Cp4.1LG14g00470 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g00470
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ras-related protein Rab-11A
Location	Cp4.1LG14 : 4392820 .. 4397668 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGATTCGAATAAGTTACTAACTATAAAAAAAGATTTTGTTGGATTCCGTTAAAAAATCTAAATAAAAAAATTTAATGATTAAATAAGAGATATTTAAAAAAAAAAAAAAAAAAAAGTTTAAAGGGTAAATAAGGGATGTTTCGGTAATTAAGTCGATGATGGGGCGGTTGGTCGAAAATGCCCCTACCTTGAAGGGCAGTTTTGGGCACAGAATTGCTCTGTCAATCCCAGGATTTGAAGTCCGCAGACTCTCCATTTCGTCTTCATATTCAAAGTGGAGCAGCCGATTCTTGAGGAACAGATTCTTCAATTTTGCTTTCCAGATTTGGGGAAGCTAAATCTGTGAGCCAAAGATCGAGGAACGAGAGAGAGAGAGAGGAAATACCGGCGAGATATGGCCAGGAGACCCGACGACGACTATGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCTGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGCTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTATCTCTCACTCTTAGTTTCTCTCTCATTGGATATTTATATCTGCCTCCGCTGTGTGTTCGCATGCTTTGCATTCTCGATCTGTTTGTAAATCTGCATTTGGATGTATTCTGGAACTCGAACTTTCTTGAAAGTTGTTATTCAAGGAATGATCTGATTTCTTTCTCGCTTGAAACAGTCGTTTTTTCAAAATCTGAATTGAGTTTGTGCATCTTCTCTTGCGGATCTGTGTTCTTGATTCGTTGTTCTTCTTGTATTTTCATTTTAACTTAGAGGAATGCGGGAAGTTATTAGTCTCTTTACTGATCTGGATTTCGATGATGAATTGAGAAAAACGCCTGATTAGGTATAGCGTTTGATGGAAATTATTCAAATTCTGATCTGTGGATCGGTAAGAGATTCCATCCTAACTGTTAACGGAGATATATCTGAATATCATAATTGATTGTTTTGATGCCATTTAATTCAGTCCATAGAACCTTAATGCCATTCTTTAAAAATAAGAATCTGGAAAATGCAATTATTATTCAGATTTTGTTTATGCATTCCACCCTTCTTCCATTCCTTCCTTTCCTTTTTTATTACGCAAACTTGACACGTTCAAGCAATTTGATAGCAATTCTAAAGAGGAAATGCATTTCATCAAGTACTTACCAAAGTGGAGAAACATTTGCAATTCTAGCCGCTCGCTGCAGATTTTGATTTACACTGCATTATGTGGTCGTTTAAATCTCAGTTTCTTGGACTATAGTTGATACCTGGAAAATGTTCTTTAGTTAGTGATCTTGTCACGCACATAAACACACGTTTTGATGATAGATTTTGGAGCTTCTTGGGTCGTCTATGTGATGTTAGTGGCACATTTGTTGAACTAATCGTTGCCATAATCTGGATCTCTGCAGAATGATGGAACTTTTGTGATATCTGTAGTTCTTGTCCTGCTAAAGATTTCGAACTCATTTTTGTTTGTCTTGTAAGCTGAGTTAATGTCGAACGCGGTGGTGACTCCTCGCTAATTTAGGAAATGATCATGGGTTTATAAGTGATGAATACTAACTCCATTGGTTTGAGGCCTTTTGGGGAAACCCAAAAAAAGCCCTGAGAGCTTATGCTCAAAATGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCAAACAGCTAGATGACTGAAACTGTTCGGTTTTTCGGAGCCCTTTTCCTTTTTACCCTCTCAGACTAAAATTACAGGCGCATGGTTTCCAATTTTATTTTCTGATTCTTGCCTATGAAGTTAATCTTTGCTTTATAAAATCAACAAAACGTTTTGGATATACAAACAGAACAGCTTTTGATCATTTGTTTGATATGACATTTTAGCCTTAAGGTGGGTTTAAGGGATCCATTATATTATGAAAGTTATCAAGAACTGTTCTGCTTATTTATCAGGTTGAGGGAAGAACTGTGAAAGCCCAGATATGGGACACAGCCGGTCAAGAGCGATACAGAGCGATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCTCTTCTCGTGTACGACGTAACAAAACCGATGACATTTGATAACGTAAGCCGTTGGTTGAAGGAACTCAGAGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGAAACAAGACTGATCTGAAACACCTCCGAGCGGTGGCAACGGAGGACGCTCAAAGCTATGCCGAGAAAGAAGGGCTGTCGTTCATCGAAACATCTGCTCTTGAAGCAACAAATGTGGAGAAGGCTTTCCAAACAATTCTCTCAGAGATATATCGGATAATCAGCAAGAAGTCCCTCAATTCAGAGGAGCCCGCTGCTGCTGCTGCTAACATCAAAGAAGGTAAAACCATTGTGGTTGGTGAATCTGAGGCCAATTCAAAGAAGCCTTGTTGCTCATCTTCTTAAGTTCGCAAAATATTTCCACAATTTTTGGATCTCTCTCTCTATCTCTTCTTTGTTCATCTGCTCGTTGATTACTTTCTAGTTACCAACTCTGTTCTGTTTTTTGTTTGCTTGGATTTACATTGATATATAATTTACATATAATTCATATTTTACTTCAGAATTTTTTTTTTTTTGGTTTTTTTATTTTAAATTTAACTTAGGTATAATTTTGAGGTGACCTCGGTAGTTTGAACCGTTCGATCGAACATATTATTTCTTAGTTGTGCCTGTTTGGTATCGAGCTCTTTGAGGGCCTTTCTTTATCCATTCACACTAAAAGGTAGTGAGTGGAGTCAGGCACAAAGCGATCCTCAGTTGCCGAGATCAGCCTTGTGCTATCTTAGGCTATCTTCTGTTGAAGTGGTGACTCACCAGTTACCGAGATCAGACTTGTGCTATCTTAGGCTATCTTCTGTTGAAGTGGTGACTCACCGGTTGCCGAGATCAGCCTTGTGCTATCTTCTGTTGAAGTGGTGACTCACCGGTTGCCGAGATCAGCCTTGTGCTATCTTCTGTTGAAGTGGTGACTCACCGGTTGCCGAGATCAGCCTTGTGCTATCTTCTGTTGAAGTGGTGACTCACCGGTTGCCGAGATCAGCCTTGTGCTATCTTTTGTTGAAGTGGTGACTCACCGGTTGCCGAGATCAACCTTGTGCTATCTTTTGTTGAAGTGGTGACTCATCGGTTGCTGAGATCAACCTTGTGCTATCTTCGGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTG

mRNA sequence

AATGATTCGAATAAGTTACTAACTATAAAAAAAGATTTTGTTGGATTCCGTTAAAAAATCTAAATAAAAAAATTTAATGATTAAATAAGAGATATTTAAAAAAAAAAAAAAAAAAAAGTTTAAAGGGTAAATAAGGGATGTTTCGGTAATTAAGTCGATGATGGGGCGGTTGGTCGAAAATGCCCCTACCTTGAAGGGCAGTTTTGGGCACAGAATTGCTCTGTCAATCCCAGGATTTGAAGTCCGCAGACTCTCCATTTCGTCTTCATATTCAAAGTGGAGCAGCCGATTCTTGAGGAACAGATTCTTCAATTTTGCTTTCCAGATTTGGGGAAGCTAAATCTGTGAGCCAAAGATCGAGGAACGAGAGAGAGAGAGAGGAAATACCGGCGAGATATGGCCAGGAGACCCGACGACGACTATGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCTGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGCTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACTGTGAAAGCCCAGATATGGGACACAGCCGGTCAAGAGCGATACAGAGCGATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCTCTTCTCGTGTACGACGTAACAAAACCGATGACATTTGATAACGTAAGCCGTTGGTTGAAGGAACTCAGAGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGAAACAAGACTGATCTGAAACACCTCCGAGCGGTGGCAACGGAGGACGCTCAAAGCTATGCCGAGAAAGAAGGGCTGTCGTTCATCGAAACATCTGCTCTTGAAGCAACAAATGTGGAGAAGGCTTTCCAAACAATTCTCTCAGAGATATATCGGATAATCAGCAAGAAGTCCCTCAATTCAGAGGAGCCCGCTGCTGCTGCTGCTAACATCAAAGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTG

Coding sequence (CDS)

ATGGCCAGGAGACCCGACGACGACTATGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCTGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGCTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACTGTGAAAGCCCAGATATGGGACACAGCCGGTCAAGAGCGATACAGAGCGATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCTCTTCTCGTGTACGACGTAACAAAACCGATGACATTTGATAACGTAAGCCGTTGGTTGAAGGAACTCAGAGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGAAACAAGACTGATCTGAAACACCTCCGAGCGGTGGCAACGGAGGACGCTCAAAGCTATGCCGAGAAAGAAGGGCTGTCGTTCATCGAAACATCTGCTCTTGAAGCAACAAATGTGGAGAAGGCTTTCCAAACAATTCTCTCAGAGATATATCGGATAATCAGCAAGAAGTCCCTCAATTCAGAGGAGCCCGCTGCTGCTGCTGCTAACATCAAAGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTGGTGACTCACCAGTCTGTTGAAGTG

Protein sequence

MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPAAAAANIKEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEV

Homology

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BLAST of Cp4.1LG14g00470 vs. Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-96
Identity = 182/196 (92.86%), Postives = 190/196 (96.94%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSEEPAAAAANIKE 197
           S++S++   A ANIKE
Sbjct: 181 SISSDQ-TTANANIKE 195

[Close]

BLAST of Cp4.1LG14g00470 vs. Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4)

HSP 1 Score: 318.5 bits (815), Expect = 1.8e-85
Identity = 159/194 (81.96%), Postives = 175/194 (90.21%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLSF+ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSEEPAAAAANI 195
           +L ++E AAA + I
Sbjct: 181 ALAAQEAAAANSAI 194

[Close]

BLAST of Cp4.1LG14g00470 vs. Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.1e-85
Identity = 156/189 (82.54%), Postives = 175/189 (92.59%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DLKHLRAV+ ED Q+ AEKEGLSF+ETSALEA N+EKAFQTIL+EIY IISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 SLNSEEPAA 190
           +L ++E ++
Sbjct: 181 ALAAQEASS 189

[Close]

BLAST of Cp4.1LG14g00470 vs. Swiss-Prot
Match: RAA2D_ARATH (Ras-related protein RABA2d OS=Arabidopsis thaliana GN=RABA2D PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.2e-85
Identity = 161/204 (78.92%), Postives = 180/204 (88.24%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK DL HLR+VA ED Q+ AE EGLSF+ETSALEATNVEKAFQT+L+EIY IISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 SLNSEEPAAAAANIKEVVTHQSVE 205
           +L ++E AAA + I    T  +VE
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVE 204

[Close]

BLAST of Cp4.1LG14g00470 vs. Swiss-Prot
Match: RAA2B_ARATH (Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2 SV=2)

HSP 1 Score: 316.6 bits (810), Expect = 6.8e-85
Identity = 157/188 (83.51%), Postives = 174/188 (92.55%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLSF+ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSEEPA 189
           +L ++E A
Sbjct: 181 ALAAQEAA 188

[Close]

BLAST of Cp4.1LG14g00470 vs. TrEMBL
Match: A0A0A0L6P8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110590 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.1e-100
Identity = 194/196 (98.98%), Postives = 194/196 (98.98%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKE 197
           SLNSEEP AAA NIKE
Sbjct: 181 SLNSEEP-AAANNIKE 195

[Close]

BLAST of Cp4.1LG14g00470 vs. TrEMBL
Match: B9SKB2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0757660 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.8e-96
Identity = 185/196 (94.39%), Postives = 190/196 (96.94%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ YAE+EGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKE 197
           SL SEEP  A ANIKE
Sbjct: 181 SLTSEEP--APANIKE 194

[Close]

BLAST of Cp4.1LG14g00470 vs. TrEMBL
Match: V4MUZ6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10008742mg PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.0e-95
Identity = 186/207 (89.86%), Postives = 196/207 (94.69%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKEVVTHQSVEVVT 208
           S++S++  A A NIKE    Q+++V T
Sbjct: 181 SISSDQATANANNIKE---GQTIDVAT 204

[Close]

BLAST of Cp4.1LG14g00470 vs. TrEMBL
Match: A0A061DWD1_THECC (RAB GTPase 11C OS=Theobroma cacao GN=TCM_006132 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.7e-95
Identity = 184/196 (93.88%), Postives = 191/196 (97.45%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+IGNKTDLKHLRAVATED QSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MMIGNKTDLKHLRAVATEDGQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKE 197
           SL+S+EP  A A+IKE
Sbjct: 181 SLSSDEP--APASIKE 194

[Close]

BLAST of Cp4.1LG14g00470 vs. TrEMBL
Match: A0A067L1Z8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00259 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 5.1e-95
Identity = 184/196 (93.88%), Postives = 190/196 (96.94%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ YAE+EGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKE 197
           SL+SEE   A ANIKE
Sbjct: 181 SLSSEE--QAPANIKE 194

[Close]

BLAST of Cp4.1LG14g00470 vs. TAIR10
Match: AT1G09630.1 (AT1G09630.1 RAB GTPase 11C)

HSP 1 Score: 355.5 bits (911), Expect = 7.5e-98
Identity = 182/196 (92.86%), Postives = 190/196 (96.94%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSEEPAAAAANIKE 197
           S++S++   A ANIKE
Sbjct: 181 SISSDQ-TTANANIKE 195

[Close]

BLAST of Cp4.1LG14g00470 vs. TAIR10
Match: AT3G46830.1 (AT3G46830.1 RAB GTPase homolog A2C)

HSP 1 Score: 318.5 bits (815), Expect = 1.0e-86
Identity = 159/194 (81.96%), Postives = 175/194 (90.21%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLSF+ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSEEPAAAAANI 195
           +L ++E AAA + I
Sbjct: 181 ALAAQEAAAANSAI 194

[Close]

BLAST of Cp4.1LG14g00470 vs. TAIR10
Match: AT5G59150.1 (AT5G59150.1 RAB GTPase homolog A2D)

HSP 1 Score: 317.0 bits (811), Expect = 2.9e-86
Identity = 161/204 (78.92%), Postives = 180/204 (88.24%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK DL HLR+VA ED Q+ AE EGLSF+ETSALEATNVEKAFQT+L+EIY IISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 SLNSEEPAAAAANIKEVVTHQSVE 205
           +L ++E AAA + I    T  +VE
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVE 204

[Close]

BLAST of Cp4.1LG14g00470 vs. TAIR10
Match: AT1G07410.1 (AT1G07410.1 RAB GTPase homolog A2B)

HSP 1 Score: 316.6 bits (810), Expect = 3.8e-86
Identity = 157/188 (83.51%), Postives = 174/188 (92.55%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLSF+ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSEEPA 189
           +L ++E A
Sbjct: 181 ALAAQEAA 188

[Close]

BLAST of Cp4.1LG14g00470 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F)

HSP 1 Score: 288.5 bits (737), Expect = 1.1e-77
Identity = 141/189 (74.60%), Postives = 169/189 (89.42%), Query Frame = 1


Query: 2   ARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
           A R DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V+ + V
Sbjct: 3   AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIV 62

Query: 62  KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIM 121
           KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +TF+NV RWLKELRDH D+NIVIM
Sbjct: 63  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122

Query: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKS 181
            +GNK DL+HLRAV+TEDA+++AE+E   F+ETSALE+ NVE AF  +LS+IYR++S+K+
Sbjct: 123 FVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKA 182

Query: 182 LN-SEEPAA 190
           L+  ++PAA
Sbjct: 183 LDIGDDPAA 191

[Close]

BLAST of Cp4.1LG14g00470 vs. NCBI nr
Match: gi|929101145|ref|XP_014061645.1| (PREDICTED: uncharacterized protein LOC106608300 isoform X1 [Salmo salar])

HSP 1 Score: 375.6 bits (963), Expect = 2.0e-100
Identity = 229/461 (49.67%), Postives = 345/461 (74.84%), Query Frame = 1


Query: 198 VTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQ 257
           V HQ+  +VTHQ+  +VTHQ+  +VTHQ+  +VTHQ+  +VTHQ+  +VTHQ+ ++VTHQ
Sbjct: 3   VAHQTTGMVTHQTTGMVTHQTTGMVTHQTTGMVTHQTTGMVTHQTTGMVTHQTTDMVTHQ 62

Query: 258 SVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEV 317
           +  +VTHQ+ ++VTHQ+  +VTHQ+  +VTHQ+  +VTHQ+ ++VTHQ+  +VTHQ+  +
Sbjct: 63  TTGMVTHQATDMVTHQTTGMVTHQTTGMVTHQTTGMVTHQATDMVTHQTTGMVTHQTTGM 122

Query: 318 VTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQ 377
           VTHQ+ ++VTHQ+  +VTHQ+  +VTHQ+ ++VTHQ+  +VTHQ+  +VTHQ+  +VTHQ
Sbjct: 123 VTHQATDMVTHQTTGMVTHQTTGMVTHQTTDMVTHQTTGMVTHQTTGMVTHQTTGMVTHQ 182

Query: 378 SVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEV 437
           +  +VTHQ+  +VTHQ    V HQ+  +VTHQ+  +VTHQ+ ++VTHQ+  +VTHQ+  +
Sbjct: 183 TTGMVTHQATGMVTHQ----VAHQTTGMVTHQATGMVTHQTTDMVTHQTTGMVTHQTTGM 242

Query: 438 VTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQ 497
           VTHQ+  +VTHQ+  +VTHQ+  +VTHQ+  +VTHQ+  +VTHQ+ ++VTHQ+  +VTHQ
Sbjct: 243 VTHQTTGMVTHQTTGMVTHQTTGMVTHQTTGMVTHQTTGMVTHQTTDMVTHQTTGMVTHQ 302

Query: 498 SVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEV 557
           +  +VTHQ+  +VTHQ+  +VTHQ+  +VTHQ+   VTHQ+  +VTHQ+ ++VTHQ+  +
Sbjct: 303 TTGMVTHQTTGMVTHQTTGMVTHQTTGMVTHQTTGTVTHQATGMVTHQTTDMVTHQTTGM 362

Query: 558 VTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQ 617
           VTHQ+  +VTHQ+  +VTHQ+  +VTHQ+  +VTHQ+  +VTHQ+  +VTHQ+  +VTHQ
Sbjct: 363 VTHQTTGMVTHQTTGMVTHQTTGMVTHQTTGMVTHQTTGMVTHQATGMVTHQTTGMVTHQ 422

Query: 618 SVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQSVEVVTHQS 659
           +   VTHQ+  +VTHQ+  +VTHQ+   VTHQ    V HQ+
Sbjct: 423 TTGTVTHQTTGMVTHQATGMVTHQTTGTVTHQ----VAHQT 455

[Close]

BLAST of Cp4.1LG14g00470 vs. NCBI nr
Match: gi|449431866|ref|XP_004133721.1| (PREDICTED: ras-related protein RABA2a [Cucumis sativus])

HSP 1 Score: 374.4 bits (960), Expect = 4.4e-100
Identity = 194/196 (98.98%), Postives = 194/196 (98.98%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKE 197
           SLNSEEP AAA NIKE
Sbjct: 181 SLNSEEP-AAANNIKE 195

[Close]

BLAST of Cp4.1LG14g00470 vs. NCBI nr
Match: gi|659102651|ref|XP_008452243.1| (PREDICTED: ras-related protein RABA2a [Cucumis melo])

HSP 1 Score: 373.2 bits (957), Expect = 9.8e-100
Identity = 193/196 (98.47%), Postives = 194/196 (98.98%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKE 197
           SLNSEEP +AA NIKE
Sbjct: 181 SLNSEEP-SAANNIKE 195

[Close]

BLAST of Cp4.1LG14g00470 vs. NCBI nr
Match: gi|729353062|ref|XP_010544112.1| (PREDICTED: ras-related protein RABA2a [Tarenaya hassleriana])

HSP 1 Score: 360.5 bits (924), Expect = 6.6e-96
Identity = 182/196 (92.86%), Postives = 192/196 (97.96%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+IGNKTDLKHLRAVATEDA+SYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MMIGNKTDLKHLRAVATEDAESYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKE 197
           S++S++   AAA+IKE
Sbjct: 181 SISSDQTTEAAASIKE 196

[Close]

BLAST of Cp4.1LG14g00470 vs. NCBI nr
Match: gi|255570960|ref|XP_002526431.1| (PREDICTED: ras-related protein RABA2a [Ricinus communis])

HSP 1 Score: 359.8 bits (922), Expect = 1.1e-95
Identity = 185/196 (94.39%), Postives = 190/196 (96.94%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ YAE+EGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPAAAAANIKE 197
           SL SEEP  A ANIKE
Sbjct: 181 SLTSEEP--APANIKE 194

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g00470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA2A_ARATH	1.3e-96	92.86	Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1	[more]
RAA2C_ARATH	1.8e-85	81.96	Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4	[more]
RB2BV_BETVU	3.1e-85	82.54	Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1	[more]
RAA2D_ARATH	5.2e-85	78.92	Ras-related protein RABA2d OS=Arabidopsis thaliana GN=RABA2D PE=2 SV=1	[more]
RAA2B_ARATH	6.8e-85	83.51	Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2 SV=2	[more]

BLAST of Cp4.1LG14g00470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6P8_CUCSA	3.1e-100	98.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110590 PE=4 SV=1	[more]
B9SKB2_RICCO	7.8e-96	94.39	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0757660 PE=4 SV=1	[more]
V4MUZ6_EUTSA	1.0e-95	89.86	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10008742mg PE=4 SV=1	[more]
A0A061DWD1_THECC	1.7e-95	93.88	RAB GTPase 11C OS=Theobroma cacao GN=TCM_006132 PE=4 SV=1	[more]
A0A067L1Z8_JATCU	5.1e-95	93.88	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00259 PE=4 SV=1	[more]

BLAST of Cp4.1LG14g00470 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09630.1	7.5e-98	92.86	RAB GTPase 11C	[more]
AT3G46830.1	1.0e-86	81.96	RAB GTPase homolog A2C	[more]
AT5G59150.1	2.9e-86	78.92	RAB GTPase homolog A2D	[more]
AT1G07410.1	3.8e-86	83.51	RAB GTPase homolog A2B	[more]
AT5G60860.1	1.1e-77	74.60	RAB GTPase homolog A1F	[more]

BLAST of Cp4.1LG14g00470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|929101145\|ref\|XP_014061645.1\|	2.0e-100	49.67	PREDICTED: uncharacterized protein LOC106608300 isoform X1 [Salmo salar]	[more]
gi\|449431866\|ref\|XP_004133721.1\|	4.4e-100	98.98	PREDICTED: ras-related protein RABA2a [Cucumis sativus]	[more]
gi\|659102651\|ref\|XP_008452243.1\|	9.8e-100	98.47	PREDICTED: ras-related protein RABA2a [Cucumis melo]	[more]
gi\|729353062\|ref\|XP_010544112.1\|	6.6e-96	92.86	PREDICTED: ras-related protein RABA2a [Tarenaya hassleriana]	[more]
gi\|255570960\|ref\|XP_002526431.1\|	1.1e-95	94.39	PREDICTED: ras-related protein RABA2a [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0019932	second-messenger-mediated signaling
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0009504	cell plate
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005768	endosome
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g00470.1	Cp4.1LG14g00470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 14..174 score: 1.9
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 11..170 score: 1.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 5..190 score: 6.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..181 score: 3.94
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 151..173 score: 1.8E-40coord: 54..76 score: 1.8E-40coord: 13..34 score: 1.8E-40coord: 36..52 score: 1.8E-40coord: 116..129 score: 1.8
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 4..186 score: 1.6E
None	No IPR available	PANTHER	PTHR24073:SF484	RAS-RELATED PROTEIN RABA2B	coord: 4..186 score: 1.6E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 score: 5.6
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 15..172 score: 7.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 score: 2.7E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..227 score: 1.5
None	No IPR available	PROFILE	PS51419	RAB	coord: 8..225 score: 36

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g00470	Cucsa.114210	Cucumber (Gy14) v1	cgycpeB0266
Cp4.1LG14g00470	CmaCh16G007690	Cucurbita maxima (Rimu)	cmacpeB344
Cp4.1LG14g00470	CmaCh04G008940	Cucurbita maxima (Rimu)	cmacpeB714
Cp4.1LG14g00470	CmoCh04G009600	Cucurbita moschata (Rifu)	cmocpeB667
Cp4.1LG14g00470	CmoCh16G008320	Cucurbita moschata (Rifu)	cmocpeB307
Cp4.1LG14g00470	Cla011813	Watermelon (97103) v1	cpewmB220
Cp4.1LG14g00470	Csa3G110590	Cucumber (Chinese Long) v2	cpecuB215
Cp4.1LG14g00470	MELO3C016491	Melon (DHL92) v3.5.1	cpemeB186
Cp4.1LG14g00470	ClCG10G007150	Watermelon (Charleston Gray)	cpewcgB195
Cp4.1LG14g00470	CSPI03G06360	Wild cucumber (PI 183967)	cpecpiB218
Cp4.1LG14g00470	MELO3C016491.2	Melon (DHL92) v3.6.1	cpemedB235
Cp4.1LG14g00470	CsaV3_3G006490	Cucumber (Chinese Long) v3	cpecucB0258
Cp4.1LG14g00470	Bhi11G000605	Wax gourd	cpewgoB0283
Cp4.1LG14g00470	CsGy3G006470	Cucumber (Gy14) v2	cgybcpeB328
Cp4.1LG14g00470	Carg00011	Silver-seed gourd	carcpeB0937
Cp4.1LG14g00470	Carg25384	Silver-seed gourd	carcpeB0796

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG14g00470	Cp4.1LG01g08520	Cucurbita pepo (Zucchini)	cpecpeB233

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g00470	Bottle gourd (USVL1VR-Ls)	cpelsiB173
Cp4.1LG14g00470	Bottle gourd (USVL1VR-Ls)	cpelsiB176
Cp4.1LG14g00470	Wax gourd	cpewgoB0280