Carg25384 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25384
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ras-related protein like
Location	Cucurbita_argyrosperma_scaffold_283 : 135484 .. 137438 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAGGAGACCCGACGACGACTATGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCTGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGCTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTATCTCTCACTCTTAATTTCTCTCTCATTGGATATTTATATATGCCTCCGCTGTGTGTTCGCATGCTTTGCATTCTCGATCTGTTTGTAAATCTGCATTTGGATTTATTCTGGAACTCGAACTTTCTTGAAAGTTGTTATTCAAGGAATGATCTGATTTCTTTCTCGCTTGAAACAGTCGTTTTTTCAAAATCTGAATTGAGTTTGTGCATCTTCTCTTGCGGATCTGTGTTCTTGATTCGTTGTTCTTCTTGTATTTTCATTTTAACTTAGAGGAATGCGGGAAGTTATTAGTCTCTTTACTGATCTGGATTTCGATGATGAATTGAGAAAAATGCCTGATTAGGTATAACGTTTGATGGAAATTATTCAAATTCTGATCTGTGGATCGGTAAGAGATTCTATCCTAACTGTTAACGGAGATATATCTGAATATCATAATTGATTGTTTTGATGCCATTTAATTCAGTCCATAGAACCTTAATGCCATTCTTTAAAAATAAGAATCTGGAAAATGCAATTATTATTCAGATTTTGTTTTATGTATTCCACCCTTCTTCCATTCCTTCCTTTCCTTTTTTATTACGCAAACTTGACACCTTCAAACAATTTGATAGCAATTCTAAAGAGGAAATGCATTTCATCAAGTACTTAACAAAGTGGAGAAACATTTACAATTCTAGCCGCTCGCTGCAGCTTTTGATTTACACTGCATTATGTGGTCGTTTAAATCTCAGTTTCTTGGACTATAGTTGATACCTGGATAATGTTCTTTAGTTAGTGATCTTGTCACGCACATAAACACACTTTTTGATGATAGATTTTGGAGCTTCTTGGGTCGTCTATGTGATATTAGTGGCACATTTGTTGAACTAATCGTTGCCATAATCTGGATCTCTGCAGAATGATGGAACTTTTGTGATATCTGTAGTTCTTGTCCTGCTAAAGATTTCGAATTCATTTTTGTTTGTCTTGTAAGCTGAGTTAATATCGAACGCGGTGGTGACTCCTTGCTAGATGACTGAAACTGTTCGGTTTTTCGGAGCCCTTTTCCCTTTTACCCTCTCAAACTAAAATTACAGGCACATGGTTTCCAATTTTATTTTCTGATTCTTGAATATGAAGTTAATCTTTGCTTTATAAAATCAACAAAACGTTTTGGATATACAAACAGGACATCTTTTGATCATTTGTTTTATATGACATTTTAGCCTTAAGGTGGGTTTTAAGGGATCCATTCTTTTGATTGTGCTCTGATTATGAAAGTTATCAAGAAAAGAACTGTTCTGCTTTTTGATCAGGTTGAGGGAAGAACTGTGAAAGCCCAGATATGGGACACAGCTGGTCAAGAGCGATACAGAGCGATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCTCTTCTTGTGTACGACGTAACAAAACCGATGACATTCGATAACGTAAGTCGTTGGTTGAAGGAACTCAGAGACCATGCAGATTCCAACATAGTCATCATGTTAATTGGGAACAAGACTGATCTGAAACACCTCCGAGCGGTGGCAACGGAGGACGCTCAAAGCTATGCCGAGAAAGAAGGGCTGTCGTTCATCGAAACATCTGCTCTTGAAGCAACAAATGTGGAGAAGGCTTTCCAAACAATTCTCTCAGAGATATACCGGATAATCAGCAAGAAGTCCCTCAATTCAGAGGAGCCTGCTGCTGCTGCTGCTAACATCAAAGAAGGTAAAACCATTGTGGTTGGTGAATCTGAGGCCAATTCAAAGAAGCCTTGTTGCTCATCTTCTTAA

mRNA sequence

ATGGCCAGGAGACCCGACGACGACTATGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCTGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGCTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACTGTGAAAGCCCAGATATGGGACACAGCTGGTCAAGAGCGATACAGAGCGATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCTCTTCTTGTGTACGACGTAACAAAACCGATGACATTCGATAACGTAAGTCGTTGGTTGAAGGAACTCAGAGACCATGCAGATTCCAACATAGTCATCATGTTAATTGGGAACAAGACTGATCTGAAACACCTCCGAGCGGTGGCAACGGAGGACGCTCAAAGCTATGCCGAGAAAGAAGGGCTGTCGTTCATCGAAACATCTGCTCTTGAAGCAACAAATGTGGAGAAGGCTTTCCAAACAATTCTCTCAGAGATATACCGGATAATCAGCAAGAAGTCCCTCAATTCAGAGGAGCCTGCTGCTGCTGCTGCTAACATCAAAGAAGGTAAAACCATTGTGGTTGGTGAATCTGAGGCCAATTCAAAGAAGCCTTGTTGCTCATCTTCTTAA

Coding sequence (CDS)

ATGGCCAGGAGACCCGACGACGACTATGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCTGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGCTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACTGTGAAAGCCCAGATATGGGACACAGCTGGTCAAGAGCGATACAGAGCGATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCTCTTCTTGTGTACGACGTAACAAAACCGATGACATTCGATAACGTAAGTCGTTGGTTGAAGGAACTCAGAGACCATGCAGATTCCAACATAGTCATCATGTTAATTGGGAACAAGACTGATCTGAAACACCTCCGAGCGGTGGCAACGGAGGACGCTCAAAGCTATGCCGAGAAAGAAGGGCTGTCGTTCATCGAAACATCTGCTCTTGAAGCAACAAATGTGGAGAAGGCTTTCCAAACAATTCTCTCAGAGATATACCGGATAATCAGCAAGAAGTCCCTCAATTCAGAGGAGCCTGCTGCTGCTGCTGCTAACATCAAAGAAGGTAAAACCATTGTGGTTGGTGAATCTGAGGCCAATTCAAAGAAGCCTTGTTGCTCATCTTCTTAA

Protein sequence

MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS

Homology

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BLAST of Carg25384 vs. NCBI nr
Match: XP_022929370.1 (ras-related protein RABA2a [Cucurbita moschata] >XP_023552907.1 ras-related protein RABA2a [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.2 bits (1084), Expect = 1.1e-114
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS
Sbjct: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 217

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BLAST of Carg25384 vs. NCBI nr
Match: XP_022984392.1 (ras-related protein RABA2a [Cucurbita maxima])

HSP 1 Score: 420.2 bits (1079), Expect = 4.2e-114
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SLNSEEPAAAAANIKEGK IVVGESEANSKKPCCSSS
Sbjct: 181 SLNSEEPAAAAANIKEGKAIVVGESEANSKKPCCSSS 217

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BLAST of Carg25384 vs. NCBI nr
Match: XP_004133721.1 (PREDICTED: ras-related protein RABA2a [Cucumis sativus] >KGN56262.1 hypothetical protein Csa_3G110590 [Cucumis sativus])

HSP 1 Score: 409.5 bits (1051), Expect = 7.3e-111
Identity = 213/217 (98.16%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SLNSEEP AAA NIKEGKTIVVGESEAN+KK CCSSS
Sbjct: 181 SLNSEEP-AAANNIKEGKTIVVGESEANTKKACCSSS 216

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BLAST of Carg25384 vs. NCBI nr
Match: XP_008452243.1 (PREDICTED: ras-related protein RABA2a [Cucumis melo] >XP_008452244.1 PREDICTED: ras-related protein RABA2a [Cucumis melo])

HSP 1 Score: 408.3 bits (1048), Expect = 1.6e-110
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SLNSEEP +AA NIKEGKTIVVGESEAN+KK CCSSS
Sbjct: 181 SLNSEEP-SAANNIKEGKTIVVGESEANTKKACCSSS 216

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BLAST of Carg25384 vs. NCBI nr
Match: XP_022989944.1 (ras-related protein RABA2a-like [Cucurbita maxima])

HSP 1 Score: 406.8 bits (1044), Expect = 4.8e-110
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSY+EKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYSEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SLNS+EP  AAANIKEGKTIVVGESEANSKK CCSSS
Sbjct: 181 SLNSDEP--AAANIKEGKTIVVGESEANSKKACCSSS 215

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BLAST of Carg25384 vs. TAIR10
Match: AT1G09630.1 (RAB GTPase 11C)

HSP 1 Score: 380.2 bits (975), Expect = 8.7e-106
Identity = 197/218 (90.37%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTI-VVGESEANSKKPCCSSS 218
           S++S++   A ANIKEG+TI V   SE+N+KKPCCSSS
Sbjct: 181 SISSDQ-TTANANIKEGQTIDVAATSESNAKKPCCSSS 217

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BLAST of Carg25384 vs. TAIR10
Match: AT5G59150.1 (RAB GTPase homolog A2D)

HSP 1 Score: 327.0 bits (837), Expect = 8.7e-90
Identity = 166/217 (76.50%), Postives = 189/217 (87.10%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK DL HLR+VA ED Q+ AE EGLSF+ETSALEATNVEKAFQT+L+EIY IISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 SLNSEEPAAAAANIK-EGKTIVVGESEANSKKPCCSS 217
           +L ++E AAA + I  +G TI V ++    K+ CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSGAGKRGCCST 217

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BLAST of Carg25384 vs. TAIR10
Match: AT3G46830.1 (RAB GTPase homolog A2C)

HSP 1 Score: 313.2 bits (801), Expect = 1.3e-85
Identity = 160/217 (73.73%), Postives = 181/217 (83.41%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS         +ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLXXXXXXXXLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSEEPAAAAANIK-EGKTIVVGESEANSKKPCCSS 217
           +L ++E AAA + I  +G TI V ++   +K+ CCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

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BLAST of Carg25384 vs. TAIR10
Match: AT1G07410.1 (RAB GTPase homolog A2B)

HSP 1 Score: 308.5 bits (789), Expect = 3.2e-84
Identity = 159/217 (73.27%), Postives = 182/217 (83.87%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S          ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSXXXXXXXXXXETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSEEPAAAAANIK-EGKTIVVGESEANSKKPCCSS 217
           +L ++E   AA N+  +G  I + +S A ++K CCS+
Sbjct: 181 ALAAQE---AAGNLPGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of Carg25384 vs. TAIR10
Match: AT5G60860.1 (RAB GTPase homolog A1F)

HSP 1 Score: 295.4 bits (755), Expect = 2.8e-80
Identity = 151/219 (68.95%), Postives = 184/219 (84.02%), Query Frame = 0


Query: 2   ARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
           A R DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V+ + V
Sbjct: 3   AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIV 62

Query: 62  KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIM 121
           KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +TF+NV RWLKELRDH D+NIVIM
Sbjct: 63  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122

Query: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKS 181
            +GNK DL+HLRAV+TEDA+++AE+E   F+ETSALE+ NVE AF  +LS+IYR++S+K+
Sbjct: 123 FVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKA 182

Query: 182 LN-SEEPAAAAANIKEGKTIVVGESE---ANSKKPCCSS 217
           L+  ++PAA    + +G+TI VG  +   A  K  CCS+
Sbjct: 183 LDIGDDPAA----LPKGQTINVGSKDDVSAVKKVGCCSN 217

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BLAST of Carg25384 vs. Swiss-Prot
Match: sp|O04486|RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana OX=3702 GN=RABA2A PE=2 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.6e-104
Identity = 197/218 (90.37%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTI-VVGESEANSKKPCCSSS 218
           S++S++   A ANIKEG+TI V   SE+N+KKPCCSSS
Sbjct: 181 SISSDQ-TTANANIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of Carg25384 vs. Swiss-Prot
Match: sp|Q40193|RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 6.4e-90
Identity = 164/216 (75.93%), Postives = 190/216 (87.96%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLRAV+ +D  + +EKEGLSF+ETSALEATN+EKAFQTIL+EIY I+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSS 217
           +L ++E  A A+   +G TI V ++  N+KK CCS+
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGNTKKGCCST 216

[Close]

BLAST of Carg25384 vs. Swiss-Prot
Match: sp|Q39434|RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 8.3e-90
Identity = 167/217 (76.96%), Postives = 193/217 (88.94%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DLKHLRAV+ ED Q+ AEKEGLSF+ETSALEA N+EKAFQTIL+EIY IISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 SLNSEEPAAAAANIK-EGKTIVVGESEANSKKPCCSS 217
           +L ++E   A++N+  +G TI V ++ AN ++ CCS+
Sbjct: 181 ALAAQE---ASSNLPGQGTTINVADASANQRRSCCST 214

[Close]

BLAST of Carg25384 vs. Swiss-Prot
Match: sp|Q9FIF9|RAA2D_ARATH (Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.6e-88
Identity = 166/217 (76.50%), Postives = 189/217 (87.10%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK DL HLR+VA ED Q+ AE EGLSF+ETSALEATNVEKAFQT+L+EIY IISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 SLNSEEPAAAAANIK-EGKTIVVGESEANSKKPCCSS 217
           +L ++E AAA + I  +G TI V ++    K+ CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSGAGKRGCCST 217

[Close]

BLAST of Carg25384 vs. Swiss-Prot
Match: sp|Q40523|RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 6.0e-88
Identity = 163/216 (75.46%), Postives = 189/216 (87.50%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALL YD+TK  TFDNV RWL+ELRDH DSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           +L GNK+DLKHLRAV+ +D Q+  +KEGLSF+ETSALEA NV+KAFQTIL++IY IISKK
Sbjct: 121 ILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSS 217
           +L ++E AA+ A   +G TI V ++ AN K+ CCS+
Sbjct: 181 ALAAQEAAASTALPGQGTTINVSDNSANVKRGCCST 216

[Close]

BLAST of Carg25384 vs. TrEMBL
Match: tr|A0A0A0L6P8|A0A0A0L6P8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110590 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 4.9e-111
Identity = 213/217 (98.16%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SLNSEEP AAA NIKEGKTIVVGESEAN+KK CCSSS
Sbjct: 181 SLNSEEP-AAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Carg25384 vs. TrEMBL
Match: tr|A0A1S3BTD1|A0A1S3BTD1_CUCME (ras-related protein RABA2a OS=Cucumis melo OX=3656 GN=LOC103493317 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.1e-110
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SLNSEEP +AA NIKEGKTIVVGESEAN+KK CCSSS
Sbjct: 181 SLNSEEP-SAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Carg25384 vs. TrEMBL
Match: tr|A0A2C9V5L6|A0A2C9V5L6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G115900 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.6e-106
Identity = 203/217 (93.55%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAE+EGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SL+SEEP    ANIKEGKTIVVG SE N+KKPCCSSS
Sbjct: 181 SLSSEEP--TPANIKEGKTIVVGGSEGNAKKPCCSSS 215

[Close]

BLAST of Carg25384 vs. TrEMBL
Match: tr|B9SKB2|B9SKB2_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0757660 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 3.6e-106
Identity = 203/217 (93.55%), Postives = 209/217 (96.31%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ YAE+EGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SL SEEP  A ANIKEGK IVVG SEAN+KKPCCSSS
Sbjct: 181 SLTSEEP--APANIKEGKMIVVGGSEANTKKPCCSSS 215

[Close]

BLAST of Carg25384 vs. TrEMBL
Match: tr|A0A059AU03|A0A059AU03_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I02784 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.0e-105
Identity = 204/217 (94.01%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARR +++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
            L+SE+  AA ANIKEGKTIVVGESEAN+KK CCSSS
Sbjct: 181 PLSSED--AAPANIKEGKTIVVGESEANTKKACCSSS 215

The following BLAST results are available for this feature:

BLAST of Carg25384 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929370.1	1.1e-114	100.00	ras-related protein RABA2a [Cucurbita moschata] >XP_023552907.1 ras-related prot...	[more]
XP_022984392.1	4.2e-114	99.54	ras-related protein RABA2a [Cucurbita maxima]	[more]
XP_004133721.1	7.3e-111	98.16	PREDICTED: ras-related protein RABA2a [Cucumis sativus] >KGN56262.1 hypothetical...	[more]
XP_008452243.1	1.6e-110	97.70	PREDICTED: ras-related protein RABA2a [Cucumis melo] >XP_008452244.1 PREDICTED: ...	[more]
XP_022989944.1	4.8e-110	96.77	ras-related protein RABA2a-like [Cucurbita maxima]	[more]

BLAST of Carg25384 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09630.1	8.7e-106	90.37	RAB GTPase 11C	[more]
AT5G59150.1	8.7e-90	76.50	RAB GTPase homolog A2D	[more]
AT3G46830.1	1.3e-85	73.73	RAB GTPase homolog A2C	[more]
AT1G07410.1	3.2e-84	73.27	RAB GTPase homolog A2B	[more]
AT5G60860.1	2.8e-80	68.95	RAB GTPase homolog A1F	[more]

BLAST of Carg25384 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04486\|RAA2A_ARATH	1.6e-104	90.37	Ras-related protein RABA2a OS=Arabidopsis thaliana OX=3702 GN=RABA2A PE=2 SV=1	[more]
sp\|Q40193\|RB11C_LOTJA	6.4e-90	75.93	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
sp\|Q39434\|RB2BV_BETVU	8.3e-90	76.96	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
sp\|Q9FIF9\|RAA2D_ARATH	1.6e-88	76.50	Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1	[more]
sp\|Q40523\|RB11A_TOBAC	6.0e-88	75.46	Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1	[more]

BLAST of Carg25384 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6P8\|A0A0A0L6P8_CUCSA	4.9e-111	98.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110590 PE=4 SV=1	[more]
tr\|A0A1S3BTD1\|A0A1S3BTD1_CUCME	1.1e-110	97.70	ras-related protein RABA2a OS=Cucumis melo OX=3656 GN=LOC103493317 PE=4 SV=1	[more]
tr\|A0A2C9V5L6\|A0A2C9V5L6_MANES	1.6e-106	93.55	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G115900 PE=4 SV=...	[more]
tr\|B9SKB2\|B9SKB2_RICCO	3.6e-106	93.55	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0757660 PE=4 SV=1	[more]
tr\|A0A059AU03\|A0A059AU03_EUCGR	1.0e-105	94.01	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I02784 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25384-RA	Carg25384-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 116..129 score: 50.58 coord: 54..76 score: 52.08 coord: 151..173 score: 43.68 coord: 13..34 score: 55.2 coord: 36..52 score: 36.23
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 e-value: 5.6E-27 score: 105.6
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 15..172 e-value: 7.2E-12 score: 32.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 e-value: 2.7E-112 score: 389.0
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..213 e-value: 3.4E-7 score: 39.9
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 6..214 e-value: 1.1E-69 score: 235.8
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..215
None	No IPR available	PANTHER	PTHR24073:SF613	RAS-RELATED PROTEIN RABA2A	coord: 1..215
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..214 score: 36.536
None	No IPR available	CDD	cd01868	Rab11_like	coord: 10..174 e-value: 1.63179E-128 score: 361.492
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 14..174 e-value: 1.2E-61 score: 206.9
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..170 e-value: 9.3E-41 score: 137.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..182

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25384	Cla011813	Watermelon (97103) v1	carwmB0558
Carg25384	Csa3G110590	Cucumber (Chinese Long) v2	carcuB0589
Carg25384	MELO3C016491	Melon (DHL92) v3.5.1	carmeB0565
Carg25384	ClCG10G007150	Watermelon (Charleston Gray)	carwcgB0546
Carg25384	CSPI03G06360	Wild cucumber (PI 183967)	carcpiB0595
Carg25384	Cucsa.114210	Cucumber (Gy14) v1	carcgyB0638
Carg25384	CmaCh04G008940	Cucurbita maxima (Rimu)	carcmaB0783
Carg25384	CmaCh16G007690	Cucurbita maxima (Rimu)	carcmaB0782
Carg25384	CmoCh16G008320	Cucurbita moschata (Rifu)	carcmoB0762
Carg25384	CmoCh04G009600	Cucurbita moschata (Rifu)	carcmoB0763
Carg25384	Cp4.1LG01g08520	Cucurbita pepo (Zucchini)	carcpeB0797
Carg25384	Cp4.1LG14g00470	Cucurbita pepo (Zucchini)	carcpeB0796
Carg25384	CsGy3G006470	Cucumber (Gy14) v2	carcgybB0565
Carg25384	MELO3C016491.2	Melon (DHL92) v3.6.1	carmedB0571
Carg25384	CsaV3_3G006490	Cucumber (Chinese Long) v3	carcucB0597

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25384	Carg00011	Silver-seed gourd	carcarB519

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25384	Watermelon (97103) v2	carwmbB0585
Carg25384	Wax gourd	carwgoB0669
Carg25384	Bottle gourd (USVL1VR-Ls)	carlsiB508
Carg25384	Bottle gourd (USVL1VR-Ls)	carlsiB509