CmoCh16G008320 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G008320
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RAN GTPase 3
Location	Cmo_Chr16 : 4377847 .. 4380090 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCATATTCAAAGTGGAGCAGCCGATTCTTGAGGAACAGATTCTTCAATTTTGCTTTCCAGATTTGGGGAAGCTAAATCTGTGAGCCAAAGATCGAGGAACGAGAGAGAGAGAGAGGAAATACCGGCGAAATATGGCCAGGAGACCCGACGACGACTATGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCTGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGCTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTATCTCTCACTCTTAATTTCTCTCTCATTGGATATTTATATATGCCTCCGCTGTGTGTTCGCATGCTTTGCATTCTCGATCTGTTTGTAAATCTGCATTTGGATTTATTCTGGAACTCGAACTTTCTTGAAAGTTGTTATTCAAGGAATGATCTGATTTCTTTCTCGCTTGAAACAGTCGTTTTTTCAAAATCTGAATTGAGTTTGTGCATCTTCTCTTGCGGATCTGTGTTCTTGATTCGTTGTTCTTCTTGTATTTTCATTTTAACTTAGAGGAATGCGGGAAGTTATTAGTCTCTTTACTGATCTGGATTTCGATGATGAATTGAGAAAAATGCCTGATTAGGTATAACGTTTGATGGAAATTATTCAAATTCTGATCTGTGGATCGGTAAGAGATTCTATCCTAACTGTTAACGGAGATATATCTGAATATCATAATTGATTGTTTTGATGCCATTTAATTCAGTCCATAGAACCTTAATGCCATTCTTTAAAAATAAGAATCTGGAAAATGCAATTATTATTCAGATTTTGTTTTATGTATTCCACCCTTCTTCCATTCCTTCCTTTCCTTTTTTATTACGCAAACTTGACACCTTCAAACAATTTGATAGCAATTCTAAAGAGGAAATGCATTTCATCAAGTACTTAACAAAGTGGAGAAACATTTACAATTCTAGCCGCTCGCTGCAGCTTTTGATTTACACTGCATTATGTGGTCGTTTAAATCTCAGTTTCTTGGACTATAGTTGATACCTGGATAATGTTCTTTAGTTCGTGATCTTGTCACGCACATAAACACACTTTTTGATGATAGATTTTGGAGCTTCTTGGGTCGTCTATGTGATATTAGTGGCACATTTGTTGAACTAATCGTTGCCATAATCTGGATCTCTGCAGAATGATGGAACTTTTGTGATATCTGTAGTTCTTGTCCTGCTAAAGATTTCGAATTCATTTTTGTTTGTCTTGTAAGCTGAGTTAATATCGAACGCGGTGGTGACTCCTTGCTAGATGACTGAAACTGTTCGGTTTTTCGGAGCCCTTTTCCCTTTTACCCTCTCAAACTAAAATTACAGGCACATGGTTTCCAATTTTATTTTCTGATTCTTGAATATGAAGTTAATCTTTGCTTTATAAAATCAACAAAACGTTTTGGATATACAAACAGGACATCTTTTGATCATTTGTTTTATATGACATTTTAGCCTTAAGGTGGGTTTTAAGGGATCCATTCTTTTGATTGTGCTCTGATTATGAAAGTTATCAAGAAAAGAACTGTTCTGCTTTTTGATCAGGTTGAGGGAAGAACTGTGAAAGCCCAGATATGGGACACAGCTGGTCAAGAGCGATACAGAGCGATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCTCTTCTTGTGTACGACGTAACAAAACCGATGACATTCGATAACGTAAGTCGTTGGTTGAAGGAACTCAGAGACCATGCAGATTCCAACATAGTCATCATGTTAATTGGGAACAAGACTGATCTGAAACACCTCCGAGCGGTGGCAACGGAGGACGCTCAAAGCTATGCCGAGAAAGAAGGGCTGTCGTTCATCGAAACATCTGCTCTTGAAGCAACAAATGTGGAGAAGGCTTTCCAAACAATTCTCTCAGAGATATACCGGATAATCAGCAAGAAGTCCCTCAATTCAGAGGAGCCTGCTGCTGCTGCTGCTAACATCAAAGAAGGTAAAACCATTGTGGTTGGTGAATCTGAGGCCAATTCAAAGAAGCCTTGTTGCTCATCTTCTTAAGTTCACAAAATATTTCCACAATTTTTGGATCTCTCTCTCTATCTCTTCTTTGTTCATCTGCTCGTTGATTACTTTTTAGTTACCAACTCTGTTCTGTTTTTTGTTTGCTTGGATTTACATTGATATATAATTTACATATAATTCATATTTTACTTCA

mRNA sequence

TTCATATTCAAAGTGGAGCAGCCGATTCTTGAGGAACAGATTCTTCAATTTTGCTTTCCAGATTTGGGGAAGCTAAATCTGTGAGCCAAAGATCGAGGAACGAGAGAGAGAGAGAGGAAATACCGGCGAAATATGGCCAGGAGACCCGACGACGACTATGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCTGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGCTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACTGTGAAAGCCCAGATATGGGACACAGCTGGTCAAGAGCGATACAGAGCGATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCTCTTCTTGTGTACGACGTAACAAAACCGATGACATTCGATAACGTAAGTCGTTGGTTGAAGGAACTCAGAGACCATGCAGATTCCAACATAGTCATCATGTTAATTGGGAACAAGACTGATCTGAAACACCTCCGAGCGGTGGCAACGGAGGACGCTCAAAGCTATGCCGAGAAAGAAGGGCTGTCGTTCATCGAAACATCTGCTCTTGAAGCAACAAATGTGGAGAAGGCTTTCCAAACAATTCTCTCAGAGATATACCGGATAATCAGCAAGAAGTCCCTCAATTCAGAGGAGCCTGCTGCTGCTGCTGCTAACATCAAAGAAGGTAAAACCATTGTGGTTGGTGAATCTGAGGCCAATTCAAAGAAGCCTTGTTGCTCATCTTCTTAAGTTCACAAAATATTTCCACAATTTTTGGATCTCTCTCTCTATCTCTTCTTTGTTCATCTGCTCGTTGATTACTTTTTAGTTACCAACTCTGTTCTGTTTTTTGTTTGCTTGGATTTACATTGATATATAATTTACATATAATTCATATTTTACTTCA

Coding sequence (CDS)

ATGGCCAGGAGACCCGACGACGACTATGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCTGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGCTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACTGTGAAAGCCCAGATATGGGACACAGCTGGTCAAGAGCGATACAGAGCGATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCTCTTCTTGTGTACGACGTAACAAAACCGATGACATTCGATAACGTAAGTCGTTGGTTGAAGGAACTCAGAGACCATGCAGATTCCAACATAGTCATCATGTTAATTGGGAACAAGACTGATCTGAAACACCTCCGAGCGGTGGCAACGGAGGACGCTCAAAGCTATGCCGAGAAAGAAGGGCTGTCGTTCATCGAAACATCTGCTCTTGAAGCAACAAATGTGGAGAAGGCTTTCCAAACAATTCTCTCAGAGATATACCGGATAATCAGCAAGAAGTCCCTCAATTCAGAGGAGCCTGCTGCTGCTGCTGCTAACATCAAAGAAGGTAAAACCATTGTGGTTGGTGAATCTGAGGCCAATTCAAAGAAGCCTTGTTGCTCATCTTCTTAA

Homology

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BLAST of CmoCh16G008320 vs. Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.5e-104
Identity = 197/218 (90.37%), Postives = 208/218 (95.41%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTI-VVGESEANSKKPCCSSS 218
           S++S++   A ANIKEG+TI V   SE+N+KKPCCSSS
Sbjct: 181 SISSDQ-TTANANIKEGQTIDVAATSESNAKKPCCSSS 217

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BLAST of CmoCh16G008320 vs. Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 6.3e-90
Identity = 164/216 (75.93%), Postives = 190/216 (87.96%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLRAV+ +D  + +EKEGLSF+ETSALEATN+EKAFQTIL+EIY I+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSS 217
           +L ++E  A A+   +G TI V ++  N+KK CCS+
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGNTKKGCCST 216

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BLAST of CmoCh16G008320 vs. Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4)

HSP 1 Score: 331.3 bits (848), Expect = 8.2e-90
Identity = 168/217 (77.42%), Postives = 189/217 (87.10%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLSF+ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSEEPAAAAANIK-EGKTIVVGESEANSKKPCCSS 217
           +L ++E AAA + I  +G TI V ++   +K+ CCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

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BLAST of CmoCh16G008320 vs. Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 8.2e-90
Identity = 167/217 (76.96%), Postives = 193/217 (88.94%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DLKHLRAV+ ED Q+ AEKEGLSF+ETSALEA N+EKAFQTIL+EIY IISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 SLNSEEPAAAAANIK-EGKTIVVGESEANSKKPCCSS 217
           +L ++E   A++N+  +G TI V ++ AN ++ CCS+
Sbjct: 181 ALAAQE---ASSNLPGQGTTINVADASANQRRSCCST 214

[Close]

BLAST of CmoCh16G008320 vs. Swiss-Prot
Match: RAA2B_ARATH (Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2 SV=2)

HSP 1 Score: 327.8 bits (839), Expect = 9.0e-89
Identity = 167/217 (76.96%), Postives = 191/217 (88.02%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLSF+ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSEEPAAAAANIK-EGKTIVVGESEANSKKPCCSS 217
           +L ++E   AA N+  +G  I + +S A ++K CCS+
Sbjct: 181 ALAAQE---AAGNLPGQGTAINISDSSATNRKGCCST 214

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BLAST of CmoCh16G008320 vs. TrEMBL
Match: A0A0A0L6P8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110590 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 2.6e-111
Identity = 213/217 (98.16%), Postives = 214/217 (98.62%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SLNSEEP AAA NIKEGKTIVVGESEAN+KK CCSSS
Sbjct: 181 SLNSEEP-AAANNIKEGKTIVVGESEANTKKACCSSS 216

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BLAST of CmoCh16G008320 vs. TrEMBL
Match: B9SKB2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0757660 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.0e-106
Identity = 203/217 (93.55%), Postives = 209/217 (96.31%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ YAE+EGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SL SEEP  A ANIKEGK IVVG SEAN+KKPCCSSS
Sbjct: 181 SLTSEEP--APANIKEGKMIVVGGSEANTKKPCCSSS 215

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BLAST of CmoCh16G008320 vs. TrEMBL
Match: A0A059AU03_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02784 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 5.7e-106
Identity = 204/217 (94.01%), Postives = 210/217 (96.77%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARR +++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
            L+SE+  AA ANIKEGKTIVVGESEAN+KK CCSSS
Sbjct: 181 PLSSED--AAPANIKEGKTIVVGESEANTKKACCSSS 215

[Close]

BLAST of CmoCh16G008320 vs. TrEMBL
Match: A0A067L1Z8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00259 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.7e-105
Identity = 202/217 (93.09%), Postives = 209/217 (96.31%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ YAE+EGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SL+SEE   A ANIKEGKTIVVG SEAN K+PCCSSS
Sbjct: 181 SLSSEE--QAPANIKEGKTIVVGGSEANVKRPCCSSS 215

[Close]

BLAST of CmoCh16G008320 vs. TrEMBL
Match: A0A061DWD1_THECC (RAB GTPase 11C OS=Theobroma cacao GN=TCM_006132 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 2.2e-105
Identity = 200/217 (92.17%), Postives = 209/217 (96.31%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+IGNKTDLKHLRAVATED QSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MMIGNKTDLKHLRAVATEDGQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SL+S+EP  A A+IKEGKTI+VG  EAN+KK CCSSS
Sbjct: 181 SLSSDEP--APASIKEGKTIIVGAQEANTKKACCSSS 215

[Close]

BLAST of CmoCh16G008320 vs. TAIR10
Match: AT1G09630.1 (AT1G09630.1 RAB GTPase 11C)

HSP 1 Score: 380.2 bits (975), Expect = 8.7e-106
Identity = 197/218 (90.37%), Postives = 208/218 (95.41%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTI-VVGESEANSKKPCCSSS 218
           S++S++   A ANIKEG+TI V   SE+N+KKPCCSSS
Sbjct: 181 SISSDQ-TTANANIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of CmoCh16G008320 vs. TAIR10
Match: AT3G46830.1 (AT3G46830.1 RAB GTPase homolog A2C)

HSP 1 Score: 331.3 bits (848), Expect = 4.6e-91
Identity = 168/217 (77.42%), Postives = 189/217 (87.10%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLSF+ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSEEPAAAAANIK-EGKTIVVGESEANSKKPCCSS 217
           +L ++E AAA + I  +G TI V ++   +K+ CCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of CmoCh16G008320 vs. TAIR10
Match: AT1G07410.1 (AT1G07410.1 RAB GTPase homolog A2B)

HSP 1 Score: 327.8 bits (839), Expect = 5.1e-90
Identity = 167/217 (76.96%), Postives = 191/217 (88.02%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLSF+ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSEEPAAAAANIK-EGKTIVVGESEANSKKPCCSS 217
           +L ++E   AA N+  +G  I + +S A ++K CCS+
Sbjct: 181 ALAAQE---AAGNLPGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of CmoCh16G008320 vs. TAIR10
Match: AT5G59150.1 (AT5G59150.1 RAB GTPase homolog A2D)

HSP 1 Score: 327.0 bits (837), Expect = 8.7e-90
Identity = 166/217 (76.50%), Postives = 189/217 (87.10%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK DL HLR+VA ED Q+ AE EGLSF+ETSALEATNVEKAFQT+L+EIY IISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 SLNSEEPAAAAANIK-EGKTIVVGESEANSKKPCCSS 217
           +L ++E AAA + I  +G TI V ++    K+ CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSGAGKRGCCST 217

[Close]

BLAST of CmoCh16G008320 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F)

HSP 1 Score: 295.4 bits (755), Expect = 2.8e-80
Identity = 151/219 (68.95%), Postives = 184/219 (84.02%), Query Frame = 1


Query: 2   ARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
           A R DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V+ + V
Sbjct: 3   AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIV 62

Query: 62  KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIM 121
           KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +TF+NV RWLKELRDH D+NIVIM
Sbjct: 63  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122

Query: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKS 181
            +GNK DL+HLRAV+TEDA+++AE+E   F+ETSALE+ NVE AF  +LS+IYR++S+K+
Sbjct: 123 FVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKA 182

Query: 182 LN-SEEPAAAAANIKEGKTIVVGESE---ANSKKPCCSS 217
           L+  ++PAA    + +G+TI VG  +   A  K  CCS+
Sbjct: 183 LDIGDDPAA----LPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of CmoCh16G008320 vs. NCBI nr
Match: gi|449431866|ref|XP_004133721.1| (PREDICTED: ras-related protein RABA2a [Cucumis sativus])

HSP 1 Score: 409.5 bits (1051), Expect = 3.8e-111
Identity = 213/217 (98.16%), Postives = 214/217 (98.62%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SLNSEEP AAA NIKEGKTIVVGESEAN+KK CCSSS
Sbjct: 181 SLNSEEP-AAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of CmoCh16G008320 vs. NCBI nr
Match: gi|659102651|ref|XP_008452243.1| (PREDICTED: ras-related protein RABA2a [Cucumis melo])

HSP 1 Score: 408.3 bits (1048), Expect = 8.4e-111
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SLNSEEP +AA NIKEGKTIVVGESEAN+KK CCSSS
Sbjct: 181 SLNSEEP-SAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of CmoCh16G008320 vs. NCBI nr
Match: gi|255570960|ref|XP_002526431.1| (PREDICTED: ras-related protein RABA2a [Ricinus communis])

HSP 1 Score: 393.3 bits (1009), Expect = 2.8e-106
Identity = 203/217 (93.55%), Postives = 209/217 (96.31%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ YAE+EGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SL SEEP  A ANIKEGK IVVG SEAN+KKPCCSSS
Sbjct: 181 SLTSEEP--APANIKEGKMIVVGGSEANTKKPCCSSS 215

[Close]

BLAST of CmoCh16G008320 vs. NCBI nr
Match: gi|702469289|ref|XP_010030204.1| (PREDICTED: ras-related protein RABA2a [Eucalyptus grandis])

HSP 1 Score: 391.7 bits (1005), Expect = 8.1e-106
Identity = 204/217 (94.01%), Postives = 210/217 (96.77%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARR +++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
            L+SE+  AA ANIKEGKTIVVGESEAN+KK CCSSS
Sbjct: 181 PLSSED--AAPANIKEGKTIVVGESEANTKKACCSSS 215

[Close]

BLAST of CmoCh16G008320 vs. NCBI nr
Match: gi|802563071|ref|XP_012066700.1| (PREDICTED: ras-related protein RABA2a [Jatropha curcas])

HSP 1 Score: 390.2 bits (1001), Expect = 2.4e-105
Identity = 202/217 (93.09%), Postives = 209/217 (96.31%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ YAE+EGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 218
           SL+SEE   A ANIKEGKTIVVG SEAN K+PCCSSS
Sbjct: 181 SLSSEE--QAPANIKEGKTIVVGGSEANVKRPCCSSS 215

The following BLAST results are available for this feature:

BLAST of CmoCh16G008320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA2A_ARATH	1.5e-104	90.37	Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1	[more]
RB11C_LOTJA	6.3e-90	75.93	Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1	[more]
RAA2C_ARATH	8.2e-90	77.42	Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4	[more]
RB2BV_BETVU	8.2e-90	76.96	Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1	[more]
RAA2B_ARATH	9.0e-89	76.96	Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2 SV=2	[more]

BLAST of CmoCh16G008320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6P8_CUCSA	2.6e-111	98.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110590 PE=4 SV=1	[more]
B9SKB2_RICCO	2.0e-106	93.55	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0757660 PE=4 SV=1	[more]
A0A059AU03_EUCGR	5.7e-106	94.01	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02784 PE=4 SV=1	[more]
A0A067L1Z8_JATCU	1.7e-105	93.09	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00259 PE=4 SV=1	[more]
A0A061DWD1_THECC	2.2e-105	92.17	RAB GTPase 11C OS=Theobroma cacao GN=TCM_006132 PE=4 SV=1	[more]

BLAST of CmoCh16G008320 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09630.1	8.7e-106	90.37	RAB GTPase 11C	[more]
AT3G46830.1	4.6e-91	77.42	RAB GTPase homolog A2C	[more]
AT1G07410.1	5.1e-90	76.96	RAB GTPase homolog A2B	[more]
AT5G59150.1	8.7e-90	76.50	RAB GTPase homolog A2D	[more]
AT5G60860.1	2.8e-80	68.95	RAB GTPase homolog A1F	[more]

BLAST of CmoCh16G008320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449431866\|ref\|XP_004133721.1\|	3.8e-111	98.16	PREDICTED: ras-related protein RABA2a [Cucumis sativus]	[more]
gi\|659102651\|ref\|XP_008452243.1\|	8.4e-111	97.70	PREDICTED: ras-related protein RABA2a [Cucumis melo]	[more]
gi\|255570960\|ref\|XP_002526431.1\|	2.8e-106	93.55	PREDICTED: ras-related protein RABA2a [Ricinus communis]	[more]
gi\|702469289\|ref\|XP_010030204.1\|	8.1e-106	94.01	PREDICTED: ras-related protein RABA2a [Eucalyptus grandis]	[more]
gi\|802563071\|ref\|XP_012066700.1\|	2.4e-105	93.09	PREDICTED: ras-related protein RABA2a [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0008150	biological_process
cellular_component	GO:0009504	cell plate
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005768	endosome
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G008320.1	CmoCh16G008320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 14..174 score: 1.2
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 11..170 score: 9.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 5..214 score: 5.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..182 score: 1.82
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 116..129 score: 1.2E-42coord: 54..76 score: 1.2E-42coord: 151..173 score: 1.2E-42coord: 13..34 score: 1.2E-42coord: 36..52 score: 1.2
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 4..216 score: 5.4E
None	No IPR available	PANTHER	PTHR24073:SF484	RAS-RELATED PROTEIN RABA2B	coord: 4..216 score: 5.4E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 score: 5.6
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 15..172 score: 7.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 score: 2.7E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..213 score: 3.
None	No IPR available	PROFILE	PS51419	RAB	coord: 8..214 score: 36

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G008320	Cucsa.114210	Cucumber (Gy14) v1	cgycmoB0272
CmoCh16G008320	CmaCh16G007690	Cucurbita maxima (Rimu)	cmacmoB322
CmoCh16G008320	CmaCh04G008940	Cucurbita maxima (Rimu)	cmacmoB700
CmoCh16G008320	Cla011813	Watermelon (97103) v1	cmowmB303
CmoCh16G008320	Csa3G110590	Cucumber (Chinese Long) v2	cmocuB318
CmoCh16G008320	MELO3C016491	Melon (DHL92) v3.5.1	cmomeB285
CmoCh16G008320	ClCG10G007150	Watermelon (Charleston Gray)	cmowcgB278
CmoCh16G008320	CSPI03G06360	Wild cucumber (PI 183967)	cmocpiB326
CmoCh16G008320	Cp4.1LG14g00470	Cucurbita pepo (Zucchini)	cmocpeB307
CmoCh16G008320	Cp4.1LG01g08520	Cucurbita pepo (Zucchini)	cmocpeB312
CmoCh16G008320	MELO3C016491.2	Melon (DHL92) v3.6.1	cmomedB333
CmoCh16G008320	CsaV3_3G006490	Cucumber (Chinese Long) v3	cmocucB0380
CmoCh16G008320	Bhi11G000605	Wax gourd	cmowgoB0421
CmoCh16G008320	CsGy3G006470	Cucumber (Gy14) v2	cgybcmoB313
CmoCh16G008320	Carg00011	Silver-seed gourd	carcmoB0920
CmoCh16G008320	Carg25384	Silver-seed gourd	carcmoB0762

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh16G008320	CmoCh04G009600	Cucurbita moschata (Rifu)	cmocmoB285

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G008320	Watermelon (97103) v2	cmowmbB322
CmoCh16G008320	Wax gourd	cmowgoB0418
CmoCh16G008320	Bottle gourd (USVL1VR-Ls)	cmolsiB302
CmoCh16G008320	Bottle gourd (USVL1VR-Ls)	cmolsiB305