Cucsa.148030 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.148030
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionProtein thf1
Locationscaffold01107 : 285862 .. 288889 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCCTTCTCTTCTTTCTTCCTTCTTTCTCTTTCTCTTTCTTTCTTTCTAAAAAATTTCTTCGAATTTCATTTTCTATTCCTTTTTtCTCCCTCTCTTCTTCGATATGAAATCCATTTTCTCCATAAATTCCTAAGCTTCGCAGATTTTTtCCTCATTCTTCTTCAATGGCGGCTGTTAATTCCATTTCATTCTCTACACTAAACCAATGTTCCGATAGGAGATTGCTGCTTCCCTCCTCTCGTTCGCACTCCTCCAATTTCCACGGCTTTCCTTTTCGTACTAGCGTTTTCACTCATTATTCCCGAGTACGAGCATCCACCTTCAGTTCTCGCATGGTCATTCATTGCATGTCCGCCGGAACAGGTAGCTTCTACCTCTGGTTATTTATTTTCCTTACTTGCTTAATTTGACTATTCCGATTAAGTTAGTGAATCTCTTGTTTTTTTTtTtTTTTTTTTttAGATTGAATGTTATAATGAGTATTAGAAGTTTTAAGTAACTATTAAGCTTCCAATAGTTCAGTTGGATCAGTTCTGTACTTGTGTAGTTTGTTGAGAGATTTCTCTAGTTCGTTTTCTTACTACTATAGGTTAGAAACTGATGCGCTATTTTGACGGCTCAGATGTGACCACTGTGGCCGAGACAAAATTGAACTTCCTTAAGGCCTATAAACGGCCTATCCCTAGTATTTACAACACGGTTCTGCAAGAATTGATTGTTCAGCAGCATTTGATGAGGTATAAGAGGACATACCGTTATGATCCTGTTTTCGCTCTTGGATTTGTTACTGTATATGATCAGCTTATGGAAGGGTACCCTAGCGATGAGGATCGTGAAGCCATCTTCCAAGCGTATATTAAGGCTTTGAATGAGGATCCAGAGCAATATAGGTTTGGCCATGTATTCCCCTTTGCTTTTACCATCTCTAATCTCTATCAATTGTTGTCACTTGTCAGCTAGAAACTTCAGTTGCCTTATTGTTAAGTTTAAAAATCACCAACACGATTCCCTTTGGCTGTCTAAATGACTAAATTGGATTTGTATTGAATGTTAGTGCATGCTCGAAAAGTAGTATTAGAGACTTTTATTTGTACCTAGTAAACAAATTTACGAATGTTCATTTTTTATATTTCAAAAAGGGTTTTCTTTATTTTAAGTAATAACTTTTGTTATATCATCCAGAATTGATGCTAAAAAATTTGAAGAGTGGGCTCGATCTCAGACTGCAGCTTCATTGGTTGAGTTTGCATCAAGAGAAGGAGAAGTTGAGAGTATTTTGAAGGACATTGCAGAAAGAGCAGGGAGCAAGGGGAATTTCAGTTACAGCCGATTTTTTGCTATTGGACTATTTCGTCTCCTTGAATTGGCAAATGCTACTGAGCCCAGTATCTTGGAAAAGGTTTCTTTAATATTCCTTTCTGTGATATAGCTTTTAAGTAGTTGAGATTTTGATGACATTCTTATCGAGTTGATTATAGCTAAATTAAATGACAGCCAGCCTCTCTTGTAGGACTTTTATCAATAGATGTTATCTCTGAGTGCTGCCATTAATAAAGTATAATAGTGTTTCTGGTTCATTAGTTTtCTTTTTACTCGTTAGAGAAATTGGATCTTGATGGAATATTGCCTAACATACTGTTCGAGACGAGAGAATTAGGTTCAAAGGCTTCTTTTGTGCATAAGGCTGCATTTTATTTTCTGGCTAACTAGTCTTTTGGAACATTTGTCTTTCCCCTTTCCTCCCTTGCCGCTGACCCATCACACACACACATACTATTGTCGGATTTCCTTTCACCCTTGTGAAGGCCGATTCTATTTACTGTGTCTATCACTGAAGATAAGATACTTTTGATCTCTTAAAACAGCTCAAGCTATGTAGTCGAACAGTTTATAAAACAGCAGAAGTCATATGATAGAGAATTAACCGGGTATTGAGATCTAATTTCTTGGTACTTCTGAACAGCTCTGTGCCGCTTTAAATATCGACAAAAAAGGTGTAGACCGAGACCTTGATGTATACCGTAACCTGCTTTCAAAGTTGGTTCAGGCGAAAGAGCTCCTAAAGGAATATGTCGACAGGTAAGAGACTGTTAAGTTCATGGTTCTAGGCATGGTAGATTAATATGCTCTTTAAAGCCCTCATATTTTCAGACTTTATGAAAATCTACAATCGAATTGAAAACTGTCTCAATCTTGTATTTGTGAAATCTCCTGCAAGTCACTATCATAGCATTTATATTCATTGGATCTTATCTGAGGTCTATATGAGGTAGACAATTGGGTGGATGATGGTGGTTGTAGGAGTAAGATTTAAAGGATAGAAGTTATATGATTAACCAGCGGGTTTTGAATTGTGTAGAGAGAAGAAGAAAAGAGATGAGAGGGCTGGATCACAGACAGCTAATGAGGCCATAACTAAATGCTTGGGAGAATACAGCATGCAGACTGGTTTATAAAAGGTAATTGGAGTCGCTACATAATTTGAGATAGACTTGAGAGAGTTTATAGCAACATTATTCTAAATACTTGTTAGATATGCATCTATAATGTATTATGTTGGGTCTCATGCATTTGGTAAATTTTGTATTCAGCCACGGCTCTACCTTTATTTCTCATTTGATATAACCACCACTCAAGCTATTTTTTAATCATTTGTATTACATACTTTGAGTGCAACTGTCAATACAAAATGCTTTCGCACTCTGTGCAGTAATCACTCCTCCAGGGATATTTGACCATCTGCCTTTTGTATTGTTATCCTTTCTGTATTATTCTGATATTTGGCTATTTGCTTTTGTATGATCTAAATTGTTTCAATTATAAACGTTTTACGATTTTAATTGATATAGTTAATAGTTTGGAGTTTTAACCCTAATTTAGAACCATCCTTTTGAAAATATGACCTTACTGGAACAGATCTGTTTTACAGGTGTGCTATTTCAATTGTGTAGACTTGTGAAGCTCAATACTAAAATTTATACTCTCCCGAAAAATTTTATGTTCTAATTCAGTTACCTAGTATACGTT

mRNA sequence

ACCCTTCTCttctttcttccttctttctctttctctttctttctttctAAAAAATTTCTTCGAATTTCATTTTCTATTCCTTTTTTCTCCCTCTCTTCTTCGATATGAAATCCATTTTCTCCATAAATTCCTAAGCTTCGCAGATTTTTTCCTCATTCTTCTTCAATGGCGGCTGTTAATTCCATTTCATTCTCTACACTAAACCAATGTTCCGATAGGAGATTGCTGCTTCCCTCCTCTCGTTCGCACTCCTCCAATTTCCACGGCTTTCCTTTTCGTACTAGCGTTTTCACTCATTATTCCCGAGTACGAGCATCCACCTTCAGTTCTCGCATGGTCATTCATTGCATGTCCGCCGGAACAGATGTGACCACTGTGGCCGAGACAAAATTGAACTTCCTTAAGGCCTATAAACGGCCTATCCCTAGTATTTACAACACGGTTCTGCAAGAATTGATTGTTCAGCAGCATTTGATGAGGTATAAGAGGACATACCGTTATGATCCTGTTTTCGCTCTTGGATTTGTTACTGTATATGATCAGCTTATGGAAGGGTACCCTAGCGATGAGGATCGTGAAGCCATCTTCCAAGCGTATATTAAGGCTTTGAATGAGGATCCAGAGCAATATAGAATTGATGCTAAAAAATTTGAAGAGTGGGCTCGATCTCAGACTGCAGCTTCATTGGTTGAGTTTGCATCAAGAGAAGGAGAAGTTGAGAGTATTTTGAAGGACATTGCAGAAAGAGCAGGGAGCAAGGGGAATTTCAGTTACAGCCGATTTTTTGCTATTGGACTATTTCGTCTCCTTGAATTGGCAAATGCTACTGAGCCCAGTATCTTGGAAAAGCTCTGTGCCGCTTTAAATATCGACAAAAAAGGTGTAGACCGAGACCTTGATGTATACCGTAACCTGCTTTCAAAGTTGGTTCAGGCGAAAGAGCTCCTAAAGGAATATGTCGACAGAGAGAAGAAGAAAAGAGATGAGAGGGCTGGATCACAGACAGCTAATGAGGCCATAACTAAATGCTTGGGAGAATACAGCATGCAGACTGGTTTATAAAAGGTGTGCTATTTCAATTGTGTAGACTTGTGAAGCTCAATACTAAAATTTATACTCTCCCGAAAAATTTTATGTTCTAATTCAGTTACCTAGTATACGTT

Coding sequence (CDS)

ATGGCGGCTGTTAATTCCATTTCATTCTCTACACTAAACCAATGTTCCGATAGGAGATTGCTGCTTCCCTCCTCTCGTTCGCACTCCTCCAATTTCCACGGCTTTCCTTTTCGTACTAGCGTTTTCACTCATTATTCCCGAGTACGAGCATCCACCTTCAGTTCTCGCATGGTCATTCATTGCATGTCCGCCGGAACAGATGTGACCACTGTGGCCGAGACAAAATTGAACTTCCTTAAGGCCTATAAACGGCCTATCCCTAGTATTTACAACACGGTTCTGCAAGAATTGATTGTTCAGCAGCATTTGATGAGGTATAAGAGGACATACCGTTATGATCCTGTTTTCGCTCTTGGATTTGTTACTGTATATGATCAGCTTATGGAAGGGTACCCTAGCGATGAGGATCGTGAAGCCATCTTCCAAGCGTATATTAAGGCTTTGAATGAGGATCCAGAGCAATATAGAATTGATGCTAAAAAATTTGAAGAGTGGGCTCGATCTCAGACTGCAGCTTCATTGGTTGAGTTTGCATCAAGAGAAGGAGAAGTTGAGAGTATTTTGAAGGACATTGCAGAAAGAGCAGGGAGCAAGGGGAATTTCAGTTACAGCCGATTTTTTGCTATTGGACTATTTCGTCTCCTTGAATTGGCAAATGCTACTGAGCCCAGTATCTTGGAAAAGCTCTGTGCCGCTTTAAATATCGACAAAAAAGGTGTAGACCGAGACCTTGATGTATACCGTAACCTGCTTTCAAAGTTGGTTCAGGCGAAAGAGCTCCTAAAGGAATATGTCGACAGAGAGAAGAAGAAAAGAGATGAGAGGGCTGGATCACAGACAGCTAATGAGGCCATAACTAAATGCTTGGGAGAATACAGCATGCAGACTGGTTTATAA

Protein sequence

MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIHCMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEYSMQTGL*
Homology
[Close]
BLAST of Cucsa.148030 vs. Swiss-Prot
Match: THF1_SOLTU (Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum tuberosum GN=THF1 PE=2 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.9e-109
Identity = 201/293 (68.60%), Postives = 243/293 (82.94%), Query Frame = 1 

Query: 1   MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIH 60
           MAAV S+SFS + Q ++R+  + SSRS  +    F FR++       VR+S  +SR V+H
Sbjct: 1   MAAVTSVSFSAITQSAERKSSVSSSRSIDT----FRFRSNFSFDSVNVRSSNSTSRFVVH 60

Query: 61  CMSAGT-DVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALG 120
           C S+   D+ TVA+TKL FL AYKRPIP++YNTVLQELIVQQHL RYK++Y+YDPVFALG
Sbjct: 61  CTSSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALG 120

Query: 121 FVTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFAS 180
           FVTVYDQLMEGYPS+EDR AIF+AYI+AL EDPEQYR DA+K EEWAR+Q A +LV+F+S
Sbjct: 121 FVTVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSS 180

Query: 181 REGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKG 240
           +EGE+E+I KDIA+RAG+K  F YSR FA+GLFRLLELAN T+P+ILEKLCAALN++KK 
Sbjct: 181 KEGEIENIFKDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILEKLCAALNVNKKS 240

Query: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEY 293
           VDRDLDVYRNLLSKLVQAKELLKEYV+REKKKR ER  +Q ANE +TKCLG+Y
Sbjct: 241 VDRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERE-TQKANETVTKCLGDY 288

[Close]
BLAST of Cucsa.148030 vs. Swiss-Prot
Match: THF1_ARATH (Protein THYLAKOID FORMATION 1, chloroplastic OS=Arabidopsis thaliana GN=THF1 PE=1 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 4.9e-109
Identity = 207/291 (71.13%), Postives = 247/291 (84.88%), Query Frame = 1 

Query: 3   AVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFS-SRMVIHC 62
           A++S+SF  L Q SD+     SSR  +S          + T +SR+  ++ S S+ +IHC
Sbjct: 5   AISSLSFPALGQ-SDKISNFASSRPLASAIR-------ICTKFSRLSLNSRSTSKSLIHC 64

Query: 63  MSAGT-DVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 122
           MS  T DV  V+ETK  FLKAYKRPIPSIYNTVLQELIVQQHLMRYK+TYRYDPVFALGF
Sbjct: 65  MSNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGF 124

Query: 123 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASR 182
           VTVYDQLMEGYPSD+DR+AIF+AYI+ALNEDP+QYRIDA+K EEWARSQT+ASLV+F+S+
Sbjct: 125 VTVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSK 184

Query: 183 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 242
           EG++E++LKDIA RAGSK  FSYSRFFA+GLFRLLELA+AT+P++L+KLCA+LNI+KK V
Sbjct: 185 EGDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSV 244

Query: 243 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGE 292
           DRDLDVYRNLLSKLVQAKELLKEYV+REKKK+ ERA SQ ANE I+KCLG+
Sbjct: 245 DRDLDVYRNLLSKLVQAKELLKEYVEREKKKQGERAQSQKANETISKCLGD 287

[Close]
BLAST of Cucsa.148030 vs. Swiss-Prot
Match: THF1_ORYSJ (Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.2e-101
Identity = 195/288 (67.71%), Postives = 236/288 (81.94%), Query Frame = 1 

Query: 1   MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIH 60
           MAA++S+ F+ L + +D R   PS+ + ++         SV     R R     SR V+ 
Sbjct: 1   MAAISSLPFAALRRAADCR---PSTAAAAAGAGAGAVVLSV-----RPRRG---SRSVVR 60

Query: 61  CMSAGTDVT-TVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALG 120
           C++   DV  TVAETK+NFLK+YKRPI SIY+TVLQEL+VQQHLMRYK TY+YD VFALG
Sbjct: 61  CVATAGDVPPTVAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALG 120

Query: 121 FVTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFAS 180
           FVTVYDQLMEGYPS+EDR+AIF+AYI ALNEDPEQYR DA+K EEWARSQ   SLVEF+S
Sbjct: 121 FVTVYDQLMEGYPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSS 180

Query: 181 REGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKG 240
           ++GE+E+ILKDI+ERA  KG+FSYSRFFA+GLFRLLELANATEP+IL+KLCAALNI+K+ 
Sbjct: 181 KDGEIEAILKDISERAQGKGSFSYSRFFAVGLFRLLELANATEPTILDKLCAALNINKRS 240

Query: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITK 288
           VDRDLDVYRN+LSKLVQAKELLKEYV+REKKKR+ER+ +  +NEA+TK
Sbjct: 241 VDRDLDVYRNILSKLVQAKELLKEYVEREKKKREERSETPKSNEAVTK 277

[Close]
BLAST of Cucsa.148030 vs. Swiss-Prot
Match: THF1_ACAM1 (Protein Thf1 OS=Acaryochloris marina (strain MBIC 11017) GN=thf1 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.2e-36
Identity = 81/219 (36.99%), Postives = 135/219 (61.64%), Query Frame = 1 

Query: 67  DVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQ 126
           ++ TV++TK  F   + RP+ S+Y  V++EL+V+ HL+R    +RYDP+FALG  T +D+
Sbjct: 3   NLRTVSDTKRAFYSIHTRPVNSVYRRVVEELMVEMHLLRVNEDFRYDPIFALGVTTSFDR 62

Query: 127 LMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEF---ASREG- 186
            M+GY  + D++AIF A  KA   DP Q + D ++  E A+S++A  ++++   A+  G 
Sbjct: 63  FMDGYQPENDKDAIFSAICKAQEADPVQMKKDGQRLTELAQSKSAQEMLDWITQAANSGG 122

Query: 187 -EVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELA--NATE-----PSILEKLCAALN 246
            E++  L++IA+       F YSR FAIGLF LLEL+  N T+        L  +C  LN
Sbjct: 123 DELQWQLRNIAQNP----KFKYSRLFAIGLFTLLELSEGNITQDEESLAEFLPNICTVLN 182

Query: 247 IDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRD 274
           I +  + +DL++YR  L K+ Q ++ + + ++ +KK+R+
Sbjct: 183 ISESKLQKDLEIYRGNLDKIAQVRQAMDDILEAQKKRRE 217

[Close]
BLAST of Cucsa.148030 vs. Swiss-Prot
Match: THF1_TRIEI (Protein Thf1 OS=Trichodesmium erythraeum (strain IMS101) GN=thf1 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-34
Identity = 77/216 (35.65%), Postives = 128/216 (59.26%), Query Frame = 1 

Query: 70  TVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQLME 129
           TV++TK  F   + RPI SIYN V++EL+V+ HL+     Y Y+P +ALG VT +D+ M+
Sbjct: 6   TVSDTKKTFYHFHTRPINSIYNRVIEELLVEMHLISVNVDYSYNPFYALGVVTAFDRFMQ 65

Query: 130 GYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASREGEVES--I 189
           GY   ED+ +IF A I+   EDP +YR DAK  E+ A   +A+ ++ +      +++   
Sbjct: 66  GYSPQEDKTSIFNALIQGQEEDPNKYRSDAKGLEDLAGKISASDILSWICLSKNIDNTQY 125

Query: 190 LKDIAERAGSKGNFSYSRFFAIGLFRLLELANA-------TEPSILEKLCAALNIDKKGV 249
           L+D          F YSR FAIGLF LLE+ +             L+K+C +LN+ ++ +
Sbjct: 126 LQDDLRAISENSKFRYSRLFAIGLFTLLEIVDTELIKEQEKRTEALKKICQSLNLVEEKL 185

Query: 250 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERA 277
            +D+D+Y + L ++ QA+  +++ +   +KKR++R+
Sbjct: 186 LKDIDLYLSNLERVAQARSAMEDTLAAMRKKREKRS 221

[Close]
BLAST of Cucsa.148030 vs. TrEMBL
Match: A0A0A0K3P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046130 PE=3 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 1.7e-164
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1 

Query: 1   MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIH 60
           MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIH
Sbjct: 1   MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIH 60

Query: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASR 180
           VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASR
Sbjct: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASR 180

Query: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240
           EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV
Sbjct: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240

Query: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEYSMQTGL 299
           DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEYSMQTGL
Sbjct: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEYSMQTGL 298

[Close]
BLAST of Cucsa.148030 vs. TrEMBL
Match: A0A061E4M4_THECC (Photosystem II reaction center PSB29 protein OS=Theobroma cacao GN=TCM_007929 PE=3 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.1e-123
Identity = 229/292 (78.42%), Postives = 258/292 (88.36%), Query Frame = 1 

Query: 1   MAAVNSISFSTLNQCS-DRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVI 60
           MAAV+S+S S + Q S DR++ +PS+R  +SNF G  FRTSV  H   VR S  +S  V+
Sbjct: 1   MAAVSSLSLSAIGQTSGDRKVNVPSARYLASNFEGLRFRTSVLYHSVGVRGSASASPSVV 60

Query: 61  HCMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALG 120
           HCM A TDV TV+ETKLNFLKAYKRPIPS+YNTVLQELIVQQHLMRYK TYRYD VFALG
Sbjct: 61  HCMCAATDVPTVSETKLNFLKAYKRPIPSVYNTVLQELIVQQHLMRYKWTYRYDAVFALG 120

Query: 121 FVTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFAS 180
           FVTVYDQLMEGYPSDEDR+AIFQAYIKAL EDP+QYRIDA+K EEWARSQT++SLVEF+S
Sbjct: 121 FVTVYDQLMEGYPSDEDRDAIFQAYIKALKEDPQQYRIDAQKLEEWARSQTSSSLVEFSS 180

Query: 181 REGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKG 240
           R+GEVE+ILKDIAERAG  G+FSYSRFFA+GLFRLLELANATEP++LEKLCAALNI+K+ 
Sbjct: 181 RDGEVEAILKDIAERAGRMGSFSYSRFFAVGLFRLLELANATEPTVLEKLCAALNINKRS 240

Query: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGE 292
           VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKR+ER+ SQ ANEA+ KCLGE
Sbjct: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERSESQKANEAVKKCLGE 292

[Close]
BLAST of Cucsa.148030 vs. TrEMBL
Match: V4U436_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016098mg PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 5.4e-123
Identity = 228/294 (77.55%), Postives = 256/294 (87.07%), Query Frame = 1 

Query: 1   MAAVNSISFSTLNQCS-DRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVI 60
           MA++ S++F+++ Q S  R++ + S+RS  SNF GF FRTS+F H  R RAS+ SSRM+I
Sbjct: 1   MASLTSVAFTSIGQTSCQRKVNVSSTRSLVSNFEGFRFRTSLFCHCVRFRASSSSSRMII 60

Query: 61  HCMSAGTDVT-TVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFAL 120
            CMS  TDV  TVAETK+NFLK YKRPIPSIYNTVLQELIVQQHLMRYKRTY+YDPVFAL
Sbjct: 61  QCMSTATDVPPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFAL 120

Query: 121 GFVTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFA 180
           GFVTVYD+LMEGYPSDEDREAIFQAYI AL EDPEQYRIDA+K EEWAR QTA+SLVEF 
Sbjct: 121 GFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFP 180

Query: 181 SREGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKK 240
           S+EGEVE IL DIAERA  KGNFSYSRFFA+GLFRLLELANATEP++LEKLCA LN++K+
Sbjct: 181 SKEGEVEGILNDIAERASGKGNFSYSRFFAVGLFRLLELANATEPTVLEKLCAVLNVNKR 240

Query: 241 GVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEY 293
            VDRDLDVYRNLLSKL+QAKELLKEYVDREKKKR+ER   Q ANEAI KCLGEY
Sbjct: 241 SVDRDLDVYRNLLSKLLQAKELLKEYVDREKKKREERTEPQKANEAIKKCLGEY 294

[Close]
BLAST of Cucsa.148030 vs. TrEMBL
Match: A0A067EX58_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022333mg PE=3 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 7.0e-123
Identity = 227/294 (77.21%), Postives = 257/294 (87.41%), Query Frame = 1 

Query: 1   MAAVNSISFSTLNQCS-DRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVI 60
           MA++ S++F+++ Q S  R++ + S+RS  SNF GF FRTS+F H  R RAS+ SSRM+I
Sbjct: 1   MASLTSVAFTSIGQTSCQRKVNVSSTRSLVSNFEGFRFRTSLFCHCVRFRASSSSSRMII 60

Query: 61  HCMSAGTDVT-TVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFAL 120
            CMS  TDV  TVAETK+NFLK YKRPIPSIYNTVLQELIVQQHLMRYKRTY+YDPVFAL
Sbjct: 61  QCMSTATDVPPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFAL 120

Query: 121 GFVTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFA 180
           GFVTVYD+LMEGYPS+EDREAIFQAYI AL EDPEQYRIDA+K EEWAR QTA+SLVEF 
Sbjct: 121 GFVTVYDRLMEGYPSEEDREAIFQAYITALKEDPEQYRIDAQKLEEWARGQTASSLVEFP 180

Query: 181 SREGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKK 240
           S+EGEVE +LKDIAERA  KGNFSYSRFFA+GLFRLLELANATEP++LEKLCA LN++K+
Sbjct: 181 SKEGEVEGLLKDIAERASGKGNFSYSRFFAVGLFRLLELANATEPTVLEKLCAVLNVNKR 240

Query: 241 GVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEY 293
            VDRDLDVYRNLLSKL+QAKELLKEYVDREKKKR+ER   Q ANEAI KCLGEY
Sbjct: 241 SVDRDLDVYRNLLSKLLQAKELLKEYVDREKKKREERTEPQKANEAIKKCLGEY 294

[Close]
BLAST of Cucsa.148030 vs. TrEMBL
Match: A0A0D2V4U5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G132100 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 9.2e-123
Identity = 227/293 (77.47%), Postives = 258/293 (88.05%), Query Frame = 1 

Query: 1   MAAVNSISFSTLNQCS-DRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVI 60
           MAAV+S+SF  + Q S DR+L +PS+R  +SNF GF FRTS+      +RAST +S  V 
Sbjct: 1   MAAVSSLSFPAIGQTSGDRKLNVPSARYLASNFEGFRFRTSLLYQSVGLRASTTASPSVF 60

Query: 61  HCMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALG 120
           +CMS  TD  TV+ETK +FLKAYKRPIPS+YNTVLQELIVQQHLMRYK+TYRYD VFALG
Sbjct: 61  YCMSTATDTPTVSETKSSFLKAYKRPIPSVYNTVLQELIVQQHLMRYKKTYRYDAVFALG 120

Query: 121 FVTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFAS 180
           FVTVYDQLMEGYPSDEDR+AIFQAYI AL EDP+QYR DA+K EEWAR+QT++SLVEF+S
Sbjct: 121 FVTVYDQLMEGYPSDEDRDAIFQAYINALKEDPQQYRADAQKLEEWARAQTSSSLVEFSS 180

Query: 181 REGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKG 240
           R+GEVE+ILKDIAERAGSKG+FSYSRFFAIGLFRLLELANATEP++LEKLCAALNIDK+ 
Sbjct: 181 RDGEVEAILKDIAERAGSKGSFSYSRFFAIGLFRLLELANATEPTVLEKLCAALNIDKRS 240

Query: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEY 293
           VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKR+ER+ S  ANEA+ KCLGEY
Sbjct: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERSESPKANEAVKKCLGEY 293

[Close]
BLAST of Cucsa.148030 vs. TAIR10
Match: AT2G20890.1 (AT2G20890.1 photosystem II reaction center PSB29 protein)

HSP 1 Score: 395.6 bits (1015), Expect = 2.7e-110
Identity = 207/291 (71.13%), Postives = 247/291 (84.88%), Query Frame = 1 

Query: 3   AVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFS-SRMVIHC 62
           A++S+SF  L Q SD+     SSR  +S          + T +SR+  ++ S S+ +IHC
Sbjct: 5   AISSLSFPALGQ-SDKISNFASSRPLASAIR-------ICTKFSRLSLNSRSTSKSLIHC 64

Query: 63  MSAGT-DVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 122
           MS  T DV  V+ETK  FLKAYKRPIPSIYNTVLQELIVQQHLMRYK+TYRYDPVFALGF
Sbjct: 65  MSNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGF 124

Query: 123 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASR 182
           VTVYDQLMEGYPSD+DR+AIF+AYI+ALNEDP+QYRIDA+K EEWARSQT+ASLV+F+S+
Sbjct: 125 VTVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSK 184

Query: 183 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 242
           EG++E++LKDIA RAGSK  FSYSRFFA+GLFRLLELA+AT+P++L+KLCA+LNI+KK V
Sbjct: 185 EGDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSV 244

Query: 243 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGE 292
           DRDLDVYRNLLSKLVQAKELLKEYV+REKKK+ ERA SQ ANE I+KCLG+
Sbjct: 245 DRDLDVYRNLLSKLVQAKELLKEYVEREKKKQGERAQSQKANETISKCLGD 287

[Close]
BLAST of Cucsa.148030 vs. NCBI nr
Match: gi|449438054|ref|XP_004136805.1| (PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Cucumis sativus])

HSP 1 Score: 586.6 bits (1511), Expect = 2.4e-164
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1 

Query: 1   MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIH 60
           MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIH
Sbjct: 1   MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIH 60

Query: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASR 180
           VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASR
Sbjct: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASR 180

Query: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240
           EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV
Sbjct: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240

Query: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEYSMQTGL 299
           DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEYSMQTGL
Sbjct: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEYSMQTGL 298

[Close]
BLAST of Cucsa.148030 vs. NCBI nr
Match: gi|659110691|ref|XP_008455361.1| (PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Cucumis melo])

HSP 1 Score: 562.8 bits (1449), Expect = 3.7e-157
Identity = 287/298 (96.31%), Postives = 291/298 (97.65%), Query Frame = 1 

Query: 1   MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIH 60
           MAAVNSISFSTLNQCSDRR  +PSSRS SSNF GF FRTS+FTHYSRVR STFSSRMVIH
Sbjct: 1   MAAVNSISFSTLNQCSDRRFPVPSSRSLSSNFDGFRFRTSLFTHYSRVRPSTFSSRMVIH 60

Query: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASR 180
           VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDA+K EEWARSQTAASLVEFASR
Sbjct: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQTAASLVEFASR 180

Query: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240
           EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV
Sbjct: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240

Query: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEYSMQTGL 299
           DRDLDVYRNLLSKLVQAKELLKEY+DREKKKRDERAGSQTANEAITKCLGEYSMQTGL
Sbjct: 241 DRDLDVYRNLLSKLVQAKELLKEYIDREKKKRDERAGSQTANEAITKCLGEYSMQTGL 298

[Close]
BLAST of Cucsa.148030 vs. NCBI nr
Match: gi|1009128024|ref|XP_015881005.1| (PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 459.5 bits (1181), Expect = 4.4e-126
Identity = 233/293 (79.52%), Postives = 261/293 (89.08%), Query Frame = 1 

Query: 1   MAAVNSISFSTLNQCSDRRLLLPSS-RSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVI 60
           MAA+ S+SFS L+  SDR+ L+ SS R+ +SN  GF  RTS   HY   R ST SSRMVI
Sbjct: 1   MAALTSLSFSALSHFSDRKALIASSTRNSASNSDGFRLRTSFSCHYVGFRTSTSSSRMVI 60

Query: 61  HCMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALG 120
           HCMS+ T + TV+ETKLNFLKAYKRPIPSIYN+VL ELIVQQHL+RYKRTY YDPVFALG
Sbjct: 61  HCMSSTTALPTVSETKLNFLKAYKRPIPSIYNSVLLELIVQQHLIRYKRTYSYDPVFALG 120

Query: 121 FVTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFAS 180
           FVTVYDQLM+GYPSDEDREAIFQAYIKALNEDPEQYRIDAKK EEWARSQTA+SLV+F+S
Sbjct: 121 FVTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKMEEWARSQTASSLVDFSS 180

Query: 181 REGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKG 240
           REGEVE  LKDIAERAG KG+FSYSRFFA+GLFRLLELANA+EP++LEKLCAALNI+KK 
Sbjct: 181 REGEVEGTLKDIAERAGGKGSFSYSRFFAVGLFRLLELANASEPTVLEKLCAALNINKKS 240

Query: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEY 293
           VDRDLD+YRNLLSKLVQAK+LLKEYVDREKKKR+ERA SQ ANEA+T+CLG+Y
Sbjct: 241 VDRDLDIYRNLLSKLVQAKDLLKEYVDREKKKREERAESQKANEAVTQCLGDY 293

[Close]
BLAST of Cucsa.148030 vs. NCBI nr
Match: gi|694324363|ref|XP_009353207.1| (PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Pyrus x bretschneideri])

HSP 1 Score: 458.8 bits (1179), Expect = 7.5e-126
Identity = 226/295 (76.61%), Postives = 262/295 (88.81%), Query Frame = 1 

Query: 1   MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIH 60
           MAAV S+SFS L+QCSDR+ ++  +R+  SN  G  FRTS+ +HY  +RAS++SSRMV+H
Sbjct: 1   MAAVASLSFSALSQCSDRKSVVSPARNLGSNAEGIRFRTSISSHYGGIRASSWSSRMVVH 60

Query: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CM+  +D  TVA+TKLNFLKAYKRPIPS+YN+VLQELIVQQHLM+YKRTYRYDPVFALGF
Sbjct: 61  CMAGSSDSPTVADTKLNFLKAYKRPIPSVYNSVLQELIVQQHLMKYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASR 180
           VTVYDQLM+GYPSDEDREAIFQAYIKALNEDPEQYR DA+K EEWAR+QT++SLVEF SR
Sbjct: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRTDAQKLEEWARAQTSSSLVEFPSR 180

Query: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240
           EGEVE+ LKDIAERA  K +FSYSRFFAIGLFRLLE+A ATEP++LEKLCAALNIDK+ V
Sbjct: 181 EGEVEAALKDIAERAAGKESFSYSRFFAIGLFRLLEVAKATEPTVLEKLCAALNIDKRSV 240

Query: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEYSMQ 296
           DRDLDVYRNLLSKLVQAKELL+EYV REKKKR+ERA +Q A+E +TKCLG+Y  Q
Sbjct: 241 DRDLDVYRNLLSKLVQAKELLREYVAREKKKREERAETQKASETVTKCLGDYVCQ 295

[Close]
BLAST of Cucsa.148030 vs. NCBI nr
Match: gi|658025445|ref|XP_008348123.1| (PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Malus domestica])

HSP 1 Score: 457.6 bits (1176), Expect = 1.7e-125
Identity = 226/295 (76.61%), Postives = 260/295 (88.14%), Query Frame = 1 

Query: 1   MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIH 60
           MAAV S+SFS L+QCSDR+ ++ S+R+  SN  G  FRTS+ +HY  +RAS+ SSRMV+H
Sbjct: 1   MAAVASLSFSALSQCSDRKSVVSSARNLGSNAEGIRFRTSISSHYGGIRASSSSSRMVVH 60

Query: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CM+  +D  TVA+TKLNFLKAYKRPIPS+YN+VLQELIVQQHLM+YKRTYRYDPVFALGF
Sbjct: 61  CMAGSSDAPTVADTKLNFLKAYKRPIPSVYNSVLQELIVQQHLMKYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASR 180
           VTVYDQLM+GYPSDEDREAIFQAYIKALNEDPEQYR DA+K EEWAR+QT++SLVEF SR
Sbjct: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRTDAQKLEEWARAQTSSSLVEFPSR 180

Query: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240
           EGEVE  LKDIAERA  K +FSYSRFFAIGLFRLLE+A ATEP++LEKLCAALNIDK+ V
Sbjct: 181 EGEVEVALKDIAERAAGKESFSYSRFFAIGLFRLLEVAKATEPTVLEKLCAALNIDKRSV 240

Query: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEYSMQ 296
           DRDLDVYRNLLSKLVQAKELL+EYV REKKKR+ER  +Q A+E +TKCLG+Y  Q
Sbjct: 241 DRDLDVYRNLLSKLVQAKELLREYVAREKKKREERVETQKASETVTKCLGDYVCQ 295

The following BLAST results are available for this feature:
BLAST of Cucsa.148030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
THF1_SOLTU2.9e-10968.60Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum tuberosum GN=THF1 PE=2 SV... [more]
THF1_ARATH4.9e-10971.13Protein THYLAKOID FORMATION 1, chloroplastic OS=Arabidopsis thaliana GN=THF1 PE=... [more]
THF1_ORYSJ2.2e-10167.71Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=T... [more]
THF1_ACAM14.2e-3636.99Protein Thf1 OS=Acaryochloris marina (strain MBIC 11017) GN=thf1 PE=3 SV=1[more]
THF1_TRIEI1.8e-3435.65Protein Thf1 OS=Trichodesmium erythraeum (strain IMS101) GN=thf1 PE=3 SV=1[more]
BLAST of Cucsa.148030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3P0_CUCSA1.7e-164100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046130 PE=3 SV=1[more]
A0A061E4M4_THECC1.1e-12378.42Photosystem II reaction center PSB29 protein OS=Theobroma cacao GN=TCM_007929 PE... [more]
V4U436_9ROSI5.4e-12377.55Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016098mg PE=3 SV=1[more]
A0A067EX58_CITSI7.0e-12377.21Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022333mg PE=3 SV=1[more]
A0A0D2V4U5_GOSRA9.2e-12377.47Uncharacterized protein OS=Gossypium raimondii GN=B456_012G132100 PE=3 SV=1[more]
BLAST of Cucsa.148030 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G20890.12.7e-11071.13 photosystem II reaction center PSB29 protein[more]
BLAST of Cucsa.148030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438054|ref|XP_004136805.1|2.4e-164100.00PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Cucumis sativus][more]
gi|659110691|ref|XP_008455361.1|3.7e-15796.31PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Cucumis melo][more]
gi|1009128024|ref|XP_015881005.1|4.4e-12679.52PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Ziziphus jujuba][more]
gi|694324363|ref|XP_009353207.1|7.5e-12676.61PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Pyrus x bretschneid... [more]
gi|658025445|ref|XP_008348123.1|1.7e-12576.61PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017499Thf1
IPR017499Thf1
IPR017499Thf1
Vocabulary: Biological Process
TermDefinition
GO:0010207photosystem II assembly
GO:0015979photosynthesis
GO:0010207photosystem II assembly
GO:0015979photosynthesis
GO:0010207photosystem II assembly
GO:0015979photosynthesis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0045038 protein import into chloroplast thylakoid membrane
biological_process GO:0015979 photosynthesis
biological_process GO:0042793 transcription from plastid promoter
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0009902 chloroplast relocation
biological_process GO:0006417 regulation of translation
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006364 rRNA processing
biological_process GO:0045037 protein import into chloroplast stroma
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
biological_process GO:0042742 defense response to bacterium
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009528 plastid inner membrane
cellular_component GO:0009527 plastid outer membrane
cellular_component GO:0010319 stromule
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.148030.1Cucsa.148030.1mRNA
Cucsa.148030.2Cucsa.148030.2mRNA
Cucsa.148030.4Cucsa.148030.4mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017499Protein Thf1HAMAPMF_01843Thf1coord: 6..214
score: 22
IPR017499Protein Thf1PFAMPF11264ThylakoidFormatcoord: 11..216
score: 5.6
IPR017499Protein Thf1TIGRFAMsTIGR03060TIGR03060coord: 9..213
score: 7.0
NoneNo IPR availableunknownCoilCoilcoord: 188..215
scor
NoneNo IPR availablePANTHERPTHR34793FAMILY NOT NAMEDcoord: 8..238
score: 2.2E
NoneNo IPR availablePANTHERPTHR34793:SF1PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTICcoord: 8..238
score: 2.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.148030Cla007720Watermelon (97103) v1cgywmB262
Cucsa.148030Csa7G046130Cucumber (Chinese Long) v2cgycuB215
Cucsa.148030MELO3C018772Melon (DHL92) v3.5.1cgymeB248
Cucsa.148030ClCG02G001360Watermelon (Charleston Gray)cgywcgB248
Cucsa.148030CSPI07G04230Wild cucumber (PI 183967)cgycpiB220
Cucsa.148030CmaCh11G018540Cucurbita maxima (Rimu)cgycmaB0405
Cucsa.148030CmaCh19G009590Cucurbita maxima (Rimu)cgycmaB0407
Cucsa.148030CmoCh19G009890Cucurbita moschata (Rifu)cgycmoB0407
Cucsa.148030CmoCh11G019300Cucurbita moschata (Rifu)cgycmoB0404
Cucsa.148030Lsi11G015090Bottle gourd (USVL1VR-Ls)cgylsiB237
Cucsa.148030Cp4.1LG04g03250Cucurbita pepo (Zucchini)cgycpeB0395
Cucsa.148030Cp4.1LG15g07800Cucurbita pepo (Zucchini)cgycpeB0392
Cucsa.148030MELO3C018772.2Melon (DHL92) v3.6.1cgymedB246
Cucsa.148030CsaV3_7G004070Cucumber (Chinese Long) v3cgycucB226
Cucsa.148030Cla97C02G027820Watermelon (97103) v2cgywmbB248
Cucsa.148030Bhi05G001568Wax gourdcgywgoB288
Cucsa.148030Carg19098Silver-seed gourdcarcgyB0810
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.148030Cucurbita maxima (Rimu)cgycmaB0406
Cucsa.148030Cucurbita maxima (Rimu)cgycmaB0409
Cucsa.148030Cucurbita moschata (Rifu)cgycmoB0405
Cucsa.148030Cucurbita moschata (Rifu)cgycmoB0406
Cucsa.148030Cucurbita moschata (Rifu)cgycmoB0408
Cucsa.148030Cucurbita moschata (Rifu)cgycmoB0409
Cucsa.148030Wild cucumber (PI 183967)cgycpiB219
Cucsa.148030Melon (DHL92) v3.5.1cgymeB249
Cucsa.148030Watermelon (Charleston Gray)cgywcgB247
Cucsa.148030Watermelon (97103) v1cgywmB259
Cucsa.148030Watermelon (97103) v1cgywmB257
Cucsa.148030Cucurbita pepo (Zucchini)cgycpeB0393
Cucsa.148030Cucurbita pepo (Zucchini)cgycpeB0394
Cucsa.148030Cucurbita pepo (Zucchini)cgycpeB0396
Cucsa.148030Bottle gourd (USVL1VR-Ls)cgylsiB235
Cucsa.148030Bottle gourd (USVL1VR-Ls)cgylsiB238
Cucsa.148030Melon (DHL92) v3.6.1cgymedB245
Cucsa.148030Melon (DHL92) v3.6.1cgymedB247
Cucsa.148030Silver-seed gourdcarcgyB0035
Cucsa.148030Silver-seed gourdcarcgyB0183
Cucsa.148030Silver-seed gourdcarcgyB0717
Cucsa.148030Silver-seed gourdcarcgyB0997
Cucsa.148030Silver-seed gourdcarcgyB1069
Cucsa.148030Cucumber (Chinese Long) v3cgycucB222
Cucsa.148030Cucumber (Chinese Long) v3cgycucB225
Cucsa.148030Watermelon (97103) v2cgywmbB247
Cucsa.148030Watermelon (97103) v2cgywmbB251
Cucsa.148030Wax gourdcgywgoB291
Cucsa.148030Wax gourdcgywgoB289
Cucsa.148030Cucumber (Gy14) v1cgycgyB005
Cucsa.148030Cucumber (Gy14) v1cgycgyB076