Cucsa.114210 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTCGGCGGAGTCTCCATTTCGTCTTCATATTCAAAGTGATTCTATTCCTGAGGAGGAACAACAAAACAAAGCTCTTCGATTTTTGCTTTCCAGATTTGGGAAACCTAAATCTGTAAACCAAATAAACGAAGAACCAGATTAAGAAAGAGAGAATACCGGCGAGATATGGCCCGGAGACCTGACGATGACTATGATTATCTCTTCAAAGTTGTGCTTATCGGTGATTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCTACCATTGGCGTCGAATTCGCTACTCGTACTCTTCAGGTATATCTCTCCCTCTCTCTCTCCCCCTCTTCATTTCTCTCTCATTGTCTCTCATTGGGTATTTATATCTTTGTGGCGTTGTGTGTTTCTATGCTTTGCATTCTCGATCTGTGTGTAAATCTGCATTTGGATTGATTTTGGAACTCGAGTTTTTTTTTtAAAAAAAAaGAACAATTTATTTGTTGTAATTCAAGAAATGATCTGTTTTCTCTTTCGGATCTGTGTTCTCAATTAGTTGTTCTGGTTGTGTTTTCATTTTAAGTTTGAGGAATGCGGGAACTTATTCATTTCTTTACTGATCTGGATTTGGATGATGAATCGAGAAAATTGCGTGTAGATTTGATTAGGTATATCTTTTTATGAGAGTTGTTCAAATTCCGATCCAGGTATGAGTATTTGATTTCATTCTAACTTTTAATGGAGATATATCTGTCGATCATAATTGGTTGTTTTATTACCATTTAGTCTAGTCTTTATAACTATAATGCCATACTTTAAAAATACGAATCTGAATTAATGACTCCTTTCCTGGAAATGCAATTATTGTTTCAGTTTACCTTTCTTTCATTCCTTCATTTCCATTTTGGTTTGCAATTTGACTCTTTCAAAAAATTCGAAAGCAATTCTGAAGAGGACAAGCATTTTACAAATACTTAGAAAAAaTTAAGAAACATTTATAAATCTAGCCGCAaaCGTTGATTTACAATGCAATATGTGGTTGCTTAAATATCAGTTTCTTGGTATTTGGTTGATATCTGGGAAGTGTTATATGGTTAGTATCCTACTAACACATATACATGTTTTGATAATAGATTTTGGATCTTCTTAGATTGTCTTGTCTTGAAATGGCTATGTTATATTAGTGGCACATTTGTCGAACCAAACAATGCCATAATCTGGATCTATGCAGAATGAGTGAAACTTTTGTTATATCTGTTCATATCCTGCTAAAGATGTTGGTTTTCATTTTCGTTTGACTCATAAGCTGAGTTAACTTGGAACGCGGTGGTGACTCCTTGCTAAATGACTGGAACTGTTTGGTTTTTTGGATATCTGTTTGTGAAATTTGATATATGACCTTTTCTTTTTGGCCCTCTCTTTGGACTTAAATTACAGGCACAAAATTTCCTTTTCTGATTTTTGCCTATGAACTTGGTCTTTGTTTTATAAATTCAACAGAACGTTTTGGATATACAAAGAAAACAACTTTCGATCATTTGTTTACTGCTTATATCACATTTTAGCCTTGAGGTGGAATTTGAGGGTTCATGATGAAGAAGGGATTCATTATATTTATTATTATGCTTTGATTATGAAAGTTATCAAGAAAAAGAAATGCTGCATTATCTTAGGTCGAGGGAAGAACTGTGAAAGCTCAGATATGGGACACAGCCGGTCAAGAGCGTTACAGAGCAATAACAAGTGCTTACTATAGGGGTGCACTTGGAGCCCTTCTAGTCTATGATGTAACAAAACCAATGACATTCGATAACGTAAGCCGTTGGTTGAAGGAACTTAGGGACCATGCCGATTCCAACATTGTAATCATGTTAATTGGAAACAAGACTGATCTGAAACACCTCCGAGCAGTGGCGACAGAGGATGCACAAAGCTATGCTGAGAAAGAAGGATTATCATTCATTGAAACGTCTGCTCTCGAAGCAACAAACGTGGAGAAGGCTTTCCAAACTATTCTTTCCGAAATATATCGAATAATCAGTAAAAAATCCCTTAATTCAGAGGAGCCTGCTGCTGCTAATAACATCAAGGAAGGAAAAaCCATTGTGGTTGGTGAGTCAGAGGCCAATACAAAGAAGGCTTGTTGCTCCTCTTCTTGAAGTTCAACAATTTTtGtAACTCTCTCTCTCTCTCTCTCTCTTATTTGTCATTTGCTTGTTCATTTCTTCCTAGTTACCAACTCTCTTCTGTTATTTGTTTGCTTTTGGATTGTGTTGGTGTATAATTTACATATAATTTATATTTTtACTTAGATTTATTATTATTATTATTATTTTCTTCATTATGTAGCCCAAGGGATCATTGAAATCTCTTGTCAGACACTAATGAGAGGTTCATTTCAGGGACTGTCTGTTTCTATGGAATCTCTATGTTGGAGAATCAAATATGTGAATGTCTGGTGGAGCTTTTAGTTTTT AGTCGGCGGAGTCTCCATTTCGTCTTCATATTCAAAGTGATTCTATTCCTGAGGAGGAACAACAAAACAAAGCTCTTCGATTTTTGCTTTCCAGATTTGGGAAACCTAAATCTGTAAACCAAATAAACGAAGAACCAGATTAAGAAAGAGAGAATACCGGCGAGATATGGCCCGGAGACCTGACGATGACTATGATTATCTCTTCAAAGTTGTGCTTATCGGTGATTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCTACCATTGGCGTCGAATTCGCTACTCGTACTCTTCAGGTCGAGGGAAGAACTGTGAAAGCTCAGATATGGGACACAGCCGGTCAAGAGCGTTACAGAGCAATAACAAGTGCTTACTATAGGGGTGCACTTGGAGCCCTTCTAGTCTATGATGTAACAAAACCAATGACATTCGATAACGTAAGCCGTTGGTTGAAGGAACTTAGGGACCATGCCGATTCCAACATTGTAATCATGTTAATTGGAAACAAGACTGATCTGAAACACCTCCGAGCAGTGGCGACAGAGGATGCACAAAGCTATGCTGAGAAAGAAGGATTATCATTCATTGAAACGTCTGCTCTCGAAGCAACAAACGTGGAGAAGGCTTTCCAAACTATTCTTTCCGAAATATATCGAATAATCAGTAAAAAATCCCTTAATTCAGAGGAGCCTGCTGCTGCTAATAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAGTCAGAGGCCAATACAAAGAAGGCTTGTTGCTCCTCTTCTTGAAGTTCAACAATTTTTGTAActctctctctctctctctctctTATTTGTCATTTGCTTGTTCATTTCTTCCTAGTTACCAACTCTCTTCTGTTATTTGTTTGCTTTTGGATTGTGTTGGTGtataatttacatataatttatatttttaCTTAGATttattattattattattattTTCTTCATTATGTAGCCCAAGGGATCATTGAAATCTCTTGTCAGACACTAATGAGAGGTTCATTTCAGGGACTGTCTGTTTCTATGGAATCTCTATGTTGGAGAATCAAATATGTGAATGTCTGGTGGAGCTTTTAGTTTTT ATGGCCCGGAGACCTGACGATGACTATGATTATCTCTTCAAAGTTGTGCTTATCGGTGATTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCTACCATTGGCGTCGAATTCGCTACTCGTACTCTTCAGGTCGAGGGAAGAACTGTGAAAGCTCAGATATGGGACACAGCCGGTCAAGAGCGTTACAGAGCAATAACAAGTGCTTACTATAGGGGTGCACTTGGAGCCCTTCTAGTCTATGATGTAACAAAACCAATGACATTCGATAACGTAAGCCGTTGGTTGAAGGAACTTAGGGACCATGCCGATTCCAACATTGTAATCATGTTAATTGGAAACAAGACTGATCTGAAACACCTCCGAGCAGTGGCGACAGAGGATGCACAAAGCTATGCTGAGAAAGAAGGATTATCATTCATTGAAACGTCTGCTCTCGAAGCAACAAACGTGGAGAAGGCTTTCCAAACTATTCTTTCCGAAATATATCGAATAATCAGTAAAAAATCCCTTAATTCAGAGGAGCCTGCTGCTGCTAATAACATCAAGGAAGGAAAAaCCATTGTGGTTGGTGAGTCAGAGGCCAATACAAAGAAGGCTTGTTGCTCCTCTTCTTGA MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPAAANNIKEGKTIVVGESEANTKKACCSSS*
BLAST of Cucsa.114210 vs. Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 6.9e-105 Identity = 195/217 (89.86%), Postives = 205/217 (94.47%), Query Frame = 1
BLAST of Cucsa.114210 vs. Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 336.3 bits (861), Expect = 2.5e-91 Identity = 169/217 (77.88%), Postives = 189/217 (87.10%), Query Frame = 1
BLAST of Cucsa.114210 vs. Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 3.3e-91 Identity = 167/215 (77.67%), Postives = 193/215 (89.77%), Query Frame = 1
BLAST of Cucsa.114210 vs. Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 2.2e-90 Identity = 164/216 (75.93%), Postives = 190/216 (87.96%), Query Frame = 1
BLAST of Cucsa.114210 vs. Swiss-Prot
Match: RAA2B_ARATH (Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2 SV=2) HSP 1 Score: 332.4 bits (851), Expect = 3.7e-90 Identity = 167/215 (77.67%), Postives = 189/215 (87.91%), Query Frame = 1
BLAST of Cucsa.114210 vs. TrEMBL
Match: A0A0A0L6P8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110590 PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 1.8e-115 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1
BLAST of Cucsa.114210 vs. TrEMBL
Match: A0A059AU03_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02784 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 2.3e-107 Identity = 205/216 (94.91%), Postives = 210/216 (97.22%), Query Frame = 1
BLAST of Cucsa.114210 vs. TrEMBL
Match: A0A061DWD1_THECC (RAB GTPase 11C OS=Theobroma cacao GN=TCM_006132 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 3.0e-107 Identity = 202/216 (93.52%), Postives = 210/216 (97.22%), Query Frame = 1
BLAST of Cucsa.114210 vs. TrEMBL
Match: B9SKB2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0757660 PE=4 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 8.8e-107 Identity = 203/216 (93.98%), Postives = 208/216 (96.30%), Query Frame = 1
BLAST of Cucsa.114210 vs. TrEMBL
Match: A0A067L1Z8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00259 PE=4 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 9.7e-106 Identity = 201/216 (93.06%), Postives = 208/216 (96.30%), Query Frame = 1
BLAST of Cucsa.114210 vs. TAIR10
Match: AT1G09630.1 (AT1G09630.1 RAB GTPase 11C) HSP 1 Score: 381.3 bits (978), Expect = 3.9e-106 Identity = 195/217 (89.86%), Postives = 205/217 (94.47%), Query Frame = 1
BLAST of Cucsa.114210 vs. TAIR10
Match: AT3G46830.1 (AT3G46830.1 RAB GTPase homolog A2C) HSP 1 Score: 336.3 bits (861), Expect = 1.4e-92 Identity = 169/217 (77.88%), Postives = 189/217 (87.10%), Query Frame = 1
BLAST of Cucsa.114210 vs. TAIR10
Match: AT1G07410.1 (AT1G07410.1 RAB GTPase homolog A2B) HSP 1 Score: 332.4 bits (851), Expect = 2.1e-91 Identity = 167/215 (77.67%), Postives = 189/215 (87.91%), Query Frame = 1
BLAST of Cucsa.114210 vs. TAIR10
Match: AT5G59150.1 (AT5G59150.1 RAB GTPase homolog A2D) HSP 1 Score: 330.5 bits (846), Expect = 7.9e-91 Identity = 166/217 (76.50%), Postives = 189/217 (87.10%), Query Frame = 1
BLAST of Cucsa.114210 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F) HSP 1 Score: 298.1 bits (762), Expect = 4.3e-81 Identity = 151/218 (69.27%), Postives = 184/218 (84.40%), Query Frame = 1
BLAST of Cucsa.114210 vs. NCBI nr
Match: gi|449431866|ref|XP_004133721.1| (PREDICTED: ras-related protein RABA2a [Cucumis sativus]) HSP 1 Score: 423.3 bits (1087), Expect = 2.5e-115 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1
BLAST of Cucsa.114210 vs. NCBI nr
Match: gi|659102651|ref|XP_008452243.1| (PREDICTED: ras-related protein RABA2a [Cucumis melo]) HSP 1 Score: 422.2 bits (1084), Expect = 5.6e-115 Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 1
BLAST of Cucsa.114210 vs. NCBI nr
Match: gi|702469289|ref|XP_010030204.1| (PREDICTED: ras-related protein RABA2a [Eucalyptus grandis]) HSP 1 Score: 396.4 bits (1017), Expect = 3.3e-107 Identity = 205/216 (94.91%), Postives = 210/216 (97.22%), Query Frame = 1
BLAST of Cucsa.114210 vs. NCBI nr
Match: gi|590681777|ref|XP_007041174.1| (RAB GTPase 11C [Theobroma cacao]) HSP 1 Score: 396.0 bits (1016), Expect = 4.3e-107 Identity = 202/216 (93.52%), Postives = 210/216 (97.22%), Query Frame = 1
BLAST of Cucsa.114210 vs. NCBI nr
Match: gi|255570960|ref|XP_002526431.1| (PREDICTED: ras-related protein RABA2a [Ricinus communis]) HSP 1 Score: 394.4 bits (1012), Expect = 1.3e-106 Identity = 203/216 (93.98%), Postives = 208/216 (96.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|