ClCG10G007150 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGGACAAAAATAAGAGGATGTTTTGGCAAATTAAGTTGGATTGAGTTGGCGGTTGGTCGAAAATGCCCATATCTACAAGGGCAGTTTCGGCCATACCTTTGATTTGAAGTCGGCGGAGTCTCCATTTCGTCTTCATATTCAAAGTGGAGCCGACCAGCCGATTCGTGACGAACAACAAAACAAGTTCTTCAGTTTTTGCTTTCCAGATTTGGGAAACCTAAATCTGTAGAACAAAGAACGAAGAACAAGAGAAGGTGAGAGTAAATACCCGCGAAATATGGCTCGGAGACCCGACGATGACTATGATTACCTCTTCAAAGTTGTGCTAATCGGCGACTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTATCTCTCTCTCTCTTCATTTCTCTCTCTCATTGTCATTGGGTATTTATATCTGCTTGTGCATTCTCGATCTGTATGTAAATCTGCATTTGGATTGATTTTGGAACTCGAGTTCATAATTTATTTGTTGTAATTCAAGAATGATCTGTTTTCCTTTTCGTTCAAAACAGATTTTCTTCTTCTTTTTAAATATCTGAATTGAGTTTGTGGATCTTCTCTGGCGGATCTGTGTTCCCAATTGGTTGTTCTGGTTGTGTTTTCATATTAATTTAGAGGAATGCAAGAAGTTATTCGTATCTTTAGTGATCTGGATTTGGATGATGAATCGAGAAAAATGCCTGTAAATTTGATTAGGTATAACTTTTGATGGAAATTATCCGGATTCTGATCCGGGTATGGATAAGAGATTTCATCCTAACTTTTTAATGGATATATATCTATAGATCATAATTGGTTGTTTTGATGCCATTTAATTTACTCCTCAGAATACGAATCTGAATTAATGACTCCTTTCCTGGAAATGCATTTATTATCTTAGTTTTATTCAGAATTTGATTATGTATCCCATCTTTCTTCCATTCCTTCATTTCCATTTTGATTATGCAAATTTTACACTTTTAAACAATTCAAGAGCAATTCTAAAGAGGACGAGCATTTTACAAATAGTTAGAAAAAATGAAGAAACATTTACAAATCTAGCCGCAATCCTTGATTTACACTGCAATATGTGGCCGTTTAAATCTCAGTTTCTTGGTCTATGGTTGATACCTGGAAATTGTTATTTAGTTAGTATACTCTCACACATATACACGTTTTGATAATAGATTTTGGAATTTTGGATTGTCTTATGTCTTCAAACGGCTATGTAATATTAGTTGCACATTTGTTGAACTAAACTTTGCCATAATCTGGATCTCTGCAGAATGAGGGAAACTTGTGTGATATATGTTGTTGTTGTCCTGCTAGAGATTTCGATTTTCATTTTCGTTTGACTCGTAATCTGAGTTAATGTGGAAAGCGGTGGCAACTCCTTGCTAGATGACTGACACTGTTTAGTTTCTCAGAGATCGGTTTAAGAAATTTGATTTATGACCTTTTCTTTTTGGTCCTCTCTTAGACCAAAACTACCGGCACGGAGTAACAGATCCATAGTTTCCAATTCTGTTTTCTGATTCTCGCCTATGAAGTTAGTCTTTGCTTTATAAAATCAACAGAACGTTTTGGATATACAAACAGAACGGCTTTTGATCATTTGTTTATTGTTTATATGACATTTTAGCCTTGGTTCATTGATGAAGGGATCTATATTATTTATTGTGCTTTGATTATCAAAGTTATCAAGAAAAAGAAATGCTGCATATTTTATTAGGTTGAGGGAAGAACTGTTAAAGCTCAGATATGGGACACGGCTGGTCAAGAGCGTTACAGAGCGATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCCCTTCTAGTGTACGATGTAACGAAACCAATGACATTCGATAACGTAAGCCGTTGGTTGAAGGAACTTAGGGACCATGCCGATTCCAACATAGTCATCATGTTGATCGGTAACAAGACTGATCTGAAACACCTCCGAGCAGTGGCAACAGAGGACGCTCAAAGCTATGCCGAGAAAGAAGGACTATCCTTCATAGAAACTTCTGCTCTTGAAGCAACAAATGTGGAGAAGGCTTTCCAAACTATTCTCTCAGAGATATATCGGATCATCAGTAAAAAGTCCCTCAATTCAGAGGAGCCTGCTGCCGCAAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCGGAGGCCAATACAAAGAAGGCTTGTTGTTCCTCTTCTTAAGTTCACAAAATATATTTCAACAATTTTTGTAACTCTCTCTCTCTCTCTCTCTC GAAGGACAAAAATAAGAGGATGTTTTGGCAAATTAAGTTGGATTGAGTTGGCGGTTGGTCGAAAATGCCCATATCTACAAGGGCAGTTTCGGCCATACCTTTGATTTGAAGTCGGCGGAGTCTCCATTTCGTCTTCATATTCAAAGTGGAGCCGACCAGCCGATTCGTGACGAACAACAAAACAAGTTCTTCAGTTTTTGCTTTCCAGATTTGGGAAACCTAAATCTGTAGAACAAAGAACGAAGAACAAGAGAAGGTGAGAGTAAATACCCGCGAAATATGGCTCGGAGACCCGACGATGACTATGATTACCTCTTCAAAGTTGTGCTAATCGGCGACTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACTGTTAAAGCTCAGATATGGGACACGGCTGGTCAAGAGCGTTACAGAGCGATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCCCTTCTAGTGTACGATGTAACGAAACCAATGACATTCGATAACGTAAGCCGTTGGTTGAAGGAACTTAGGGACCATGCCGATTCCAACATAGTCATCATGTTGATCGGTAACAAGACTGATCTGAAACACCTCCGAGCAGTGGCAACAGAGGACGCTCAAAGCTATGCCGAGAAAGAAGGACTATCCTTCATAGAAACTTCTGCTCTTGAAGCAACAAATGTGGAGAAGGCTTTCCAAACTATTCTCTCAGAGATATATCGGATCATCAGTAAAAAGTCCCTCAATTCAGAGGAGCCTGCTGCCGCAAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCGGAGGCCAATACAAAGAAGGCTTGTTGTTCCTCTTCTTAAGTTCACAAAATATATTTCAACAATTTTTGTAACTCTCTCTCTCTCTCTCTCTC ATGGCTCGGAGACCCGACGATGACTATGATTACCTCTTCAAAGTTGTGCTAATCGGCGACTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACTGTTAAAGCTCAGATATGGGACACGGCTGGTCAAGAGCGTTACAGAGCGATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCCCTTCTAGTGTACGATGTAACGAAACCAATGACATTCGATAACGTAAGCCGTTGGTTGAAGGAACTTAGGGACCATGCCGATTCCAACATAGTCATCATGTTGATCGGTAACAAGACTGATCTGAAACACCTCCGAGCAGTGGCAACAGAGGACGCTCAAAGCTATGCCGAGAAAGAAGGACTATCCTTCATAGAAACTTCTGCTCTTGAAGCAACAAATGTGGAGAAGGCTTTCCAAACTATTCTCTCAGAGATATATCGGATCATCAGTAAAAAGTCCCTCAATTCAGAGGAGCCTGCTGCCGCAAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCGGAGGCCAATACAAAGAAGGCTTGTTGTTCCTCTTCTTAA MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPAAANIKEGKTIVVGESEANTKKACCSSS
BLAST of ClCG10G007150 vs. Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 2.0e-104 Identity = 196/217 (90.32%), Postives = 204/217 (94.01%), Query Frame = 1
BLAST of ClCG10G007150 vs. Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 335.5 bits (859), Expect = 4.3e-91 Identity = 169/217 (77.88%), Postives = 187/217 (86.18%), Query Frame = 1
BLAST of ClCG10G007150 vs. Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 4.3e-91 Identity = 165/214 (77.10%), Postives = 189/214 (88.32%), Query Frame = 1
BLAST of ClCG10G007150 vs. Swiss-Prot
Match: RAA2B_ARATH (Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2 SV=2) HSP 1 Score: 332.0 bits (850), Expect = 4.8e-90 Identity = 165/214 (77.10%), Postives = 185/214 (86.45%), Query Frame = 1
BLAST of ClCG10G007150 vs. Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 1.1e-89 Identity = 165/216 (76.39%), Postives = 189/216 (87.50%), Query Frame = 1
BLAST of ClCG10G007150 vs. TrEMBL
Match: A0A0A0L6P8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110590 PE=4 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 2.1e-113 Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 1
BLAST of ClCG10G007150 vs. TrEMBL
Match: A0A059AU03_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02784 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 9.3e-109 Identity = 205/215 (95.35%), Postives = 210/215 (97.67%), Query Frame = 1
BLAST of ClCG10G007150 vs. TrEMBL
Match: A0A061DWD1_THECC (RAB GTPase 11C OS=Theobroma cacao GN=TCM_006132 PE=4 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 1.2e-108 Identity = 202/215 (93.95%), Postives = 210/215 (97.67%), Query Frame = 1
BLAST of ClCG10G007150 vs. TrEMBL
Match: B9SKB2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0757660 PE=4 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 3.5e-108 Identity = 203/215 (94.42%), Postives = 208/215 (96.74%), Query Frame = 1
BLAST of ClCG10G007150 vs. TrEMBL
Match: A0A067L1Z8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00259 PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 3.9e-107 Identity = 201/215 (93.49%), Postives = 208/215 (96.74%), Query Frame = 1
BLAST of ClCG10G007150 vs. TAIR10
Match: AT1G09630.1 (AT1G09630.1 RAB GTPase 11C) HSP 1 Score: 379.8 bits (974), Expect = 1.1e-105 Identity = 196/217 (90.32%), Postives = 204/217 (94.01%), Query Frame = 1
BLAST of ClCG10G007150 vs. TAIR10
Match: AT3G46830.1 (AT3G46830.1 RAB GTPase homolog A2C) HSP 1 Score: 335.5 bits (859), Expect = 2.4e-92 Identity = 169/217 (77.88%), Postives = 187/217 (86.18%), Query Frame = 1
BLAST of ClCG10G007150 vs. TAIR10
Match: AT1G07410.1 (AT1G07410.1 RAB GTPase homolog A2B) HSP 1 Score: 332.0 bits (850), Expect = 2.7e-91 Identity = 165/214 (77.10%), Postives = 185/214 (86.45%), Query Frame = 1
BLAST of ClCG10G007150 vs. TAIR10
Match: AT5G59150.1 (AT5G59150.1 RAB GTPase homolog A2D) HSP 1 Score: 329.7 bits (844), Expect = 1.3e-90 Identity = 166/217 (76.50%), Postives = 187/217 (86.18%), Query Frame = 1
BLAST of ClCG10G007150 vs. TAIR10
Match: AT1G16920.1 (AT1G16920.1 RAB GTPase homolog A1B) HSP 1 Score: 298.9 bits (764), Expect = 2.5e-81 Identity = 150/212 (70.75%), Postives = 176/212 (83.02%), Query Frame = 1
BLAST of ClCG10G007150 vs. NCBI nr
Match: gi|449431866|ref|XP_004133721.1| (PREDICTED: ras-related protein RABA2a [Cucumis sativus]) HSP 1 Score: 416.4 bits (1069), Expect = 3.1e-113 Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 1
BLAST of ClCG10G007150 vs. NCBI nr
Match: gi|659102651|ref|XP_008452243.1| (PREDICTED: ras-related protein RABA2a [Cucumis melo]) HSP 1 Score: 415.2 bits (1066), Expect = 6.8e-113 Identity = 214/216 (99.07%), Postives = 215/216 (99.54%), Query Frame = 1
BLAST of ClCG10G007150 vs. NCBI nr
Match: gi|702469289|ref|XP_010030204.1| (PREDICTED: ras-related protein RABA2a [Eucalyptus grandis]) HSP 1 Score: 401.0 bits (1029), Expect = 1.3e-108 Identity = 205/215 (95.35%), Postives = 210/215 (97.67%), Query Frame = 1
BLAST of ClCG10G007150 vs. NCBI nr
Match: gi|590681777|ref|XP_007041174.1| (RAB GTPase 11C [Theobroma cacao]) HSP 1 Score: 400.6 bits (1028), Expect = 1.7e-108 Identity = 202/215 (93.95%), Postives = 210/215 (97.67%), Query Frame = 1
BLAST of ClCG10G007150 vs. NCBI nr
Match: gi|255570960|ref|XP_002526431.1| (PREDICTED: ras-related protein RABA2a [Ricinus communis]) HSP 1 Score: 399.1 bits (1024), Expect = 5.1e-108 Identity = 203/215 (94.42%), Postives = 208/215 (96.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|