Cla021828 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla021828
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	DNA binding protein (AHRD V1 ***- E5GC39_CUCME)
Location	Chr5 : 6662169 .. 6662879 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCGCTCACACTGCAACCAACTTCAATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCCCAATCCGCCTGTTGGATCCTCCACAATGTCCGTCTCAAAGCCTCCTTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGCACAATCTCCCCCGTTTCTGTCCTCTTTGCTTCGACGTTTACGACGATTCGACTCCTCCACCATCTCATCAGCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGCTTCCTTTCGTTTTTCGTCTAACTTCCTATGCCCTCTCTGCTCCGATCCTTGTTTTTCATTCTTCGATGGTTTTAACTCCGGCGGCCTTTGTCAATCTGAGTCCAACGTCGCCTTTTTGGCCGGGAGAAGCGTTGATGGTAAATCAGCGAAAGCGATTGTCGCTGCGGCTCGTGTCTCAGCTCAATCCATGCGGAGAGCAGCTCTCGATGCTAGGGCTGTAGCGGAGATGAAGATCAAGAATGCTGCCTTTGCTAAGAAACAAGCTACTCTCGCATTGGAACGGCTTGCTTATCTTGTGCTTCAGGAGAAGGACAAAAATGGATATGCTAAAACTAATGGAGATGCTGTTGCTGGTGAGAGGACGGTTGAAGAAGAAGATTCCAAGCTACCGGATAAAGGGGTAACAACCATTTTCGATCGTATGAAGGGGAATCAAACTACGTAG

mRNA sequence

ATGAATCGCTCACACTGCAACCAACTTCAATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCCCAATCCGCCTGTTGGATCCTCCACAATGTCCGTCTCAAAGCCTCCTTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGCACAATCTCCCCCGTTTCTGTCCTCTTTGCTTCGACGTTTACGACGATTCGACTCCTCCACCATCTCATCAGCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGCTTCCTTTCGTTTTTCGTCTAACTTCCTATGCCCTCTCTGCTCCGATCCTTGTTTTTCATTCTTCGATGGTTTTAACTCCGGCGGCCTTTGTCAATCTGAGTCCAACGTCGCCTTTTTGGCCGGGAGAAGCGTTGATGGTAAATCAGCGAAAGCGATTGTCGCTGCGGCTCGTGTCTCAGCTCAATCCATGCGGAGAGCAGCTCTCGATGCTAGGGCTGTAGCGGAGATGAAGATCAAGAATGCTGCCTTTGCTAAGAAACAAGCTACTCTCGCATTGGAACGGCTTGCTTATCTTGTGCTTCAGGAGAAGGACAAAAATGGATATGCTAAAACTAATGGAGATGCTGTTGCTGGTGAGAGGACGGTTGAAGAAGAAGATTCCAAGCTACCGGATAAAGGGGTAACAACCATTTTCGATCGTATGAAGGGGAATCAAACTACGTAG

Coding sequence (CDS)

ATGAATCGCTCACACTGCAACCAACTTCAATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCCCAATCCGCCTGTTGGATCCTCCACAATGTCCGTCTCAAAGCCTCCTTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGCACAATCTCCCCCGTTTCTGTCCTCTTTGCTTCGACGTTTACGACGATTCGACTCCTCCACCATCTCATCAGCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGCGCTTCCTTTCGTTTTTCGTCTAACTTCCTATGCCCTCTCTGCTCCGATCCTTGTTTTTCATTCTTCGATGGTTTTAACTCCGGCGGCCTTTGTCAATCTGAGTCCAACGTCGCCTTTTTGGCCGGGAGAAGCGTTGATGGTAAATCAGCGAAAGCGATTGTCGCTGCGGCTCGTGTCTCAGCTCAATCCATGCGGAGAGCAGCTCTCGATGCTAGGGCTGTAGCGGAGATGAAGATCAAGAATGCTGCCTTTGCTAAGAAACAAGCTACTCTCGCATTGGAACGGCTTGCTTATCTTGTGCTTCAGGAGAAGGACAAAAATGGATATGCTAAAACTAATGGAGATGCTGTTGCTGGTGAGAGGACGGTTGAAGAAGAAGATTCCAAGCTACCGGATAAAGGGGTAACAACCATTTTCGATCGTATGAAGGGGAATCAAACTACGTAG

Protein sequence

MNRSHCNQLQSNSISHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLPRFCPLCFDVYDDSTPPPSHQRVMCFRCPSISHLSCASFRFSSNFLCPLCSDPCFSFFDGFNSGGLCQSESNVAFLAGRSVDGKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYAKTNGDAVAGERTVEEEDSKLPDKGVTTIFDRMKGNQTT

Homology

[Close]

BLAST of Cla021828 vs. TrEMBL
Match: A0A0A0L5G4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171130 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.3e-108
Identity = 197/229 (86.03%), Postives = 208/229 (90.83%), Query Frame = 1


Query: 1   MNRSHCNQLQSNSISHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLPRFCPLCF 60
           MNR H N LQSNSISHCQ+CGISQSACWILHNVR KA+FRRLCTNCVLKHNL RFCPLCF
Sbjct: 66  MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 125

Query: 61  DVYDDSTPPPSHQRVMCFRCPSISHLSCASFRFSSNFLCPLCSDPCFSFFDGFNSGG-LC 120
           DVY+DSTPPPSH RVMCFRCPSISHLSC SFRFSS FLCPLCSDP F FFDGF+SGG LC
Sbjct: 126 DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 185

Query: 121 QSESNVAFLAGRSVDGKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSES VAFLAG++VD KS KAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 186 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 245

Query: 181 ALERLAYLVLQEKDKNGYAKTNGDAVAGERTVEEEDSKLPDKGVTTIFD 229
           ALE+LAYLVLQEKDKNGY+K+NGDAV  ER VEEE+ KL +K VT IFD
Sbjct: 246 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFD 294

[Close]

BLAST of Cla021828 vs. TrEMBL
Match: E5GC39_CUCME (DNA binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 9.2e-102
Identity = 189/222 (85.14%), Postives = 201/222 (90.54%), Query Frame = 1


Query: 1   MNRSHCNQLQSNSISHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLPRFCPLCF 60
           MNR   N LQ+NSISHCQECGISQSACWILHNVR KA+FRRLCTNCVLKHNL RFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYDDSTPPPSHQRVMCFRCPSISHLSCASFRFSSNFLCPLCSDPCFSFFDGFNSG-GLC 120
           DVY+DSTPPPSH RVMC+RCPSISHLSC SFRFSS FLCPLCSDP F FFDGF+SG  L 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESNVAFLAGRSVDGKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSES VAFLAG++VD KS KAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALERLAYLVLQEKDKNGYAKTNGDAVAGERTVEEEDSKLPDK 222
           ALE+LAYLVLQEKDKNGY+K+NGDAVA ER VEEE+ KL +K
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEK 221

[Close]

BLAST of Cla021828 vs. TrEMBL
Match: A0A067JYW7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19088 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.0e-40
Identity = 92/182 (50.55%), Postives = 121/182 (66.48%), Query Frame = 1


Query: 15  SHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLPRFCPLCFDVYDDSTPPPSHQR 74
           S C  CG  +   W+LHNVR +A++RRLCTNC+LK +   FCP CF+VYD+S PP  H+R
Sbjct: 4   SECGGCGGVRR--WVLHNVRHRAAYRRLCTNCILKSHQGLFCPFCFEVYDESLPP--HER 63

Query: 75  VMCFRCPSISHLSCASF---RFSSNFLCPLCSDPCFSFFDGFNSGGLCQSESNVAFLAGR 134
           +MC +CPSISHLSC  +       +FLCP CS P FSFF+          +SN A  +G 
Sbjct: 64  LMCLKCPSISHLSCVPWSHPHSPPSFLCPACSTPNFSFFN---------LDSNNATNSGT 123

Query: 135 SVDGKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALERLAYLVLQE 194
            +D  SA+A++A AR++A SM +AA  AR  AE ++K AA AKK+A  ALERLAYL  +E
Sbjct: 124 PIDKDSARALLAGARIAAVSMAKAATVARVEAERRVKEAALAKKRAREALERLAYLAAKE 172

[Close]

BLAST of Cla021828 vs. TrEMBL
Match: A0A061EQG5_THECC (Translation initiation factor IF-2, putative OS=Theobroma cacao GN=TCM_021495 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.2e-38
Identity = 100/241 (41.49%), Postives = 140/241 (58.09%), Query Frame = 1


Query: 16  HCQECG-ISQSACWILHNVRLKASFRRLCTNCVLKHNLPRFCPLCFDVYDDSTPPPSHQR 75
           H  ECG  S     +LHNVR +AS+RRLCTNCVLK++   FCP+C +V+++S PP  HQR
Sbjct: 5   HQAECGGCSVPGRLLLHNVRYRASYRRLCTNCVLKNHQGLFCPICLEVFNESPPP--HQR 64

Query: 76  VMCFRCPSISHLSCASFRFSSNFLCPLCSDPCFSFFD-------------GFNSGGLCQS 135
           ++C +CPSISHLSC+S    S+F CP CS+P FSFF+               + GG    
Sbjct: 65  LICLKCPSISHLSCSSSSSQSSFTCPPCSNPNFSFFNVDPNITNKKPKSTPDHQGGSNDD 124

Query: 136 ESNVAFLAGRSVDGKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLAL 195
             N      R +D ++AKA++AAA+++A SM +AA  AR  AE ++K A  AKK+A  AL
Sbjct: 125 HDNDK--KKRVIDREAAKALLAAAKIAAASMSKAAAVARVEAERRVKEATLAKKRAKEAL 184

Query: 196 ERLAYLVLQEKDK-----NGYAKTN----GDAVAGERTVEEEDSKLPDKGVTTIFDRMKG 234
           ERLA+L  ++ D+      G  K+       A+A  +T     S LP+KG   ++     
Sbjct: 185 ERLAFLARKDNDRLKSALVGIPKSKTAAAAAAIADPKTNALSPSPLPEKGNNGLYSVSAA 241

[Close]

BLAST of Cla021828 vs. TrEMBL
Match: A0A0D2RGU6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G072500 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-37
Identity = 96/237 (40.51%), Postives = 141/237 (59.49%), Query Frame = 1


Query: 9   LQSNSISHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLPRFCPLCFDVYDDSTP 68
           ++ + +S C  CG  +   ++LHN+R +AS+RRLCTNCVLK++   FCP+C +V+++S  
Sbjct: 1   MKRDQLSECGGCGAPER--FLLHNLRHRASYRRLCTNCVLKNHQGLFCPICLEVFNES-- 60

Query: 69  PPSHQRVMCFRCPSISHLSCASFRFS-SNFLCPLCSDPCFSFF------------DGFNS 128
           PP HQR++C +CPSISHLSC+S   S S+F CP CS+P FSFF            D    
Sbjct: 61  PPPHQRLICLKCPSISHLSCSSSSLSPSSFTCPPCSNPNFSFFNLTPTKKPKSTPDHPPG 120

Query: 129 GGLCQSESNVAFLAGRSVDGKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKK 188
             L   + N      R +D ++AKA++AAA+++A SM +AA  A+  AE ++K A  AKK
Sbjct: 121 STLDGDDDNNKTTNTRVIDKEAAKALLAAAKIAAASMTKAAAVAKVEAERRVKEATLAKK 180

Query: 189 QATLALERLAYLVLQEKDKN-----GYAKTNGDAVAGERTVEEED-----SKLPDKG 223
           +A  ALERLA L  ++ D++     G  K+  DA        + +     S +PDKG
Sbjct: 181 RAKEALERLALLARKDNDRHKSSLVGIPKSKPDAAIAAAADAKANSLSLPSPIPDKG 233

[Close]

BLAST of Cla021828 vs. NCBI nr
Match: gi|700202072|gb|KGN57205.1| (hypothetical protein Csa_3G171130 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 1.9e-108
Identity = 197/229 (86.03%), Postives = 208/229 (90.83%), Query Frame = 1


Query: 1   MNRSHCNQLQSNSISHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLPRFCPLCF 60
           MNR H N LQSNSISHCQ+CGISQSACWILHNVR KA+FRRLCTNCVLKHNL RFCPLCF
Sbjct: 66  MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 125

Query: 61  DVYDDSTPPPSHQRVMCFRCPSISHLSCASFRFSSNFLCPLCSDPCFSFFDGFNSGG-LC 120
           DVY+DSTPPPSH RVMCFRCPSISHLSC SFRFSS FLCPLCSDP F FFDGF+SGG LC
Sbjct: 126 DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 185

Query: 121 QSESNVAFLAGRSVDGKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSES VAFLAG++VD KS KAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 186 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 245

Query: 181 ALERLAYLVLQEKDKNGYAKTNGDAVAGERTVEEEDSKLPDKGVTTIFD 229
           ALE+LAYLVLQEKDKNGY+K+NGDAV  ER VEEE+ KL +K VT IFD
Sbjct: 246 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEKDVTAIFD 294

[Close]

BLAST of Cla021828 vs. NCBI nr
Match: gi|449459790|ref|XP_004147629.1| (PREDICTED: uncharacterized protein LOC101204799 [Cucumis sativus])

HSP 1 Score: 391.3 bits (1004), Expect = 1.2e-105
Identity = 192/222 (86.49%), Postives = 203/222 (91.44%), Query Frame = 1


Query: 1   MNRSHCNQLQSNSISHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLPRFCPLCF 60
           MNR H N LQSNSISHCQ+CGISQSACWILHNVR KA+FRRLCTNCVLKHNL RFCPLCF
Sbjct: 1   MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYDDSTPPPSHQRVMCFRCPSISHLSCASFRFSSNFLCPLCSDPCFSFFDGFNSGG-LC 120
           DVY+DSTPPPSH RVMCFRCPSISHLSC SFRFSS FLCPLCSDP F FFDGF+SGG LC
Sbjct: 61  DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 120

Query: 121 QSESNVAFLAGRSVDGKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSES VAFLAG++VD KS KAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALERLAYLVLQEKDKNGYAKTNGDAVAGERTVEEEDSKLPDK 222
           ALE+LAYLVLQEKDKNGY+K+NGDAV  ER VEEE+ KL +K
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVDSERKVEEEEYKLQEK 222

[Close]

BLAST of Cla021828 vs. NCBI nr
Match: gi|659077036|ref|XP_008438997.1| (PREDICTED: uncharacterized protein LOC103483924 [Cucumis melo])

HSP 1 Score: 386.7 bits (992), Expect = 2.9e-104
Identity = 194/229 (84.72%), Postives = 206/229 (89.96%), Query Frame = 1


Query: 1   MNRSHCNQLQSNSISHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLPRFCPLCF 60
           MNR   N LQ+NSISHCQECGISQSACWILHNVR KA+FRRLCTNCVLKHNL RFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYDDSTPPPSHQRVMCFRCPSISHLSCASFRFSSNFLCPLCSDPCFSFFDGFNSG-GLC 120
           DVY+DSTPPPSH RVMC+RCPSISHLSC SFRFSS FLCPLCSDP F FFDGF+SG  L 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESNVAFLAGRSVDGKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSES VAFLAG++VD KS KAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALERLAYLVLQEKDKNGYAKTNGDAVAGERTVEEEDSKLPDKGVTTIFD 229
           ALE+LAYLVLQEKDKNGY+K+NGDAVA ER VEEE+ KL +K VT IFD
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEKEVTAIFD 228

[Close]

BLAST of Cla021828 vs. NCBI nr
Match: gi|307136200|gb|ADN34038.1| (DNA binding protein [Cucumis melo subsp. melo])

HSP 1 Score: 377.9 bits (969), Expect = 1.3e-101
Identity = 189/222 (85.14%), Postives = 201/222 (90.54%), Query Frame = 1


Query: 1   MNRSHCNQLQSNSISHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLPRFCPLCF 60
           MNR   N LQ+NSISHCQECGISQSACWILHNVR KA+FRRLCTNCVLKHNL RFCPLCF
Sbjct: 1   MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 60

Query: 61  DVYDDSTPPPSHQRVMCFRCPSISHLSCASFRFSSNFLCPLCSDPCFSFFDGFNSG-GLC 120
           DVY+DSTPPPSH RVMC+RCPSISHLSC SFRFSS FLCPLCSDP F FFDGF+SG  L 
Sbjct: 61  DVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGVSLR 120

Query: 121 QSESNVAFLAGRSVDGKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180
           QSES VAFLAG++VD KS KAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL
Sbjct: 121 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 180

Query: 181 ALERLAYLVLQEKDKNGYAKTNGDAVAGERTVEEEDSKLPDK 222
           ALE+LAYLVLQEKDKNGY+K+NGDAVA ER VEEE+ KL +K
Sbjct: 181 ALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHEK 221

[Close]

BLAST of Cla021828 vs. NCBI nr
Match: gi|802706826|ref|XP_012084199.1| (PREDICTED: uncharacterized protein LOC105643628 [Jatropha curcas])

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40
Identity = 92/182 (50.55%), Postives = 121/182 (66.48%), Query Frame = 1


Query: 15  SHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLPRFCPLCFDVYDDSTPPPSHQR 74
           S C  CG  +   W+LHNVR +A++RRLCTNC+LK +   FCP CF+VYD+S PP  H+R
Sbjct: 4   SECGGCGGVRR--WVLHNVRHRAAYRRLCTNCILKSHQGLFCPFCFEVYDESLPP--HER 63

Query: 75  VMCFRCPSISHLSCASF---RFSSNFLCPLCSDPCFSFFDGFNSGGLCQSESNVAFLAGR 134
           +MC +CPSISHLSC  +       +FLCP CS P FSFF+          +SN A  +G 
Sbjct: 64  LMCLKCPSISHLSCVPWSHPHSPPSFLCPACSTPNFSFFN---------LDSNNATNSGT 123

Query: 135 SVDGKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALERLAYLVLQE 194
            +D  SA+A++A AR++A SM +AA  AR  AE ++K AA AKK+A  ALERLAYL  +E
Sbjct: 124 PIDKDSARALLAGARIAAVSMAKAATVARVEAERRVKEAALAKKRAREALERLAYLAAKE 172

The following BLAST results are available for this feature:

BLAST of Cla021828 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5G4_CUCSA	1.3e-108	86.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171130 PE=4 SV=1	[more]
E5GC39_CUCME	9.2e-102	85.14	DNA binding protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A067JYW7_JATCU	2.0e-40	50.55	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19088 PE=4 SV=1	[more]
A0A061EQG5_THECC	3.2e-38	41.49	Translation initiation factor IF-2, putative OS=Theobroma cacao GN=TCM_021495 PE...	[more]
A0A0D2RGU6_GOSRA	1.6e-37	40.51	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G072500 PE=4 SV=1	[more]

BLAST of Cla021828 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202072\|gb\|KGN57205.1\|	1.9e-108	86.03	hypothetical protein Csa_3G171130 [Cucumis sativus]	[more]
gi\|449459790\|ref\|XP_004147629.1\|	1.2e-105	86.49	PREDICTED: uncharacterized protein LOC101204799 [Cucumis sativus]	[more]
gi\|659077036\|ref\|XP_008438997.1\|	2.9e-104	84.72	PREDICTED: uncharacterized protein LOC103483924 [Cucumis melo]	[more]
gi\|307136200\|gb\|ADN34038.1\|	1.3e-101	85.14	DNA binding protein [Cucumis melo subsp. melo]	[more]
gi\|802706826\|ref\|XP_012084199.1\|	2.9e-40	50.55	PREDICTED: uncharacterized protein LOC105643628 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016746	transferase activity, transferring acyl groups
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla021828	Cla021828.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34451	FAMILY NOT NAMED	coord: 1..204 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla021828	Cla97C05G088500	Watermelon (97103) v2	wmwmbB206
Cla021828	Csa3G171130	Cucumber (Chinese Long) v2	cuwmB233
Cla021828	MELO3C006751	Melon (DHL92) v3.5.1	mewmB461
Cla021828	CSPI03G15350	Wild cucumber (PI 183967)	cpiwmB231
Cla021828	Cucsa.252170	Cucumber (Gy14) v1	cgywmB479
Cla021828	CmaCh06G015870	Cucurbita maxima (Rimu)	cmawmB798
Cla021828	CmaCh14G015570	Cucurbita maxima (Rimu)	cmawmB242
Cla021828	CmoCh06G015810	Cucurbita moschata (Rifu)	cmowmB793
Cla021828	CmoCh14G015920	Cucurbita moschata (Rifu)	cmowmB231
Cla021828	Lsi05G013860	Bottle gourd (USVL1VR-Ls)	lsiwmB366
Cla021828	Cp4.1LG08g05540	Cucurbita pepo (Zucchini)	cpewmB845
Cla021828	MELO3C006751.2	Melon (DHL92) v3.6.1	medwmB447
Cla021828	Carg19594	Silver-seed gourd	carwmB0269
Cla021828	Carg25656	Silver-seed gourd	carwmB0738
Cla021828	CsaV3_3G015530	Cucumber (Chinese Long) v3	cucwmB239
Cla021828	Bhi01G000818	Wax gourd	wgowmB201

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla021828	Wax gourd	wgowmB067
Cla021828	Cucurbita moschata (Rifu)	cmowmB341
Cla021828	Watermelon (Charleston Gray)	wcgwmB286
Cla021828	Watermelon (Charleston Gray)	wcgwmB332
Cla021828	Cucurbita pepo (Zucchini)	cpewmB152
Cla021828	Cucurbita pepo (Zucchini)	cpewmB613
Cla021828	Cucumber (Gy14) v2	cgybwmB217
Cla021828	Melon (DHL92) v3.6.1	medwmB094
Cla021828	Silver-seed gourd	carwmB0070
Cla021828	Watermelon (97103) v2	wmwmbB217