Cp4.1LG01g08520 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g08520
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ras-related protein Rab-11A
Location	Cp4.1LG01 : 4850601 .. 4853130 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACCCCATCGACAAAACACAAAATAAATACCTCATCGACAAAACACAAAATAGATAAACCAAATCAATTCATAACGGAACCCAAACTAAAGGGTAGAGCATTTGACTTATAAAACAAAACTTGTATAACCATTACAAACAAATAGGTGCAACAAATATACATATCCGTTCTATTTGTAGTAAATAAAACGGTAAGAATTCATCTGGAAAAAGAATTCATTTTTGACTCAAAACACATTGTTGGATTAAAATTTAGAAAAAGAGAAAAAAAAAATGTTGGGTTGGGAGGTTCGTCGAAAAAGCCCATATCTAGAAGGGTAGTTTTGGGCATACAAGTTGGTGCCAATCCCAGTATTTGAAGTCGGCTGTCTCTCCGTATTGTCTACATTTTCGAAGTGGGGCACCCGATTTGGGAGGGACAATTTCTTCAATTTTGCTTTCCGAGATTTCGGAAAGCTAAATCTTCAGAACCAGGAATCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAGAGAGACCACCGAGATAATATGGCCCGGAGACCCGACGATGACTACGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCCGGCGTTGGAAAATCCAACCTTCTTTCCCGGTTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTCTCTCTCTCAATTTTCTCTCTCATTTCGGTATTTATATCTACGTTCGTTGTATGTTTGTGTGCTTTACATTCTCGATCTATGTAAAAATTCGCGGGAACGCGAATTTTTTTTTGGAGAATTTTTTGTTGTACTTCAAGTAATGATCTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTAAAACTGGCGGTTTTTATTTGAATTGAGATTGTGCATCTTCGCTTGCGGATCTGCGTTCTCAATTGGTTGTTCTGGTAATTTTCGTTTTAATTTAGGGGAATGCGGGAAATTGGTCGTCTTTTTACTGCTTTGGATTAGGACAACGAATTGAGAAAAATGTCTATGGATTTGTTTAGGTTTATAACTTTTGATTGAAGTTATTCAGATTCTGATCTGCTATGGGCTAGAGATTTCATCCTAACTTTTAATGGAGATACATCTGCAGATCATGATTGGTTGTTTTTATGCCGATTAATTTCCCACAAAACCTTAACGCCAAATATGAATCTGAATTAACGACTCCTTTTCTGGTAATCCAATTATTATCTTAGTTCTTATACAAATTTTGATTATGCAAATTTACAGTTTAAACCATTCGAGTGTTCTATAAAGGACAAGCATTTTACAAATTGTTAAACAATGAAGAATCATATACAATTCTTCTACCCGCAACACCTGATTTACACTGCAGTATGAGGTCATTTAAATCTCAGTTTCTTGGACTATGGCTGGTAGATAGAATTTTTTATTTAGTTTGTGTCCTGTTACACATATAGATGTTTTGATAATAGATTTTGGAACTTCTTGGATCAATGTCGTCTTCAAATGGCTATGTGATATTAGTGTCACATTTGTTGAACTGAAAGAAAATGTTCTCTTTTTTCTTTTTCTACTGCGCTTTGACTATCAAAGTTACCAAGAAAAGAAATGCTACATACTTTATATTAGGTTGAGGGAAGAACCGTGAAAGCTCAGATATGGGACACAGCCGGTCAAGAGCGTTACAGAGCAATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCCCTTCTAGTATACGATGTAACGAAACCGATGACATTCGACAATGTAAACCGTTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGTAACAAGACCGATCTGAAACACCTCCGAGCAGTGGCGACAGAAGACGCACAGAGCTACGCCGAGAAAGAAGGGCTGTCACTCATTGAAACTTCTGCTCTTGAAGCAACAAACGTGGAGAAGGCTTTCCAAACCATTCTCTCAGAGATATATAGGATAATCAGTAAGAAGTCCCTCAATTCGGATGAGCCTGCTGCTGCTGCTAACATCAAGGAAGGAAAAAGCATTGTGGTTGGTGAATCAGAGGCCAATTCAAAGAAGGCTTGTTGCTCCTCTTCTTAAGTTCAGAAAGATATCCCCACAATTTTTTGTAACTCTCCTCTCTCTCTCTCCCTCTGTTCTTGGTCATCTGCTTACGCATATCTTTCTAGTTACCAACTCTATTCTGTTATTCTTGTTTGCTTGGATTTTGTTGGTGTATAATTTTCATATAATTTATATTTTACTTAGATTCTTTTTCAAGAGATCATTGAGATCTCATGTCAGAAACACTATTGAGCGGTTCATTTCAGAGTTTGTCTGTTTTTATGGAATCTCTATGTTGGAGAATCAAATGTGAATGTCTTATTTTAATATCCGTGAGGCTTATGTGTATCCAACTAGTTTTGTTCTTAAGAACTGTTGATTTTAAAGTGGCTATTGACCATATTCTT

mRNA sequence

ATACCCCATCGACAAAACACAAAATAAATACCTCATCGACAAAACACAAAATAGATAAACCAAATCAATTCATAACGGAACCCAAACTAAAGGGTAGAGCATTTGACTTATAAAACAAAACTTGTATAACCATTACAAACAAATAGGTGCAACAAATATACATATCCGTTCTATTTGTAGTAAATAAAACGGTAAGAATTCATCTGGAAAAAGAATTCATTTTTGACTCAAAACACATTGTTGGATTAAAATTTAGAAAAAGAGAAAAAAAAAATGTTGGGTTGGGAGGTTCGTCGAAAAAGCCCATATCTAGAAGGGTAGTTTTGGGCATACAAGTTGGTGCCAATCCCAGTATTTGAAGTCGGCTGTCTCTCCGTATTGTCTACATTTTCGAAGTGGGGCACCCGATTTGGGAGGGACAATTTCTTCAATTTTGCTTTCCGAGATTTCGGAAAGCTAAATCTTCAGAACCAGGAATCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAGAGAGACCACCGAGATAATATGGCCCGGAGACCCGACGATGACTACGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCCGGCGTTGGAAAATCCAACCTTCTTTCCCGGTTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACCGTGAAAGCTCAGATATGGGACACAGCCGGTCAAGAGCGTTACAGAGCAATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCCCTTCTAGTATACGATGTAACGAAACCGATGACATTCGACAATGTAAACCGTTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGTAACAAGACCGATCTGAAACACCTCCGAGCAGTGGCGACAGAAGACGCACAGAGCTACGCCGAGAAAGAAGGGCTGTCACTCATTGAAACTTCTGCTCTTGAAGCAACAAACGTGGAGAAGGCTTTCCAAACCATTCTCTCAGAGATATATAGGATAATCAGTAAGAAGTCCCTCAATTCGGATGAGCCTGCTGCTGCTGCTAACATCAAGGAAGGAAAAAGCATTGTGGTTGGTGAATCAGAGGCCAATTCAAAGAAGGCTTGTTGCTCCTCTTCTTAAGTTCAGAAAGATATCCCCACAATTTTTTGTAACTCTCCTCTCTCTCTCTCCCTCTGTTCTTGGTCATCTGCTTACGCATATCTTTCTAGTTACCAACTCTATTCTGTTATTCTTGTTTGCTTGGATTTTGTTGGTGTATAATTTTCATATAATTTATATTTTACTTAGATTCTTTTTCAAGAGATCATTGAGATCTCATGTCAGAAACACTATTGAGCGGTTCATTTCAGAGTTTGTCTGTTTTTATGGAATCTCTATGTTGGAGAATCAAATGTGAATGTCTTATTTTAATATCCGTGAGGCTTATGTGTATCCAACTAGTTTTGTTCTTAAGAACTGTTGATTTTAAAGTGGCTATTGACCATATTCTT

Coding sequence (CDS)

ATGGCCCGGAGACCCGACGATGACTACGATTACCTCTTCAAAGTTGTGCTAATCGGCGATTCCGGCGTTGGAAAATCCAACCTTCTTTCCCGGTTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTTGAGGGAAGAACCGTGAAAGCTCAGATATGGGACACAGCCGGTCAAGAGCGTTACAGAGCAATAACCAGTGCTTACTATAGGGGTGCCCTTGGAGCCCTTCTAGTATACGATGTAACGAAACCGATGACATTCGACAATGTAAACCGTTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGTAACAAGACCGATCTGAAACACCTCCGAGCAGTGGCGACAGAAGACGCACAGAGCTACGCCGAGAAAGAAGGGCTGTCACTCATTGAAACTTCTGCTCTTGAAGCAACAAACGTGGAGAAGGCTTTCCAAACCATTCTCTCAGAGATATATAGGATAATCAGTAAGAAGTCCCTCAATTCGGATGAGCCTGCTGCTGCTGCTAACATCAAGGAAGGAAAAAGCATTGTGGTTGGTGAATCAGAGGCCAATTCAAAGAAGGCTTGTTGCTCCTCTTCTTAA

Protein sequence

MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKKSLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS

Homology

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BLAST of Cp4.1LG01g08520 vs. Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.7e-103
Identity = 194/217 (89.40%), Postives = 206/217 (94.93%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLS IETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSDEPAAAANIKEGKSI-VVGESEANSKKACCSSS 217
           S++SD+  A ANIKEG++I V   SE+N+KK CCSSS
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of Cp4.1LG01g08520 vs. Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.0e-88
Identity = 165/216 (76.39%), Postives = 192/216 (88.89%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DLKHLRAV+ ED Q+ AEKEGLS +ETSALEA N+EKAFQTIL+EIY IISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 SLNSDEPAAAANIK-EGKSIVVGESEANSKKACCSS 216
           +L + E  A++N+  +G +I V ++ AN +++CCS+
Sbjct: 181 ALAAQE--ASSNLPGQGTTINVADASANQRRSCCST 214

[Close]

BLAST of Cp4.1LG01g08520 vs. Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 3.4e-88
Identity = 162/216 (75.00%), Postives = 189/216 (87.50%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLRAV+ +D  + +EKEGLS +ETSALEATN+EKAFQTIL+EIY I+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 181 SLNSDEPAAAANIK-EGKSIVVGESEANSKKACCSS 216
           +L + E  A A++  +G +I V ++  N+KK CCS+
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGNTKKGCCST 216

[Close]

BLAST of Cp4.1LG01g08520 vs. Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4)

HSP 1 Score: 325.1 bits (832), Expect = 5.8e-88
Identity = 167/217 (76.96%), Postives = 187/217 (86.18%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLS +ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSDEPAAA--ANIKEGKSIVVGESEANSKKACCSS 216
           +L + E AAA  A   +G +I V ++   +K+ACCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of Cp4.1LG01g08520 vs. Swiss-Prot
Match: RAA2B_ARATH (Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2 SV=2)

HSP 1 Score: 324.7 bits (831), Expect = 7.6e-88
Identity = 166/216 (76.85%), Postives = 190/216 (87.96%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLS +ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSDEPAAAANIK-EGKSIVVGESEANSKKACCSS 216
           +L + E  AA N+  +G +I + +S A ++K CCS+
Sbjct: 181 ALAAQE--AAGNLPGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of Cp4.1LG01g08520 vs. TrEMBL
Match: A0A0A0L6P8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110590 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 4.5e-111
Identity = 210/216 (97.22%), Postives = 214/216 (99.07%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLS IETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS 217
           SLNS+EPAAA NIKEGK+IVVGESEAN+KKACCSSS
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Cp4.1LG01g08520 vs. TrEMBL
Match: A0A061DWD1_THECC (RAB GTPase 11C OS=Theobroma cacao GN=TCM_006132 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.4e-104
Identity = 199/216 (92.13%), Postives = 209/216 (96.76%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+IGNKTDLKHLRAVATED QSYAEKEGLS IETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MMIGNKTDLKHLRAVATEDGQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS 217
           SL+SDEP A A+IKEGK+I+VG  EAN+KKACCSSS
Sbjct: 181 SLSSDEP-APASIKEGKTIIVGAQEANTKKACCSSS 215

[Close]

BLAST of Cp4.1LG01g08520 vs. TrEMBL
Match: A0A059AU03_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02784 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.8e-104
Identity = 202/216 (93.52%), Postives = 209/216 (96.76%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARR +++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLS IETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS 217
            L+S E AA ANIKEGK+IVVGESEAN+KKACCSSS
Sbjct: 181 PLSS-EDAAPANIKEGKTIVVGESEANTKKACCSSS 215

[Close]

BLAST of Cp4.1LG01g08520 vs. TrEMBL
Match: B9SKB2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0757660 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 9.0e-104
Identity = 199/216 (92.13%), Postives = 207/216 (95.83%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ YAE+EGLS IETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS 217
           SL S+EP A ANIKEGK IVVG SEAN+KK CCSSS
Sbjct: 181 SLTSEEP-APANIKEGKMIVVGGSEANTKKPCCSSS 215

[Close]

BLAST of Cp4.1LG01g08520 vs. TrEMBL
Match: A0A067L1Z8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00259 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.7e-102
Identity = 197/216 (91.20%), Postives = 207/216 (95.83%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ YAE+EGLS IETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS 217
           SL+S+E  A ANIKEGK+IVVG SEAN K+ CCSSS
Sbjct: 181 SLSSEE-QAPANIKEGKTIVVGGSEANVKRPCCSSS 215

[Close]

BLAST of Cp4.1LG01g08520 vs. TAIR10
Match: AT1G09630.1 (AT1G09630.1 RAB GTPase 11C)

HSP 1 Score: 376.7 bits (966), Expect = 9.5e-105
Identity = 194/217 (89.40%), Postives = 206/217 (94.93%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLS IETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSDEPAAAANIKEGKSI-VVGESEANSKKACCSSS 217
           S++SD+  A ANIKEG++I V   SE+N+KK CCSSS
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of Cp4.1LG01g08520 vs. TAIR10
Match: AT3G46830.1 (AT3G46830.1 RAB GTPase homolog A2C)

HSP 1 Score: 325.1 bits (832), Expect = 3.3e-89
Identity = 167/217 (76.96%), Postives = 187/217 (86.18%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLS +ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSDEPAAA--ANIKEGKSIVVGESEANSKKACCSS 216
           +L + E AAA  A   +G +I V ++   +K+ACCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of Cp4.1LG01g08520 vs. TAIR10
Match: AT1G07410.1 (AT1G07410.1 RAB GTPase homolog A2B)

HSP 1 Score: 324.7 bits (831), Expect = 4.3e-89
Identity = 166/216 (76.85%), Postives = 190/216 (87.96%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLS +ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSDEPAAAANIK-EGKSIVVGESEANSKKACCSS 216
           +L + E  AA N+  +G +I + +S A ++K CCS+
Sbjct: 181 ALAAQE--AAGNLPGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of Cp4.1LG01g08520 vs. TAIR10
Match: AT5G59150.1 (AT5G59150.1 RAB GTPase homolog A2D)

HSP 1 Score: 319.7 bits (818), Expect = 1.4e-87
Identity = 164/217 (75.58%), Postives = 186/217 (85.71%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK DL HLR+VA ED Q+ AE EGLS +ETSALEATNVEKAFQT+L+EIY IISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 SLNSDEPAAA--ANIKEGKSIVVGESEANSKKACCSS 216
           +L + E AAA  A   +G +I V ++    K+ CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSGAGKRGCCST 217

[Close]

BLAST of Cp4.1LG01g08520 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F)

HSP 1 Score: 293.1 bits (749), Expect = 1.4e-79
Identity = 150/218 (68.81%), Postives = 183/218 (83.94%), Query Frame = 1


Query: 2   ARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
           A R DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V+ + V
Sbjct: 3   AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIV 62

Query: 62  KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVIM 121
           KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +TF+NV RWLKELRDH D+NIVIM
Sbjct: 63  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122

Query: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKKS 181
            +GNK DL+HLRAV+TEDA+++AE+E    +ETSALE+ NVE AF  +LS+IYR++S+K+
Sbjct: 123 FVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKA 182

Query: 182 LN-SDEPAAAANIKEGKSIVVGESE---ANSKKACCSS 216
           L+  D+PAA   + +G++I VG  +   A  K  CCS+
Sbjct: 183 LDIGDDPAA---LPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of Cp4.1LG01g08520 vs. NCBI nr
Match: gi|449431866|ref|XP_004133721.1| (PREDICTED: ras-related protein RABA2a [Cucumis sativus])

HSP 1 Score: 408.7 bits (1049), Expect = 6.4e-111
Identity = 210/216 (97.22%), Postives = 214/216 (99.07%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLS IETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS 217
           SLNS+EPAAA NIKEGK+IVVGESEAN+KKACCSSS
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Cp4.1LG01g08520 vs. NCBI nr
Match: gi|659102651|ref|XP_008452243.1| (PREDICTED: ras-related protein RABA2a [Cucumis melo])

HSP 1 Score: 407.5 bits (1046), Expect = 1.4e-110
Identity = 209/216 (96.76%), Postives = 214/216 (99.07%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLS IETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS 217
           SLNS+EP+AA NIKEGK+IVVGESEAN+KKACCSSS
Sbjct: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Cp4.1LG01g08520 vs. NCBI nr
Match: gi|590681777|ref|XP_007041174.1| (RAB GTPase 11C [Theobroma cacao])

HSP 1 Score: 387.1 bits (993), Expect = 2.0e-104
Identity = 199/216 (92.13%), Postives = 209/216 (96.76%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+IGNKTDLKHLRAVATED QSYAEKEGLS IETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MMIGNKTDLKHLRAVATEDGQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS 217
           SL+SDEP A A+IKEGK+I+VG  EAN+KKACCSSS
Sbjct: 181 SLSSDEP-APASIKEGKTIIVGAQEANTKKACCSSS 215

[Close]

BLAST of Cp4.1LG01g08520 vs. NCBI nr
Match: gi|702469289|ref|XP_010030204.1| (PREDICTED: ras-related protein RABA2a [Eucalyptus grandis])

HSP 1 Score: 386.7 bits (992), Expect = 2.6e-104
Identity = 202/216 (93.52%), Postives = 209/216 (96.76%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARR +++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLS IETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS 217
            L+S E AA ANIKEGK+IVVGESEAN+KKACCSSS
Sbjct: 181 PLSS-EDAAPANIKEGKTIVVGESEANTKKACCSSS 215

[Close]

BLAST of Cp4.1LG01g08520 vs. NCBI nr
Match: gi|255570960|ref|XP_002526431.1| (PREDICTED: ras-related protein RABA2a [Ricinus communis])

HSP 1 Score: 384.4 bits (986), Expect = 1.3e-103
Identity = 199/216 (92.13%), Postives = 207/216 (95.83%), Query Frame = 1


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NV+RWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQ YAE+EGLS IETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS 217
           SL S+EP A ANIKEGK IVVG SEAN+KK CCSSS
Sbjct: 181 SLTSEEP-APANIKEGKMIVVGGSEANTKKPCCSSS 215

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g08520 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA2A_ARATH	1.7e-103	89.40	Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1	[more]
RB2BV_BETVU	2.0e-88	76.39	Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1	[more]
RB11C_LOTJA	3.4e-88	75.00	Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1	[more]
RAA2C_ARATH	5.8e-88	76.96	Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4	[more]
RAA2B_ARATH	7.6e-88	76.85	Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2 SV=2	[more]

BLAST of Cp4.1LG01g08520 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6P8_CUCSA	4.5e-111	97.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110590 PE=4 SV=1	[more]
A0A061DWD1_THECC	1.4e-104	92.13	RAB GTPase 11C OS=Theobroma cacao GN=TCM_006132 PE=4 SV=1	[more]
A0A059AU03_EUCGR	1.8e-104	93.52	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02784 PE=4 SV=1	[more]
B9SKB2_RICCO	9.0e-104	92.13	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0757660 PE=4 SV=1	[more]
A0A067L1Z8_JATCU	1.7e-102	91.20	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00259 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g08520 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09630.1	9.5e-105	89.40	RAB GTPase 11C	[more]
AT3G46830.1	3.3e-89	76.96	RAB GTPase homolog A2C	[more]
AT1G07410.1	4.3e-89	76.85	RAB GTPase homolog A2B	[more]
AT5G59150.1	1.4e-87	75.58	RAB GTPase homolog A2D	[more]
AT5G60860.1	1.4e-79	68.81	RAB GTPase homolog A1F	[more]

BLAST of Cp4.1LG01g08520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449431866\|ref\|XP_004133721.1\|	6.4e-111	97.22	PREDICTED: ras-related protein RABA2a [Cucumis sativus]	[more]
gi\|659102651\|ref\|XP_008452243.1\|	1.4e-110	96.76	PREDICTED: ras-related protein RABA2a [Cucumis melo]	[more]
gi\|590681777\|ref\|XP_007041174.1\|	2.0e-104	92.13	RAB GTPase 11C [Theobroma cacao]	[more]
gi\|702469289\|ref\|XP_010030204.1\|	2.6e-104	93.52	PREDICTED: ras-related protein RABA2a [Eucalyptus grandis]	[more]
gi\|255570960\|ref\|XP_002526431.1\|	1.3e-103	92.13	PREDICTED: ras-related protein RABA2a [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0019932	second-messenger-mediated signaling
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0009504	cell plate
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005768	endosome
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g08520.1	Cp4.1LG01g08520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 14..174 score: 1.8
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 11..170 score: 1.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 5..213 score: 8.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..181 score: 1.29
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 54..76 score: 2.3E-41coord: 116..129 score: 2.3E-41coord: 36..52 score: 2.3E-41coord: 13..34 score: 2.3E-41coord: 151..173 score: 2.3
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 4..215 score: 7.9E
None	No IPR available	PANTHER	PTHR24073:SF484	RAS-RELATED PROTEIN RABA2B	coord: 4..215 score: 7.9E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 score: 9.9
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 15..172 score: 9.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 score: 7.7E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..212 score: 2.
None	No IPR available	PROFILE	PS51419	RAB	coord: 8..213 score: 36

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g08520	Cucsa.114210	Cucumber (Gy14) v1	cgycpeB0267
Cp4.1LG01g08520	CmaCh16G007690	Cucurbita maxima (Rimu)	cmacpeB350
Cp4.1LG01g08520	CmaCh04G008940	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g08520	CmoCh04G009600	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g08520	CmoCh16G008320	Cucurbita moschata (Rifu)	cmocpeB312
Cp4.1LG01g08520	Cla011813	Watermelon (97103) v1	cpewmB405
Cp4.1LG01g08520	Csa3G110590	Cucumber (Chinese Long) v2	cpecuB393
Cp4.1LG01g08520	MELO3C016491	Melon (DHL92) v3.5.1	cpemeB409
Cp4.1LG01g08520	ClCG10G007150	Watermelon (Charleston Gray)	cpewcgB349
Cp4.1LG01g08520	CSPI03G06360	Wild cucumber (PI 183967)	cpecpiB392
Cp4.1LG01g08520	MELO3C016491.2	Melon (DHL92) v3.6.1	cpemedB482
Cp4.1LG01g08520	CsaV3_3G006490	Cucumber (Chinese Long) v3	cpecucB0491
Cp4.1LG01g08520	Bhi11G000605	Wax gourd	cpewgoB0489
Cp4.1LG01g08520	CsGy3G006470	Cucumber (Gy14) v2	cgybcpeB369
Cp4.1LG01g08520	Carg00011	Silver-seed gourd	carcpeB0938
Cp4.1LG01g08520	Carg25384	Silver-seed gourd	carcpeB0797

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g08520	Cp4.1LG14g00470	Cucurbita pepo (Zucchini)	cpecpeB233

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g08520	Bottle gourd (USVL1VR-Ls)	cpelsiB366
Cp4.1LG01g08520	Bottle gourd (USVL1VR-Ls)	cpelsiB370
Cp4.1LG01g08520	Wax gourd	cpewgoB0485