CmoCh04G009600 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G009600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RAN GTPase 3
Location	Cmo_Chr04 : 4888085 .. 4890260 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGGTAGTTTTGGGCATAGAAGTTGGTGACAGTCGCAGTATTTGAAGTCGGCTGTCTCTCCGTATTGTCTACATTTTCGAAGTGGGGCACCCGATTTGGGAGGGACAATTTCTTCAATTTTGCTTTCCGAGATTTCGGAAAGCTAAATCTTCAGAACCAGGAACCAGAGAGAGAGAGAGACCAGCGAGATAATATGGCCCGGAGACCCGACGATGACTACGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCCGGCGTTGGAAAATCCAACCTTCTTTCCCGGTTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTCTCTCTCTCAATTTTCTCTCTCATTTCGGTATTTATATCTACGTTCGTTGTATGTTTGTGTGCTTTACATTCTCGATCTATGTAAAAATTCGCGGGAACGCGAATTTTTTTTTGGAGAATTTTTTTGATGTACTTAAAGTAATGATCTGATTTTCTTTTTTCCGTTTAAAACTGGCGGTTTTTATTTGAATTGAGATTGTGCATCTTCGCTTGCGGATCTGCGTTCTCAATTGGTTGTTCTGGTAATTTTCGTTTTAATTTAGGGGAATGCGGGAAATTGGTCGTCTTTTTACTGCTTTGGATTAGGACAACGAATTGAGAAAAATGTCTATGGATTTGTTTAGGTTTATAACTTTTGATTGAAGTTATTCAGATTCTGATCTGGTATGGGCTAGAGATTTCATCCTAACTTTTAATGGAGATACATCTGCAGATCATGATTGGTTGTTTTTATGCCGGTTAATTTCCCACAAAACCTTAACGCCAAATATGAATCTGAATTAACGACTCCTTTTCTGGTAATACAATTATTATCTTGGTTCTTATACAAATTTTGATTATGCAAATTTACAGTTTAAACCATTCGAGTGTTTTATAAAGGACAAGCATTTTACAAATTGTTAAACAATGAAGAATCATATACAATTCTTCTACCCGCAACACCTGATTTACACTGCAGTATGAGGTCATTTAAATCTCAGTTTCTTGGACTATGGCTGGTAGATAGAATTTTTTATTTAGTTTGTGTCCTGTTACACATGTAGATGTTTTGATAATAGATTTTGGAACTTCTTGGATCGATGTCGTATTCAAATGGCTATGTGATATTAGTGTCACATTTGTTGAGCTGAAAGAAAATATTCTCTTTTTTCTTTTTCTACTGCGCTTTGACTATCAAAGTTACCAAGAAAAGAAATGCTACATACTTTATATTAGGTTGAGGGAAGAACCGTGAAAGCTCAGATATGGGACACGGCCGGTCAAGAGCGTTACAGAGCAATAACCAGTGCTTACTATAGGGGTGCCCTCGGAGCCCTTCTAGTATACGATGTAACGAAACCGATGACTTTCGACAATGTAAACCGTTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGTAACAAGACCGATCTGAAACACCTCCGAGCAGTGGCAACAGAAGACGCACAGAGCTACGCCGAGAAAGAAGGGCTGTCATTCATTGAAACTTCGGCTCTTGAAGCAACAAACGTGGAGAAGGCTTTCCAAACCATTCTCTCAGAGATATATAGGATAATCAGTAAGAAGTCCCTCAATTCGGATGAGCCTGCTACTGCTAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCAGAGGACAATTCGAAGAAGGCTTGTTGCTCCTCTTCTTAAGTTCAGAAAAATATCCCCACAATTTTTTGTAACTCTCCTCTCTCTCTCTCTCTCCCTCTTTTCTTGGTCATCTGCTTACGCATATCTTTCTAGTTACCAACTCTATTCTGTTATTCTTGTTTGCTTGGATTTTGTTGGTGTATAATTTTCATATAATTTATATTTTACTTAGATTTTTTTTTTTCAAGAGATCATTGAGATCTCATGTCAGAAACACTATTGAGCGGTTCATTTCAGAGTTTGTCTGTTTTTATGGAATCTCTATGTTGGAGAATCAAATGTGAATGTCTTATTTTAATATCCGTGAGGCTTATGTGTATGCAACTAGTTTTTGGTCTTAGGAACTGTTGATTTTAAAGTGGCTATGGACCATATTCTTTCTAACATACTTGAGTA

mRNA sequence

AAGGGTAGTTTTGGGCATAGAAGTTGGTGACAGTCGCAGTATTTGAAGTCGGCTGTCTCTCCGTATTGTCTACATTTTCGAAGTGGGGCACCCGATTTGGGAGGGACAATTTCTTCAATTTTGCTTTCCGAGATTTCGGAAAGCTAAATCTTCAGAACCAGGAACCAGAGAGAGAGAGAGACCAGCGAGATAATATGGCCCGGAGACCCGACGATGACTACGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCCGGCGTTGGAAAATCCAACCTTCTTTCCCGGTTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACCGTGAAAGCTCAGATATGGGACACGGCCGGTCAAGAGCGTTACAGAGCAATAACCAGTGCTTACTATAGGGGTGCCCTCGGAGCCCTTCTAGTATACGATGTAACGAAACCGATGACTTTCGACAATGTAAACCGTTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGTAACAAGACCGATCTGAAACACCTCCGAGCAGTGGCAACAGAAGACGCACAGAGCTACGCCGAGAAAGAAGGGCTGTCATTCATTGAAACTTCGGCTCTTGAAGCAACAAACGTGGAGAAGGCTTTCCAAACCATTCTCTCAGAGATATATAGGATAATCAGTAAGAAGTCCCTCAATTCGGATGAGCCTGCTACTGCTAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCAGAGGACAATTCGAAGAAGGCTTGTTGCTCCTCTTCTTAAGTTCAGAAAAATATCCCCACAATTTTTTGTAACTCTCCTCTCTCTCTCTCTCTCCCTCTTTTCTTGGTCATCTGCTTACGCATATCTTTCTAGTTACCAACTCTATTCTGTTATTCTTGTTTGCTTGGATTTTGTTGGTGTATAATTTTCATATAATTTATATTTTACTTAGATTTTTTTTTTTCAAGAGATCATTGAGATCTCATGTCAGAAACACTATTGAGCGGTTCATTTCAGAGTTTGTCTGTTTTTATGGAATCTCTATGTTGGAGAATCAAATGTGAATGTCTTATTTTAATATCCGTGAGGCTTATGTGTATGCAACTAGTTTTTGGTCTTAGGAACTGTTGATTTTAAAGTGGCTATGGACCATATTCTTTCTAACATACTTGAGTA

Coding sequence (CDS)

ATGGCCCGGAGACCCGACGATGACTACGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCCGGCGTTGGAAAATCCAACCTTCTTTCCCGGTTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACCGTGAAAGCTCAGATATGGGACACGGCCGGTCAAGAGCGTTACAGAGCAATAACCAGTGCTTACTATAGGGGTGCCCTCGGAGCCCTTCTAGTATACGATGTAACGAAACCGATGACTTTCGACAATGTAAACCGTTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGTAACAAGACCGATCTGAAACACCTCCGAGCAGTGGCAACAGAAGACGCACAGAGCTACGCCGAGAAAGAAGGGCTGTCATTCATTGAAACTTCGGCTCTTGAAGCAACAAACGTGGAGAAGGCTTTCCAAACCATTCTCTCAGAGATATATAGGATAATCAGTAAGAAGTCCCTCAATTCGGATGAGCCTGCTACTGCTAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCAGAGGACAATTCGAAGAAGGCTTGTTGCTCCTCTTCTTAA

Homology

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BLAST of CmoCh04G009600 vs. Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 5.8e-104
Identity = 196/217 (90.32%), Postives = 206/217 (94.93%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSDE-PATANIKEGKTI-VVGESEDNSKKACCSSS 216
           S++SD+  A ANIKEG+TI V   SE N+KK CCSSS
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of CmoCh04G009600 vs. Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4)

HSP 1 Score: 331.3 bits (848), Expect = 8.1e-90
Identity = 168/217 (77.42%), Postives = 187/217 (86.18%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLSF+ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSDEPATANIK---EGKTIVVGESEDNSKKACCSS 215
           +L + E A AN     +G TI V ++   +K+ACCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of CmoCh04G009600 vs. Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 8.1e-90
Identity = 164/214 (76.64%), Postives = 189/214 (88.32%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DLKHLRAV+ ED Q+ AEKEGLSF+ETSALEA N+EKAFQTIL+EIY IISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEDNSKKACCSS 215
           +L + E ++    +G TI V ++  N +++CCS+
Sbjct: 181 ALAAQEASSNLPGQGTTINVADASANQRRSCCST 214

[Close]

BLAST of CmoCh04G009600 vs. Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.0e-88
Identity = 165/217 (76.04%), Postives = 189/217 (87.10%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLRAV+ +D  + +EKEGLSF+ETSALEATN+EKAFQTIL+EIY I+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 181 SLNSDEPATANIK---EGKTIVVGESEDNSKKACCSS 215
           +L + E ATA      +G TI V ++  N+KK CCS+
Sbjct: 181 ALAAQE-ATAGASVPGQGTTINVADTSGNTKKGCCST 216

[Close]

BLAST of CmoCh04G009600 vs. Swiss-Prot
Match: RAA2B_ARATH (Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2 SV=2)

HSP 1 Score: 326.6 bits (836), Expect = 2.0e-88
Identity = 164/214 (76.64%), Postives = 186/214 (86.92%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLSF+ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEDNSKKACCSS 215
           +L + E A     +G  I + +S   ++K CCS+
Sbjct: 181 ALAAQEAAGNLPGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of CmoCh04G009600 vs. TrEMBL
Match: A0A0A0L6P8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110590 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 1.7e-110
Identity = 210/216 (97.22%), Postives = 213/216 (98.61%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATA-NIKEGKTIVVGESEDNSKKACCSSS 216
           SLNS+EPA A NIKEGKTIVVGESE N+KKACCSSS
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of CmoCh04G009600 vs. TrEMBL
Match: A0A061DWD1_THECC (RAB GTPase 11C OS=Theobroma cacao GN=TCM_006132 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 5.1e-107
Identity = 200/215 (93.02%), Postives = 209/215 (97.21%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+IGNKTDLKHLRAVATED QSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MMIGNKTDLKHLRAVATEDGQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEDNSKKACCSSS 216
           SL+SDEPA A+IKEGKTI+VG  E N+KKACCSSS
Sbjct: 181 SLSSDEPAPASIKEGKTIIVGAQEANTKKACCSSS 215

[Close]

BLAST of CmoCh04G009600 vs. TrEMBL
Match: A0A059AU03_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02784 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 2.5e-106
Identity = 201/215 (93.49%), Postives = 209/215 (97.21%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARR +++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEDNSKKACCSSS 216
            L+S++ A ANIKEGKTIVVGESE N+KKACCSSS
Sbjct: 181 PLSSEDAAPANIKEGKTIVVGESEANTKKACCSSS 215

[Close]

BLAST of CmoCh04G009600 vs. TrEMBL
Match: B9SKB2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0757660 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 9.6e-106
Identity = 199/215 (92.56%), Postives = 207/215 (96.28%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ YAE+EGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEDNSKKACCSSS 216
           SL S+EPA ANIKEGK IVVG SE N+KK CCSSS
Sbjct: 181 SLTSEEPAPANIKEGKMIVVGGSEANTKKPCCSSS 215

[Close]

BLAST of CmoCh04G009600 vs. TrEMBL
Match: A0A067L1Z8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00259 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 6.2e-105
Identity = 198/215 (92.09%), Postives = 207/215 (96.28%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ YAE+EGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEDNSKKACCSSS 216
           SL+S+E A ANIKEGKTIVVG SE N K+ CCSSS
Sbjct: 181 SLSSEEQAPANIKEGKTIVVGGSEANVKRPCCSSS 215

[Close]

BLAST of CmoCh04G009600 vs. TAIR10
Match: AT1G09630.1 (AT1G09630.1 RAB GTPase 11C)

HSP 1 Score: 378.3 bits (970), Expect = 3.3e-105
Identity = 196/217 (90.32%), Postives = 206/217 (94.93%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSDE-PATANIKEGKTI-VVGESEDNSKKACCSSS 216
           S++SD+  A ANIKEG+TI V   SE N+KK CCSSS
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of CmoCh04G009600 vs. TAIR10
Match: AT3G46830.1 (AT3G46830.1 RAB GTPase homolog A2C)

HSP 1 Score: 331.3 bits (848), Expect = 4.6e-91
Identity = 168/217 (77.42%), Postives = 187/217 (86.18%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLSF+ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSDEPATANIK---EGKTIVVGESEDNSKKACCSS 215
           +L + E A AN     +G TI V ++   +K+ACCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of CmoCh04G009600 vs. TAIR10
Match: AT1G07410.1 (AT1G07410.1 RAB GTPase homolog A2B)

HSP 1 Score: 326.6 bits (836), Expect = 1.1e-89
Identity = 164/214 (76.64%), Postives = 186/214 (86.92%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLSF+ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEDNSKKACCSS 215
           +L + E A     +G  I + +S   ++K CCS+
Sbjct: 181 ALAAQEAAGNLPGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of CmoCh04G009600 vs. TAIR10
Match: AT5G59150.1 (AT5G59150.1 RAB GTPase homolog A2D)

HSP 1 Score: 325.9 bits (834), Expect = 1.9e-89
Identity = 165/217 (76.04%), Postives = 186/217 (85.71%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK DL HLR+VA ED Q+ AE EGLSF+ETSALEATNVEKAFQT+L+EIY IISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 SLNSDEPATANIK---EGKTIVVGESEDNSKKACCSS 215
           +L + E A AN     +G TI V ++    K+ CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSGAGKRGCCST 217

[Close]

BLAST of CmoCh04G009600 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F)

HSP 1 Score: 299.7 bits (766), Expect = 1.5e-81
Identity = 152/217 (70.05%), Postives = 184/217 (84.79%), Query Frame = 1


Query: 2   ARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
           A R DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V+ + V
Sbjct: 3   AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIV 62

Query: 62  KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVIM 121
           KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +TF+NV RWLKELRDH D+NIVIM
Sbjct: 63  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122

Query: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKS 181
            +GNK DL+HLRAV+TEDA+++AE+E   F+ETSALE+ NVE AF  +LS+IYR++S+K+
Sbjct: 123 FVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKA 182

Query: 182 LN-SDEPATANIKEGKTIVVGESEDNS---KKACCSS 215
           L+  D+PA   + +G+TI VG  +D S   K  CCS+
Sbjct: 183 LDIGDDPAA--LPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of CmoCh04G009600 vs. NCBI nr
Match: gi|449431866|ref|XP_004133721.1| (PREDICTED: ras-related protein RABA2a [Cucumis sativus])

HSP 1 Score: 406.8 bits (1044), Expect = 2.4e-110
Identity = 210/216 (97.22%), Postives = 213/216 (98.61%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATA-NIKEGKTIVVGESEDNSKKACCSSS 216
           SLNS+EPA A NIKEGKTIVVGESE N+KKACCSSS
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of CmoCh04G009600 vs. NCBI nr
Match: gi|659102651|ref|XP_008452243.1| (PREDICTED: ras-related protein RABA2a [Cucumis melo])

HSP 1 Score: 405.6 bits (1041), Expect = 5.4e-110
Identity = 209/216 (96.76%), Postives = 213/216 (98.61%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATA-NIKEGKTIVVGESEDNSKKACCSSS 216
           SLNS+EP+ A NIKEGKTIVVGESE N+KKACCSSS
Sbjct: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of CmoCh04G009600 vs. NCBI nr
Match: gi|590681777|ref|XP_007041174.1| (RAB GTPase 11C [Theobroma cacao])

HSP 1 Score: 395.2 bits (1014), Expect = 7.3e-107
Identity = 200/215 (93.02%), Postives = 209/215 (97.21%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+IGNKTDLKHLRAVATED QSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MMIGNKTDLKHLRAVATEDGQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEDNSKKACCSSS 216
           SL+SDEPA A+IKEGKTI+VG  E N+KKACCSSS
Sbjct: 181 SLSSDEPAPASIKEGKTIIVGAQEANTKKACCSSS 215

[Close]

BLAST of CmoCh04G009600 vs. NCBI nr
Match: gi|702469289|ref|XP_010030204.1| (PREDICTED: ras-related protein RABA2a [Eucalyptus grandis])

HSP 1 Score: 392.9 bits (1008), Expect = 3.6e-106
Identity = 201/215 (93.49%), Postives = 209/215 (97.21%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARR +++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEDNSKKACCSSS 216
            L+S++ A ANIKEGKTIVVGESE N+KKACCSSS
Sbjct: 181 PLSSEDAAPANIKEGKTIVVGESEANTKKACCSSS 215

[Close]

BLAST of CmoCh04G009600 vs. NCBI nr
Match: gi|747080785|ref|XP_011087655.1| (PREDICTED: ras-related protein RABA2a-like [Sesamum indicum])

HSP 1 Score: 391.3 bits (1004), Expect = 1.1e-105
Identity = 197/215 (91.63%), Postives = 207/215 (96.28%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD+DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TFDNV+RWLKELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ +AEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEDNSKKACCSSS 216
           SL SDEPA  +IKEGKT+VVG  ++N+KK CCS+S
Sbjct: 181 SLASDEPAPTSIKEGKTLVVGPQDNNTKKTCCSTS 215

The following BLAST results are available for this feature:

BLAST of CmoCh04G009600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA2A_ARATH	5.8e-104	90.32	Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1	[more]
RAA2C_ARATH	8.1e-90	77.42	Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4	[more]
RB2BV_BETVU	8.1e-90	76.64	Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1	[more]
RB11C_LOTJA	2.0e-88	76.04	Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1	[more]
RAA2B_ARATH	2.0e-88	76.64	Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2 SV=2	[more]

BLAST of CmoCh04G009600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6P8_CUCSA	1.7e-110	97.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110590 PE=4 SV=1	[more]
A0A061DWD1_THECC	5.1e-107	93.02	RAB GTPase 11C OS=Theobroma cacao GN=TCM_006132 PE=4 SV=1	[more]
A0A059AU03_EUCGR	2.5e-106	93.49	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02784 PE=4 SV=1	[more]
B9SKB2_RICCO	9.6e-106	92.56	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0757660 PE=4 SV=1	[more]
A0A067L1Z8_JATCU	6.2e-105	92.09	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00259 PE=4 SV=1	[more]

BLAST of CmoCh04G009600 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09630.1	3.3e-105	90.32	RAB GTPase 11C	[more]
AT3G46830.1	4.6e-91	77.42	RAB GTPase homolog A2C	[more]
AT1G07410.1	1.1e-89	76.64	RAB GTPase homolog A2B	[more]
AT5G59150.1	1.9e-89	76.04	RAB GTPase homolog A2D	[more]
AT5G60860.1	1.5e-81	70.05	RAB GTPase homolog A1F	[more]

BLAST of CmoCh04G009600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449431866\|ref\|XP_004133721.1\|	2.4e-110	97.22	PREDICTED: ras-related protein RABA2a [Cucumis sativus]	[more]
gi\|659102651\|ref\|XP_008452243.1\|	5.4e-110	96.76	PREDICTED: ras-related protein RABA2a [Cucumis melo]	[more]
gi\|590681777\|ref\|XP_007041174.1\|	7.3e-107	93.02	RAB GTPase 11C [Theobroma cacao]	[more]
gi\|702469289\|ref\|XP_010030204.1\|	3.6e-106	93.49	PREDICTED: ras-related protein RABA2a [Eucalyptus grandis]	[more]
gi\|747080785\|ref\|XP_011087655.1\|	1.1e-105	91.63	PREDICTED: ras-related protein RABA2a-like [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0019932	second-messenger-mediated signaling
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0009504	cell plate
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005768	endosome
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G009600.1	CmoCh04G009600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 14..174 score: 1.0
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 11..170 score: 4.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 5..212 score: 1.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..181 score: 2.81
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 116..129 score: 1.2E-42coord: 13..34 score: 1.2E-42coord: 151..173 score: 1.2E-42coord: 54..76 score: 1.2E-42coord: 36..52 score: 1.2
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 4..214 score: 1.2E
None	No IPR available	PANTHER	PTHR24073:SF484	RAS-RELATED PROTEIN RABA2B	coord: 4..214 score: 1.2E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 score: 5.4
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 15..172 score: 7.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 score: 6.8E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..211 score: 1.
None	No IPR available	PROFILE	PS51419	RAB	coord: 8..212 score: 36

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G009600	Cucsa.114210	Cucumber (Gy14) v1	cgycmoB0273
CmoCh04G009600	CmaCh16G007690	Cucurbita maxima (Rimu)	cmacmoB337
CmoCh04G009600	CmaCh04G008940	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G009600	Cla011813	Watermelon (97103) v1	cmowmB674
CmoCh04G009600	Csa3G110590	Cucumber (Chinese Long) v2	cmocuB693
CmoCh04G009600	MELO3C016491	Melon (DHL92) v3.5.1	cmomeB680
CmoCh04G009600	ClCG10G007150	Watermelon (Charleston Gray)	cmowcgB615
CmoCh04G009600	CSPI03G06360	Wild cucumber (PI 183967)	cmocpiB703
CmoCh04G009600	Cp4.1LG14g00470	Cucurbita pepo (Zucchini)	cmocpeB667
CmoCh04G009600	Cp4.1LG01g08520	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G009600	MELO3C016491.2	Melon (DHL92) v3.6.1	cmomedB775
CmoCh04G009600	CsaV3_3G006490	Cucumber (Chinese Long) v3	cmocucB0822
CmoCh04G009600	CsGy3G006470	Cucumber (Gy14) v2	cgybcmoB393
CmoCh04G009600	Carg25384	Silver-seed gourd	carcmoB0763
CmoCh04G009600	Carg00011	Silver-seed gourd	carcmoB0923

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G009600	CmoCh16G008320	Cucurbita moschata (Rifu)	cmocmoB285

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G009600	Wax gourd	cmowgoB0819
CmoCh04G009600	Bottle gourd (USVL1VR-Ls)	cmolsiB680
CmoCh04G009600	Watermelon (97103) v2	cmowmbB689