CsaV3_3G020900 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCTTGGGAAACGTCTGATTGGAGATATCGACACCGATTTTCTAATGGAGTCGCATGTGAGTCGAATTTTAGCCGAGCTAAGGTTCGAAACAATGAGAACTCCAAATGCAAACTCTGCATCGGTGGTCAATTGTGAACGGCCGCCACGCTATGATAGTTGCCTCGGCGAAGCAAGGGATAATCCTCCATCGGAGAACTGTGACCCTTACAACCGCGCCAATCCCTGTTAAGTTATGAGAAAAAAAGAATAAAAAGGTCTGACAACTTCATTTTACATTAAGAATAAATGTAATCAACACCCATATACAG CTTGGGAAACGTCTGATTGGAGATATCGACACCGATTTTCTAATGGAGTCGCATGTGAGTCGAATTTTAGCCGAGCTAAGGTTCGAAACAATGAGAACTCCAAATGCAAACTCTGCATCGGTGGTCAATTGTGAACGGCCGCCACGCTATGATAGTTGCCTCGGCGAAGCAAGGGATAATCCTCCATCGGAGAACTGTGACCCTTACAACCGCGCCAATCCCTGTTAA CTTGGGAAACGTCTGATTGGAGATATCGACACCGATTTTCTAATGGAGTCGCATGTGAGTCGAATTTTAGCCGAGCTAAGGTTCGAAACAATGAGAACTCCAAATGCAAACTCTGCATCGGTGGTCAATTGTGAACGGCCGCCACGCTATGATAGTTGCCTCGGCGAAGCAAGGGATAATCCTCCATCGGAGAACTGTGACCCTTACAACCGCGCCAATCCCTGTTAA LGKRLIGDIDTDFLMESHVSRILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC
BLAST of CsaV3_3G020900 vs. NCBI nr
Match: KGN57779.1 (hypothetical protein Csa_3G298070 [Cucumis sativus]) HSP 1 Score: 161.0 bits (406), Expect = 1.6e-36 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of CsaV3_3G020900 vs. NCBI nr
Match: XP_022998176.1 (uncharacterized protein LOC111492901 [Cucurbita maxima]) HSP 1 Score: 130.2 bits (326), Expect = 3.0e-27 Identity = 61/78 (78.21%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of CsaV3_3G020900 vs. NCBI nr
Match: XP_022948337.1 (uncharacterized protein LOC111452043 [Cucurbita moschata]) HSP 1 Score: 128.6 bits (322), Expect = 8.8e-27 Identity = 60/78 (76.92%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of CsaV3_3G020900 vs. NCBI nr
Match: XP_022143399.1 (uncharacterized protein LOC111013278 [Momordica charantia]) HSP 1 Score: 112.1 bits (279), Expect = 8.5e-22 Identity = 55/76 (72.37%), Postives = 63/76 (82.89%), Query Frame = 0
BLAST of CsaV3_3G020900 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima]) HSP 1 Score: 99.0 bits (245), Expect = 7.4e-18 Identity = 49/77 (63.64%), Postives = 59/77 (76.62%), Query Frame = 0
BLAST of CsaV3_3G020900 vs. TrEMBL
Match: tr|A0A0A0L9X5|A0A0A0L9X5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.1e-36 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of CsaV3_3G020900 vs. TrEMBL
Match: tr|A0A0A0LCJ4|A0A0A0LCJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 7.9e-16 Identity = 44/77 (57.14%), Postives = 56/77 (72.73%), Query Frame = 0
BLAST of CsaV3_3G020900 vs. TrEMBL
Match: tr|A0A0A0L711|A0A0A0L711_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 7.3e-14 Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of CsaV3_3G020900 vs. TrEMBL
Match: tr|A0A0A0KVZ2|A0A0A0KVZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.2e-11 Identity = 41/76 (53.95%), Postives = 51/76 (67.11%), Query Frame = 0
BLAST of CsaV3_3G020900 vs. TrEMBL
Match: tr|A0A0A0KW62|A0A0A0KW62_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 9.3e-09 Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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