CSPI03G15350 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G15350
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	DNA binding protein
Location	Chr3 : 11464656 .. 11465941 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGGCATGAAGTTTTCCACTGGGTCTTAGCCTCATTTGTTGAAATAAAATACTTCAGCTTCAAATTCAACCAAAGCAAAATAATGAATATTGGTCTTTTAAATATTTTAAATATGCGTCGAAGATTAAATTGATCTTCTTCTCTTCTTCTTCTTCTTCGTCTTTCTTTCTTTCCTTCTTCTTTCTTTCTTTCTTTCTTCTTCTTCTCAGATCCCCACCGGGCTTTCATTGGATTCTCTCTCTCCGTCTCCCATTCTAGGGTTTCTGTTCCGGCGAATGCTACTGTTCCTCCGATGAATCGCCAACACTCCAACCATCTTCAATCCAACTCCATTTCTCACTGCCAACAGTGCGGCATCTCTCAATCCGCCTGTTGGATCCTCCACAATGTTCGTCACAAAGCCACTTTCCGTCGTCTCTGCACTAATTGTGTCCTCAAGCACAATCTCTCCCGTTTTTGTCCTCTTTGCTTCGATGTTTATGAGGATTCAACTCCTCCGCCGTCTCATCATCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGTTTCCTTTCGATTTTCCTCTACCTTCCTATGCCCTCTCTGCTCCGATCCTCGTTTTGTCTTCTTCGATGGTTTTGACTCCGGCGGCAGCCTTTGTCAATCGGAGTCTACTGTCGCCTTTTTAGCCGGAAAAAATGTTGATGCTAAATCAGGGAAAGCTATTGTCGCTGCGGCTCGTGTGTCCGCTCAATCCATGAGGAGAGCAGCTCTTGACGCTAGGGCTGTTGCGGAGATGAAGATAAAAAACGCCGCGTTTGCCAAGAAACAGGCTACTCTCGCATTGGAACAGCTTGCGTATCTTGTTCTTCAGGAGAAGGATAAAAATGGATATTCTAAAAGTAATGGAGATGCTGTTGATAGTGAGAGGAAGGTTGAAGAAGAAGAATACAAGCTACAGGAGAAAGATGTAACCGCCATTTTCGATCTATGAGGGGGAATCGAACTCCATAACTAGTTGATTAAGGAAACTAACTGTAGAGGGTAGTCTTGTTCAACTGTCTCATTCAATTGAGTTCCTCGAAGATTCAGTAGAATACAAAGCGTTGAGGTACTATCAAACCATCCACAGAAACCTTCTGGATCAATGTAGTGATGAACAATCAATTGAGGGAAGTCTGAATGAATTTCTATGTACATTTCAAAATTTCATCACTGTTTGCTTAACCGTTTTGGAAGATTTTCGCCTAATTGAAGTTCTATTGAGAACGTTGCATTGCAGCAGCTTGTTCAGC

mRNA sequence

ATGAATCGCCAACACTCCAACCATCTTCAATCCAACTCCATTTCTCACTGCCAACAGTGCGGCATCTCTCAATCCGCCTGTTGGATCCTCCACAATGTTCGTCACAAAGCCACTTTCCGTCGTCTCTGCACTAATTGTGTCCTCAAGCACAATCTCTCCCGTTTTTGTCCTCTTTGCTTCGATGTTTATGAGGATTCAACTCCTCCGCCGTCTCATCATCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGTTTCCTTTCGATTTTCCTCTACCTTCCTATGCCCTCTCTGCTCCGATCCTCGTTTTGTCTTCTTCGATGGTTTTGACTCCGGCGGCAGCCTTTGTCAATCGGAGTCTACTGTCGCCTTTTTAGCCGGAAAAAATGTTGATGCTAAATCAGGGAAAGCTATTGTCGCTGCGGCTCGTGTGTCCGCTCAATCCATGAGGAGAGCAGCTCTTGACGCTAGGGCTGTTGCGGAGATGAAGATAAAAAACGCCGCGTTTGCCAAGAAACAGGCTACTCTCGCATTGGAACAGCTTGCGTATCTTGTTCTTCAGGAGAAGGATAAAAATGGATATTCTAAAAGTAATGGAGATGCTGTTGATAGTGAGAGGAAGGTTGAAGAAGAAGAATACAAGCTACAGGAGAAAGATGTAACCGCCATTTTCGATCTATGA

Coding sequence (CDS)

ATGAATCGCCAACACTCCAACCATCTTCAATCCAACTCCATTTCTCACTGCCAACAGTGCGGCATCTCTCAATCCGCCTGTTGGATCCTCCACAATGTTCGTCACAAAGCCACTTTCCGTCGTCTCTGCACTAATTGTGTCCTCAAGCACAATCTCTCCCGTTTTTGTCCTCTTTGCTTCGATGTTTATGAGGATTCAACTCCTCCGCCGTCTCATCATCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGTTTCCTTTCGATTTTCCTCTACCTTCCTATGCCCTCTCTGCTCCGATCCTCGTTTTGTCTTCTTCGATGGTTTTGACTCCGGCGGCAGCCTTTGTCAATCGGAGTCTACTGTCGCCTTTTTAGCCGGAAAAAATGTTGATGCTAAATCAGGGAAAGCTATTGTCGCTGCGGCTCGTGTGTCCGCTCAATCCATGAGGAGAGCAGCTCTTGACGCTAGGGCTGTTGCGGAGATGAAGATAAAAAACGCCGCGTTTGCCAAGAAACAGGCTACTCTCGCATTGGAACAGCTTGCGTATCTTGTTCTTCAGGAGAAGGATAAAAATGGATATTCTAAAAGTAATGGAGATGCTGTTGATAGTGAGAGGAAGGTTGAAGAAGAAGAATACAAGCTACAGGAGAAAGATGTAACCGCCATTTTCGATCTATGA

Homology

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BLAST of CSPI03G15350 vs. TrEMBL
Match: A0A0A0L5G4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171130 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 4.5e-125
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 66  MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 125

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC
Sbjct: 126 DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 185

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 186 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 245

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 231
           ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL
Sbjct: 246 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 295

[Close]

BLAST of CSPI03G15350 vs. TrEMBL
Match: E5GC39_CUCME (DNA binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 5.6e-112
Identity = 212/223 (95.07%), Postives = 216/223 (96.86%), Query Frame = 1


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSG SL 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD 224
           ALEQLAYLVLQEKDKNGYSKSNGDAV SER VEEEEYKL EK+
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKE 222

[Close]

BLAST of CSPI03G15350 vs. TrEMBL
Match: A0A067JYW7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19088 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 8.6e-36
Identity = 93/207 (44.93%), Postives = 125/207 (60.39%), Query Frame = 1


Query: 15  SHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHR 74
           S C  CG  +   W+LHNVRH+A +RRLCTNC+LK +   FCP CF+VY++S PP  H R
Sbjct: 4   SECGGCGGVRR--WVLHNVRHRAAYRRLCTNCILKSHQGLFCPFCFEVYDESLPP--HER 63

Query: 75  VMCFRCPSISHLSCVSF---RFSSTFLCPLCSDPRFVFFDGFDSGGSLCQSESTVAFLAG 134
           +MC +CPSISHLSCV +       +FLCP CS P F FF+           +S  A  +G
Sbjct: 64  LMCLKCPSISHLSCVPWSHPHSPPSFLCPACSTPNFSFFN----------LDSNNATNSG 123

Query: 135 KNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQ 194
             +D  S +A++A AR++A SM +AA  AR  AE ++K AA AKK+A  ALE+LAYL  +
Sbjct: 124 TPIDKDSARALLAGARIAAVSMAKAATVARVEAERRVKEAALAKKRAREALERLAYLAAK 183

Query: 195 EKDKNGYSKSNGDAVDSERKVEEEEYK 219
           EK+     + +  A  +  KV     K
Sbjct: 184 EKEMKEKDRDSKVATGTGIKVSNNNNK 196

[Close]

BLAST of CSPI03G15350 vs. TrEMBL
Match: A0A0D2RGU6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G072500 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.6e-32
Identity = 86/214 (40.19%), Postives = 130/214 (60.75%), Query Frame = 1


Query: 9   LQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTP 68
           ++ + +S C  CG  +   ++LHN+RH+A++RRLCTNCVLK++   FCP+C +V+ +S  
Sbjct: 1   MKRDQLSECGGCGAPER--FLLHNLRHRASYRRLCTNCVLKNHQGLFCPICLEVFNES-- 60

Query: 69  PPSHHRVMCFRCPSISHLSCVSFRFS-STFLCPLCSDPRFVFFD-----------GFDSG 128
           PP H R++C +CPSISHLSC S   S S+F CP CS+P F FF+               G
Sbjct: 61  PPPHQRLICLKCPSISHLSCSSSSLSPSSFTCPPCSNPNFSFFNLTPTKKPKSTPDHPPG 120

Query: 129 GSLCQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKK 188
            +L   +        + +D ++ KA++AAA+++A SM +AA  A+  AE ++K A  AKK
Sbjct: 121 STLDGDDDNNKTTNTRVIDKEAAKALLAAAKIAAASMTKAAAVAKVEAERRVKEATLAKK 180

Query: 189 QATLALEQLAYLVLQEKDKN-----GYSKSNGDA 206
           +A  ALE+LA L  ++ D++     G  KS  DA
Sbjct: 181 RAKEALERLALLARKDNDRHKSSLVGIPKSKPDA 210

[Close]

BLAST of CSPI03G15350 vs. TrEMBL
Match: A0A061EQG5_THECC (Translation initiation factor IF-2, putative OS=Theobroma cacao GN=TCM_021495 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.4e-32
Identity = 84/192 (43.75%), Postives = 122/192 (63.54%), Query Frame = 1


Query: 16  HCQQCG-ISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHR 75
           H  +CG  S     +LHNVR++A++RRLCTNCVLK++   FCP+C +V+ +S  PP H R
Sbjct: 5   HQAECGGCSVPGRLLLHNVRYRASYRRLCTNCVLKNHQGLFCPICLEVFNES--PPPHQR 64

Query: 76  VMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKN- 135
           ++C +CPSISHLSC S    S+F CP CS+P F FF+  D   +  + +ST     G N 
Sbjct: 65  LICLKCPSISHLSCSSSSSQSSFTCPPCSNPNFSFFN-VDPNITNKKPKSTPDHQGGSND 124

Query: 136 ----------VDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALE 195
                     +D ++ KA++AAA+++A SM +AA  AR  AE ++K A  AKK+A  ALE
Sbjct: 125 DHDNDKKKRVIDREAAKALLAAAKIAAASMSKAAAVARVEAERRVKEATLAKKRAKEALE 184

[Close]

BLAST of CSPI03G15350 vs. TAIR10
Match: AT1G09520.1 (AT1G09520.1 LOCATED IN: chloroplast)

HSP 1 Score: 108.2 bits (269), Expect = 6.8e-24
Identity = 73/206 (35.44%), Postives = 110/206 (53.40%), Query Frame = 1


Query: 11  SNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPP 70
           +NS   C  CG S +  W++H VR +A+ R  CT+C+L+++ + FCP CF +Y+ S  PP
Sbjct: 20  ANSTERCDDCGSSDA--WVIHTVRLRASLRFFCTHCLLRNHPASFCPGCFALYDSS--PP 79

Query: 71  SHHRVMCF--RCPSISHLSCVSFRFSSTFLCPLCSDPR-FVFFDGF-DSGGSLCQSESTV 130
           S  RV C    C S++H+ C       ++LCP C DP  F FF    D  GS        
Sbjct: 80  SFRRVSCSIKGCHSLTHIHCAGDESHLSYLCPPCRDPNSFSFFRPIVDENGS-------- 139

Query: 131 AFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLA 190
                + VD    +A + AA+++A SM +A + A+   + + K AA AKK+A  ALEQ+ 
Sbjct: 140 -----RFVDKALSEAFLCAAKIAASSMNKAVMTAKCETDRRGKEAALAKKRAREALEQVV 199

Query: 191 YLVLQEKDKNGYSKSNGDAVDSERKV 213
            L  +EK ++   K     VD + K+
Sbjct: 200 MLDAKEKARSVVPKLKEAPVDQKPKL 208

[Close]

BLAST of CSPI03G15350 vs. TAIR10
Match: AT3G17460.1 (AT3G17460.1 PHD finger family protein)

HSP 1 Score: 79.7 bits (195), Expect = 2.6e-15
Identity = 59/187 (31.55%), Postives = 89/187 (47.59%), Query Frame = 1


Query: 30  LHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCFRCPSISHLSCV 89
           +H V     FRRLCT+C+LK     FC +CF++++++ PP +  R++C  CPS +HLSC 
Sbjct: 21  IHTVIKTGAFRRLCTDCLLKEYREHFCSVCFNLFDNAVPPQA--RIICVNCPSSTHLSCS 80

Query: 90  SFRFS--------------STFLCPLCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKNVD 149
           +   S              S+F C  CS+P F FF          +S           + 
Sbjct: 81  TQPPSSSAASSSSSAPPPASSFTCQPCSNPNFTFFP---------KSRVNEDVPDETPLT 140

Query: 150 AKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDK 203
            KS  A+VAA  +S  +M +A    +  A  KI  A  AK +A  AL  L  +V+++   
Sbjct: 141 PKSAMALVAAGNISVANMNKAVALLKEEALKKIIAAKTAKLRAKGALTNLQDIVIRQSKV 196

[Close]

BLAST of CSPI03G15350 vs. NCBI nr
Match: gi|700202072|gb|KGN57205.1| (hypothetical protein Csa_3G171130 [Cucumis sativus])

HSP 1 Score: 455.3 bits (1170), Expect = 6.4e-125
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 66  MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 125

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC
Sbjct: 126 DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 185

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 186 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 245

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 231
           ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL
Sbjct: 246 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 295

[Close]

BLAST of CSPI03G15350 vs. NCBI nr
Match: gi|449459790|ref|XP_004147629.1| (PREDICTED: uncharacterized protein LOC101204799 [Cucumis sativus])

HSP 1 Score: 441.4 bits (1134), Expect = 9.5e-121
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC
Sbjct: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD 224
           ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD 223

[Close]

BLAST of CSPI03G15350 vs. NCBI nr
Match: gi|659077036|ref|XP_008438997.1| (PREDICTED: uncharacterized protein LOC103483924 [Cucumis melo])

HSP 1 Score: 425.6 bits (1093), Expect = 5.4e-116
Identity = 219/230 (95.22%), Postives = 223/230 (96.96%), Query Frame = 1


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSG SL 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFDL 231
           ALEQLAYLVLQEKDKNGYSKSNGDAV SER VEEEEYKL EK+VTAIFDL
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKEVTAIFDL 229

[Close]

BLAST of CSPI03G15350 vs. NCBI nr
Match: gi|307136200|gb|ADN34038.1| (DNA binding protein [Cucumis melo subsp. melo])

HSP 1 Score: 411.8 bits (1057), Expect = 8.1e-112
Identity = 212/223 (95.07%), Postives = 216/223 (96.86%), Query Frame = 1


Query: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60
           MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120
           DVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSG SL 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKD 224
           ALEQLAYLVLQEKDKNGYSKSNGDAV SER VEEEEYKL EK+
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKE 222

[Close]

BLAST of CSPI03G15350 vs. NCBI nr
Match: gi|720048003|ref|XP_010270989.1| (PREDICTED: uncharacterized protein LOC104607149 [Nelumbo nucifera])

HSP 1 Score: 159.5 bits (402), Expect = 7.2e-36
Identity = 91/210 (43.33%), Postives = 132/210 (62.86%), Query Frame = 1


Query: 15  SHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHR 74
           S C  CG  +   W+LHNVRH+  +RRLCT+CVLK +   FCP CF+VYE S PP  H R
Sbjct: 8   SECGGCGSEER--WLLHNVRHRGIYRRLCTSCVLKFHGGSFCPHCFEVYEGSLPP--HER 67

Query: 75  VMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLCQSESTVAFLAGKNV 134
           VMC +CPS++HL+CV    +  ++CP C +P F+FF+   S   +   E   A   G+ V
Sbjct: 68  VMCLKCPSVAHLACVGIESAPRYVCPTCLNPAFLFFEVGASSKKIKVGEGDSANGGGRRV 127

Query: 135 -DAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEK 194
            D KS K  +A+A+++A SM +AA  AR  AE ++K A+  KK+A  ALE++A+LV +EK
Sbjct: 128 LDQKSAKVFLASAKIAAVSMSKAAAVARIEAERRVKEASVTKKRAREALERVAFLVAKEK 187

Query: 195 DKNGYSKSNGDAVDSERKVEEEEYKLQEKD 224
           +K+          D E++ E+E+ K +EK+
Sbjct: 188 EKD---------KDKEKEKEKEKEKDKEKE 204

The following BLAST results are available for this feature:

BLAST of CSPI03G15350 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G15350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5G4_CUCSA	4.5e-125	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171130 PE=4 SV=1	[more]
E5GC39_CUCME	5.6e-112	95.07	DNA binding protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A067JYW7_JATCU	8.6e-36	44.93	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19088 PE=4 SV=1	[more]
A0A0D2RGU6_GOSRA	2.6e-32	40.19	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G072500 PE=4 SV=1	[more]
A0A061EQG5_THECC	3.4e-32	43.75	Translation initiation factor IF-2, putative OS=Theobroma cacao GN=TCM_021495 PE...	[more]

BLAST of CSPI03G15350 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09520.1	6.8e-24	35.44	LOCATED IN: chloroplast	[more]
AT3G17460.1	2.6e-15	31.55	PHD finger family protein	[more]

BLAST of CSPI03G15350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202072\|gb\|KGN57205.1\|	6.4e-125	100.00	hypothetical protein Csa_3G171130 [Cucumis sativus]	[more]
gi\|449459790\|ref\|XP_004147629.1\|	9.5e-121	100.00	PREDICTED: uncharacterized protein LOC101204799 [Cucumis sativus]	[more]
gi\|659077036\|ref\|XP_008438997.1\|	5.4e-116	95.22	PREDICTED: uncharacterized protein LOC103483924 [Cucumis melo]	[more]
gi\|307136200\|gb\|ADN34038.1\|	8.1e-112	95.07	DNA binding protein [Cucumis melo subsp. melo]	[more]
gi\|720048003\|ref\|XP_010270989.1\|	7.2e-36	43.33	PREDICTED: uncharacterized protein LOC104607149 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016746	transferase activity, transferring acyl groups
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G15350.1	CSPI03G15350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34451	FAMILY NOT NAMED	coord: 1..196 score: 1.4
None	No IPR available	PANTHER	PTHR34451:SF2	GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MTO12	coord: 1..196 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G15350	Cla021828	Watermelon (97103) v1	cpiwmB231
CSPI03G15350	Csa3G171130	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G15350	MELO3C006751	Melon (DHL92) v3.5.1	cpimeB230
CSPI03G15350	Lsi05G013860	Bottle gourd (USVL1VR-Ls)	cpilsiB208
CSPI03G15350	MELO3C006751.2	Melon (DHL92) v3.6.1	cpimedB224
CSPI03G15350	CsaV3_3G015530	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G15350	Cla97C05G088500	Watermelon (97103) v2	cpiwmbB209
CSPI03G15350	Bhi01G000818	Wax gourd	cpiwgoB269
CSPI03G15350	Cucsa.252170	Cucumber (Gy14) v1	cgycpiB383
CSPI03G15350	CmaCh06G015870	Cucurbita maxima (Rimu)	cmacpiB826
CSPI03G15350	CmaCh14G015570	Cucurbita maxima (Rimu)	cmacpiB255
CSPI03G15350	CmoCh06G015810	Cucurbita moschata (Rifu)	cmocpiB814
CSPI03G15350	CmoCh14G015920	Cucurbita moschata (Rifu)	cmocpiB243
CSPI03G15350	Cp4.1LG08g05540	Cucurbita pepo (Zucchini)	cpecpiB861
CSPI03G15350	Carg25656	Silver-seed gourd	carcpiB0774
CSPI03G15350	Carg19594	Silver-seed gourd	carcpiB0310

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G15350	Wax gourd	cpiwgoB253
CSPI03G15350	Melon (DHL92) v3.5.1	cpimeB174
CSPI03G15350	Watermelon (Charleston Gray)	cpiwcgB226
CSPI03G15350	Cucurbita pepo (Zucchini)	cpecpiB611
CSPI03G15350	Melon (DHL92) v3.6.1	cpimedB165
CSPI03G15350	Cucumber (Gy14) v2	cgybcpiB110