDI 991

[Close]
BLAST of CmoCh06G009520 vs. TrEMBL
Match: B9RNK9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1339920 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.1e-67
Identity = 132/219 (60.27%), Postives = 163/219 (74.43%), Query Frame = 1 

Query: 5   DEAQEQKQEHVQNPKDLKEEKKGASPYYPKTTRRSVCACISIFLLIIGVVALTLWLVYRP 64
           DE   Q Q+H+  P           P Y    RR++C  I+IFLL+ G+    +WL+YRP
Sbjct: 19  DEKHHQPQKHMSPP-----------PSYKSDPRRTICTVITIFLLLAGLAVFIVWLIYRP 78

Query: 65  SHPQFKVVGAAIYELNISSLPLLSTRMQFTILTRNPNRRVGIYYDRLTAFVSYRNQQITP 124
             P+F V+GAAIY+LN +S P +S  MQFTI+TRNPN+RV I YD+L+A+VSYRNQ ITP
Sbjct: 79  HKPRFTVLGAAIYDLNTTSPPFVSASMQFTIVTRNPNKRVAIIYDKLSAYVSYRNQAITP 138

Query: 125 QVMLPPLFHEKQSTVAMSPVLGGGAVAVPLEVGNGLVTDEAIGVVGLRVVLLGRLRWKAG 184
            V+LPPL+H+K+STVA+SPVLGG  V V +EV NGLV DE+ GVV LRVVLLGRLRWKAG
Sbjct: 139 TVVLPPLYHDKKSTVALSPVLGGAQVPVSVEVANGLVMDESYGVVALRVVLLGRLRWKAG 198

Query: 185 PVKTGRYAVIVKCDVLVGLKSGVVGQVPLLGFPACQVDI 224
            +KTGRY V VKCD+ VGLK G+VGQVPLLG P C+VD+
Sbjct: 199 VIKTGRYGVYVKCDIWVGLKRGLVGQVPLLGSPQCKVDV 226

[Close]
BLAST of CmoCh06G009520 vs. TAIR10
Match: AT4G01410.1 (AT4G01410.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 207.6 bits (527), Expect = 7.9e-54
Identity = 101/187 (54.01%), Postives = 135/187 (72.19%), Query Frame = 1 

Query: 37  RRSVCACISIFLLIIGVVALTLWLVYRPSHPQFKVVGAAIYELNISSLPLLSTRMQFTIL 96
           RR++C  I   L+I+G++AL LWLVYRP  P+  VVGAAIY+LN ++ PL+ST +QF++L
Sbjct: 41  RRAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVL 100

Query: 97  TRNPNRRVGIYYDRLTAFVSYRNQQITPQVMLPPLFHEKQSTVAMSPVLGGGAVAVPLEV 156
            RNPNRRV I+YD+L+ +V+Y++Q ITP + LPPL    +STV ++PV+GG  + V  EV
Sbjct: 101 ARNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVSPEV 160

Query: 157 GNGLVTDEAIGVVGLRVVLLGRLRWKAGPVKTGRYAVIVKCDVLVGLKSGVVGQVPLLGF 216
            NGL  DEA GVV +RVV+ GRLRWKAG +KTGRY    +CDV +       GQVPLL  
Sbjct: 161 ANGLKNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDVWLRFNPSSNGQVPLLAP 220

Query: 217 PACQVDI 224
             C+VD+
Sbjct: 221 STCKVDV 227

[Close]
BLAST of CmoCh06G009520 vs. TAIR10
Match: AT5G06330.1 (AT5G06330.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 121.3 bits (303), Expect = 7.4e-28
Identity = 74/188 (39.36%), Postives = 106/188 (56.38%), Query Frame = 1 

Query: 27  GASPYYPKTTRRSVCACISIFLLIIGVVALTLWLVYRPSHPQFKVVGAAIYELNISSLP- 86
           G+   +    R+ V   ISI LL+I VV L +W + +PS P+F +  A ++  N+S  P 
Sbjct: 7   GSHDSHSSCNRKIVIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNVSGNPP 66

Query: 87  -LLSTRMQFTILTRNPNRRVGIYYDRLTAFVSYRNQQIT-PQVMLPPLFHEKQSTVAMSP 146
            LL++  QFT+ +RNPN ++GIYYDRL  + SYR+QQIT P  ML      K+  V  SP
Sbjct: 67  NLLTSNFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVNV-WSP 126

Query: 147 VLGGGAVAVPLEVGNGLVTDEAIGVVGLRVVLLGRLRWKAGPVKTGRYAVIVKCDVLVGL 206
            +GG +V V       L  D + G + L + L GR+RWK G   TG+Y + V+C  L+  
Sbjct: 127 FVGGYSVPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHALINF 186

Query: 207 KSGVVGQV 212
            S   G +
Sbjct: 187 GSSAAGVI 193

[Close]
BLAST of CmoCh06G009520 vs. TAIR10
Match: AT3G52470.1 (AT3G52470.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-27
Identity = 60/172 (34.88%), Postives = 96/172 (55.81%), Query Frame = 1 

Query: 38  RSVCACISIFLLIIGVVALTLWLVYRPSHPQFKVVGAAIYELNISSLPLLSTRMQFTILT 97
           R +CA I  F++I+ +    +W++ RP+ P+F +  A +Y  N+S   LL++  Q TI +
Sbjct: 17  RKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTIAS 76

Query: 98  RNPNRRVGIYYDRLTAFVSYRNQQITPQVMLPPLFHEKQSTVAMSPVLGGGAVAVPLEVG 157
           RNPN ++GIYYDRL  + +Y NQQIT +  +PP +   +     SP + G AV +     
Sbjct: 77  RNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNS 136

Query: 158 NGLVTDEAIGVVGLRVVLLGRLRWKAGPVKTGRYAVIVKCDVLVGLKSGVVG 210
             L  ++  G VGL +   G +RWK   + TG+Y + V+C   + L +   G
Sbjct: 137 VALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFINLGNKAAG 188

[Close]
BLAST of CmoCh06G009520 vs. TAIR10
Match: AT2G35960.1 (AT2G35960.1 NDR1/HIN1-like 12)

HSP 1 Score: 114.8 bits (286), Expect = 7.0e-26
Identity = 59/174 (33.91%), Postives = 95/174 (54.60%), Query Frame = 1 

Query: 36  TRRSVCACISIFLLIIGVVALTLWLVYRPSHPQFKVVGAAIYELNISSLPLLSTRMQFTI 95
           T   +C  I  F++I+ +    +W++ +P+ P+F +  A +Y  N+S   LL++  Q TI
Sbjct: 17  TASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITI 76

Query: 96  LTRNPNRRVGIYYDRLTAFVSYRNQQITPQVMLPPLFHEKQSTVAMSPVLGGGAVAVPLE 155
            +RN N R+GIYYDRL  + +YRNQQIT +  +PP +   +     SP + G +V +   
Sbjct: 77  ASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPF 136

Query: 156 VGNGLVTDEAIGVVGLRVVLLGRLRWKAGPVKTGRYAVIVKCDVLVGLKSGVVG 210
               L  ++  G V L +   GR+RWK G + TG+Y + V+C   + L     G
Sbjct: 137 NAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINLADKAAG 190

[Close]
BLAST of CmoCh06G009520 vs. TAIR10
Match: AT3G11660.1 (AT3G11660.1 NDR1/HIN1-like 1)

HSP 1 Score: 111.7 bits (278), Expect = 5.9e-25
Identity = 64/176 (36.36%), Postives = 96/176 (54.55%), Query Frame = 1 

Query: 38  RSVCACISIFLLIIGVVALTLWLVYRPSHPQFKVVGAAIYELNISSLP--LLSTRMQFTI 97
           R +   I   L II +  L +W + +PS P+F +  A +Y  N+S  P  LL++  Q T+
Sbjct: 16  RRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQITL 75

Query: 98  LTRNPNRRVGIYYDRLTAFVSYRNQQITPQVMLPPLFHEKQSTVAMSPVLGGGAVAVPLE 157
            +RNPN ++GIYYDRL  + +YR+QQIT    +PP +   +     SP + G +V +   
Sbjct: 76  SSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPFVYGTSVPIAPF 135

Query: 158 VGNGLVTDEAIGVVGLRVVLLGRLRWKAGPVKTGRYAVIVKCDVLVGLKSGVVGQV 212
            G  L TD+  GVV L +   GR+RWK G   TG+Y + VKC   +   +   G +
Sbjct: 136 NGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYINFGNKANGVI 191

[Close]
BLAST of CmoCh06G009520 vs. NCBI nr
Match: gi|659074695|ref|XP_008437747.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 331.6 bits (849), Expect = 1.0e-87
Identity = 176/226 (77.88%), Postives = 195/226 (86.28%), Query Frame = 1 

Query: 1   MAERDEAQEQKQEHVQNPKDLKEEKKGAS---PYYPKTTRRSVCACISIFLLIIGVVALT 60
           MAER+E    +Q+ V N +DLKEEK  A     YY K+TRRSVCACISIFLLIIGVVALT
Sbjct: 1   MAERNE----EQDDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALT 60

Query: 61  LWLVYRPSHPQFKVVGAAIYELNISSLPLLSTRMQFTILTRNPNRRVGIYYDRLTAFVSY 120
           LWLVYRP  PQF VVGAAIY+LN+SSLPLLST MQFTI+TRNPNRRV IYYDRLT FVSY
Sbjct: 61  LWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSY 120

Query: 121 RNQQITPQVMLPPLFHEKQSTVAMSPVLGGGAVAVPLEVGNGLVTDEAIGVVGLRVVLLG 180
           RNQQIT QV+LPPL HEK+STVAMSPVLGGGAVAV LEV NGLVTD+ IGV+GLRVVLLG
Sbjct: 121 RNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLG 180

Query: 181 RLRWKAGPVKTGRYAVIVKCDVLVGLKSGVVGQVPLLGFPACQVDI 224
           RLRWKAGP+KTGRYAV VKCDVL+G+K G+VGQ+P+L  P C+VDI
Sbjct: 181 RLRWKAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 222

[Close]
BLAST of CmoCh06G009520 vs. NCBI nr
Match: gi|449431934|ref|XP_004133755.1| (PREDICTED: protein YLS9-like [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 2.3e-87
Identity = 176/226 (77.88%), Postives = 194/226 (85.84%), Query Frame = 1 

Query: 1   MAERDEAQEQKQEHVQNPKDLKEEKKGA---SPYYPKTTRRSVCACISIFLLIIGVVALT 60
           MAER+E    +Q  V + KDLKEEK  A   S YY K TRRSVCACISIFLL+IGVVALT
Sbjct: 1   MAERNE----EQGDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALT 60

Query: 61  LWLVYRPSHPQFKVVGAAIYELNISSLPLLSTRMQFTILTRNPNRRVGIYYDRLTAFVSY 120
           LWLVYRP  PQF VVGAAIY+LN+SSLPLLST MQFTI+TRNPNRRV IYYDRLT FVSY
Sbjct: 61  LWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSY 120

Query: 121 RNQQITPQVMLPPLFHEKQSTVAMSPVLGGGAVAVPLEVGNGLVTDEAIGVVGLRVVLLG 180
           RNQQIT QV+LPPL HEK+STVAMSPVLGGGAVAV LEV NGLVTD+ IGV+GLRVVLLG
Sbjct: 121 RNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLG 180

Query: 181 RLRWKAGPVKTGRYAVIVKCDVLVGLKSGVVGQVPLLGFPACQVDI 224
           RLRWKAGP+KTGRY+V VKCDVLVG+K G+VGQ+P+L  P C+VDI
Sbjct: 181 RLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI 222

[Close]
BLAST of CmoCh06G009520 vs. NCBI nr
Match: gi|645284125|ref|XP_008245646.1| (PREDICTED: protein YLS9 [Prunus mume])

HSP 1 Score: 283.5 bits (724), Expect = 3.2e-73
Identity = 145/214 (67.76%), Postives = 169/214 (78.97%), Query Frame = 1 

Query: 10  QKQEHVQNPKDLKEEKKGASPYYPKTTRRSVCACISIFLLIIGVVALTLWLVYRPSHPQF 69
           ++++H +NP   K+    +SP YP    RS+C C+SIFLL+ GV ALTLWLVYRP  PQF
Sbjct: 19  EEEDHKKNPTT-KKRYMASSPIYPSGPYRSICTCLSIFLLLAGVTALTLWLVYRPHKPQF 78

Query: 70  KVVGAAIYELNISSLPLLSTRMQFTILTRNPNRRVGIYYDRLTAFVSYRNQQITPQVMLP 129
            VVGAA+Y+LN +S PL+ST MQFT++T NPNRRV IYYDRL AFVSY+NQ ITPQV LP
Sbjct: 79  TVVGAAVYDLNATSPPLISTTMQFTLVTHNPNRRVSIYYDRLYAFVSYKNQAITPQVALP 138

Query: 130 PLFHEKQSTVAMSPVLGGGAVAVPLEVGNGLVTDEAIGVVGLRVVLLGRLRWKAGPVKTG 189
            L HE +STVA+SPVLGG AV V LEV NGL  DEA GVVGLRVV++GRLRWKAG ++T 
Sbjct: 139 SLVHEHRSTVAVSPVLGGRAVPVSLEVVNGLTMDEAYGVVGLRVVVMGRLRWKAGAIRTA 198

Query: 190 RYAVIVKCDVLVGLKSGVVGQVPLLGFPACQVDI 224
            Y V VKCDVLVGLK G VGQVPLLG P+CQVDI
Sbjct: 199 HYGVYVKCDVLVGLKRGFVGQVPLLGNPSCQVDI 231

[Close]
BLAST of CmoCh06G009520 vs. NCBI nr
Match: gi|596005536|ref|XP_007218377.1| (hypothetical protein PRUPE_ppa011309mg [Prunus persica])

HSP 1 Score: 280.4 bits (716), Expect = 2.7e-72
Identity = 144/214 (67.29%), Postives = 168/214 (78.50%), Query Frame = 1 

Query: 10  QKQEHVQNPKDLKEEKKGASPYYPKTTRRSVCACISIFLLIIGVVALTLWLVYRPSHPQF 69
           ++++H +NP   K+    +SP Y     RS+C C+SIFLL+ GV ALTLWLVYRP  PQF
Sbjct: 3   EEEDHKKNPTT-KKRYMASSPIYTSGPYRSICTCLSIFLLLAGVTALTLWLVYRPHKPQF 62

Query: 70  KVVGAAIYELNISSLPLLSTRMQFTILTRNPNRRVGIYYDRLTAFVSYRNQQITPQVMLP 129
            VVGAA+Y+LN +S PL+ST MQFT++T NPNRRV IYYDRL AFVSY+NQ ITPQV LP
Sbjct: 63  TVVGAAVYDLNATSPPLISTTMQFTLVTHNPNRRVSIYYDRLYAFVSYKNQAITPQVALP 122

Query: 130 PLFHEKQSTVAMSPVLGGGAVAVPLEVGNGLVTDEAIGVVGLRVVLLGRLRWKAGPVKTG 189
            L HE +STVA+SPVLGG AV V LEV NGL  DEA GVVGLRVV++GRLRWKAG ++T 
Sbjct: 123 SLVHEHRSTVAVSPVLGGRAVPVSLEVVNGLTMDEAYGVVGLRVVVMGRLRWKAGAIRTA 182

Query: 190 RYAVIVKCDVLVGLKSGVVGQVPLLGFPACQVDI 224
            Y V VKCDVLVGLK G VGQVPLLG P+CQVDI
Sbjct: 183 HYGVYVKCDVLVGLKRGFVGQVPLLGNPSCQVDI 215

[Close]
BLAST of CmoCh06G009520 vs. NCBI nr
Match: gi|1009142786|ref|XP_015888911.1| (PREDICTED: protein YLS9 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 279.3 bits (713), Expect = 6.1e-72
Identity = 137/203 (67.49%), Postives = 162/203 (79.80%), Query Frame = 1 

Query: 21  LKEEKKGASPYYPKTTRRSVCACISIFLLIIGVVALTLWLVYRPSHPQFKVVGAAIYELN 80
           + + K+    Y P   RR+ C  ++I LL+ G+ ALTLWLVYRP  P+F VVGAAIYELN
Sbjct: 1   MSDGKQNGRTYRPSDPRRACCTFLTILLLLAGITALTLWLVYRPHKPKFTVVGAAIYELN 60

Query: 81  ISSLPLLSTRMQFTILTRNPNRRVGIYYDRLTAFVSYRNQQITPQVMLPPLFHEKQSTVA 140
            S+ PL+ST MQFT++TRNPN+RV IYYDRL+AFVSYRNQ ITPQV LPPL+HEK+STVA
Sbjct: 61  TSTQPLISTTMQFTVVTRNPNKRVSIYYDRLSAFVSYRNQAITPQVSLPPLYHEKKSTVA 120

Query: 141 MSPVLGGGAVAVPLEVGNGLVTDEAIGVVGLRVVLLGRLRWKAGPVKTGRYAVIVKCDVL 200
           +SPVLGGG V V +EV N L  D++ GVVGLR VLLGRLRWKAG V+TG Y V VKCDVL
Sbjct: 121 LSPVLGGGTVPVSVEVVNSLAMDQSYGVVGLRFVLLGRLRWKAGTVRTGHYGVYVKCDVL 180

Query: 201 VGLKSGVVGQVPLLGFPACQVDI 224
           VG+K GV+GQVPLLG P C+VDI
Sbjct: 181 VGIKKGVLGQVPLLGSPGCKVDI 203

The following BLAST results are available for this feature:
BLAST of CmoCh06G009520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NHL12_ARATH1.2e-2433.91NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1[more]
YLS9_ARATH4.1e-1228.82Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1[more]
NHL3_ARATH7.8e-1127.22NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1[more]
BLAST of CmoCh06G009520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L882_CUCSA1.6e-8777.88Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116630 PE=4 SV=1[more]
M5X269_PRUPE1.9e-7267.29Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011309mg PE=4 SV=1[more]
F6I2Y6_VITVI3.0e-7068.84Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02530 PE=4 SV=... [more]
A5BJJ5_VITVI3.0e-7068.84Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027904 PE=4 SV=1[more]
B9RNK9_RICCO4.1e-6760.27Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1339920 PE=4 SV=1[more]
BLAST of CmoCh06G009520 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G01410.17.9e-5454.01 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT5G06330.17.4e-2839.36 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT3G52470.13.7e-2734.88 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT2G35960.17.0e-2633.91 NDR1/HIN1-like 12[more]
AT3G11660.15.9e-2536.36 NDR1/HIN1-like 1[more]
BLAST of CmoCh06G009520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074695|ref|XP_008437747.1|1.0e-8777.88PREDICTED: protein YLS9-like [Cucumis melo][more]
gi|449431934|ref|XP_004133755.1|2.3e-8777.88PREDICTED: protein YLS9-like [Cucumis sativus][more]
gi|645284125|ref|XP_008245646.1|3.2e-7367.76PREDICTED: protein YLS9 [Prunus mume][more]
gi|596005536|ref|XP_007218377.1|2.7e-7267.29hypothetical protein PRUPE_ppa011309mg [Prunus persica][more]
gi|1009142786|ref|XP_015888911.1|6.1e-7267.49PREDICTED: protein YLS9 isoform X2 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000160 phosphorelay signal transduction system
cellular_component GO:0044464 cell part
cellular_component GO:0005622 intracellular
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G009520.1CmoCh06G009520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 95..197
score: 2.
NoneNo IPR availableunknownCoilCoilcoord: 4..24
scor
NoneNo IPR availablePANTHERPTHR31415FAMILY NOT NAMEDcoord: 2..223
score: 1.9E
NoneNo IPR availablePANTHERPTHR31415:SF9SUBFAMILY NOT NAMEDcoord: 2..223
score: 1.9E