Carg00011 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00011
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ras-related protein like
Location	Cucurbita_argyrosperma_scaffold_001 : 40456 .. 42457 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTTCTAAGTGGGGCACCCGATTTGGGAGGGACAATTTCTTCAATTTTGCTTTCCGAGATTTCGGAAAGCTAAATCTTCAGAACCAGGAACCAGAGAGAGAGAGAGACCAGCGAGATAATATGGCCCGGAGACCCGACGATGACTACGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCCGGCGTTGGAAAATCCAACCTTCTTTCCCGGTTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTCTCTCTCTCAATTTTCTCTCTCATTTCGGTATTTATATCTACGTTCGTTGTATGTTTGTGTGCTTTACATTCTCGATCTATGTAAAAATTCGCGGGAACGCGAATTTTTATTTGGAGAATTTTTTTGATGTACTTAAAGTAATGATCTGATTTTCTTTTTTCCGTTTAAAACTGGCGGTTTTTATTTGAATTGAGATTGTGCATCTTCGCTTGCGGATCTGCGTTCTCAATTGGTTGTTCTGGTAATTTTCGTTTTAATTTAGGGGAATGCGGGAAATTGGTCGTCTTTTTACTGCTTTGGATTAGGACAACGAATTGAGAAAAATGTCTATGGATTTGTTTAGGTTTATAACTTTTGATTGAAGTTATTCAGATTCTGATCTGGTATGGGCTAGAGATTTCATCCTAACTTTTAATGGAGATACATCTGCAGATCATGATTGGTTGTTTTTATGCCGGTTAATTTCCCACAAAACCTTAACGCCAAATATGAATCTGAATTAACGACTCCTTTTCTGGTAATACAATTATTATCTTGGTTCTTATACAAATTTTGATTATGCAAATTTACAGTTTAAACCATTCGAGTGTTTTATAAAGGACAAGCATTTTACAAATTGTTAAACAATGAAGAATCATATACAATTCTTCTATCCGCAACACCTGATTTACACTGGAATATGAGGTCATTTAAATCTCAGTTTCTTGGAAGTATGGCTGGTAGATAGAAATTTTTATTTAGTTAGTGTCCTGTTATACATATAGATGTTTTGATAATAGATTTTGGAACTTCTTGGATCAATGTCGTATTCAAATGGCTATGTGATATTAGTGTCACATTTGTTGAACTGAAAGAAAATGTTCTCTTTTTTCTTTTTCTACTGCGCTTTGACTATCAAAGTTACCAAGAAAAGCAATGCTACATACTTTATATTAGGTTGAGGGAAGAACCGTGAAAGCTCAGATATGGGACACGGCCGGTCAAGAGCGTTACAGAGCAATAACCAGTGCTTACTATAGGGGTGCCCTCGGAGCCCTTCTAGTATACGATGTAACGAAACCGATGACATTCGACAATGTAAACCGTTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGTAACAAGACCGATCTGAAACACCTCCGAGCAGTGGCAACAGAAGACGCACAGAGCTACGCCGAGAAAGAAGGGCTGTCATTCATTGAAACTTCTGCTCTTGAAGCAACAAACGTGGAGAAGGCTTTCCAAACCATTCTCTCAGAGATATATAGGATAATCAGTAAGAAGTCCCTCAATTCGGATGAGCCTGCTACTGCTAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCAGAGGGCAATTCGAAGAAGGCTTGTTGCTCCTCTTCTTAAGTTCAGAAAAATATCCCCACAATTTTTTGTAACTCTCCTCTCTCTCTCTCTCCCTCTGTTCTTGGTCATCTGCTTACGCATATCTTTCTAGTTACCAACTCTATTCTGTTATTCTTGTTTGCTTGGATTTTGTTGGTGTATAATTTTCATATAATTTATATTTTACTTAGATTTTTTTTTTCAAGAGATCATTGAGATCTCATGTCAGAAACACTATTGAGCGGTTCATTTCAGAGTTTGTCTGTTTTTATGGAATCTCTATGTTGGAGAATCAAATGTGAATGTCTTATTTT

mRNA sequence

CATTTTCTAAGTGGGGCACCCGATTTGGGAGGGACAATTTCTTCAATTTTGCTTTCCGAGATTTCGGAAAGCTAAATCTTCAGAACCAGGAACCAGAGAGAGAGAGAGACCAGCGAGATAATATGGCCCGGAGACCCGACGATGACTACGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCCGGCGTTGGAAAATCCAACCTTCTTTCCCGGTTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACCGTGAAAGCTCAGATATGGGACACGGCCGGTCAAGAGCGTTACAGAGCAATAACCAGTGCTTACTATAGGGGTGCCCTCGGAGCCCTTCTAGTATACGATGTAACGAAACCGATGACATTCGACAATGTAAACCGTTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGTAACAAGACCGATCTGAAACACCTCCGAGCAGTGGCAACAGAAGACGCACAGAGCTACGCCGAGAAAGAAGGGCTGTCATTCATTGAAACTTCTGCTCTTGAAGCAACAAACGTGGAGAAGGCTTTCCAAACCATTCTCTCAGAGATATATAGGATAATCAGTAAGAAGTCCCTCAATTCGGATGAGCCTGCTACTGCTAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCAGAGGGCAATTCGAAGAAGGCTTGTTGCTCCTCTTCTTAAGTTCAGAAAAATATCCCCACAATTTTTTGTAACTCTCCTCTCTCTCTCTCTCCCTCTGTTCTTGGTCATCTGCTTACGCATATCTTTCTAGTTACCAACTCTATTCTGTTATTCTTGTTTGCTTGGATTTTGTTGGTGTATAATTTTCATATAATTTATATTTTACTTAGATTTTTTTTTTCAAGAGATCATTGAGATCTCATGTCAGAAACACTATTGAGCGGTTCATTTCAGAGTTTGTCTGTTTTTATGGAATCTCTATGTTGGAGAATCAAATGTGAATGTCTTATTTT

Coding sequence (CDS)

ATGGCCCGGAGACCCGACGATGACTACGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCCGGCGTTGGAAAATCCAACCTTCTTTCCCGGTTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACCGTGAAAGCTCAGATATGGGACACGGCCGGTCAAGAGCGTTACAGAGCAATAACCAGTGCTTACTATAGGGGTGCCCTCGGAGCCCTTCTAGTATACGATGTAACGAAACCGATGACATTCGACAATGTAAACCGTTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGTAACAAGACCGATCTGAAACACCTCCGAGCAGTGGCAACAGAAGACGCACAGAGCTACGCCGAGAAAGAAGGGCTGTCATTCATTGAAACTTCTGCTCTTGAAGCAACAAACGTGGAGAAGGCTTTCCAAACCATTCTCTCAGAGATATATAGGATAATCAGTAAGAAGTCCCTCAATTCGGATGAGCCTGCTACTGCTAACATCAAGGAAGGAAAAACCATTGTGGTTGGTGAATCAGAGGGCAATTCGAAGAAGGCTTGTTGCTCCTCTTCTTAA

Protein sequence

MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPATANIKEGKTIVVGESEGNSKKACCSSS

Homology

[Close]

BLAST of Carg00011 vs. NCBI nr
Match: XP_022943001.1 (ras-related protein RABA2a-like [Cucurbita moschata])

HSP 1 Score: 418.7 bits (1075), Expect = 1.2e-113
Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEGNSKKACCSSS 216
           SLNSDEPATANIKEGKTIVVGESE NSKKACCSSS
Sbjct: 181 SLNSDEPATANIKEGKTIVVGESEDNSKKACCSSS 215

[Close]

BLAST of Carg00011 vs. NCBI nr
Match: XP_022989944.1 (ras-related protein RABA2a-like [Cucurbita maxima])

HSP 1 Score: 414.8 bits (1065), Expect = 1.7e-112
Identity = 211/215 (98.14%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSY+EKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYSEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEGNSKKACCSSS 216
           SLNSDEPA ANIKEGKTIVVGESE NSKKACCSSS
Sbjct: 181 SLNSDEPAAANIKEGKTIVVGESEANSKKACCSSS 215

[Close]

BLAST of Carg00011 vs. NCBI nr
Match: XP_023517501.1 (ras-related protein RABA2a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408.7 bits (1049), Expect = 1.2e-110
Identity = 211/216 (97.69%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLS IETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEP-ATANIKEGKTIVVGESEGNSKKACCSSS 216
           SLNSDEP A ANIKEGK+IVVGESE NSKKACCSSS
Sbjct: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS 216

[Close]

BLAST of Carg00011 vs. NCBI nr
Match: XP_004133721.1 (PREDICTED: ras-related protein RABA2a [Cucumis sativus] >KGN56262.1 hypothetical protein Csa_3G110590 [Cucumis sativus])

HSP 1 Score: 407.9 bits (1047), Expect = 2.1e-110
Identity = 210/216 (97.22%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATA-NIKEGKTIVVGESEGNSKKACCSSS 216
           SLNS+EPA A NIKEGKTIVVGESE N+KKACCSSS
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Carg00011 vs. NCBI nr
Match: XP_008452243.1 (PREDICTED: ras-related protein RABA2a [Cucumis melo] >XP_008452244.1 PREDICTED: ras-related protein RABA2a [Cucumis melo])

HSP 1 Score: 406.8 bits (1044), Expect = 4.7e-110
Identity = 209/216 (96.76%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATA-NIKEGKTIVVGESEGNSKKACCSSS 216
           SLNS+EP+ A NIKEGKTIVVGESE N+KKACCSSS
Sbjct: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Carg00011 vs. TAIR10
Match: AT1G09630.1 (RAB GTPase 11C)

HSP 1 Score: 378.6 bits (971), Expect = 2.5e-105
Identity = 196/217 (90.32%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSDE-PATANIKEGKTI-VVGESEGNSKKACCSSS 216
           S++SD+  A ANIKEG+TI V   SE N+KK CCSSS
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of Carg00011 vs. TAIR10
Match: AT5G59150.1 (RAB GTPase homolog A2D)

HSP 1 Score: 328.9 bits (842), Expect = 2.3e-90
Identity = 166/217 (76.50%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK DL HLR+VA ED Q+ AE EGLSF+ETSALEATNVEKAFQT+L+EIY IISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 SLNSDEPATANIK---EGKTIVVGESEGNSKKACCSS 215
           +L + E A AN     +G TI V ++ G  K+ CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSGAGKRGCCST 217

[Close]

BLAST of Carg00011 vs. TAIR10
Match: AT3G46830.1 (RAB GTPase homolog A2C)

HSP 1 Score: 316.2 bits (809), Expect = 1.5e-86
Identity = 161/217 (74.19%), Postives = 180/217 (82.95%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS         +ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLXXXXXXXXLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSDEPATANIK---EGKTIVVGESEGNSKKACCSS 215
           +L + E A AN     +G TI V ++ G +K+ACCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of Carg00011 vs. TAIR10
Match: AT1G07410.1 (RAB GTPase homolog A2B)

HSP 1 Score: 308.5 bits (789), Expect = 3.2e-84
Identity = 156/214 (72.90%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S          ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSXXXXXXXXXXETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEGNSKKACCSS 215
           +L + E A     +G  I + +S   ++K CCS+
Sbjct: 181 ALAAQEAAGNLPGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of Carg00011 vs. TAIR10
Match: AT1G16920.1 (RAB GTPase homolog A1B)

HSP 1 Score: 297.7 bits (761), Expect = 5.6e-81
Identity = 150/212 (70.75%), Postives = 178/212 (83.96%), Query Frame = 0


Query: 4   RPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
           R +DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL+V+G+ VKA
Sbjct: 5   RVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKA 64

Query: 64  QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVIMLI 123
           QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+  TF+NV+RWLKEL++H D NIV+ML+
Sbjct: 65  QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLV 124

Query: 124 GNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLN 183
           GNK+DL+HL AV TED +SYAE+E L F+ETSALEATNVE AF  +L++IYRI SKK + 
Sbjct: 125 GNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVE 184

Query: 184 SDEPATANIKEGKTIVVGESEGNSKK-ACCSS 215
           + E   A++ +G+ I V       KK  CCS+
Sbjct: 185 AGEDGNASVPKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Carg00011 vs. Swiss-Prot
Match: sp|O04486|RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana OX=3702 GN=RABA2A PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 4.5e-104
Identity = 196/217 (90.32%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSDE-PATANIKEGKTI-VVGESEGNSKKACCSSS 216
           S++SD+  A ANIKEG+TI V   SE N+KK CCSSS
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of Carg00011 vs. Swiss-Prot
Match: sp|Q39434|RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 3.7e-90
Identity = 164/214 (76.64%), Postives = 189/214 (88.32%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DLKHLRAV+ ED Q+ AEKEGLSF+ETSALEA N+EKAFQTIL+EIY IISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEGNSKKACCSS 215
           +L + E ++    +G TI V ++  N +++CCS+
Sbjct: 181 ALAAQEASSNLPGQGTTINVADASANQRRSCCST 214

[Close]

BLAST of Carg00011 vs. Swiss-Prot
Match: sp|Q40193|RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 3.1e-89
Identity = 166/217 (76.50%), Postives = 190/217 (87.56%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLRAV+ +D  + +EKEGLSF+ETSALEATN+EKAFQTIL+EIY I+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 181 SLNSDEPATANIK---EGKTIVVGESEGNSKKACCSS 215
           +L + E ATA      +G TI V ++ GN+KK CCS+
Sbjct: 181 ALAAQE-ATAGASVPGQGTTINVADTSGNTKKGCCST 216

[Close]

BLAST of Carg00011 vs. Swiss-Prot
Match: sp|Q9FIF9|RAA2D_ARATH (Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.1e-89
Identity = 166/217 (76.50%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK DL HLR+VA ED Q+ AE EGLSF+ETSALEATNVEKAFQT+L+EIY IISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 SLNSDEPATANIK---EGKTIVVGESEGNSKKACCSS 215
           +L + E A AN     +G TI V ++ G  K+ CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSGAGKRGCCST 217

[Close]

BLAST of Carg00011 vs. Swiss-Prot
Match: sp|Q39572|YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC6 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 8.5e-87
Identity = 163/217 (75.12%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M+ +PDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+G+T
Sbjct: 1   MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK +TF+NV RWLKELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           ML+GNK+DLKHLR V TE AQ++ E+EGLSFIETSALE+TNVEKAFQ IL+EIY I+SKK
Sbjct: 121 MLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKK 180

Query: 181 SLNSDEPATANIKEGKTIVV----GESEGNSKKACCS 214
            L+S E     I EG+ ++V     +  G  K  CCS
Sbjct: 181 VLDS-EDNRPKIGEGRDVIVIDNAHDDGGKKKGGCCS 216

[Close]

BLAST of Carg00011 vs. TrEMBL
Match: tr|A0A0A0L6P8|A0A0A0L6P8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110590 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.4e-110
Identity = 210/216 (97.22%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATA-NIKEGKTIVVGESEGNSKKACCSSS 216
           SLNS+EPA A NIKEGKTIVVGESE N+KKACCSSS
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Carg00011 vs. TrEMBL
Match: tr|A0A1S3BTD1|A0A1S3BTD1_CUCME (ras-related protein RABA2a OS=Cucumis melo OX=3656 GN=LOC103493317 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 3.1e-110
Identity = 209/216 (96.76%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATA-NIKEGKTIVVGESEGNSKKACCSSS 216
           SLNS+EP+ A NIKEGKTIVVGESE N+KKACCSSS
Sbjct: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Carg00011 vs. TrEMBL
Match: tr|A0A2C9V5L6|A0A2C9V5L6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G115900 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 2.5e-107
Identity = 201/215 (93.49%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAE+EGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEGNSKKACCSSS 216
           SL+S+EP  ANIKEGKTIVVG SEGN+KK CCSSS
Sbjct: 181 SLSSEEPTPANIKEGKTIVVGGSEGNAKKPCCSSS 215

[Close]

BLAST of Carg00011 vs. TrEMBL
Match: tr|A0A061DWD1|A0A061DWD1_THECC (RAB GTPase 11C OS=Theobroma cacao OX=3641 GN=TCM_006132 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 4.2e-107
Identity = 200/215 (93.02%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+IGNKTDLKHLRAVATED QSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MMIGNKTDLKHLRAVATEDGQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEGNSKKACCSSS 216
           SL+SDEPA A+IKEGKTI+VG  E N+KKACCSSS
Sbjct: 181 SLSSDEPAPASIKEGKTIIVGAQEANTKKACCSSS 215

[Close]

BLAST of Carg00011 vs. TrEMBL
Match: tr|A0A059AU03|A0A059AU03_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I02784 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 2.1e-106
Identity = 201/215 (93.49%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARR +++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPATANIKEGKTIVVGESEGNSKKACCSSS 216
            L+S++ A ANIKEGKTIVVGESE N+KKACCSSS
Sbjct: 181 PLSSEDAAPANIKEGKTIVVGESEANTKKACCSSS 215

The following BLAST results are available for this feature:

BLAST of Carg00011 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943001.1	1.2e-113	99.53	ras-related protein RABA2a-like [Cucurbita moschata]	[more]
XP_022989944.1	1.7e-112	98.14	ras-related protein RABA2a-like [Cucurbita maxima]	[more]
XP_023517501.1	1.2e-110	97.69	ras-related protein RABA2a-like [Cucurbita pepo subsp. pepo]	[more]
XP_004133721.1	2.1e-110	97.22	PREDICTED: ras-related protein RABA2a [Cucumis sativus] >KGN56262.1 hypothetical...	[more]
XP_008452243.1	4.7e-110	96.76	PREDICTED: ras-related protein RABA2a [Cucumis melo] >XP_008452244.1 PREDICTED: ...	[more]

BLAST of Carg00011 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09630.1	2.5e-105	90.32	RAB GTPase 11C	[more]
AT5G59150.1	2.3e-90	76.50	RAB GTPase homolog A2D	[more]
AT3G46830.1	1.5e-86	74.19	RAB GTPase homolog A2C	[more]
AT1G07410.1	3.2e-84	72.90	RAB GTPase homolog A2B	[more]
AT1G16920.1	5.6e-81	70.75	RAB GTPase homolog A1B	[more]

BLAST of Carg00011 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04486\|RAA2A_ARATH	4.5e-104	90.32	Ras-related protein RABA2a OS=Arabidopsis thaliana OX=3702 GN=RABA2A PE=2 SV=1	[more]
sp\|Q39434\|RB2BV_BETVU	3.7e-90	76.64	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
sp\|Q40193\|RB11C_LOTJA	3.1e-89	76.50	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
sp\|Q9FIF9\|RAA2D_ARATH	4.1e-89	76.50	Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1	[more]
sp\|Q39572\|YPTC6_CHLRE	8.5e-87	75.12	Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC6 PE=3 SV=...	[more]

BLAST of Carg00011 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6P8\|A0A0A0L6P8_CUCSA	1.4e-110	97.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110590 PE=4 SV=1	[more]
tr\|A0A1S3BTD1\|A0A1S3BTD1_CUCME	3.1e-110	96.76	ras-related protein RABA2a OS=Cucumis melo OX=3656 GN=LOC103493317 PE=4 SV=1	[more]
tr\|A0A2C9V5L6\|A0A2C9V5L6_MANES	2.5e-107	93.49	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G115900 PE=4 SV=...	[more]
tr\|A0A061DWD1\|A0A061DWD1_THECC	4.2e-107	93.02	RAB GTPase 11C OS=Theobroma cacao OX=3641 GN=TCM_006132 PE=4 SV=1	[more]
tr\|A0A059AU03\|A0A059AU03_EUCGR	2.1e-106	93.49	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I02784 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00011-RA	Carg00011-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 116..129 score: 50.58 coord: 13..34 score: 55.2 coord: 151..173 score: 43.68 coord: 54..76 score: 52.08 coord: 36..52 score: 36.23
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..211 e-value: 5.7E-6 score: 35.2
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 e-value: 5.4E-27 score: 105.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 e-value: 6.8E-112 score: 387.7
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 15..172 e-value: 7.4E-12 score: 32.1
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 6..212 e-value: 7.9E-70 score: 236.3
None	No IPR available	PANTHER	PTHR24073:SF613	RAS-RELATED PROTEIN RABA2A	coord: 1..213
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..213
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..212 score: 36.791
None	No IPR available	CDD	cd01868	Rab11_like	coord: 10..174 e-value: 4.96394E-128 score: 360.337
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..170 e-value: 4.4E-41 score: 138.3
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 14..174 e-value: 1.1E-61 score: 207.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..181

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00011	Cla011813	Watermelon (97103) v1	carwmB0664
Carg00011	Csa3G110590	Cucumber (Chinese Long) v2	carcuB0684
Carg00011	MELO3C016491	Melon (DHL92) v3.5.1	carmeB0670
Carg00011	ClCG10G007150	Watermelon (Charleston Gray)	carwcgB0641
Carg00011	CSPI03G06360	Wild cucumber (PI 183967)	carcpiB0696
Carg00011	Cucsa.114210	Cucumber (Gy14) v1	carcgyB0741
Carg00011	CmaCh04G008940	Cucurbita maxima (Rimu)	carcmaB0948
Carg00011	CmaCh16G007690	Cucurbita maxima (Rimu)	carcmaB0946
Carg00011	CmoCh04G009600	Cucurbita moschata (Rifu)	carcmoB0923
Carg00011	CmoCh16G008320	Cucurbita moschata (Rifu)	carcmoB0920
Carg00011	Cp4.1LG14g00470	Cucurbita pepo (Zucchini)	carcpeB0937
Carg00011	Cp4.1LG01g08520	Cucurbita pepo (Zucchini)	carcpeB0938
Carg00011	CsGy3G006470	Cucumber (Gy14) v2	carcgybB0659
Carg00011	MELO3C016491.2	Melon (DHL92) v3.6.1	carmedB0683
Carg00011	CsaV3_3G006490	Cucumber (Chinese Long) v3	carcucB0698
Carg00011	Bhi11G000605	Wax gourd	carwgoB0779

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00011	Carg25384	Silver-seed gourd	carcarB519

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00011	Bottle gourd (USVL1VR-Ls)	carlsiB614
Carg00011	Watermelon (97103) v2	carwmbB0686
Carg00011	Wax gourd	carwgoB0778