MELO3C020218 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C020218
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionFriend leukemia integration 1 transcription factor
Locationchr6 : 15340866 .. 15341632 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGTGATAGATCACCAAACAGAGACGCCCATAGTTTTAGTCTTCCTCCTTTCCCATAAAACCCAATCGTATCTGTCCGCCTAAAAAGAATCAAGGACGTCAATGGGTGCGTCGGCGACGATGATACCGGCCGCCGTAGTGACGATGATCCTGCTGCTCAATATTCCAAGTAGTTGCGAAGCTCTTACAACTTTCGAACCACTTCTCAGCAACCACACTTCATGTAAGTTTTGAAAAACTAGACTAGAGTCTTCGTTTTTGTTTATAATAATTCTTTTTATGCTTTGATAATTGTTGATTTTGGAGCGGTTTGACTGAAGCAGATGGCGAACAATTGATGGTCGGAGAAGAAGATATGGACATGGAATTTATAATGGAGTCACACATAAGCCGGATTCTAGCGTCATCTCAAAACTTCCAAACAACCTCCACCGTAGACGCTAACAAAGCTTCTGGAGGCGGTTGTGGCCGACCACCGCGCTACGACAGTTGTCTCGGCCAGAAAAGAAATAATCCCCCGCCCCCAAACTGTGGCACCTACAATCGCGCAAATCCCTGTTAGATAATTTTAATCTTCACCTTCTCTATTATTCACCTTTTTTTTTTGTTCTTTCTCTTACCATTTATGATTATACAATTTCTCACTCAAATCTTTACCCTTAAATCTTAATAATGCAAAATATTGTACTTCCTCAATTCTCTCATCTACATTAAAAATTGGGTTTCCACTTTCCAGATAAAAATATAGTCATATATATATATATATA

mRNA sequence

AAGGTGATAGATCACCAAACAGAGACGCCCATAGTTTTAGTCTTCCTCCTTTCCCATAAAACCCAATCGTATCTGTCCGCCTAAAAAGAATCAAGGACGTCAATGGGTGCGTCGGCGACGATGATACCGGCCGCCGTAGTGACGATGATCCTGCTGCTCAATATTCCAAGTAGTTGCGAAGCTCTTACAACTTTCGAACCACTTCTCAGCAACCACACTTCATATGGCGAACAATTGATGGTCGGAGAAGAAGATATGGACATGGAATTTATAATGGAGTCACACATAAGCCGGATTCTAGCGTCATCTCAAAACTTCCAAACAACCTCCACCGTAGACGCTAACAAAGCTTCTGGAGGCGGTTGTGGCCGACCACCGCGCTACGACAGTTGTCTCGGCCAGAAAAGAAATAATCCCCCGCCCCCAAACTGTGGCACCTACAATCGCGCAAATCCCTGTTAGATAATTTTAATCTTCACCTTCTCTATTATTCACCTTTTTTTTTTGTTCTTTCTCTTACCATTTATGATTATACAATTTCTCACTCAAATCTTTACCCTTAAATCTTAATAATGCAAAATATTGTACTTCCTCAATTCTCTCATCTACATTAAAAATTGGGTTTCCACTTTCCAGATAAAAATATAGTCATATATATATATATATA

Coding sequence (CDS)

ATGGGTGCGTCGGCGACGATGATACCGGCCGCCGTAGTGACGATGATCCTGCTGCTCAATATTCCAAGTAGTTGCGAAGCTCTTACAACTTTCGAACCACTTCTCAGCAACCACACTTCATATGGCGAACAATTGATGGTCGGAGAAGAAGATATGGACATGGAATTTATAATGGAGTCACACATAAGCCGGATTCTAGCGTCATCTCAAAACTTCCAAACAACCTCCACCGTAGACGCTAACAAAGCTTCTGGAGGCGGTTGTGGCCGACCACCGCGCTACGACAGTTGTCTCGGCCAGAAAAGAAATAATCCCCCGCCCCCAAACTGTGGCACCTACAATCGCGCAAATCCCTGTTAG

Protein sequence

MGASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYGEQLMVGEEDMDMEFIMESHISRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC*
Homology
[Close]
BLAST of MELO3C020218 vs. TrEMBL
Match: A0A0A0LCJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.0e-53
Identity = 99/119 (83.19%), Postives = 112/119 (94.12%), Query Frame = 1 

Query: 1   MGASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYGEQLMVGEEDMDMEFIMES 60
           MGASA MIPAAVVTMILLL+IPSSC+ALTTF+PLLSNH+SYG +LM+GEEDM++EF+MES
Sbjct: 1   MGASALMIPAAVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60

Query: 61  HISRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 120
           HISRILASS+N+QT ST +ANKASGGGC RPPRYDSCLG+KRNNPPPPNC  YNRANPC
Sbjct: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

[Close]
BLAST of MELO3C020218 vs. TrEMBL
Match: A0A0A0L711_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-29
Identity = 71/119 (59.66%), Postives = 91/119 (76.47%), Query Frame = 1 

Query: 3   ASATMIPAAVVTMILLLNIPSSC-EALTTFEPLLSNHTSYG-EQLMVGEEDMDMEFIMES 62
           A A MIPAA+  M+++L IP++C  ALT+F+P L+NHTS G  + MV EED+   F+MES
Sbjct: 4   APALMIPAAMAMMLMML-IPTACGGALTSFKP-LNNHTSGGLVKYMVEEEDIKSNFVMES 63

Query: 63  HISRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 120
           HISR+LA SQ+F+T+ST +A + S G C RPPRYDSCLG KRN PPP NC T+NR +PC
Sbjct: 64  HISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]
BLAST of MELO3C020218 vs. TrEMBL
Match: A0A0A0L9X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298070 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-20
Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 1 

Query: 3   ASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYGEQLMVGEEDMDMEFIMESHI 62
           A+AT+     + ++ LL +   C+A    +P+ +  +  G++L+    D+D +F+MESH+
Sbjct: 2   AAATLSIRTTLAIVTLLLVAVGCDAFIASKPVFNLSSDLGKRLI---GDIDTDFLMESHV 61

Query: 63  SRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 120
           SRILA  + F+T  T +AN AS   C RPPRYDSCLG+ R+NPP  NC  YNRANPC
Sbjct: 62  SRILAELR-FETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

[Close]
BLAST of MELO3C020218 vs. TrEMBL
Match: A0A0A0KVZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G131140 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.9e-20
Identity = 52/117 (44.44%), Postives = 67/117 (57.26%), Query Frame = 1 

Query: 3   ASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYGEQLMVGEEDMDMEFIMESHI 62
           A+   IP   + ++ LL  P+ C   TT     S      E  +VG+E +D EF+ME+  
Sbjct: 2   ATTFSIPTMAILILTLLFNPTRCN--TTVNETTSEWCYGSENCLVGDESLDSEFLMETET 61

Query: 63  SRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 120
           SR+L   QN QT  T+D N+ S   CGRPPRYDSC G++R  P P NC   NRANPC
Sbjct: 62  SRMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

[Close]
BLAST of MELO3C020218 vs. TrEMBL
Match: A0A0A0KW62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G130630 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.1e-13
Identity = 51/120 (42.50%), Postives = 62/120 (51.67%), Query Frame = 1 

Query: 1   MGASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYGEQLMVGEEDMDMEFIMES 60
           M A+ TM   A +  ILLLN   S   +   E    + T   E  +VG+ +   EF+M +
Sbjct: 9   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGL-ENCLVGDLNSHSEFLMLT 68

Query: 61  HISRILASS-QNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 120
             S +L      FQT    DANK S   C RPPRYDSCLG KR+ P P  C T NR NPC
Sbjct: 69  ESSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRSIPNPEPCSTLNRVNPC 127

[Close]
BLAST of MELO3C020218 vs. NCBI nr
Match: gi|700202648|gb|KGN57781.1| (hypothetical protein Csa_3G298580 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-52
Identity = 99/119 (83.19%), Postives = 112/119 (94.12%), Query Frame = 1 

Query: 1   MGASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYGEQLMVGEEDMDMEFIMES 60
           MGASA MIPAAVVTMILLL+IPSSC+ALTTF+PLLSNH+SYG +LM+GEEDM++EF+MES
Sbjct: 1   MGASALMIPAAVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60

Query: 61  HISRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 120
           HISRILASS+N+QT ST +ANKASGGGC RPPRYDSCLG+KRNNPPPPNC  YNRANPC
Sbjct: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

[Close]
BLAST of MELO3C020218 vs. NCBI nr
Match: gi|778680757|ref|XP_011651393.1| (PREDICTED: uncharacterized protein LOC105434882 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-29
Identity = 71/119 (59.66%), Postives = 91/119 (76.47%), Query Frame = 1 

Query: 3   ASATMIPAAVVTMILLLNIPSSC-EALTTFEPLLSNHTSYG-EQLMVGEEDMDMEFIMES 62
           A A MIPAA+  M+++L IP++C  ALT+F+P L+NHTS G  + MV EED+   F+MES
Sbjct: 4   APALMIPAAMAMMLMML-IPTACGGALTSFKP-LNNHTSGGLVKYMVEEEDIKSNFVMES 63

Query: 63  HISRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 120
           HISR+LA SQ+F+T+ST +A + S G C RPPRYDSCLG KRN PPP NC T+NR +PC
Sbjct: 64  HISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]
BLAST of MELO3C020218 vs. NCBI nr
Match: gi|659114334|ref|XP_008457017.1| (PREDICTED: uncharacterized protein LOC103496797 [Cucumis melo])

HSP 1 Score: 135.2 bits (339), Expect = 7.6e-29
Identity = 72/120 (60.00%), Postives = 85/120 (70.83%), Query Frame = 1 

Query: 3   ASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYG--EQLMVGEEDMDMEFIMES 62
           A A MIPAAV  MI++L IP++C    TF   L+NHTS G     MV EED    F+MES
Sbjct: 4   APAVMIPAAVAMMIMML-IPTACGGAFTFFKPLNNHTSGGLVRYNMVEEEDTKSNFVMES 63

Query: 63  HISRILA-SSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 120
           HISR+LA SSQ+F+T+ST +A + S G C RPPRYDSCLG KRN PPP NC TYNR +PC
Sbjct: 64  HISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHPC 122

[Close]
BLAST of MELO3C020218 vs. NCBI nr
Match: gi|700202646|gb|KGN57779.1| (hypothetical protein Csa_3G298070 [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 2.9e-20
Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 1 

Query: 3   ASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYGEQLMVGEEDMDMEFIMESHI 62
           A+AT+     + ++ LL +   C+A    +P+ +  +  G++L+    D+D +F+MESH+
Sbjct: 2   AAATLSIRTTLAIVTLLLVAVGCDAFIASKPVFNLSSDLGKRLI---GDIDTDFLMESHV 61

Query: 63  SRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 120
           SRILA  + F+T  T +AN AS   C RPPRYDSCLG+ R+NPP  NC  YNRANPC
Sbjct: 62  SRILAELR-FETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

[Close]
BLAST of MELO3C020218 vs. NCBI nr
Match: gi|700198642|gb|KGN53800.1| (hypothetical protein Csa_4G131140 [Cucumis sativus])

HSP 1 Score: 105.1 bits (261), Expect = 8.4e-20
Identity = 52/117 (44.44%), Postives = 67/117 (57.26%), Query Frame = 1 

Query: 3   ASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYGEQLMVGEEDMDMEFIMESHI 62
           A+   IP   + ++ LL  P+ C   TT     S      E  +VG+E +D EF+ME+  
Sbjct: 2   ATTFSIPTMAILILTLLFNPTRCN--TTVNETTSEWCYGSENCLVGDESLDSEFLMETET 61

Query: 63  SRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 120
           SR+L   QN QT  T+D N+ S   CGRPPRYDSC G++R  P P NC   NRANPC
Sbjct: 62  SRMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

The following BLAST results are available for this feature:
BLAST of MELO3C020218 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCJ4_CUCSA9.0e-5383.19Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298580 PE=4 SV=1[more]
A0A0A0L711_CUCSA1.1e-2959.66Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298570 PE=4 SV=1[more]
A0A0A0L9X5_CUCSA2.0e-2045.30Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298070 PE=4 SV=1[more]
A0A0A0KVZ2_CUCSA5.9e-2044.44Uncharacterized protein OS=Cucumis sativus GN=Csa_4G131140 PE=4 SV=1[more]
A0A0A0KW62_CUCSA4.1e-1342.50Uncharacterized protein OS=Cucumis sativus GN=Csa_4G130630 PE=4 SV=1[more]
BLAST of MELO3C020218 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202648|gb|KGN57781.1|1.3e-5283.19hypothetical protein Csa_3G298580 [Cucumis sativus][more]
gi|778680757|ref|XP_011651393.1|1.5e-2959.66PREDICTED: uncharacterized protein LOC105434882 [Cucumis sativus][more]
gi|659114334|ref|XP_008457017.1|7.6e-2960.00PREDICTED: uncharacterized protein LOC103496797 [Cucumis melo][more]
gi|700202646|gb|KGN57779.1|2.9e-2045.30hypothetical protein Csa_3G298070 [Cucumis sativus][more]
gi|700198642|gb|KGN53800.1|8.4e-2044.44hypothetical protein Csa_4G131140 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU47579melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020218T1MELO3C020218T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU47579MU47579transcribed_cluster