Csa3G116630 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G116630
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNHL1; contains IPR004864 (Late embryogenesis abundant protein, LEA-14)
LocationChr3 : 6195034 .. 6195917 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCCTTGAGCATTTTTACATTTACTTACATGAATGATTTTCCGGATTCTCTCTCCCCAGCTCCTTTTTCACTTTCTATTTCATTTTATCACAGAGGCATCGATCCTTATTCTTTATATTTAACTTTCCCCTTAATATTTATAGGACTTTTCTGTAAGAGCACAAGGACCGGACTTTTTCTTTAGGAAACCCTCCCCTCTAGATGTTAGTCTAGCCATGGCAGAAAGAAACGAAGAGCAGGGCGATGTCCATGATCAGAAGGATTTGAAAGAAGAAAAGAACAGAGCAAGATTCTCATCCCGATACTACTCAAAAAGAACTCGCCGCTCTGTTTGCGCATGCATCTCCATCTTCCTCCTCGTAATTGGTGTCGTGGCTCTCACTCTGTGGCTTGTCTACCGCCCCATTGACCCTCAATTCACCGTGGTTGGAGCCGCAATATATGACCTCAACATGTCATCTCTTCCGCTGCTGTCTACAACCATGCAATTCACAATCGTTACGAGGAACCCCAACAGGCGAGTTTCCATTTATTACGACAGACTGACTGTCTTTGTGTCGTATAGGAACCAGCAGATAACGTCGCAGGTGATATTGCCTCCGCTGGCTCACGAAAAGCGGAGCACAGTTGCGATGTCTCCAGTACTAGGCGGTGGGGCGGTGGCAGTGTCGTTGGAGGTGGCAAATGGGTTGGTAACGGATCAAACAATTGGAGTTTTAGGGTTGAGAGTAGTGTTGTTGGGTAGACTAAGATGGAAAGCTGGGCCACTAAAGACTGGACGTTATTCAGTATATGTAAAATGTGATGTGTTGGTGGGTGTGAAAAGAGGCTTGGTGGGTCAACTTCCCATGCTTGCCTCTCCCCCTTGCAAAGTTGATATCTAG

mRNA sequence

ATGGCAGAAAGAAACGAAGAGCAGGGCGATGTCCATGATCAGAAGGATTTGAAAGAAGAAAAGAACAGAGCAAGATTCTCATCCCGATACTACTCAAAAAGAACTCGCCGCTCTGTTTGCGCATGCATCTCCATCTTCCTCCTCGTAATTGGTGTCGTGGCTCTCACTCTGTGGCTTGTCTACCGCCCCATTGACCCTCAATTCACCGTGGTTGGAGCCGCAATATATGACCTCAACATGTCATCTCTTCCGCTGCTGTCTACAACCATGCAATTCACAATCGTTACGAGGAACCCCAACAGGCGAGTTTCCATTTATTACGACAGACTGACTGTCTTTGTGTCGTATAGGAACCAGCAGATAACGTCGCAGGTGATATTGCCTCCGCTGGCTCACGAAAAGCGGAGCACAGTTGCGATGTCTCCAGTACTAGGCGGTGGGGCGGTGGCAGTGTCGTTGGAGGTGGCAAATGGGTTGGTAACGGATCAAACAATTGGAGTTTTAGGGTTGAGAGTAGTGTTGTTGGGTAGACTAAGATGGAAAGCTGGGCCACTAAAGACTGGACGTTATTCAGTATATGTAAAATGTGATGTGTTGGTGGGTGTGAAAAGAGGCTTGGTGGGTCAACTTCCCATGCTTGCCTCTCCCCCTTGCAAAGTTGATATCTAG

Coding sequence (CDS)

ATGGCAGAAAGAAACGAAGAGCAGGGCGATGTCCATGATCAGAAGGATTTGAAAGAAGAAAAGAACAGAGCAAGATTCTCATCCCGATACTACTCAAAAAGAACTCGCCGCTCTGTTTGCGCATGCATCTCCATCTTCCTCCTCGTAATTGGTGTCGTGGCTCTCACTCTGTGGCTTGTCTACCGCCCCATTGACCCTCAATTCACCGTGGTTGGAGCCGCAATATATGACCTCAACATGTCATCTCTTCCGCTGCTGTCTACAACCATGCAATTCACAATCGTTACGAGGAACCCCAACAGGCGAGTTTCCATTTATTACGACAGACTGACTGTCTTTGTGTCGTATAGGAACCAGCAGATAACGTCGCAGGTGATATTGCCTCCGCTGGCTCACGAAAAGCGGAGCACAGTTGCGATGTCTCCAGTACTAGGCGGTGGGGCGGTGGCAGTGTCGTTGGAGGTGGCAAATGGGTTGGTAACGGATCAAACAATTGGAGTTTTAGGGTTGAGAGTAGTGTTGTTGGGTAGACTAAGATGGAAAGCTGGGCCACTAAAGACTGGACGTTATTCAGTATATGTAAAATGTGATGTGTTGGTGGGTGTGAAAAGAGGCTTGGTGGGTCAACTTCCCATGCTTGCCTCTCCCCCTTGCAAAGTTGATATCTAG

Protein sequence

MAERNEEQGDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI*
Homology
[Close]
BLAST of Csa3G116630 vs. Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-26
Identity = 58/168 (34.52%), Postives = 93/168 (55.36%), Query Frame = 1 

Query: 35  TRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTI 94
           T   +C  I  F++++ +    +W++ +P  P+F +  A +Y  N+S   LL++  Q TI
Sbjct: 17  TASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITI 76

Query: 95  VTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLE 154
            +RN N R+ IYYDRL V+ +YRNQQIT +  +PP     +     SP + G +V ++  
Sbjct: 77  ASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPF 136

Query: 155 VANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGV 203
            A  L  +Q  G + L +   GR+RWK G L TG+Y ++V+C   + +
Sbjct: 137 NAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINL 184

[Close]
BLAST of Csa3G116630 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.7e-13
Identity = 50/179 (27.93%), Postives = 82/179 (45.81%), Query Frame = 1 

Query: 31  YSKRTRRSVCAC--ISIF-------LLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMS 90
           Y +R     C C  +S+F       ++++GV AL  WL+ RP   +F V  A++   + +
Sbjct: 24  YYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHT 83

Query: 91  SLP-LLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAM 150
           S   +L   +  T+  RNPN+R+ +YYDR+     Y  ++ ++  + P     K +TV  
Sbjct: 84  SPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLT 143

Query: 151 SPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVL 200
               G   V  +   +  L  ++  GV  + +    R+R+K G LK  R    V CD L
Sbjct: 144 PTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDL 202

[Close]
BLAST of Csa3G116630 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-10
Identity = 42/154 (27.27%), Postives = 72/154 (46.75%), Query Frame = 1 

Query: 48  LVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYY 107
           +++G+ AL +WL++RP   +F V  A + +  +     L   +      RNPNRR+ +YY
Sbjct: 57  VLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYY 116

Query: 108 DRLTVFVSYRNQQI-TSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIG 167
           D + V   Y +Q+   S  I       K +TV  + ++G   V +       L  D    
Sbjct: 117 DEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQ 176

Query: 168 VLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLV 201
           +  +   L  ++R+K G +K+ R+   +KCD+ V
Sbjct: 177 IYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKV 210

[Close]
BLAST of Csa3G116630 vs. TrEMBL
Match: A0A0A0L882_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116630 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 7.1e-120
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1 

Query: 1   MAERNEEQGDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLV 60
           MAERNEEQGDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLV
Sbjct: 1   MAERNEEQGDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLV 60

Query: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQ 120
           YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQ
Sbjct: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQ 120

Query: 121 ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW 180
           ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW
Sbjct: 121 ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW 180

Query: 181 KAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI 223
           KAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI
Sbjct: 181 KAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI 222

[Close]
BLAST of Csa3G116630 vs. TrEMBL
Match: M5X269_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011309mg PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 9.1e-75
Identity = 143/210 (68.10%), Postives = 164/210 (78.10%), Query Frame = 1 

Query: 13  DQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVG 72
           D K     K R   SS  Y+    RS+C C+SIFLL+ GV ALTLWLVYRP  PQFTVVG
Sbjct: 6   DHKKNPTTKKRYMASSPIYTSGPYRSICTCLSIFLLLAGVTALTLWLVYRPHKPQFTVVG 65

Query: 73  AAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAH 132
           AA+YDLN +S PL+STTMQFT+VT NPNRRVSIYYDRL  FVSY+NQ IT QV LP L H
Sbjct: 66  AAVYDLNATSPPLISTTMQFTLVTHNPNRRVSIYYDRLYAFVSYKNQAITPQVALPSLVH 125

Query: 133 EKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSV 192
           E RSTVA+SPVLGG AV VSLEV NGL  D+  GV+GLRVV++GRLRWKAG ++T  Y V
Sbjct: 126 EHRSTVAVSPVLGGRAVPVSLEVVNGLTMDEAYGVVGLRVVVMGRLRWKAGAIRTAHYGV 185

Query: 193 YVKCDVLVGVKRGLVGQLPMLASPPCKVDI 223
           YVKCDVLVG+KRG VGQ+P+L +P C+VDI
Sbjct: 186 YVKCDVLVGLKRGFVGQVPLLGNPSCQVDI 215

[Close]
BLAST of Csa3G116630 vs. TrEMBL
Match: B9RNK9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1339920 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.7e-71
Identity = 134/220 (60.91%), Postives = 172/220 (78.18%), Query Frame = 1 

Query: 3   ERNEEQGDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYR 62
           E ++ Q  V D+K  + +K+ +   S  Y    RR++C  I+IFLL+ G+    +WL+YR
Sbjct: 9   ENHQTQSQVTDEKHHQPQKHMSPPPS--YKSDPRRTICTVITIFLLLAGLAVFIVWLIYR 68

Query: 63  PIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQIT 122
           P  P+FTV+GAAIYDLN +S P +S +MQFTIVTRNPN+RV+I YD+L+ +VSYRNQ IT
Sbjct: 69  PHKPRFTVLGAAIYDLNTTSPPFVSASMQFTIVTRNPNKRVAIIYDKLSAYVSYRNQAIT 128

Query: 123 SQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKA 182
             V+LPPL H+K+STVA+SPVLGG  V VS+EVANGLV D++ GV+ LRVVLLGRLRWKA
Sbjct: 129 PTVVLPPLYHDKKSTVALSPVLGGAQVPVSVEVANGLVMDESYGVVALRVVLLGRLRWKA 188

Query: 183 GPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI 223
           G +KTGRY VYVKCD+ VG+KRGLVGQ+P+L SP CKVD+
Sbjct: 189 GVIKTGRYGVYVKCDIWVGLKRGLVGQVPLLGSPQCKVDV 226

[Close]
BLAST of Csa3G116630 vs. TrEMBL
Match: A5BJJ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027904 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.6e-69
Identity = 134/195 (68.72%), Postives = 155/195 (79.49%), Query Frame = 1 

Query: 28  SRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLS 87
           S Y  K  RR+ C  I I LL+ G+ AL +WLVYRP +PQFTV+G AIYDLN +S PL+S
Sbjct: 797 SPYRPKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQFTVMGVAIYDLNTTSPPLIS 856

Query: 88  TTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGG 147
           T MQFTIVTRNPN+RVSIYYDRL+ FVSYRNQ IT   +LPPL H K STVA+SPVLGG 
Sbjct: 857 TNMQFTIVTRNPNKRVSIYYDRLSAFVSYRNQAITPPAMLPPLYHRKHSTVALSPVLGGE 916

Query: 148 AVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLV 207
           AV VSLEVANGLV D+  GV+GLR+VLLGRL+WKAG   +  Y VYVKCDVLVG+K+G+V
Sbjct: 917 AVPVSLEVANGLVMDEAYGVMGLRLVLLGRLKWKAGAFWSMHYGVYVKCDVLVGLKKGVV 976

Query: 208 GQLPMLASPPCKVDI 223
           GQ+PML SP C VDI
Sbjct: 977 GQVPMLGSPXCNVDI 991

[Close]
BLAST of Csa3G116630 vs. TrEMBL
Match: F6I2Y6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02530 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.4e-69
Identity = 134/195 (68.72%), Postives = 155/195 (79.49%), Query Frame = 1 

Query: 28  SRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLS 87
           S Y  K  RR+ C  I I LL+ G+ AL +WLVYRP +PQFTV+G AIYDLN +S PL+S
Sbjct: 8   SPYRPKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQFTVMGVAIYDLNTTSPPLIS 67

Query: 88  TTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGG 147
           T MQFTIVTRNPN+RVSIYYDRL+ FVSYRNQ IT   +LPPL H K STVA+SPVLGG 
Sbjct: 68  TNMQFTIVTRNPNKRVSIYYDRLSAFVSYRNQAITPPAMLPPLYHRKHSTVALSPVLGGE 127

Query: 148 AVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLV 207
           AV VSLEVANGLV D+  GV+GLR+VLLGRL+WKAG   +  Y VYVKCDVLVG+K+G+V
Sbjct: 128 AVPVSLEVANGLVMDEAYGVMGLRLVLLGRLKWKAGAFWSMHYGVYVKCDVLVGLKKGVV 187

Query: 208 GQLPMLASPPCKVDI 223
           GQ+PML SP C VDI
Sbjct: 188 GQVPMLGSPLCNVDI 202

[Close]
BLAST of Csa3G116630 vs. TAIR10
Match: AT4G01410.1 (AT4G01410.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-56
Identity = 101/187 (54.01%), Postives = 139/187 (74.33%), Query Frame = 1 

Query: 36  RRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIV 95
           RR++C  I   L+++G++AL LWLVYRP  P+ TVVGAAIYDLN ++ PL+ST++QF+++
Sbjct: 41  RRAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVL 100

Query: 96  TRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEV 155
            RNPNRRVSI+YD+L+++V+Y++Q IT  + LPPL    +STV ++PV+GG  + VS EV
Sbjct: 101 ARNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVSPEV 160

Query: 156 ANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLAS 215
           ANGL  D+  GV+ +RVV+ GRLRWKAG +KTGRY  Y +CDV +       GQ+P+LA 
Sbjct: 161 ANGLKNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDVWLRFNPSSNGQVPLLAP 220

Query: 216 PPCKVDI 223
             CKVD+
Sbjct: 221 STCKVDV 227

[Close]
BLAST of Csa3G116630 vs. TAIR10
Match: AT3G52470.1 (AT3G52470.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-28
Identity = 59/174 (33.91%), Postives = 95/174 (54.60%), Query Frame = 1 

Query: 37  RSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVT 96
           R +CA I  F++++ +    +W++ RP  P+F +  A +Y  N+S   LL++  Q TI +
Sbjct: 17  RKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTIAS 76

Query: 97  RNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVA 156
           RNPN ++ IYYDRL V+ +Y NQQIT +  +PP     +     SP + G AV ++   +
Sbjct: 77  RNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNS 136

Query: 157 NGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQL 211
             L  ++  G +GL +   G +RWK   L TG+Y ++V+C   + +     G L
Sbjct: 137 VALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFINLGNKAAGVL 190

[Close]
BLAST of Csa3G116630 vs. TAIR10
Match: AT2G35960.1 (AT2G35960.1 NDR1/HIN1-like 12)

HSP 1 Score: 120.9 bits (302), Expect = 9.7e-28
Identity = 58/168 (34.52%), Postives = 93/168 (55.36%), Query Frame = 1 

Query: 35  TRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTI 94
           T   +C  I  F++++ +    +W++ +P  P+F +  A +Y  N+S   LL++  Q TI
Sbjct: 17  TASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITI 76

Query: 95  VTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLE 154
            +RN N R+ IYYDRL V+ +YRNQQIT +  +PP     +     SP + G +V ++  
Sbjct: 77  ASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPF 136

Query: 155 VANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGV 203
            A  L  +Q  G + L +   GR+RWK G L TG+Y ++V+C   + +
Sbjct: 137 NAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINL 184

[Close]
BLAST of Csa3G116630 vs. TAIR10
Match: AT5G06330.1 (AT5G06330.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 120.9 bits (302), Expect = 9.7e-28
Identity = 70/196 (35.71%), Postives = 106/196 (54.08%), Query Frame = 1 

Query: 31  YSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLP--LLST 90
           +S   R+ V   ISI LL+I VV L +W + +P  P+F +  A +++ N+S  P  LL++
Sbjct: 12  HSSCNRKIVIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNVSGNPPNLLTS 71

Query: 91  TMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGA 150
             QFT+ +RNPN ++ IYYDRL V+ SYR+QQIT    +       +     SP +GG +
Sbjct: 72  NFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVNVWSPFVGGYS 131

Query: 151 VAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVG 210
           V V+   A  L  D + G + L + L GR+RWK G   TG+Y ++V+C  L+       G
Sbjct: 132 VPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHALINFGSSAAG 191

Query: 211 QL--PMLASPPCKVDI 223
            +    + +  C V +
Sbjct: 192 VIVGKYMLTETCSVSV 207

[Close]
BLAST of Csa3G116630 vs. TAIR10
Match: AT4G09590.1 (AT4G09590.1 NDR1/HIN1-like 22)

HSP 1 Score: 114.8 bits (286), Expect = 7.0e-26
Identity = 55/162 (33.95%), Postives = 87/162 (53.70%), Query Frame = 1 

Query: 39  VCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRN 98
           +C  I  F++++ +    +W++ +P +P+F +    +Y  N+S   LL++  Q TI +RN
Sbjct: 22  ICGAIIGFIIIVLMTIFLVWIILQPKNPEFILQDTTVYAFNLSQPNLLTSKFQITIASRN 81

Query: 99  PNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANG 158
            N  + IYYD L  + SYRNQQIT    LPP     +     SP+L G  V ++   A  
Sbjct: 82  RNSNIGIYYDHLHAYASYRNQQITLASDLPPTYQRHKEDSVWSPLLYGNQVPIAPFNAVA 141

Query: 159 LVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLV 201
           L  +Q  GV  L + + G++RWK G L  G Y ++V+C   +
Sbjct: 142 LGDEQNSGVFTLTICVDGQVRWKVGTLTIGNYHLHVRCQAFI 183

[Close]
BLAST of Csa3G116630 vs. NCBI nr
Match: gi|449431934|ref|XP_004133755.1| (PREDICTED: protein YLS9-like [Cucumis sativus])

HSP 1 Score: 438.0 bits (1125), Expect = 1.0e-119
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1 

Query: 1   MAERNEEQGDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLV 60
           MAERNEEQGDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLV
Sbjct: 1   MAERNEEQGDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLV 60

Query: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQ 120
           YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQ
Sbjct: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQ 120

Query: 121 ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW 180
           ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW
Sbjct: 121 ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW 180

Query: 181 KAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI 223
           KAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI
Sbjct: 181 KAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI 222

[Close]
BLAST of Csa3G116630 vs. NCBI nr
Match: gi|659074695|ref|XP_008437747.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 423.3 bits (1087), Expect = 2.6e-115
Identity = 212/222 (95.50%), Postives = 219/222 (98.65%), Query Frame = 1 

Query: 1   MAERNEEQGDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLV 60
           MAERNEEQ DVH+++DLKEEKNRARFS RYYSK TRRSVCACISIFLL+IGVVALTLWLV
Sbjct: 1   MAERNEEQDDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLV 60

Query: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQ 120
           YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLT+FVSYRNQQ
Sbjct: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQ 120

Query: 121 ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW 180
           ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW
Sbjct: 121 ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW 180

Query: 181 KAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI 223
           KAGPLKTGRY+VYVKCDVL+GVKRGLVGQLPMLASPPCKVDI
Sbjct: 181 KAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 222

[Close]
BLAST of Csa3G116630 vs. NCBI nr
Match: gi|596005536|ref|XP_007218377.1| (hypothetical protein PRUPE_ppa011309mg [Prunus persica])

HSP 1 Score: 288.1 bits (736), Expect = 1.3e-74
Identity = 143/210 (68.10%), Postives = 164/210 (78.10%), Query Frame = 1 

Query: 13  DQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVG 72
           D K     K R   SS  Y+    RS+C C+SIFLL+ GV ALTLWLVYRP  PQFTVVG
Sbjct: 6   DHKKNPTTKKRYMASSPIYTSGPYRSICTCLSIFLLLAGVTALTLWLVYRPHKPQFTVVG 65

Query: 73  AAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAH 132
           AA+YDLN +S PL+STTMQFT+VT NPNRRVSIYYDRL  FVSY+NQ IT QV LP L H
Sbjct: 66  AAVYDLNATSPPLISTTMQFTLVTHNPNRRVSIYYDRLYAFVSYKNQAITPQVALPSLVH 125

Query: 133 EKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSV 192
           E RSTVA+SPVLGG AV VSLEV NGL  D+  GV+GLRVV++GRLRWKAG ++T  Y V
Sbjct: 126 EHRSTVAVSPVLGGRAVPVSLEVVNGLTMDEAYGVVGLRVVVMGRLRWKAGAIRTAHYGV 185

Query: 193 YVKCDVLVGVKRGLVGQLPMLASPPCKVDI 223
           YVKCDVLVG+KRG VGQ+P+L +P C+VDI
Sbjct: 186 YVKCDVLVGLKRGFVGQVPLLGNPSCQVDI 215

[Close]
BLAST of Csa3G116630 vs. NCBI nr
Match: gi|645284125|ref|XP_008245646.1| (PREDICTED: protein YLS9 [Prunus mume])

HSP 1 Score: 287.3 bits (734), Expect = 2.2e-74
Identity = 143/210 (68.10%), Postives = 163/210 (77.62%), Query Frame = 1 

Query: 13  DQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVG 72
           D K     K R   SS  Y     RS+C C+SIFLL+ GV ALTLWLVYRP  PQFTVVG
Sbjct: 22  DHKKNPTTKKRYMASSPIYPSGPYRSICTCLSIFLLLAGVTALTLWLVYRPHKPQFTVVG 81

Query: 73  AAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAH 132
           AA+YDLN +S PL+STTMQFT+VT NPNRRVSIYYDRL  FVSY+NQ IT QV LP L H
Sbjct: 82  AAVYDLNATSPPLISTTMQFTLVTHNPNRRVSIYYDRLYAFVSYKNQAITPQVALPSLVH 141

Query: 133 EKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSV 192
           E RSTVA+SPVLGG AV VSLEV NGL  D+  GV+GLRVV++GRLRWKAG ++T  Y V
Sbjct: 142 EHRSTVAVSPVLGGRAVPVSLEVVNGLTMDEAYGVVGLRVVVMGRLRWKAGAIRTAHYGV 201

Query: 193 YVKCDVLVGVKRGLVGQLPMLASPPCKVDI 223
           YVKCDVLVG+KRG VGQ+P+L +P C+VDI
Sbjct: 202 YVKCDVLVGLKRGFVGQVPLLGNPSCQVDI 231

[Close]
BLAST of Csa3G116630 vs. NCBI nr
Match: gi|694380987|ref|XP_009366593.1| (PREDICTED: protein YLS9 [Pyrus x bretschneideri])

HSP 1 Score: 285.0 bits (728), Expect = 1.1e-73
Identity = 134/186 (72.04%), Postives = 160/186 (86.02%), Query Frame = 1 

Query: 37  RSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVT 96
           R++C C+SIFLL+ GV ALTLWLVYRP  PQFT+VGAA+Y LN++S PL+STTMQFTIVT
Sbjct: 28  RALCTCLSIFLLLAGVTALTLWLVYRPHKPQFTIVGAAVYSLNVTSPPLISTTMQFTIVT 87

Query: 97  RNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVA 156
           RNPNRRVSIYYDRL+ FV+Y+NQ IT QV LPPL HE RSTVA+SPVLGGG V V++EV 
Sbjct: 88  RNPNRRVSIYYDRLSAFVAYKNQAITPQVTLPPLVHEHRSTVAVSPVLGGGEVPVAVEVV 147

Query: 157 NGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASP 216
           NGLV D+  GV+GLRVV+ GRLRWKAG ++TG Y +YVKCDVLVG+K+G VGQ+P+L +P
Sbjct: 148 NGLVMDEVYGVVGLRVVVTGRLRWKAGAIRTGHYGIYVKCDVLVGLKKGFVGQVPLLGNP 207

Query: 217 PCKVDI 223
            CKVDI
Sbjct: 208 ACKVDI 213

The following BLAST results are available for this feature:
BLAST of Csa3G116630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NHL12_ARATH1.7e-2634.52NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1[more]
YLS9_ARATH3.7e-1327.93Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1[more]
NHL3_ARATH1.7e-1027.27NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1[more]
BLAST of Csa3G116630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L882_CUCSA7.1e-120100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116630 PE=4 SV=1[more]
M5X269_PRUPE9.1e-7568.10Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011309mg PE=4 SV=1[more]
B9RNK9_RICCO4.7e-7160.91Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1339920 PE=4 SV=1[more]
A5BJJ5_VITVI2.6e-6968.72Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027904 PE=4 SV=1[more]
F6I2Y6_VITVI4.4e-6968.72Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02530 PE=4 SV=... [more]
BLAST of Csa3G116630 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G01410.11.0e-5654.01 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT3G52470.11.5e-2833.91 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT2G35960.19.7e-2834.52 NDR1/HIN1-like 12[more]
AT5G06330.19.7e-2835.71 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT4G09590.17.0e-2633.95 NDR1/HIN1-like 22[more]
BLAST of Csa3G116630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449431934|ref|XP_004133755.1|1.0e-119100.00PREDICTED: protein YLS9-like [Cucumis sativus][more]
gi|659074695|ref|XP_008437747.1|2.6e-11595.50PREDICTED: protein YLS9-like [Cucumis melo][more]
gi|596005536|ref|XP_007218377.1|1.3e-7468.10hypothetical protein PRUPE_ppa011309mg [Prunus persica][more]
gi|645284125|ref|XP_008245646.1|2.2e-7468.10PREDICTED: protein YLS9 [Prunus mume][more]
gi|694380987|ref|XP_009366593.1|1.1e-7372.04PREDICTED: protein YLS9 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000160 phosphorelay signal transduction system
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005622 intracellular
cellular_component GO:0044464 cell part
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU087937cucumber EST collection version 3.0transcribed_cluster
CU118306cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G116630.1Csa3G116630.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU087937CU087937transcribed_cluster
CU118306CU118306transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 97..196
score: 9.
NoneNo IPR availablePANTHERPTHR31415FAMILY NOT NAMEDcoord: 8..222
score: 4.1E
NoneNo IPR availablePANTHERPTHR31415:SF9SUBFAMILY NOT NAMEDcoord: 8..222
score: 4.1E