CsaV3_3G015530 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G015530
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionDNA binding protein
Locationchr3 : 11576590 .. 11579167 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATTATTATTATTAATTTAAAAAAGAAATTGATAAAATTATTAGATTCCACATAATGACATCAAAAGTGCCACTTGATAATTGAGATACAATTTTCTTTTTAGAGAAAGAAGTATAACTGTGGCGCAGTCTAAGTATGAAAGAAGAAAGAGCCAAGCGGCATGAAGTTTTCCACTGGGTCTTAGCCTCATTTGTTGAAATAAAATACTTCAGCTTCAAATTCAACCAAAGCAAAATAATGAATATTGGTCTTTTAAATATTTTAAATATGCGTCGAAGATTAAATTGATCTTCTTCTCTTCTTCTTCTTCTTCGTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTCTTCTTCTTCTCAGATCCCCACCGGGCTTTCATTGGATTCTCTCTCTCCGTCTCCCATTCTAGGGTTTCTGTTCCGGCGAATGCTACTGTTCCTCCGATGAATCGCCAACACTCCAACCATCTTCAATCCAACTCCATTTCTCACTGCCAACAGTGCGGCATCTCTCAATCCGCCTGTTGGATCCTCCACAATGTTCGTCACAAAGCCACTTTCCGTCGTCTCTGCACTAATTGTGTCCTCAAGCACAATCTCTCCCGTTTTTGTCCTCTTTGCTTCGATGTTTATGAGGATTCAACTCCTCCGCCGTCTCATCATCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGTTTCCTTTCGATTTTCCTCTACCTTCCTATGCCCTCTCTGCTCCGATCCTCGTTTTGTCTTCTTCGATGGTTTTGACTCCGGCGGCAGCCTTTGTCAATCGGAGTCTACTGTCGCCTTTTTAGCCGGAAAAAATGTTGATGCTAAATCAGGGAAAGCTATTGTCGCTGCGGCTCGTGTGTCCGCTCAATCCATGAGGAGAGCAGCTCTTGACGCTAGGGCTGTTGCGGAGATGAAGATAAAAAACGCCGCGTTTGCCAAGAAACAGGCTACTCTCGCATTGGAACAGCTTGCGTATCTTGTTCTTCAGGAGAAGGATAAAAATGGATATTCTAAAAGTAATGGAGATGCTGTTGATAGTGAGAGGAAGGTTGAAGAAGAAGAATACAAGCTACAGGAGAAAGATGTAACCGCCATTTTCGATCTATGAGGGGGAATCGAACTCCATAACGAAGGTAGTTGATTAAGGAAACTAACTGTAGAGGGTAGTCTTGTTCAACTGTCTCATTCAATTGAGTTCCTCGAAGATTCAGTAGAATACAAAGCGTTGAGGTACTATCAAACCATCCACAGAAACCTTCTGGATCAATGTAGTGATGAACAATCAATTGAGGGAAGTCTGAATGAATTTCTATGTACATTTCAAAATTTCATCACTGTTTGCTTAACCGTTTTGGAAGATTTTCGCCTAATTGAAGTTCTATTGAGAACGTTGCATTGCAGCAGCTTGTTCAGCTTCTCTATTGATTCCAATTCTTTATTTTATCACTTGTGTTTCTGTTTTATCTGATTCTCAGCTTCTTCTTCATTCTGCTCTCTTCTATCGACTATTTTTGTCAGAATCTCAAAGCTTTTATGGGTGAGAACGCCATTGTTGCCACCTTTGAGCTACTAGAATCGCCATTCGCCCATTGATATTCAAATGCCAGTTCTGGCGGAGCAGTGGTCATATCAAGAAGTGACGGCGATGGCGATGGCGATGACGGCGGCGACGATTGAGCTGGTATTTTGTTAAGTGAAATTGACCGTTTCTCGTCTTTTCCGTTGTCTACAAAACTGCCATTTTCAATTTCTCCACCTTTTCAATCAATATGGTTTGAATTCTGCTGCTATTTTTCTGAGTTACCATTTCGATTCGTTTTTGGTTCAGGTGATTCGGCCGAGTCGACTCCACTCGTCTCGCTTTGAGAAAACCGAGTTGACTCATTGATAATTTCTCTGGGTCCAAAAAAAAGAAAACCCTTTTTTCATTTGACAACTAAAAAAAGAATACTATAATTAATCAATGGCTTCTATTATGCATTTATTAAATTATAATACTTAACAATTAGATTTTTTAGGTTAAATTACAAAATTTTGCATTAGAGAAGGTTATAATTTTGGTGATTTAGTTTATAATTAATATTTAGATTTGATATGTTATTCTAAATTTTGATCTAAGATTAAATCTAACTTTTTTAAACAATAGTTTTTAGCTTTCTTACGATTTGTAAATTTATATAATTTTTTCAACAAATTTATATTTCAACATTTTCTTTTTCCAATGAAAGTTGAGTTACTAAAATTGCAAAACACGTGTAAGTTCAATACCAAGATTGATGAAATTGAATGTTTAATACCAAACAAATAGAATCTGTCAAGATTGGAATCAACAATCGATCTTTTTTCAAAACATGCTATGCAAAACTCGTGTAAGTTCAACACCAAAAGAAAAAAAAAATAGAACAAGTTAGAAACACCTCAAAGCAGCTGATAGTTTAATTACTTTCAAACTTATACTCGTTTTATCGTTAACTTATATAATAGTTATAGAAATTGAATTTTATATAAAACTCAAATTAAAAAAAAAAAACAAGTTAGAAACACC

mRNA sequence

ATGAATCGCCAACACTCCAACCATCTTCAATCCAACTCCATTTCTCACTGCCAACAGTGCGGCATCTCTCAATCCGCCTGTTGGATCCTCCACAATGTTCGTCACAAAGCCACTTTCCGTCGTCTCTGCACTAATTGTGTCCTCAAGCACAATCTCTCCCGTTTTTGTCCTCTTTGCTTCGATGTTTATGAGGATTCAACTCCTCCGCCGTCTCATCATCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGTTTCCTTTCGATTTTCCTCTACCTTCCTATGCCCTCTCTGCTCCGATCCTCGTTTTGTCTTCTTCGATGGTTTTGACTCCGGCGGCAGCCTTTGTCAATCGGAGTCTACTGTCGCCTTTTTAGCCGGAAAAAATGTTGATGCTAAATCAGGGAAAGCTATTGTCGCTGCGGCTCGTGTGTCCGCTCAATCCATGAGGAGAGCAGCTCTTGACGCTAGGGCTGTTGCGGAGATGAAGATAAAAAACGCCGCGTTTGCCAAGAAACAGGCTACTCTCGCATTGGAACAGCTTGCGTATCTTGTTCTTCAGGAGAAGGATAAAAATGGATATTCTAAAAGTAATGGAGATGCTGTTGATAGTGAGAGGAAGGTTGAAGAAGAAGAATACAAGCTACAGGAGAAAGATGTAACCGCCATTTTCGATCTATGA

Coding sequence (CDS)

ATGAATCGCCAACACTCCAACCATCTTCAATCCAACTCCATTTCTCACTGCCAACAGTGCGGCATCTCTCAATCCGCCTGTTGGATCCTCCACAATGTTCGTCACAAAGCCACTTTCCGTCGTCTCTGCACTAATTGTGTCCTCAAGCACAATCTCTCCCGTTTTTGTCCTCTTTGCTTCGATGTTTATGAGGATTCAACTCCTCCGCCGTCTCATCATCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGTTTCCTTTCGATTTTCCTCTACCTTCCTATGCCCTCTCTGCTCCGATCCTCGTTTTGTCTTCTTCGATGGTTTTGACTCCGGCGGCAGCCTTTGTCAATCGGAGTCTACTGTCGCCTTTTTAGCCGGAAAAAATGTTGATGCTAAATCAGGGAAAGCTATTGTCGCTGCGGCTCGTGTGTCCGCTCAATCCATGAGGAGAGCAGCTCTTGACGCTAGGGCTGTTGCGGAGATGAAGATAAAAAACGCCGCGTTTGCCAAGAAACAGGCTACTCTCGCATTGGAACAGCTTGCGTATCTTGTTCTTCAGGAGAAGGATAAAAATGGATATTCTAAAAGTAATGGAGATGCTGTTGATAGTGAGAGGAAGGTTGAAGAAGAAGAATACAAGCTACAGGAGAAAGATGTAACCGCCATTTTCGATCTATGA

Protein sequence

MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL
Homology
[Close]
BLAST of CsaV3_3G015530 vs. NCBI nr
Match: KGN57205.1 (hypothetical protein Csa_3G171130 [Cucumis sativus])

HSP 1 Score: 364.8 bits (935), Expect = 2.2e-97
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 66  MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 125

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC
Sbjct: 126 DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 185

Query: 121 QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 186 QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 245

Query: 181 XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 231
           XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL
Sbjct: 246 XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 295

[Close]
BLAST of CsaV3_3G015530 vs. NCBI nr
Match: XP_004147629.1 (PREDICTED: uncharacterized protein LOC101204799 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 2.5e-93
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 

Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC
Sbjct: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120

Query: 121 QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD 224
           XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD
Sbjct: 181 XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD 223

[Close]
BLAST of CsaV3_3G015530 vs. NCBI nr
Match: XP_016899011.1 (PREDICTED: uncharacterized protein LOC103483924 [Cucumis melo])

HSP 1 Score: 324.7 bits (831), Expect = 2.5e-85
Identity = 204/229 (89.08%), Postives = 210/229 (91.70%), Query Frame = 0 

Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSG SL 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           QSESTVAFLAGKNVDAK    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 180

Query: 181 XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFD 230
               LAYLVLQEKDKNGYSKSNGDAV SER VEEEEYKL EK+   +F+
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKERVVLFN 228

[Close]
BLAST of CsaV3_3G015530 vs. NCBI nr
Match: ADN34038.1 (DNA binding protein [Cucumis melo subsp. melo])

HSP 1 Score: 321.6 bits (823), Expect = 2.1e-84
Identity = 203/223 (91.03%), Postives = 207/223 (92.83%), Query Frame = 0 

Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSG SL 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           QSESTVAFLAGKNVDAK    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 180

Query: 181 XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD 224
               LAYLVLQEKDKNGYSKSNGDAV SER VEEEEYKL EK+
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKE 222

[Close]
BLAST of CsaV3_3G015530 vs. NCBI nr
Match: XP_022979918.1 (uncharacterized protein LOC111479468 [Cucurbita maxima])

HSP 1 Score: 256.5 bits (654), Expect = 8.5e-65
Identity = 156/229 (68.12%), Postives = 173/229 (75.55%), Query Frame = 0 

Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNR H NHLQSNSIS+C +CGISQS CWILHNVR KA+FRRLCTNCVLK+NLSRFCPLCF
Sbjct: 1   MNRPHCNHLQSNSISNCHECGISQSVCWILHNVRFKASFRRLCTNCVLKNNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           D+Y+DSTPP SH RVMCFRCPSISH+SC SFRFSSTFLCPLCSDP F FFDGFDS GSL 
Sbjct: 61  DIYDDSTPPSSHQRVMCFRCPSISHISCTSFRFSSTFLCPLCSDPCFAFFDGFDS-GSLR 120

Query: 121 QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           QSE  V+ LAG+  D K               XXXXXXXXXXXXXXXXXXX         
Sbjct: 121 QSELAVSVLAGR--DGKSAKAIVAAARVVAQSXXXXXXXXXXXXXXXXXXXVFAKKQATL 180

Query: 181 XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFD 230
               LAYLVLQEKD+NGY+K+NG+A     + EEEE +LQ + VTAI +
Sbjct: 181 ALERLAYLVLQEKDRNGYAKTNGNAAAGAVE-EEEETELQGEVVTAILE 225

[Close]
BLAST of CsaV3_3G015530 vs. TAIR10
Match: AT1G09520.1 (LOCATED IN: chloroplast)

HSP 1 Score: 85.9 bits (211), Expect = 3.6e-17
Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 0 

Query: 11  SNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPP 70
           +NS   C  CG S +  W++H VR +A+ R  CT+C+L+++ + FCP CF +Y+ S  PP
Sbjct: 20  ANSTERCDDCGSSDA--WVIHTVRLRASLRFFCTHCLLRNHPASFCPGCFALYDSS--PP 79

Query: 71  SHHRVMCF--RCPSISHLSCVSFRFSSTFLCPLCSDPR-FVFFDGF--DSGGSLCQSEST 130
           S  RV C    C S++H+ C       ++LCP C DP  F FF     ++G        +
Sbjct: 80  SFRRVSCSIKGCHSLTHIHCAGDESHLSYLCPPCRDPNSFSFFRPIVDENGSRFVDKALS 139

Query: 131 VAFLAGKNVDA 137
            AFL    + A
Sbjct: 140 EAFLCAAKIAA 146

[Close]
BLAST of CsaV3_3G015530 vs. TAIR10
Match: AT3G17460.1 (PHD finger family protein)

HSP 1 Score: 71.6 bits (174), Expect = 7.0e-13
Identity = 34/95 (35.79%), Postives = 50/95 (52.63%), Query Frame = 0 

Query: 30  LHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCV 89
           +H V     FRRLCT+C+LK     FC +CF++++++ PP +  R++C  CPS +HLSC 
Sbjct: 21  IHTVIKTGAFRRLCTDCLLKEYREHFCSVCFNLFDNAVPPQA--RIICVNCPSSTHLSCS 80

Query: 90  S--------------FRFSSTFLCPLCSDPRFVFF 111
           +                    F C  CS+P F FF
Sbjct: 81  TXXXXXXXXXXXXXXXXXXXXFTCQPCSNPNFTFF 113

[Close]
BLAST of CsaV3_3G015530 vs. TrEMBL
Match: tr|A0A0A0L5G4|A0A0A0L5G4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171130 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.5e-97
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 66  MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 125

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC
Sbjct: 126 DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 185

Query: 121 QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 186 QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 245

Query: 181 XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 231
           XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL
Sbjct: 246 XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 295

[Close]
BLAST of CsaV3_3G015530 vs. TrEMBL
Match: tr|A0A1S4DSP5|A0A1S4DSP5_CUCME (uncharacterized protein LOC103483924 OS=Cucumis melo OX=3656 GN=LOC103483924 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.7e-85
Identity = 204/229 (89.08%), Postives = 210/229 (91.70%), Query Frame = 0 

Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSG SL 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           QSESTVAFLAGKNVDAK    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 180

Query: 181 XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFD 230
               LAYLVLQEKDKNGYSKSNGDAV SER VEEEEYKL EK+   +F+
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKERVVLFN 228

[Close]
BLAST of CsaV3_3G015530 vs. TrEMBL
Match: tr|E5GC39|E5GC39_CUCME (DNA binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.4e-84
Identity = 203/223 (91.03%), Postives = 207/223 (92.83%), Query Frame = 0 

Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSG SL 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESTVAFLAGKNVDAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           QSESTVAFLAGKNVDAK    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 180

Query: 181 XXXXLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD 224
               LAYLVLQEKDKNGYSKSNGDAV SER VEEEEYKL EK+
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKE 222

[Close]
BLAST of CsaV3_3G015530 vs. TrEMBL
Match: tr|A0A067JYW7|A0A067JYW7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19088 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 4.3e-25
Identity = 62/129 (48.06%), Postives = 80/129 (62.02%), Query Frame = 0 

Query: 15  SHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHR 74
           S C  CG  +   W+LHNVRH+A +RRLCTNC+LK +   FCP CF+VY++S PP  H R
Sbjct: 4   SECGGCGGVRR--WVLHNVRHRAAYRRLCTNCILKSHQGLFCPFCFEVYDESLPP--HER 63

Query: 75  VMCFRCPSISHLSCVSF---RFSSTFLCPLCSDPRFVFF----DGFDSGGSLCQSESTVA 134
           +MC +CPSISHLSCV +       +FLCP CS P F FF    +   + G+    +S  A
Sbjct: 64  LMCLKCPSISHLSCVPWSHPHSPPSFLCPACSTPNFSFFNLDSNNATNSGTPIDKDSARA 123

Query: 135 FLAGKNVDA 137
            LAG  + A
Sbjct: 124 LLAGARIAA 128

[Close]
BLAST of CsaV3_3G015530 vs. TrEMBL
Match: tr|A0A2C9UXR9|A0A2C9UXR9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G020800 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 9.7e-25
Identity = 61/114 (53.51%), Postives = 74/114 (64.91%), Query Frame = 0 

Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNR H +H      SHC  CG  +   W+LHNVRH+A +RRLCTNC+LK +   FCP CF
Sbjct: 1   MNRDHQSH------SHCGGCGGDRR--WVLHNVRHRAAYRRLCTNCILKTHQGLFCPFCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSF---RFSSTFLCPLCSDPRFVFFD 112
            VYE+S PP    R+MC +CPSISHLSCV       + +FLCP CS P F FF+
Sbjct: 61  QVYEESLPPKD--RLMCLKCPSISHLSCVPCSHPHSTPSFLCPACSIPNFSFFN 104

The following BLAST results are available for this feature:
BLAST of CsaV3_3G015530 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57205.12.2e-97100.00hypothetical protein Csa_3G171130 [Cucumis sativus][more]
XP_004147629.12.5e-93100.00PREDICTED: uncharacterized protein LOC101204799 [Cucumis sativus][more]
XP_016899011.12.5e-8589.08PREDICTED: uncharacterized protein LOC103483924 [Cucumis melo][more]
ADN34038.12.1e-8491.03DNA binding protein [Cucumis melo subsp. melo][more]
XP_022979918.18.5e-6568.12uncharacterized protein LOC111479468 [Cucurbita maxima][more]
BLAST of CsaV3_3G015530 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09520.13.6e-1735.88LOCATED IN: chloroplast[more]
AT3G17460.17.0e-1335.79PHD finger family protein[more]
BLAST of CsaV3_3G015530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G015530 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L5G4|A0A0A0L5G4_CUCSA1.5e-97100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171130 PE=4 SV=1[more]
tr|A0A1S4DSP5|A0A1S4DSP5_CUCME1.7e-8589.08uncharacterized protein LOC103483924 OS=Cucumis melo OX=3656 GN=LOC103483924 PE=... [more]
tr|E5GC39|E5GC39_CUCME1.4e-8491.03DNA binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A067JYW7|A0A067JYW7_JATCU4.3e-2548.06Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19088 PE=4 SV=1[more]
tr|A0A2C9UXR9|A0A2C9UXR9_MANES9.7e-2553.51Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G020800 PE=4 SV=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
molecular_function GO:0003674 molecular_function
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016740 transferase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G015530.1CsaV3_3G015530.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34451:SF2PHD FINGER FAMILY PROTEINcoord: 9..215
NoneNo IPR availablePANTHERPTHR34451FAMILY NOT NAMEDcoord: 9..215

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G015530CSPI03G15350Wild cucumber (PI 183967)cpicucB144
CsaV3_3G015530Cucsa.252170Cucumber (Gy14) v1cgycucB387
CsaV3_3G015530CmaCh14G015570Cucurbita maxima (Rimu)cmacucB0291
CsaV3_3G015530CmaCh06G015870Cucurbita maxima (Rimu)cmacucB0965
CsaV3_3G015530CmoCh06G015810Cucurbita moschata (Rifu)cmocucB0953
CsaV3_3G015530CmoCh14G015920Cucurbita moschata (Rifu)cmocucB0283
CsaV3_3G015530Cp4.1LG08g05540Cucurbita pepo (Zucchini)cpecucB1056
CsaV3_3G015530Carg19594Silver-seed gourdcarcucB0309
CsaV3_3G015530Carg25656Silver-seed gourdcarcucB0777
CsaV3_3G015530Cla021828Watermelon (97103) v1cucwmB239
CsaV3_3G015530MELO3C006751Melon (DHL92) v3.5.1cucmeB236
CsaV3_3G015530Lsi05G013860Bottle gourd (USVL1VR-Ls)cuclsiB229
CsaV3_3G015530MELO3C006751.2Melon (DHL92) v3.6.1cucmedB230
CsaV3_3G015530Cla97C05G088500Watermelon (97103) v2cucwmbB206
CsaV3_3G015530Bhi01G000818Wax gourdcucwgoB272
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G015530Silver-seed gourdcarcucB0079
CsaV3_3G015530Cucumber (Gy14) v2cgybcucB117
CsaV3_3G015530Cucurbita maxima (Rimu)cmacucB0425
CsaV3_3G015530Cucurbita moschata (Rifu)cmocucB0420
CsaV3_3G015530Cucurbita pepo (Zucchini)cpecucB0154
CsaV3_3G015530Cucurbita pepo (Zucchini)cpecucB0759
CsaV3_3G015530Bottle gourd (USVL1VR-Ls)cuclsiB163
CsaV3_3G015530Bottle gourd (USVL1VR-Ls)cuclsiB245
CsaV3_3G015530Melon (DHL92) v3.5.1cucmeB176
CsaV3_3G015530Melon (DHL92) v3.6.1cucmedB167
CsaV3_3G015530Watermelon (Charleston Gray)cucwcgB225
CsaV3_3G015530Watermelon (Charleston Gray)cucwcgB254
CsaV3_3G015530Wax gourdcucwgoB257