MELO3C005927 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005927
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	chr6 : 15962 .. 16818 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCTGTAAGAGCACAGGGACTGGATTTTTTCTTTCGGAAACCCTCCCTCTTTGGATATTAGTCCAGCCATGGCAGAAAGAAACGAAGAGCAAGACGATGTCCATAACAAGAGGGATTTGAAAGAAGAAAAGAACAGAGCAAGATTCTCGCACCGATACTACTCGAAAAGCACTCGCCGCTCTGTTTGCGCATGCATCTCCATCTTCCTCCTCATAATTGGTGTCGTGGCTCTCACTCTGTGGCTTGTCTACCGCCCCATTGATCCTCAATTCACGGTGGTTGGAGCCGCAATATATGACCTCAACATGTCATCTCTGCCGCTGCTGTCTACAACCATGCAATTCACAATCGTTACGAGGAACCCCAACAGGCGAGTTTCCATTTATTATGACAGACTGACTATCTTTGTGTCGTATAGGAACCAGCAGATAACGTCGCAGGTGATATTGCCTCCGCTGGCTCACGAAAAGCGAAGCACAGTTGCGATGTCTCCAGTACTAGGTGGTGGGGCGGTGGCAGTGTCGTTGGAGGTGGCAAATGGGTTGGTAACGGATCAAACAATTGGAGTTCTAGGGTTGAGAGTAGTGTTGTTGGGTAGACTAAGATGGAAAGCTGGGCCACTAAAGACTGGACGTTATGCAGTATATGTAAAATGTGATGTGTTGATGGGTGTGAAAAGAGGCTTGGTGGGTCAACTTCCTATGCTTGCTTCTCCCCCTTGCAAAGTTGATATCTAGTTTTTCATTATTGATTACCAATAATTGCTTACCCTATCTTCTCCCAAATGTTAATGTAAATATCAAATTAAATTTCCTAGATTAAGTTTTTGGGTCTGGTCAAAGCATTCTTGAGTTC

mRNA sequence

TTTTCTGTAAGAGCACAGGGACTGGATTTTTTCTTTCGGAAACCCTCCCTCTTTGGATATTAGTCCAGCCATGGCAGAAAGAAACGAAGAGCAAGACGATGTCCATAACAAGAGGGATTTGAAAGAAGAAAAGAACAGAGCAAGATTCTCGCACCGATACTACTCGAAAAGCACTCGCCGCTCTGTTTGCGCATGCATCTCCATCTTCCTCCTCATAATTGGTGTCGTGGCTCTCACTCTGTGGCTTGTCTACCGCCCCATTGATCCTCAATTCACGGTGGTTGGAGCCGCAATATATGACCTCAACATGTCATCTCTGCCGCTGCTGTCTACAACCATGCAATTCACAATCGTTACGAGGAACCCCAACAGGCGAGTTTCCATTTATTATGACAGACTGACTATCTTTGTGTCGTATAGGAACCAGCAGATAACGTCGCAGGTGATATTGCCTCCGCTGGCTCACGAAAAGCGAAGCACAGTTGCGATGTCTCCAGTACTAGGTGGTGGGGCGGTGGCAGTGTCGTTGGAGGTGGCAAATGGGTTGGTAACGGATCAAACAATTGGAGTTCTAGGGTTGAGAGTAGTGTTGTTGGGTAGACTAAGATGGAAAGCTGGGCCACTAAAGACTGGACGTTATGCAGTATATGTAAAATGTGATGTGTTGATGGGTGTGAAAAGAGGCTTGGTGGGTCAACTTCCTATGCTTGCTTCTCCCCCTTGCAAAGTTGATATCTAGTTTTTCATTATTGATTACCAATAATTGCTTACCCTATCTTCTCCCAAATGTTAATGTAAATATCAAATTAAATTTCCTAGATTAAGTTTTTGGGTCTGGTCAAAGCATTCTTGAGTTC

Coding sequence (CDS)

ATGGCAGAAAGAAACGAAGAGCAAGACGATGTCCATAACAAGAGGGATTTGAAAGAAGAAAAGAACAGAGCAAGATTCTCGCACCGATACTACTCGAAAAGCACTCGCCGCTCTGTTTGCGCATGCATCTCCATCTTCCTCCTCATAATTGGTGTCGTGGCTCTCACTCTGTGGCTTGTCTACCGCCCCATTGATCCTCAATTCACGGTGGTTGGAGCCGCAATATATGACCTCAACATGTCATCTCTGCCGCTGCTGTCTACAACCATGCAATTCACAATCGTTACGAGGAACCCCAACAGGCGAGTTTCCATTTATTATGACAGACTGACTATCTTTGTGTCGTATAGGAACCAGCAGATAACGTCGCAGGTGATATTGCCTCCGCTGGCTCACGAAAAGCGAAGCACAGTTGCGATGTCTCCAGTACTAGGTGGTGGGGCGGTGGCAGTGTCGTTGGAGGTGGCAAATGGGTTGGTAACGGATCAAACAATTGGAGTTCTAGGGTTGAGAGTAGTGTTGTTGGGTAGACTAAGATGGAAAGCTGGGCCACTAAAGACTGGACGTTATGCAGTATATGTAAAATGTGATGTGTTGATGGGTGTGAAAAGAGGCTTGGTGGGTCAACTTCCTATGCTTGCTTCTCCCCCTTGCAAAGTTGATATCTAG

Protein sequence

MAERNEEQDDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI*

Homology

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BLAST of MELO3C005927 vs. Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.8e-26
Identity = 58/168 (34.52%), Postives = 93/168 (55.36%), Query Frame = 1


Query: 35  TRRSVCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTI 94
           T   +C  I  F++I+ +    +W++ +P  P+F +  A +Y  N+S   LL++  Q TI
Sbjct: 17  TASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITI 76

Query: 95  VTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLE 154
            +RN N R+ IYYDRL ++ +YRNQQIT +  +PP     +     SP + G +V ++  
Sbjct: 77  ASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPF 136

Query: 155 VANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVLMGV 203
            A  L  +Q  G + L +   GR+RWK G L TG+Y ++V+C   + +
Sbjct: 137 NAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINL 184

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BLAST of MELO3C005927 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-13
Identity = 51/179 (28.49%), Postives = 82/179 (45.81%), Query Frame = 1


Query: 30  YYSKSTRRSV-CACISIF-------LLIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMS 89
           YY +   R   C  +S+F       ++I+GV AL  WL+ RP   +F V  A++   + +
Sbjct: 24  YYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHT 83

Query: 90  SLP-LLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAM 149
           S   +L   +  T+  RNPN+R+ +YYDR+     Y  ++ ++  + P     K +TV  
Sbjct: 84  SPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLT 143

Query: 150 SPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVL 200
               G   V  +   +  L  ++  GV  + +    R+R+K G LK  R    V CD L
Sbjct: 144 PTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDL 202

[Close]

BLAST of MELO3C005927 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.9e-10
Identity = 40/152 (26.32%), Postives = 71/152 (46.71%), Query Frame = 1


Query: 48  LIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYY 107
           +++G+ AL +WL++RP   +F V  A + +  +     L   +      RNPNRR+ +YY
Sbjct: 57  VLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYY 116

Query: 108 DRLTIFVSYRNQQI-TSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIG 167
           D + +   Y +Q+   S  I       K +TV  + ++G   V +       L  D    
Sbjct: 117 DEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQ 176

Query: 168 VLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDV 199
           +  +   L  ++R+K G +K+ R+   +KCD+
Sbjct: 177 IYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDL 208

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BLAST of MELO3C005927 vs. TrEMBL
Match: A0A0A0L882_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116630 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.8e-115
Identity = 212/222 (95.50%), Postives = 219/222 (98.65%), Query Frame = 1


Query: 1   MAERNEEQDDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLV 60
           MAERNEEQ DVH+++DLKEEKNRARFS RYYSK TRRSVCACISIFLL+IGVVALTLWLV
Sbjct: 1   MAERNEEQGDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLV 60

Query: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQ 120
           YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLT+FVSYRNQQ
Sbjct: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQ 120

Query: 121 ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW 180
           ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW
Sbjct: 121 ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW 180

Query: 181 KAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 223
           KAGPLKTGRY+VYVKCDVL+GVKRGLVGQLPMLASPPCKVDI
Sbjct: 181 KAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI 222

[Close]

BLAST of MELO3C005927 vs. TrEMBL
Match: M5X269_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011309mg PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 7.7e-74
Identity = 143/217 (65.90%), Postives = 166/217 (76.50%), Query Frame = 1


Query: 6   EEQDDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLVYRPID 65
           EE+D   N       K R   S   Y+    RS+C C+SIFLL+ GV ALTLWLVYRP  
Sbjct: 3   EEEDHKKNPTT----KKRYMASSPIYTSGPYRSICTCLSIFLLLAGVTALTLWLVYRPHK 62

Query: 66  PQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQV 125
           PQFTVVGAA+YDLN +S PL+STTMQFT+VT NPNRRVSIYYDRL  FVSY+NQ IT QV
Sbjct: 63  PQFTVVGAAVYDLNATSPPLISTTMQFTLVTHNPNRRVSIYYDRLYAFVSYKNQAITPQV 122

Query: 126 ILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPL 185
            LP L HE RSTVA+SPVLGG AV VSLEV NGL  D+  GV+GLRVV++GRLRWKAG +
Sbjct: 123 ALPSLVHEHRSTVAVSPVLGGRAVPVSLEVVNGLTMDEAYGVVGLRVVVMGRLRWKAGAI 182

Query: 186 KTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 223
           +T  Y VYVKCDVL+G+KRG VGQ+P+L +P C+VDI
Sbjct: 183 RTAHYGVYVKCDVLVGLKRGFVGQVPLLGNPSCQVDI 215

[Close]

BLAST of MELO3C005927 vs. TrEMBL
Match: B9RNK9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1339920 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-70
Identity = 132/226 (58.41%), Postives = 172/226 (76.11%), Query Frame = 1


Query: 1   MAERNEEQDDVHNKRDLKEEKNRARFSHRY----YSKSTRRSVCACISIFLLIIGVVALT 60
           MAE  + +++   +  + +EK+     H      Y    RR++C  I+IFLL+ G+    
Sbjct: 1   MAEDQKPEENHQTQSQVTDEKHHQPQKHMSPPPSYKSDPRRTICTVITIFLLLAGLAVFI 60

Query: 61  LWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSY 120
           +WL+YRP  P+FTV+GAAIYDLN +S P +S +MQFTIVTRNPN+RV+I YD+L+ +VSY
Sbjct: 61  VWLIYRPHKPRFTVLGAAIYDLNTTSPPFVSASMQFTIVTRNPNKRVAIIYDKLSAYVSY 120

Query: 121 RNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLG 180
           RNQ IT  V+LPPL H+K+STVA+SPVLGG  V VS+EVANGLV D++ GV+ LRVVLLG
Sbjct: 121 RNQAITPTVVLPPLYHDKKSTVALSPVLGGAQVPVSVEVANGLVMDESYGVVALRVVLLG 180

Query: 181 RLRWKAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 223
           RLRWKAG +KTGRY VYVKCD+ +G+KRGLVGQ+P+L SP CKVD+
Sbjct: 181 RLRWKAGVIKTGRYGVYVKCDIWVGLKRGLVGQVPLLGSPQCKVDV 226

[Close]

BLAST of MELO3C005927 vs. TrEMBL
Match: A5BJJ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027904 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 5.7e-69
Identity = 132/193 (68.39%), Postives = 154/193 (79.79%), Query Frame = 1


Query: 30  YYSKSTRRSVCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTT 89
           Y  K  RR+ C  I I LL+ G+ AL +WLVYRP +PQFTV+G AIYDLN +S PL+ST 
Sbjct: 799 YRPKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQFTVMGVAIYDLNTTSPPLISTN 858

Query: 90  MQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAV 149
           MQFTIVTRNPN+RVSIYYDRL+ FVSYRNQ IT   +LPPL H K STVA+SPVLGG AV
Sbjct: 859 MQFTIVTRNPNKRVSIYYDRLSAFVSYRNQAITPPAMLPPLYHRKHSTVALSPVLGGEAV 918

Query: 150 AVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVLMGVKRGLVGQ 209
            VSLEVANGLV D+  GV+GLR+VLLGRL+WKAG   +  Y VYVKCDVL+G+K+G+VGQ
Sbjct: 919 PVSLEVANGLVMDEAYGVMGLRLVLLGRLKWKAGAFWSMHYGVYVKCDVLVGLKKGVVGQ 978

Query: 210 LPMLASPPCKVDI 223
           +PML SP C VDI
Sbjct: 979 VPMLGSPXCNVDI 991

[Close]

BLAST of MELO3C005927 vs. TrEMBL
Match: F6I2Y6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02530 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 9.7e-69
Identity = 132/193 (68.39%), Postives = 154/193 (79.79%), Query Frame = 1


Query: 30  YYSKSTRRSVCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTT 89
           Y  K  RR+ C  I I LL+ G+ AL +WLVYRP +PQFTV+G AIYDLN +S PL+ST 
Sbjct: 10  YRPKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQFTVMGVAIYDLNTTSPPLISTN 69

Query: 90  MQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAV 149
           MQFTIVTRNPN+RVSIYYDRL+ FVSYRNQ IT   +LPPL H K STVA+SPVLGG AV
Sbjct: 70  MQFTIVTRNPNKRVSIYYDRLSAFVSYRNQAITPPAMLPPLYHRKHSTVALSPVLGGEAV 129

Query: 150 AVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVLMGVKRGLVGQ 209
            VSLEVANGLV D+  GV+GLR+VLLGRL+WKAG   +  Y VYVKCDVL+G+K+G+VGQ
Sbjct: 130 PVSLEVANGLVMDEAYGVMGLRLVLLGRLKWKAGAFWSMHYGVYVKCDVLVGLKKGVVGQ 189

Query: 210 LPMLASPPCKVDI 223
           +PML SP C VDI
Sbjct: 190 VPMLGSPLCNVDI 202

[Close]

BLAST of MELO3C005927 vs. TAIR10
Match: AT4G01410.1 (AT4G01410.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 218.0 bits (554), Expect = 5.8e-57
Identity = 102/187 (54.55%), Postives = 139/187 (74.33%), Query Frame = 1


Query: 36  RRSVCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIV 95
           RR++C  I   L+I+G++AL LWLVYRP  P+ TVVGAAIYDLN ++ PL+ST++QF+++
Sbjct: 41  RRAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVL 100

Query: 96  TRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEV 155
            RNPNRRVSI+YD+L+++V+Y++Q IT  + LPPL    +STV ++PV+GG  + VS EV
Sbjct: 101 ARNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVSPEV 160

Query: 156 ANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLAS 215
           ANGL  D+  GV+ +RVV+ GRLRWKAG +KTGRY  Y +CDV +       GQ+P+LA 
Sbjct: 161 ANGLKNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDVWLRFNPSSNGQVPLLAP 220

Query: 216 PPCKVDI 223
             CKVD+
Sbjct: 221 STCKVDV 227

[Close]

BLAST of MELO3C005927 vs. TAIR10
Match: AT5G06330.1 (AT5G06330.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-28
Identity = 71/200 (35.50%), Postives = 108/200 (54.00%), Query Frame = 1


Query: 27  SHRYYSKSTRRSVCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLP-- 86
           SH  +S   R+ V   ISI LL+I VV L +W + +P  P+F +  A +++ N+S  P  
Sbjct: 8   SHDSHSSCNRKIVIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNVSGNPPN 67

Query: 87  LLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPVL 146
           LL++  QFT+ +RNPN ++ IYYDRL ++ SYR+QQIT    +       +     SP +
Sbjct: 68  LLTSNFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVNVWSPFV 127

Query: 147 GGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVLMGVKR 206
           GG +V V+   A  L  D + G + L + L GR+RWK G   TG+Y ++V+C  L+    
Sbjct: 128 GGYSVPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHALINFGS 187

Query: 207 GLVGQL--PMLASPPCKVDI 223
              G +    + +  C V +
Sbjct: 188 SAAGVIVGKYMLTETCSVSV 207

[Close]

BLAST of MELO3C005927 vs. TAIR10
Match: AT3G52470.1 (AT3G52470.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 122.5 bits (306), Expect = 3.3e-28
Identity = 59/174 (33.91%), Postives = 95/174 (54.60%), Query Frame = 1


Query: 37  RSVCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVT 96
           R +CA I  F++I+ +    +W++ RP  P+F +  A +Y  N+S   LL++  Q TI +
Sbjct: 17  RKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTIAS 76

Query: 97  RNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVA 156
           RNPN ++ IYYDRL ++ +Y NQQIT +  +PP     +     SP + G AV ++   +
Sbjct: 77  RNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNS 136

Query: 157 NGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVLMGVKRGLVGQL 211
             L  ++  G +GL +   G +RWK   L TG+Y ++V+C   + +     G L
Sbjct: 137 VALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFINLGNKAAGVL 190

[Close]

BLAST of MELO3C005927 vs. TAIR10
Match: AT2G35960.1 (AT2G35960.1 NDR1/HIN1-like 12)

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27
Identity = 58/168 (34.52%), Postives = 93/168 (55.36%), Query Frame = 1


Query: 35  TRRSVCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTI 94
           T   +C  I  F++I+ +    +W++ +P  P+F +  A +Y  N+S   LL++  Q TI
Sbjct: 17  TASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITI 76

Query: 95  VTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLE 154
            +RN N R+ IYYDRL ++ +YRNQQIT +  +PP     +     SP + G +V ++  
Sbjct: 77  ASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPF 136

Query: 155 VANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVLMGV 203
            A  L  +Q  G + L +   GR+RWK G L TG+Y ++V+C   + +
Sbjct: 137 NAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINL 184

[Close]

BLAST of MELO3C005927 vs. TAIR10
Match: AT4G09590.1 (AT4G09590.1 NDR1/HIN1-like 22)

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25
Identity = 56/162 (34.57%), Postives = 87/162 (53.70%), Query Frame = 1


Query: 39  VCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRN 98
           +C  I  F++I+ +    +W++ +P +P+F +    +Y  N+S   LL++  Q TI +RN
Sbjct: 22  ICGAIIGFIIIVLMTIFLVWIILQPKNPEFILQDTTVYAFNLSQPNLLTSKFQITIASRN 81

Query: 99  PNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANG 158
            N  + IYYD L  + SYRNQQIT    LPP     +     SP+L G  V ++   A  
Sbjct: 82  RNSNIGIYYDHLHAYASYRNQQITLASDLPPTYQRHKEDSVWSPLLYGNQVPIAPFNAVA 141

Query: 159 LVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVLM 201
           L  +Q  GV  L + + G++RWK G L  G Y ++V+C   +
Sbjct: 142 LGDEQNSGVFTLTICVDGQVRWKVGTLTIGNYHLHVRCQAFI 183

[Close]

BLAST of MELO3C005927 vs. NCBI nr
Match: gi|659074695|ref|XP_008437747.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 439.5 bits (1129), Expect = 3.5e-120
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1


Query: 1   MAERNEEQDDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLV 60
           MAERNEEQDDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLV
Sbjct: 1   MAERNEEQDDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLV 60

Query: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQ 120
           YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQ
Sbjct: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQ 120

Query: 121 ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW 180
           ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW
Sbjct: 121 ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW 180

Query: 181 KAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 223
           KAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI
Sbjct: 181 KAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 222

[Close]

BLAST of MELO3C005927 vs. NCBI nr
Match: gi|449431934|ref|XP_004133755.1| (PREDICTED: protein YLS9-like [Cucumis sativus])

HSP 1 Score: 423.3 bits (1087), Expect = 2.6e-115
Identity = 212/222 (95.50%), Postives = 219/222 (98.65%), Query Frame = 1


Query: 1   MAERNEEQDDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLV 60
           MAERNEEQ DVH+++DLKEEKNRARFS RYYSK TRRSVCACISIFLL+IGVVALTLWLV
Sbjct: 1   MAERNEEQGDVHDQKDLKEEKNRARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLV 60

Query: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQ 120
           YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLT+FVSYRNQQ
Sbjct: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQ 120

Query: 121 ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW 180
           ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW
Sbjct: 121 ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW 180

Query: 181 KAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 223
           KAGPLKTGRY+VYVKCDVL+GVKRGLVGQLPMLASPPCKVDI
Sbjct: 181 KAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI 222

[Close]

BLAST of MELO3C005927 vs. NCBI nr
Match: gi|596005536|ref|XP_007218377.1| (hypothetical protein PRUPE_ppa011309mg [Prunus persica])

HSP 1 Score: 285.0 bits (728), Expect = 1.1e-73
Identity = 143/217 (65.90%), Postives = 166/217 (76.50%), Query Frame = 1


Query: 6   EEQDDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLVYRPID 65
           EE+D   N       K R   S   Y+    RS+C C+SIFLL+ GV ALTLWLVYRP  
Sbjct: 3   EEEDHKKNPTT----KKRYMASSPIYTSGPYRSICTCLSIFLLLAGVTALTLWLVYRPHK 62

Query: 66  PQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQV 125
           PQFTVVGAA+YDLN +S PL+STTMQFT+VT NPNRRVSIYYDRL  FVSY+NQ IT QV
Sbjct: 63  PQFTVVGAAVYDLNATSPPLISTTMQFTLVTHNPNRRVSIYYDRLYAFVSYKNQAITPQV 122

Query: 126 ILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPL 185
            LP L HE RSTVA+SPVLGG AV VSLEV NGL  D+  GV+GLRVV++GRLRWKAG +
Sbjct: 123 ALPSLVHEHRSTVAVSPVLGGRAVPVSLEVVNGLTMDEAYGVVGLRVVVMGRLRWKAGAI 182

Query: 186 KTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 223
           +T  Y VYVKCDVL+G+KRG VGQ+P+L +P C+VDI
Sbjct: 183 RTAHYGVYVKCDVLVGLKRGFVGQVPLLGNPSCQVDI 215

[Close]

BLAST of MELO3C005927 vs. NCBI nr
Match: gi|645284125|ref|XP_008245646.1| (PREDICTED: protein YLS9 [Prunus mume])

HSP 1 Score: 284.6 bits (727), Expect = 1.4e-73
Identity = 143/222 (64.41%), Postives = 167/222 (75.23%), Query Frame = 1


Query: 1   MAERNEEQDDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLV 60
           + +  EE+D   N       K R   S   Y     RS+C C+SIFLL+ GV ALTLWLV
Sbjct: 14  LPKMTEEEDHKKNPTT----KKRYMASSPIYPSGPYRSICTCLSIFLLLAGVTALTLWLV 73

Query: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQ 120
           YRP  PQFTVVGAA+YDLN +S PL+STTMQFT+VT NPNRRVSIYYDRL  FVSY+NQ 
Sbjct: 74  YRPHKPQFTVVGAAVYDLNATSPPLISTTMQFTLVTHNPNRRVSIYYDRLYAFVSYKNQA 133

Query: 121 ITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRW 180
           IT QV LP L HE RSTVA+SPVLGG AV VSLEV NGL  D+  GV+GLRVV++GRLRW
Sbjct: 134 ITPQVALPSLVHEHRSTVAVSPVLGGRAVPVSLEVVNGLTMDEAYGVVGLRVVVMGRLRW 193

Query: 181 KAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 223
           KAG ++T  Y VYVKCDVL+G+KRG VGQ+P+L +P C+VDI
Sbjct: 194 KAGAIRTAHYGVYVKCDVLVGLKRGFVGQVPLLGNPSCQVDI 231

[Close]

BLAST of MELO3C005927 vs. NCBI nr
Match: gi|694380987|ref|XP_009366593.1| (PREDICTED: protein YLS9 [Pyrus x bretschneideri])

HSP 1 Score: 283.9 bits (725), Expect = 2.5e-73
Identity = 133/186 (71.51%), Postives = 160/186 (86.02%), Query Frame = 1


Query: 37  RSVCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVT 96
           R++C C+SIFLL+ GV ALTLWLVYRP  PQFT+VGAA+Y LN++S PL+STTMQFTIVT
Sbjct: 28  RALCTCLSIFLLLAGVTALTLWLVYRPHKPQFTIVGAAVYSLNVTSPPLISTTMQFTIVT 87

Query: 97  RNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVA 156
           RNPNRRVSIYYDRL+ FV+Y+NQ IT QV LPPL HE RSTVA+SPVLGGG V V++EV 
Sbjct: 88  RNPNRRVSIYYDRLSAFVAYKNQAITPQVTLPPLVHEHRSTVAVSPVLGGGEVPVAVEVV 147

Query: 157 NGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASP 216
           NGLV D+  GV+GLRVV+ GRLRWKAG ++TG Y +YVKCDVL+G+K+G VGQ+P+L +P
Sbjct: 148 NGLVMDEVYGVVGLRVVVTGRLRWKAGAIRTGHYGIYVKCDVLVGLKKGFVGQVPLLGNP 207

Query: 217 PCKVDI 223
            CKVDI
Sbjct: 208 ACKVDI 213

The following BLAST results are available for this feature:

BLAST of MELO3C005927 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NHL12_ARATH	3.8e-26	34.52	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1	[more]
YLS9_ARATH	2.9e-13	28.49	Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1	[more]
NHL3_ARATH	3.9e-10	26.32	NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1	[more]

BLAST of MELO3C005927 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L882_CUCSA	1.8e-115	95.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116630 PE=4 SV=1	[more]
M5X269_PRUPE	7.7e-74	65.90	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011309mg PE=4 SV=1	[more]
B9RNK9_RICCO	1.8e-70	58.41	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1339920 PE=4 SV=1	[more]
A5BJJ5_VITVI	5.7e-69	68.39	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027904 PE=4 SV=1	[more]
F6I2Y6_VITVI	9.7e-69	68.39	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02530 PE=4 SV=...	[more]

BLAST of MELO3C005927 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G01410.1	5.8e-57	54.55	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT5G06330.1	1.5e-28	35.50	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT3G52470.1	3.3e-28	33.91	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT2G35960.1	2.2e-27	34.52	NDR1/HIN1-like 12	[more]
AT4G09590.1	1.6e-25	34.57	NDR1/HIN1-like 22	[more]

BLAST of MELO3C005927 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074695\|ref\|XP_008437747.1\|	3.5e-120	100.00	PREDICTED: protein YLS9-like [Cucumis melo]	[more]
gi\|449431934\|ref\|XP_004133755.1\|	2.6e-115	95.50	PREDICTED: protein YLS9-like [Cucumis sativus]	[more]
gi\|596005536\|ref\|XP_007218377.1\|	1.1e-73	65.90	hypothetical protein PRUPE_ppa011309mg [Prunus persica]	[more]
gi\|645284125\|ref\|XP_008245646.1\|	1.4e-73	64.41	PREDICTED: protein YLS9 [Prunus mume]	[more]
gi\|694380987\|ref\|XP_009366593.1\|	2.5e-73	71.51	PREDICTED: protein YLS9 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0044464	cell part
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU52188	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005927T1	MELO3C005927T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU52188	MU52188	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 97..196 score: 2.
None	No IPR available	PANTHER	PTHR31415	FAMILY NOT NAMED	coord: 5..222 score: 1.3E
None	No IPR available	PANTHER	PTHR31415:SF9	SUBFAMILY NOT NAMED	coord: 5..222 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005927	Csa3G116630	Cucumber (Chinese Long) v2	cumeB236
MELO3C005927	Cla021058	Watermelon (97103) v1	mewmB461
MELO3C005927	Cla97C05G079920	Watermelon (97103) v2	mewmbB434
MELO3C005927	Cucsa.260120	Cucumber (Gy14) v1	cgymeB439
MELO3C005927	CmaCh06G009120	Cucurbita maxima (Rimu)	cmameB766
MELO3C005927	CmoCh06G009520	Cucurbita moschata (Rifu)	cmomeB755
MELO3C005927	Cp4.1LG08g00120	Cucurbita pepo (Zucchini)	cpemeB815
MELO3C005927	CsGy3G007130	Cucumber (Gy14) v2	cgybmeB200
MELO3C005927	CsaV3_3G007080	Cucumber (Chinese Long) v3	cucmeB236

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005927	Wax gourd	mewgoB540
MELO3C005927	Wild cucumber (PI 183967)	cpimeB230
MELO3C005927	Watermelon (Charleston Gray)	mewcgB427
MELO3C005927	Bottle gourd (USVL1VR-Ls)	lsimeB378