ClCG02G001360 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G001360
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionThf1-like protein
LocationCG_Chr02 : 1512998 .. 1515847 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCACCCTCTCTTCTTTCCATTTTTCCCAGAAAATTTCTTCCAATTTCATTCTCTATACCTCTTTTCTCCCTCTCTTCTTCGATATGAAACCCATTTTCTCCAAAAATTCATAAGCTTCCTACATTTTCCCTCATTCTTCTTTAATGGCGGCTGTTAATTCCATTTCAATCTCAACATTAAACCAATGTTCTGATAGAAGATTGCCGGTTCCGTCCCCTCGTTCACTCGCCTCCAATTTCGACGCCTTTCGTTTTCGTACGAGCGTTTTCAGTCATTATTCCCGAGTAAGAGCATCCACCTTCAGTTCTCGCATGGTCATTCATTGCATGTCTGCCGGAACAGGTAGCTTCTCATGATTTGTTTTCCTTACTCACTTATCAGACTATTCCCTTGCCAGAAGAAAACAGCCTCGCTTCTCTGATTTCGATTGAGTTTTCGAATCTCTTTTTGTTTTGATTTTCCTCATTTGTAGAGATGGAATGTTATGGAGGGAATTAGAAGATTTAAGTAACAAATAAGCTTTCAATAGTTCAGTTGAATCAGTTCTATGCTTGTGTAGTGTGTTGAGATTTCTCTAGTTTCGTTTTCTTGCTACTTAGGTCTAGAAACTGATGCGTTATTTTGACGGCTCAGATGTGACCACTGTAGCCGAGACAAAATTGAACTTCCTCAAGGCGTATAAACGGCCTATCCCTAGCATTTACAACACTGTTCTGCAAGAATTGATTGTTCAACAGCATTTGATGAGGTATAAGAGGACATACCGTTATGACCCTGTTTTCGCCCTTGGTTTTGTTACTGTATATGATCAGCTTATGGAAGGGTACCCTAGCGATGAGGATCGTGATGCCATCTTCCAAGCATACATTAAGGCATTGAATGAGGATCCAGAGCAATATAGGTTTGGCCATGTATTCCCCTTTGCTTTTACCATCCCTGATCTCTATCTATTCTTGTCACTTTTCAGCTAAAAACTTCAGTAGGCTTATTTATCGGTAGACACTGTTAAGTTGAAAAATCATAAGCATAATTCACTTTATAGCTGTCTAAACGAATGACCTGGATTGGTATCGAATGTTGGTGCATGTTCAAAAAGTAGTATCGATGGCTTTTATTTGTACCTGGTAATCAAATTTATGAATGTTAATTCTTTGTCCAATAACTCCAAGAATGTAATGTTCTTCACTGGAAATTATTTCCAACCGTCGACAATTTTTCTAATAATTTCGAGAAGGGTTTTTCTTTATTTTAAGTAATATTTTCTGTTATGCCGTCCAGAATTGATGCTAAAAAATTGGAAGAGTGGGCTCGGTCTCAGACTGCCACTTCATTGGTTGAGTTTGCATCAAGAGAAGGAGAAGTTGAGAGTACGTTGAAGGACATTGCAGAACGGGCAGGGAATAAGGGGAATTTCAGTTACAGCCGATTTTTTGCTATTGGACTTTTCCGACTCCTTGAATTGGCAAATGCTACTGAACCCAGTATCTTGGAAAAGGTTTATTTCATATTTCTTTCTGTGATATAGCTTGAAAGTAGATGAAGATTATGGTATGACAATTTTTATCAAGCTATTTATTGCTAAATTAAATGACAACCAGCCCCTCTCATAGGACTTTTATTGATAGATTATATTATTTCTCTGAGTGCTGCCATTTATAAAGTATAATACCGTTTCTGGTTCATTAGTTATCTTTTTACCCGTTAGAGAAATTGAATCTTCATGATATATTGCCTAACCTTATTCTGTTCGAGACTTGAGAGAATTAGGTTCAAAGGCTTCTTTCCTGCATAAGGCTGCATCTTATTTTCTAGCTAACTATTTTTTTTTGGAACATTTGCCCCTCCCCTTCCACCCTTGCCCCTGACCCAACACACACACACAGACTTACAGAGCTTTTGTGCGATTTCCCTTCGCCCTTGTGAAGACTGACTCTATTTACTGTGTCTATCACTGAAGATATAATACTTTTGATCTTTTAAAACAGCTAAAGCTATATAGTCGAACAGTTTCTAAATCAGCTGAAGTCATGGATGGAGATTTGACCCCTCAGTATTGGCATCTAACTTATTGCTACTTCTGAACAGCTCTGTGCTGCTTTAAACATTGACAAAAAAGGTGTAGACCGAGACCTTGATGTATACCGCAACCTGCTTTCAAAGTTGGTTCAAGCGAAGGAGCTCCTAAAGGAATACGTCGATAGGTAAGAGACTGTTAAGTTCATGGTTCTAGGCATGATAAAGTAGGTCTAACTACTCTTCCAAACCATCATTTTTTCACAGATGTTATGCATCTATTTGAAAACTGTCAATCTTGCATGTGTCAAATTGTCTGCAAGTCACTGTCATAGCATTTATATTCATTGGATATCCACCACATGTTCCTCATCCTTGATTGTGATTCTACATTTTAAGGACAAAAGTTTGTATGATTAACCAGTGGTTTTCAATTGTATAGAGAGAAGAAGAAAAGAGATGAGAGGAGTGGATCACAGACAGCTAATGAGGCCATAACTAAATGCTTGGGAGAATACAGCATGCAGACTGGTTTGTAAAGAAAAGATGATTGGAGCACTTCCTAATTTGAGATAGACTTGAGAGTTTATAGCAATATTCTAAATTACCCTATAGATATGCATCTGTAATGAATTGTTGGGTCTCATGCATTTGGTAAATTTTGTATTCAGCCAGGCACTACCTTTATTTCTCATTTGATATAACCACCACTCAAGCTATTTTTTAATCATTTGTATTACATATTTTAGAGCGCAATTGTTAATACAAATGCTATCGCACTCTGTGCAGTAATCACTCTCCAAGTGATATTTGACCATCTGGCTTTTGTATTGTGC

mRNA sequence

CTCACCCTCTCTTCTTTCCATTTTTCCCAGAAAATTTCTTCCAATTTCATTCTCTATACCTCTTTTCTCCCTCTCTTCTTCGATATGAAACCCATTTTCTCCAAAAATTCATAAGCTTCCTACATTTTCCCTCATTCTTCTTTAATGGCGGCTGTTAATTCCATTTCAATCTCAACATTAAACCAATGTTCTGATAGAAGATTGCCGGTTCCGTCCCCTCGTTCACTCGCCTCCAATTTCGACGCCTTTCGTTTTCGTACGAGCGTTTTCAGTCATTATTCCCGAGTAAGAGCATCCACCTTCAGTTCTCGCATGGTCATTCATTGCATGTCTGCCGGAACAGATGTGACCACTGTAGCCGAGACAAAATTGAACTTCCTCAAGGCGTATAAACGGCCTATCCCTAGCATTTACAACACTGTTCTGCAAGAATTGATTGTTCAACAGCATTTGATGAGGTATAAGAGGACATACCGTTATGACCCTGTTTTCGCCCTTGGTTTTGTTACTGTATATGATCAGCTTATGGAAGGGTACCCTAGCGATGAGGATCGTGATGCCATCTTCCAAGCATACATTAAGGCATTGAATGAGGATCCAGAGCAATATAGAATTGATGCTAAAAAATTGGAAGAGTGGGCTCGGTCTCAGACTGCCACTTCATTGGTTGAGTTTGCATCAAGAGAAGGAGAAGTTGAGAGTACGTTGAAGGACATTGCAGAACGGGCAGGGAATAAGGGGAATTTCAGTTACAGCCGATTTTTTGCTATTGGACTTTTCCGACTCCTTGAATTGGCAAATGCTACTGAACCCAGTATCTTGGAAAAGCTCTGTGCTGCTTTAAACATTGACAAAAAAGGTGTAGACCGAGACCTTGATGTATACCGCAACCTGCTTTCAAAGTTGGTTCAAGCGAAGGAGCTCCTAAAGGAATACGTCGATAGAGAGAAGAAGAAAAGAGATGAGAGGAGTGGATCACAGACAGCTAATGAGGCCATAACTAAATGCTTGGGAGAATACAGCATGCAGACTGGTTTGTAAAGAAAAGATGATTGGAGCACTTCCTAATTTGAGATAGACTTGAGAGTTTATAGCAATATTCTAAATTACCCTATAGATATGCATCTGTAATGAATTGTTGGGTCTCATGCATTTGGTAAATTTTGTATTCAGCCAGGCACTACCTTTATTTCTCATTTGATATAACCACCACTCAAGCTATTTTTTAATCATTTGTATTACATATTTTAGAGCGCAATTGTTAATACAAATGCTATCGCACTCTGTGCAGTAATCACTCTCCAAGTGATATTTGACCATCTGGCTTTTGTATTGTGC

Coding sequence (CDS)

ATGGCGGCTGTTAATTCCATTTCAATCTCAACATTAAACCAATGTTCTGATAGAAGATTGCCGGTTCCGTCCCCTCGTTCACTCGCCTCCAATTTCGACGCCTTTCGTTTTCGTACGAGCGTTTTCAGTCATTATTCCCGAGTAAGAGCATCCACCTTCAGTTCTCGCATGGTCATTCATTGCATGTCTGCCGGAACAGATGTGACCACTGTAGCCGAGACAAAATTGAACTTCCTCAAGGCGTATAAACGGCCTATCCCTAGCATTTACAACACTGTTCTGCAAGAATTGATTGTTCAACAGCATTTGATGAGGTATAAGAGGACATACCGTTATGACCCTGTTTTCGCCCTTGGTTTTGTTACTGTATATGATCAGCTTATGGAAGGGTACCCTAGCGATGAGGATCGTGATGCCATCTTCCAAGCATACATTAAGGCATTGAATGAGGATCCAGAGCAATATAGAATTGATGCTAAAAAATTGGAAGAGTGGGCTCGGTCTCAGACTGCCACTTCATTGGTTGAGTTTGCATCAAGAGAAGGAGAAGTTGAGAGTACGTTGAAGGACATTGCAGAACGGGCAGGGAATAAGGGGAATTTCAGTTACAGCCGATTTTTTGCTATTGGACTTTTCCGACTCCTTGAATTGGCAAATGCTACTGAACCCAGTATCTTGGAAAAGCTCTGTGCTGCTTTAAACATTGACAAAAAAGGTGTAGACCGAGACCTTGATGTATACCGCAACCTGCTTTCAAAGTTGGTTCAAGCGAAGGAGCTCCTAAAGGAATACGTCGATAGAGAGAAGAAGAAAAGAGATGAGAGGAGTGGATCACAGACAGCTAATGAGGCCATAACTAAATGCTTGGGAGAATACAGCATGCAGACTGGTTTGTAA

Protein sequence

MAAVNSISISTLNQCSDRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVIHCMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFASREGEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGEYSMQTGL
Homology
[Close]
BLAST of ClCG02G001360 vs. Swiss-Prot
Match: THF1_SOLTU (Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum tuberosum GN=THF1 PE=2 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.2e-110
Identity = 202/293 (68.94%), Postives = 241/293 (82.25%), Query Frame = 1 

Query: 1   MAAVNSISISTLNQCSDRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVIH 60
           MAAV S+S S + Q ++R+  V S RS+    D FRFR++       VR+S  +SR V+H
Sbjct: 1   MAAVTSVSFSAITQSAERKSSVSSSRSI----DTFRFRSNFSFDSVNVRSSNSTSRFVVH 60

Query: 61  CMSAGT-DVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALG 120
           C S+   D+ TVA+TKL FL AYKRPIP++YNTVLQELIVQQHL RYK++Y+YDPVFALG
Sbjct: 61  CTSSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALG 120

Query: 121 FVTVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFAS 180
           FVTVYDQLMEGYPS+EDR+AIF+AYI+AL EDPEQYR DA+KLEEWAR+Q A +LV+F+S
Sbjct: 121 FVTVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSS 180

Query: 181 REGEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKG 240
           +EGE+E+  KDIA+RAG K  F YSR FA+GLFRLLELAN T+P+ILEKLCAALN++KK 
Sbjct: 181 KEGEIENIFKDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILEKLCAALNVNKKS 240

Query: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGEY 293
           VDRDLDVYRNLLSKLVQAKELLKEYV+REKKKR ER  +Q ANE +TKCLG+Y
Sbjct: 241 VDRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERE-TQKANETVTKCLGDY 288

[Close]
BLAST of ClCG02G001360 vs. Swiss-Prot
Match: THF1_ARATH (Protein THYLAKOID FORMATION 1, chloroplastic OS=Arabidopsis thaliana GN=THF1 PE=1 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 4.1e-108
Identity = 209/290 (72.07%), Postives = 242/290 (83.45%), Query Frame = 1 

Query: 3   AVNSISISTLNQCSDRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVIHCM 62
           A++S+S   L Q SD+     S R LAS   A R  T  FS  S    ST  S+ +IHCM
Sbjct: 5   AISSLSFPALGQ-SDKISNFASSRPLAS---AIRICTK-FSRLSLNSRST--SKSLIHCM 64

Query: 63  SAGT-DVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGFV 122
           S  T DV  V+ETK  FLKAYKRPIPSIYNTVLQELIVQQHLMRYK+TYRYDPVFALGFV
Sbjct: 65  SNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFV 124

Query: 123 TVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFASRE 182
           TVYDQLMEGYPSD+DRDAIF+AYI+ALNEDP+QYRIDA+K+EEWARSQT+ SLV+F+S+E
Sbjct: 125 TVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKE 184

Query: 183 GEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGVD 242
           G++E+ LKDIA RAG+K  FSYSRFFA+GLFRLLELA+AT+P++L+KLCA+LNI+KK VD
Sbjct: 185 GDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVD 244

Query: 243 RDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGE 292
           RDLDVYRNLLSKLVQAKELLKEYV+REKKK+ ER+ SQ ANE I+KCLG+
Sbjct: 245 RDLDVYRNLLSKLVQAKELLKEYVEREKKKQGERAQSQKANETISKCLGD 287

[Close]
BLAST of ClCG02G001360 vs. Swiss-Prot
Match: THF1_ORYSJ (Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 3.4e-102
Identity = 197/288 (68.40%), Postives = 233/288 (80.90%), Query Frame = 1 

Query: 1   MAAVNSISISTLNQCSDRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVIH 60
           MAA++S+  + L + +D R   PS  + A+   A     SV     R R     SR V+ 
Sbjct: 1   MAAISSLPFAALRRAADCR---PSTAAAAAGAGAGAVVLSV-----RPRRG---SRSVVR 60

Query: 61  CMSAGTDVT-TVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALG 120
           C++   DV  TVAETK+NFLK+YKRPI SIY+TVLQEL+VQQHLMRYK TY+YD VFALG
Sbjct: 61  CVATAGDVPPTVAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALG 120

Query: 121 FVTVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFAS 180
           FVTVYDQLMEGYPS+EDRDAIF+AYI ALNEDPEQYR DA+K+EEWARSQ   SLVEF+S
Sbjct: 121 FVTVYDQLMEGYPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSS 180

Query: 181 REGEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKG 240
           ++GE+E+ LKDI+ERA  KG+FSYSRFFA+GLFRLLELANATEP+IL+KLCAALNI+K+ 
Sbjct: 181 KDGEIEAILKDISERAQGKGSFSYSRFFAVGLFRLLELANATEPTILDKLCAALNINKRS 240

Query: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITK 288
           VDRDLDVYRN+LSKLVQAKELLKEYV+REKKKR+ERS +  +NEA+TK
Sbjct: 241 VDRDLDVYRNILSKLVQAKELLKEYVEREKKKREERSETPKSNEAVTK 277

[Close]
BLAST of ClCG02G001360 vs. Swiss-Prot
Match: THF1_ACAM1 (Protein Thf1 OS=Acaryochloris marina (strain MBIC 11017) GN=thf1 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.9e-37
Identity = 83/219 (37.90%), Postives = 134/219 (61.19%), Query Frame = 1 

Query: 67  DVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQ 126
           ++ TV++TK  F   + RP+ S+Y  V++EL+V+ HL+R    +RYDP+FALG  T +D+
Sbjct: 3   NLRTVSDTKRAFYSIHTRPVNSVYRRVVEELMVEMHLLRVNEDFRYDPIFALGVTTSFDR 62

Query: 127 LMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEF---ASREG- 186
            M+GY  + D+DAIF A  KA   DP Q + D ++L E A+S++A  ++++   A+  G 
Sbjct: 63  FMDGYQPENDKDAIFSAICKAQEADPVQMKKDGQRLTELAQSKSAQEMLDWITQAANSGG 122

Query: 187 -EVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELA--NATE-----PSILEKLCAALN 246
            E++  L++IA+       F YSR FAIGLF LLEL+  N T+        L  +C  LN
Sbjct: 123 DELQWQLRNIAQNP----KFKYSRLFAIGLFTLLELSEGNITQDEESLAEFLPNICTVLN 182

Query: 247 IDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRD 274
           I +  + +DL++YR  L K+ Q ++ + + ++ +KK+R+
Sbjct: 183 ISESKLQKDLEIYRGNLDKIAQVRQAMDDILEAQKKRRE 217

[Close]
BLAST of ClCG02G001360 vs. Swiss-Prot
Match: THF1_TRIEI (Protein Thf1 OS=Trichodesmium erythraeum (strain IMS101) GN=thf1 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.5e-36
Identity = 80/216 (37.04%), Postives = 128/216 (59.26%), Query Frame = 1 

Query: 70  TVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQLME 129
           TV++TK  F   + RPI SIYN V++EL+V+ HL+     Y Y+P +ALG VT +D+ M+
Sbjct: 6   TVSDTKKTFYHFHTRPINSIYNRVIEELLVEMHLISVNVDYSYNPFYALGVVTAFDRFMQ 65

Query: 130 GYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFASREGEVEST-- 189
           GY   ED+ +IF A I+   EDP +YR DAK LE+ A   +A+ ++ +      +++T  
Sbjct: 66  GYSPQEDKTSIFNALIQGQEEDPNKYRSDAKGLEDLAGKISASDILSWICLSKNIDNTQY 125

Query: 190 LKDIAERAGNKGNFSYSRFFAIGLFRLLELANA-------TEPSILEKLCAALNIDKKGV 249
           L+D          F YSR FAIGLF LLE+ +             L+K+C +LN+ ++ +
Sbjct: 126 LQDDLRAISENSKFRYSRLFAIGLFTLLEIVDTELIKEQEKRTEALKKICQSLNLVEEKL 185

Query: 250 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERS 277
            +D+D+Y + L ++ QA+  +++ +   +KKR++RS
Sbjct: 186 LKDIDLYLSNLERVAQARSAMEDTLAAMRKKREKRS 221

[Close]
BLAST of ClCG02G001360 vs. TrEMBL
Match: A0A0A0K3P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046130 PE=3 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 2.0e-154
Identity = 282/298 (94.63%), Postives = 288/298 (96.64%), Query Frame = 1 

Query: 1   MAAVNSISISTLNQCSDRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVIH 60
           MAAVNSIS STLNQCSDRRL +PS RS +SNF  F FRTSVF+HYSRVRASTFSSRMVIH
Sbjct: 1   MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIH 60

Query: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFASR 180
           VTVYDQLMEGYPSDEDR+AIFQAYIKALNEDPEQYRIDAKK EEWARSQTA SLVEFASR
Sbjct: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASR 180

Query: 181 EGEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240
           EGEVES LKDIAERAG+KGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV
Sbjct: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240

Query: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGEYSMQTGL 299
           DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDER+GSQTANEAITKCLGEYSMQTGL
Sbjct: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEYSMQTGL 298

[Close]
BLAST of ClCG02G001360 vs. TrEMBL
Match: A0A061E4M4_THECC (Photosystem II reaction center PSB29 protein OS=Theobroma cacao GN=TCM_007929 PE=3 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.8e-126
Identity = 234/292 (80.14%), Postives = 260/292 (89.04%), Query Frame = 1 

Query: 1   MAAVNSISISTLNQCS-DRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVI 60
           MAAV+S+S+S + Q S DR++ VPS R LASNF+  RFRTSV  H   VR S  +S  V+
Sbjct: 1   MAAVSSLSLSAIGQTSGDRKVNVPSARYLASNFEGLRFRTSVLYHSVGVRGSASASPSVV 60

Query: 61  HCMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALG 120
           HCM A TDV TV+ETKLNFLKAYKRPIPS+YNTVLQELIVQQHLMRYK TYRYD VFALG
Sbjct: 61  HCMCAATDVPTVSETKLNFLKAYKRPIPSVYNTVLQELIVQQHLMRYKWTYRYDAVFALG 120

Query: 121 FVTVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFAS 180
           FVTVYDQLMEGYPSDEDRDAIFQAYIKAL EDP+QYRIDA+KLEEWARSQT++SLVEF+S
Sbjct: 121 FVTVYDQLMEGYPSDEDRDAIFQAYIKALKEDPQQYRIDAQKLEEWARSQTSSSLVEFSS 180

Query: 181 REGEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKG 240
           R+GEVE+ LKDIAERAG  G+FSYSRFFA+GLFRLLELANATEP++LEKLCAALNI+K+ 
Sbjct: 181 RDGEVEAILKDIAERAGRMGSFSYSRFFAVGLFRLLELANATEPTVLEKLCAALNINKRS 240

Query: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGE 292
           VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKR+ERS SQ ANEA+ KCLGE
Sbjct: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERSESQKANEAVKKCLGE 292

[Close]
BLAST of ClCG02G001360 vs. TrEMBL
Match: F6HHI1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0057g00020 PE=3 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 9.8e-125
Identity = 230/292 (78.77%), Postives = 257/292 (88.01%), Query Frame = 1 

Query: 1   MAAVNSISISTLNQCSDRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVIH 60
           MAAV S+S S L Q S+R++PVP+ RS AS F+AFRFR + ++   R  +S+ SSRMV+ 
Sbjct: 1   MAAVTSLSFSALGQSSERKVPVPTTRSFASAFEAFRFRANFYAVGVRSSSSSSSSRMVVQ 60

Query: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMS+ TDV TV+ETK+NFLK YKRPIPSIYNT+LQEL+VQQHLMRYKRTYRYD VFALGF
Sbjct: 61  CMSSVTDVPTVSETKMNFLKNYKRPIPSIYNTLLQELMVQQHLMRYKRTYRYDAVFALGF 120

Query: 121 VTVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFASR 180
           VTVYDQLM+GYPSDEDRD IFQ YIKAL EDPEQYR DA+ LEEWARSQTA+SLVEF+S+
Sbjct: 121 VTVYDQLMDGYPSDEDRDIIFQVYIKALREDPEQYRKDAQMLEEWARSQTASSLVEFSSK 180

Query: 181 EGEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240
           EGEVE  LKDIAERAG KG+FSYSRFFAIGLFRLLELANATEP+ILEKLCAA NI K+ V
Sbjct: 181 EGEVEGILKDIAERAGGKGSFSYSRFFAIGLFRLLELANATEPTILEKLCAAFNISKRSV 240

Query: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGEY 293
           DRDLDVYRNLL+KLVQAKELLKEYVDREKKKR+ER  SQ ANEAITKCLGEY
Sbjct: 241 DRDLDVYRNLLTKLVQAKELLKEYVDREKKKREERVESQKANEAITKCLGEY 292

[Close]
BLAST of ClCG02G001360 vs. TrEMBL
Match: A0A0B0MJ75_GOSAR (Thylakoid formation 1, chloroplastic-like protein OS=Gossypium arboreum GN=F383_18808 PE=3 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 2.8e-124
Identity = 229/293 (78.16%), Postives = 259/293 (88.40%), Query Frame = 1 

Query: 1   MAAVNSISISTLNQCS-DRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVI 60
           MAAV+S+S   + Q S DR+L VPSPR LASNF+ FRFRTS+      +RAST +S  V+
Sbjct: 1   MAAVSSLSFPAIGQTSGDRKLNVPSPRYLASNFEGFRFRTSLLYQSVGLRASTTASPSVV 60

Query: 61  HCMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALG 120
           +CMS  TD  TV+ETK +FLKAYKRPIPS+YNTVLQELIVQQHLMRYK+TYRYD VFALG
Sbjct: 61  YCMSTATDTPTVSETKSSFLKAYKRPIPSVYNTVLQELIVQQHLMRYKKTYRYDAVFALG 120

Query: 121 FVTVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFAS 180
           FVTVYDQLMEGYPSDEDRDAIFQAYI AL EDP+QYR DA+KLEEWAR+QT++SLV+F+S
Sbjct: 121 FVTVYDQLMEGYPSDEDRDAIFQAYINALKEDPQQYRADAQKLEEWARAQTSSSLVKFSS 180

Query: 181 REGEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKG 240
           R+GEVE+ LKDIAERAG+KG+FSYSRFFAIGLFRLLELANATEP++LEKLCAALNIDK+ 
Sbjct: 181 RDGEVEAILKDIAERAGSKGSFSYSRFFAIGLFRLLELANATEPTVLEKLCAALNIDKRS 240

Query: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGEY 293
           VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKR+ERS S  ANEA+ KC GEY
Sbjct: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERSESPKANEAVKKCSGEY 293

[Close]
BLAST of ClCG02G001360 vs. TrEMBL
Match: A0A0D2V4U5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G132100 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 3.7e-124
Identity = 230/293 (78.50%), Postives = 258/293 (88.05%), Query Frame = 1 

Query: 1   MAAVNSISISTLNQCS-DRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVI 60
           MAAV+S+S   + Q S DR+L VPS R LASNF+ FRFRTS+      +RAST +S  V 
Sbjct: 1   MAAVSSLSFPAIGQTSGDRKLNVPSARYLASNFEGFRFRTSLLYQSVGLRASTTASPSVF 60

Query: 61  HCMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALG 120
           +CMS  TD  TV+ETK +FLKAYKRPIPS+YNTVLQELIVQQHLMRYK+TYRYD VFALG
Sbjct: 61  YCMSTATDTPTVSETKSSFLKAYKRPIPSVYNTVLQELIVQQHLMRYKKTYRYDAVFALG 120

Query: 121 FVTVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFAS 180
           FVTVYDQLMEGYPSDEDRDAIFQAYI AL EDP+QYR DA+KLEEWAR+QT++SLVEF+S
Sbjct: 121 FVTVYDQLMEGYPSDEDRDAIFQAYINALKEDPQQYRADAQKLEEWARAQTSSSLVEFSS 180

Query: 181 REGEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKG 240
           R+GEVE+ LKDIAERAG+KG+FSYSRFFAIGLFRLLELANATEP++LEKLCAALNIDK+ 
Sbjct: 181 RDGEVEAILKDIAERAGSKGSFSYSRFFAIGLFRLLELANATEPTVLEKLCAALNIDKRS 240

Query: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGEY 293
           VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKR+ERS S  ANEA+ KCLGEY
Sbjct: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERSESPKANEAVKKCLGEY 293

[Close]
BLAST of ClCG02G001360 vs. TAIR10
Match: AT2G20890.1 (AT2G20890.1 photosystem II reaction center PSB29 protein)

HSP 1 Score: 392.5 bits (1007), Expect = 2.3e-109
Identity = 209/290 (72.07%), Postives = 242/290 (83.45%), Query Frame = 1 

Query: 3   AVNSISISTLNQCSDRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVIHCM 62
           A++S+S   L Q SD+     S R LAS   A R  T  FS  S    ST  S+ +IHCM
Sbjct: 5   AISSLSFPALGQ-SDKISNFASSRPLAS---AIRICTK-FSRLSLNSRST--SKSLIHCM 64

Query: 63  SAGT-DVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGFV 122
           S  T DV  V+ETK  FLKAYKRPIPSIYNTVLQELIVQQHLMRYK+TYRYDPVFALGFV
Sbjct: 65  SNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFV 124

Query: 123 TVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFASRE 182
           TVYDQLMEGYPSD+DRDAIF+AYI+ALNEDP+QYRIDA+K+EEWARSQT+ SLV+F+S+E
Sbjct: 125 TVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKE 184

Query: 183 GEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGVD 242
           G++E+ LKDIA RAG+K  FSYSRFFA+GLFRLLELA+AT+P++L+KLCA+LNI+KK VD
Sbjct: 185 GDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVD 244

Query: 243 RDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGE 292
           RDLDVYRNLLSKLVQAKELLKEYV+REKKK+ ER+ SQ ANE I+KCLG+
Sbjct: 245 RDLDVYRNLLSKLVQAKELLKEYVEREKKKQGERAQSQKANETISKCLGD 287

[Close]
BLAST of ClCG02G001360 vs. NCBI nr
Match: gi|659110691|ref|XP_008455361.1| (PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Cucumis melo])

HSP 1 Score: 561.2 bits (1445), Expect = 1.1e-156
Identity = 283/298 (94.97%), Postives = 291/298 (97.65%), Query Frame = 1 

Query: 1   MAAVNSISISTLNQCSDRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVIH 60
           MAAVNSIS STLNQCSDRR PVPS RSL+SNFD FRFRTS+F+HYSRVR STFSSRMVIH
Sbjct: 1   MAAVNSISFSTLNQCSDRRFPVPSSRSLSSNFDGFRFRTSLFTHYSRVRPSTFSSRMVIH 60

Query: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFASR 180
           VTVYDQLMEGYPSDEDR+AIFQAYIKALNEDPEQYRIDA+KLEEWARSQTA SLVEFASR
Sbjct: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQTAASLVEFASR 180

Query: 181 EGEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240
           EGEVES LKDIAERAG+KGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV
Sbjct: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240

Query: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGEYSMQTGL 299
           DRDLDVYRNLLSKLVQAKELLKEY+DREKKKRDER+GSQTANEAITKCLGEYSMQTGL
Sbjct: 241 DRDLDVYRNLLSKLVQAKELLKEYIDREKKKRDERAGSQTANEAITKCLGEYSMQTGL 298

[Close]
BLAST of ClCG02G001360 vs. NCBI nr
Match: gi|449438054|ref|XP_004136805.1| (PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Cucumis sativus])

HSP 1 Score: 553.1 bits (1424), Expect = 2.9e-154
Identity = 282/298 (94.63%), Postives = 288/298 (96.64%), Query Frame = 1 

Query: 1   MAAVNSISISTLNQCSDRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVIH 60
           MAAVNSIS STLNQCSDRRL +PS RS +SNF  F FRTSVF+HYSRVRASTFSSRMVIH
Sbjct: 1   MAAVNSISFSTLNQCSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMVIH 60

Query: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFASR 180
           VTVYDQLMEGYPSDEDR+AIFQAYIKALNEDPEQYRIDAKK EEWARSQTA SLVEFASR
Sbjct: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFASR 180

Query: 181 EGEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240
           EGEVES LKDIAERAG+KGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV
Sbjct: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240

Query: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGEYSMQTGL 299
           DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDER+GSQTANEAITKCLGEYSMQTGL
Sbjct: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEYSMQTGL 298

[Close]
BLAST of ClCG02G001360 vs. NCBI nr
Match: gi|694324363|ref|XP_009353207.1| (PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Pyrus x bretschneideri])

HSP 1 Score: 460.3 bits (1183), Expect = 2.6e-126
Identity = 227/295 (76.95%), Postives = 262/295 (88.81%), Query Frame = 1 

Query: 1   MAAVNSISISTLNQCSDRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVIH 60
           MAAV S+S S L+QCSDR+  V   R+L SN +  RFRTS+ SHY  +RAS++SSRMV+H
Sbjct: 1   MAAVASLSFSALSQCSDRKSVVSPARNLGSNAEGIRFRTSISSHYGGIRASSWSSRMVVH 60

Query: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CM+  +D  TVA+TKLNFLKAYKRPIPS+YN+VLQELIVQQHLM+YKRTYRYDPVFALGF
Sbjct: 61  CMAGSSDSPTVADTKLNFLKAYKRPIPSVYNSVLQELIVQQHLMKYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFASR 180
           VTVYDQLM+GYPSDEDR+AIFQAYIKALNEDPEQYR DA+KLEEWAR+QT++SLVEF SR
Sbjct: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRTDAQKLEEWARAQTSSSLVEFPSR 180

Query: 181 EGEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240
           EGEVE+ LKDIAERA  K +FSYSRFFAIGLFRLLE+A ATEP++LEKLCAALNIDK+ V
Sbjct: 181 EGEVEAALKDIAERAAGKESFSYSRFFAIGLFRLLEVAKATEPTVLEKLCAALNIDKRSV 240

Query: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGEYSMQ 296
           DRDLDVYRNLLSKLVQAKELL+EYV REKKKR+ER+ +Q A+E +TKCLG+Y  Q
Sbjct: 241 DRDLDVYRNLLSKLVQAKELLREYVAREKKKREERAETQKASETVTKCLGDYVCQ 295

[Close]
BLAST of ClCG02G001360 vs. NCBI nr
Match: gi|590690275|ref|XP_007043465.1| (Photosystem II reaction center PSB29 protein [Theobroma cacao])

HSP 1 Score: 460.3 bits (1183), Expect = 2.6e-126
Identity = 234/292 (80.14%), Postives = 260/292 (89.04%), Query Frame = 1 

Query: 1   MAAVNSISISTLNQCS-DRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVI 60
           MAAV+S+S+S + Q S DR++ VPS R LASNF+  RFRTSV  H   VR S  +S  V+
Sbjct: 1   MAAVSSLSLSAIGQTSGDRKVNVPSARYLASNFEGLRFRTSVLYHSVGVRGSASASPSVV 60

Query: 61  HCMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALG 120
           HCM A TDV TV+ETKLNFLKAYKRPIPS+YNTVLQELIVQQHLMRYK TYRYD VFALG
Sbjct: 61  HCMCAATDVPTVSETKLNFLKAYKRPIPSVYNTVLQELIVQQHLMRYKWTYRYDAVFALG 120

Query: 121 FVTVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFAS 180
           FVTVYDQLMEGYPSDEDRDAIFQAYIKAL EDP+QYRIDA+KLEEWARSQT++SLVEF+S
Sbjct: 121 FVTVYDQLMEGYPSDEDRDAIFQAYIKALKEDPQQYRIDAQKLEEWARSQTSSSLVEFSS 180

Query: 181 REGEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKG 240
           R+GEVE+ LKDIAERAG  G+FSYSRFFA+GLFRLLELANATEP++LEKLCAALNI+K+ 
Sbjct: 181 RDGEVEAILKDIAERAGRMGSFSYSRFFAVGLFRLLELANATEPTVLEKLCAALNINKRS 240

Query: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGE 292
           VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKR+ERS SQ ANEA+ KCLGE
Sbjct: 241 VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERSESQKANEAVKKCLGE 292

[Close]
BLAST of ClCG02G001360 vs. NCBI nr
Match: gi|658025445|ref|XP_008348123.1| (PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Malus domestica])

HSP 1 Score: 459.5 bits (1181), Expect = 4.4e-126
Identity = 228/295 (77.29%), Postives = 260/295 (88.14%), Query Frame = 1 

Query: 1   MAAVNSISISTLNQCSDRRLPVPSPRSLASNFDAFRFRTSVFSHYSRVRASTFSSRMVIH 60
           MAAV S+S S L+QCSDR+  V S R+L SN +  RFRTS+ SHY  +RAS+ SSRMV+H
Sbjct: 1   MAAVASLSFSALSQCSDRKSVVSSARNLGSNAEGIRFRTSISSHYGGIRASSSSSRMVVH 60

Query: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CM+  +D  TVA+TKLNFLKAYKRPIPS+YN+VLQELIVQQHLM+YKRTYRYDPVFALGF
Sbjct: 61  CMAGSSDAPTVADTKLNFLKAYKRPIPSVYNSVLQELIVQQHLMKYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMEGYPSDEDRDAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTATSLVEFASR 180
           VTVYDQLM+GYPSDEDR+AIFQAYIKALNEDPEQYR DA+KLEEWAR+QT++SLVEF SR
Sbjct: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRTDAQKLEEWARAQTSSSLVEFPSR 180

Query: 181 EGEVESTLKDIAERAGNKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKKGV 240
           EGEVE  LKDIAERA  K +FSYSRFFAIGLFRLLE+A ATEP++LEKLCAALNIDK+ V
Sbjct: 181 EGEVEVALKDIAERAAGKESFSYSRFFAIGLFRLLEVAKATEPTVLEKLCAALNIDKRSV 240

Query: 241 DRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERSGSQTANEAITKCLGEYSMQ 296
           DRDLDVYRNLLSKLVQAKELL+EYV REKKKR+ER  +Q A+E +TKCLG+Y  Q
Sbjct: 241 DRDLDVYRNLLSKLVQAKELLREYVAREKKKREERVETQKASETVTKCLGDYVCQ 295

The following BLAST results are available for this feature:
BLAST of ClCG02G001360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
THF1_SOLTU1.2e-11068.94Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum tuberosum GN=THF1 PE=2 SV... [more]
THF1_ARATH4.1e-10872.07Protein THYLAKOID FORMATION 1, chloroplastic OS=Arabidopsis thaliana GN=THF1 PE=... [more]
THF1_ORYSJ3.4e-10268.40Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=T... [more]
THF1_ACAM12.9e-3737.90Protein Thf1 OS=Acaryochloris marina (strain MBIC 11017) GN=thf1 PE=3 SV=1[more]
THF1_TRIEI5.5e-3637.04Protein Thf1 OS=Trichodesmium erythraeum (strain IMS101) GN=thf1 PE=3 SV=1[more]
BLAST of ClCG02G001360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3P0_CUCSA2.0e-15494.63Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046130 PE=3 SV=1[more]
A0A061E4M4_THECC1.8e-12680.14Photosystem II reaction center PSB29 protein OS=Theobroma cacao GN=TCM_007929 PE... [more]
F6HHI1_VITVI9.8e-12578.77Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0057g00020 PE=3 SV=... [more]
A0A0B0MJ75_GOSAR2.8e-12478.16Thylakoid formation 1, chloroplastic-like protein OS=Gossypium arboreum GN=F383_... [more]
A0A0D2V4U5_GOSRA3.7e-12478.50Uncharacterized protein OS=Gossypium raimondii GN=B456_012G132100 PE=3 SV=1[more]
BLAST of ClCG02G001360 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G20890.12.3e-10972.07 photosystem II reaction center PSB29 protein[more]
BLAST of ClCG02G001360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110691|ref|XP_008455361.1|1.1e-15694.97PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Cucumis melo][more]
gi|449438054|ref|XP_004136805.1|2.9e-15494.63PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Cucumis sativus][more]
gi|694324363|ref|XP_009353207.1|2.6e-12676.95PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Pyrus x bretschneid... [more]
gi|590690275|ref|XP_007043465.1|2.6e-12680.14Photosystem II reaction center PSB29 protein [Theobroma cacao][more]
gi|658025445|ref|XP_008348123.1|4.4e-12677.29PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Malus domestica][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0045038 protein import into chloroplast thylakoid membrane
biological_process GO:0015979 photosynthesis
biological_process GO:0042793 transcription from plastid promoter
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0009902 chloroplast relocation
biological_process GO:0006417 regulation of translation
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006364 rRNA processing
biological_process GO:0045037 protein import into chloroplast stroma
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
biological_process GO:0042742 defense response to bacterium
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0010319 stromule
cellular_component GO:0005575 cellular_component
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009527 plastid outer membrane
cellular_component GO:0009528 plastid inner membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009941 chloroplast envelope
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G001360.1ClCG02G001360.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG02G001360Csa7G046130Cucumber (Chinese Long) v2cuwcgB546
ClCG02G001360MELO3C018772Melon (DHL92) v3.5.1mewcgB195
ClCG02G001360Cla007720Watermelon (97103) v1wcgwmB206
ClCG02G001360Cla97C02G027820Watermelon (97103) v2wcgwmbB138
ClCG02G001360Bhi05G001568Wax gourdwcgwgoB276
ClCG02G001360CSPI07G04230Wild cucumber (PI 183967)cpiwcgB574
ClCG02G001360Cucsa.148030Cucumber (Gy14) v1cgywcgB248
ClCG02G001360CmaCh11G018540Cucurbita maxima (Rimu)cmawcgB102
ClCG02G001360CmaCh19G009590Cucurbita maxima (Rimu)cmawcgB460
ClCG02G001360CmoCh19G009890Cucurbita moschata (Rifu)cmowcgB459
ClCG02G001360CmoCh11G019300Cucurbita moschata (Rifu)cmowcgB094
ClCG02G001360Lsi11G015090Bottle gourd (USVL1VR-Ls)lsiwcgB097
ClCG02G001360Cp4.1LG15g07800Cucurbita pepo (Zucchini)cpewcgB233
ClCG02G001360Cp4.1LG04g03250Cucurbita pepo (Zucchini)cpewcgB596
ClCG02G001360CsGy7G003860Cucumber (Gy14) v2cgybwcgB506
ClCG02G001360MELO3C018772.2Melon (DHL92) v3.6.1medwcgB190
ClCG02G001360Carg19098Silver-seed gourdcarwcgB0696
ClCG02G001360CsaV3_7G004070Cucumber (Chinese Long) v3cucwcgB571
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG02G001360Silver-seed gourdcarwcgB0032
ClCG02G001360Silver-seed gourdcarwcgB0329
ClCG02G001360Silver-seed gourdcarwcgB0624
ClCG02G001360Silver-seed gourdcarwcgB0851
ClCG02G001360Cucumber (Chinese Long) v3cucwcgB036
ClCG02G001360Cucumber (Chinese Long) v3cucwcgB476
ClCG02G001360Watermelon (97103) v2wcgwmbB155
ClCG02G001360Wax gourdwcgwgoB295
ClCG02G001360Wax gourdwcgwgoB310
ClCG02G001360Watermelon (Charleston Gray)wcgwcgB088
ClCG02G001360Watermelon (Charleston Gray)wcgwcgB123
ClCG02G001360Cucumber (Gy14) v1cgywcgB023
ClCG02G001360Cucurbita maxima (Rimu)cmawcgB190
ClCG02G001360Cucurbita maxima (Rimu)cmawcgB532
ClCG02G001360Cucurbita maxima (Rimu)cmawcgB580
ClCG02G001360Cucurbita moschata (Rifu)cmowcgB181
ClCG02G001360Cucurbita moschata (Rifu)cmowcgB484
ClCG02G001360Cucurbita moschata (Rifu)cmowcgB529
ClCG02G001360Cucurbita moschata (Rifu)cmowcgB576
ClCG02G001360Wild cucumber (PI 183967)cpiwcgB036
ClCG02G001360Wild cucumber (PI 183967)cpiwcgB478
ClCG02G001360Cucumber (Chinese Long) v2cuwcgB032
ClCG02G001360Cucumber (Chinese Long) v2cuwcgB456
ClCG02G001360Melon (DHL92) v3.5.1mewcgB146
ClCG02G001360Melon (DHL92) v3.5.1mewcgB519
ClCG02G001360Watermelon (97103) v1wcgwmB183
ClCG02G001360Watermelon (97103) v1wcgwmB194
ClCG02G001360Cucurbita pepo (Zucchini)cpewcgB665
ClCG02G001360Bottle gourd (USVL1VR-Ls)lsiwcgB060
ClCG02G001360Bottle gourd (USVL1VR-Ls)lsiwcgB128
ClCG02G001360Melon (DHL92) v3.6.1medwcgB137
ClCG02G001360Melon (DHL92) v3.6.1medwcgB514