CsaV3_3G009290 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G009290
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionethylene-responsive transcription factor ERF071-like
Locationchr3 : 7633746 .. 7635067 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCATCAGACACTCGTTAGAGGTTTAAATAACACCATGTCGTATTTAAGAAGCGGTTTTATTTCATAATCCACAAATCATAAAGAATACAAATACTAAATCTATTTTGAAACTCCATTAAAATATATCAAAGATCCAAAAACCAAACAAAACCCAACACTAATTTGATTAAGATGGGTATATGCCCTTCAAAATATTCACAACTTTTCATCAATATAAAACCCTTCAAATTTCTTCATCTTCTTCTTCAATTCAAACACCAAACAAATTAAAGAAAATCAATCCCACAAAATCCCCATGGCCGCCGGCAGAGAAACCAAGAGATCCGCCACAGTTTCCCGCTGCATCTCACATTCGCAACCCAACAAATCACCCGCACGGAGGTTCGTCGGAGTACGGCAGCGCCCGTCCGGGCGGTGGGTGGCGGAAATAAAAGACTCTTCTCAGAGAGTCCGCCTTTGGTTAGGCACTTACGACACGCCGGAGGAAGCCGCCCGAGCCTACGACGAGGCTGCCATTGCTCTTCGCGGCGAAAACGCAAGGACCAATTTCGTGTCTCCGGCGACCGGTTGGTCACCGGATTCGAAAGTCTCGAACATCGGCGTGTTGAAAGCGAAATTGAGCAAGAATCTGCAGAGTATTATAGCGCGAACGAGCGAACAGAGCAAATCGTTGAAGAACAGAGTGAGCGATCGGTTCACCTTTGGGAATATTTTCAATTTCAGAAGCTATCAGTCGGCAACAATGGCGGATTTGACGGCCATTGATAAGGCTGCTGTACAGCCGAGCATAATTGTACCCCATGTAGAAACCGATCGTTCCGGTTCGTGGGATAGCAGCGATGGCGAGGGAATCCGGCCACTGGGGTTCAGCTCCGATGGGTCGGAGGTGGCGGGAGATTGGTGGGTGGATCGAATATTGGAAGATGATTGTTACAACGAAGGTTTGATGAGTAAGAGATTTAGGGTTTCTTCTTCGGTGGTTGTTCCTCCAACGTTTAGTGGCTCTCCTACCTATGGTGAATGCTAGATTTTCTTAAGCAAATTAAATTGTAATTCCTAGTAACAAAGATGAACACAACTCAACTAGCATAACCTAAACTAATATCGATTCCTAAATTGGAGGGTCGATAGTGATTAAAAAAATTATTAAAGTTGTTTACACCAAATATTTAGTTTAATTGTTTGGAATTGGATTAGGGGATGGAAGTTGAAACTATATGTATATTATTTGAATGAAATATTGAAATATTTGCAAATTATATGTTTGGTGGTCTTAATTAATATAATTCTAAGCTCAATATAAGTATGAGTCTTAATCTT

mRNA sequence

ATGGCCGCCGGCAGAGAAACCAAGAGATCCGCCACAGTTTCCCGCTGCATCTCACATTCGCAACCCAACAAATCACCCGCACGGAGGTTCGTCGGAGTACGGCAGCGCCCGTCCGGGCGGTGGGTGGCGGAAATAAAAGACTCTTCTCAGAGAGTCCGCCTTTGGTTAGGCACTTACGACACGCCGGAGGAAGCCGCCCGAGCCTACGACGAGGCTGCCATTGCTCTTCGCGGCGAAAACGCAAGGACCAATTTCGTGTCTCCGGCGACCGGTTGGTCACCGGATTCGAAAGTCTCGAACATCGGCGTGTTGAAAGCGAAATTGAGCAAGAATCTGCAGAGTATTATAGCGCGAACGAGCGAACAGAGCAAATCGTTGAAGAACAGAGTGAGCGATCGGTTCACCTTTGGGAATATTTTCAATTTCAGAAGCTATCAGTCGGCAACAATGGCGGATTTGACGGCCATTGATAAGGCTGCTGTACAGCCGAGCATAATTGTACCCCATGTAGAAACCGATCGTTCCGGTTCGTGGGATAGCAGCGATGGCGAGGGAATCCGGCCACTGGGGTTCAGCTCCGATGGGTCGGAGGTGGCGGGAGATTGGTGGGTGGATCGAATATTGGAAGATGATTGTTACAACGAAGGTTTGATGAGTAAGAGATTTAGGGTTTCTTCTTCGGTGGTTGTTCCTCCAACGTTTAGTGGCTCTCCTACCTATGGTGAATGCTAG

Coding sequence (CDS)

ATGGCCGCCGGCAGAGAAACCAAGAGATCCGCCACAGTTTCCCGCTGCATCTCACATTCGCAACCCAACAAATCACCCGCACGGAGGTTCGTCGGAGTACGGCAGCGCCCGTCCGGGCGGTGGGTGGCGGAAATAAAAGACTCTTCTCAGAGAGTCCGCCTTTGGTTAGGCACTTACGACACGCCGGAGGAAGCCGCCCGAGCCTACGACGAGGCTGCCATTGCTCTTCGCGGCGAAAACGCAAGGACCAATTTCGTGTCTCCGGCGACCGGTTGGTCACCGGATTCGAAAGTCTCGAACATCGGCGTGTTGAAAGCGAAATTGAGCAAGAATCTGCAGAGTATTATAGCGCGAACGAGCGAACAGAGCAAATCGTTGAAGAACAGAGTGAGCGATCGGTTCACCTTTGGGAATATTTTCAATTTCAGAAGCTATCAGTCGGCAACAATGGCGGATTTGACGGCCATTGATAAGGCTGCTGTACAGCCGAGCATAATTGTACCCCATGTAGAAACCGATCGTTCCGGTTCGTGGGATAGCAGCGATGGCGAGGGAATCCGGCCACTGGGGTTCAGCTCCGATGGGTCGGAGGTGGCGGGAGATTGGTGGGTGGATCGAATATTGGAAGATGATTGTTACAACGAAGGTTTGATGAGTAAGAGATTTAGGGTTTCTTCTTCGGTGGTTGTTCCTCCAACGTTTAGTGGCTCTCCTACCTATGGTGAATGCTAG

Protein sequence

MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDSSDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTYGEC
Homology
[Close]
BLAST of CsaV3_3G009290 vs. NCBI nr
Match: XP_004134337.1 (PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis sativus] >KGN56556.1 hypothetical protein Csa_3G124760 [Cucumis sativus])

HSP 1 Score: 485.3 bits (1248), Expect = 1.2e-133
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180

Query: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240
           SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY
Sbjct: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240

Query: 241 GEC 244
           GEC
Sbjct: 241 GEC 243

[Close]
BLAST of CsaV3_3G009290 vs. NCBI nr
Match: XP_008438105.1 (PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis melo])

HSP 1 Score: 471.1 bits (1211), Expect = 2.3e-129
Identity = 236/243 (97.12%), Postives = 238/243 (97.94%), Query Frame = 0 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGENARTNFVSPA GWSPDSKVSNIGVLKAKLSKNLQSIIARTS
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPAAGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLT IDKAAVQPSIIVPHVETD+SGSWDS
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTTIDKAAVQPSIIVPHVETDQSGSWDS 180

Query: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240
           SDG+G RPLGF SDGSEVAGDWWVDRILEDD YNEGLMSKRFRVSSSVVVPPTFSGSPTY
Sbjct: 181 SDGDGFRPLGFCSDGSEVAGDWWVDRILEDDDYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240

Query: 241 GEC 244
           GEC
Sbjct: 241 GEC 243

[Close]
BLAST of CsaV3_3G009290 vs. NCBI nr
Match: XP_022979590.1 (ethylene-responsive transcription factor CRF2-like [Cucurbita maxima])

HSP 1 Score: 371.7 bits (953), Expect = 1.9e-99
Identity = 193/244 (79.10%), Postives = 207/244 (84.84%), Query Frame = 0 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRE KRSA +S C  HSQP KSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGREPKRSAALSPCQPHSQPTKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGEN RTNFVSPA G S + K+ +IGVLKAKLS    +I ART+
Sbjct: 61  TPEEAARAYDEAAIALRGENTRTNFVSPAIGRSSEQKIPDIGVLKAKLS----NITARTN 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQ  TMAD TA+DK AVQP+IIVPHVETD+  SWD 
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQPVTMADFTAVDKVAVQPTIIVPHVETDQPCSWDG 180

Query: 181 SD--GEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSP 240
           S   G+G + LGFSSDGSE  G+WWVD+IL DD  NE L SKR RVSSSVVVPPTFSGSP
Sbjct: 181 SSGYGDGFQRLGFSSDGSEGGGEWWVDQILGDDYRNEDLKSKRLRVSSSVVVPPTFSGSP 240

Query: 241 TYGE 243
           +YGE
Sbjct: 241 SYGE 240

[Close]
BLAST of CsaV3_3G009290 vs. NCBI nr
Match: XP_023526935.1 (ethylene-responsive transcription factor CRF2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363.6 bits (932), Expect = 5.2e-97
Identity = 191/244 (78.28%), Postives = 205/244 (84.02%), Query Frame = 0 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           M AGRE KRSA +SRC    QP KSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MPAGREPKRSAALSRC----QPTKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGEN RTNFVSPA G S + K+ +IGVLKAKLS    +I ART+
Sbjct: 61  TPEEAARAYDEAAIALRGENTRTNFVSPAIGRSSEQKIPDIGVLKAKLS----NITARTN 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWD- 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQ  TMAD TA+DK AVQP+IIVPHVETD+  SWD 
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQPVTMADFTAVDKVAVQPTIIVPHVETDQPCSWDG 180

Query: 181 -SSDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSP 240
            S DG+G + LGFSSD SE  G+WWVD+IL DD  NE L SKR RVSSSVVVPPTFSGSP
Sbjct: 181 SSGDGDGFQRLGFSSDASEGGGEWWVDQILGDDYRNEDLKSKRLRVSSSVVVPPTFSGSP 236

Query: 241 TYGE 243
           +YGE
Sbjct: 241 SYGE 236

[Close]
BLAST of CsaV3_3G009290 vs. NCBI nr
Match: XP_022147393.1 (ethylene-responsive transcription factor RAP2-11-like [Momordica charantia])

HSP 1 Score: 359.4 bits (921), Expect = 9.8e-96
Identity = 192/249 (77.11%), Postives = 207/249 (83.13%), Query Frame = 0 

Query: 1   MAAGRETKRSA----TVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWL 60
           MAA RETKRSA      +RC S SQP    ARRFVGVRQRPSGRWVAEIKDSSQRVRLWL
Sbjct: 1   MAAVRETKRSAASPSAAARCKSQSQPT---ARRFVGVRQRPSGRWVAEIKDSSQRVRLWL 60

Query: 61  GTYDTPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSII 120
           GTYD+PEEAARAYDEAAIALRGENARTNFVSPA G SP++K S+IGVLKAKLSKNLQ II
Sbjct: 61  GTYDSPEEAARAYDEAAIALRGENARTNFVSPAAGRSPEAKFSDIGVLKAKLSKNLQGII 120

Query: 121 ARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTA--IDKAAVQPSIIVPHVETDR 180
           ARTSEQSKSLK+RVSDRFTF NIFNFRSY+S TMADL A  +DK  VQPSIIVPHVETD 
Sbjct: 121 ARTSEQSKSLKSRVSDRFTFANIFNFRSYESVTMADLKAMDMDKVGVQPSIIVPHVETDE 180

Query: 181 SGSWDSSDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCY-NEGLMSKRFRVSSSVVVPPT 240
             SW S  G+G R LG SSD +E  G+WWVDR+LED  Y +EG+ +KRFRVSSSVVVPPT
Sbjct: 181 PDSWQSGSGDGFRHLGLSSDAAEGGGEWWVDRLLEDGWYCDEGMKNKRFRVSSSVVVPPT 240

Query: 241 FSGSPTYGE 243
           FSGS  YGE
Sbjct: 241 FSGSQNYGE 246

[Close]
BLAST of CsaV3_3G009290 vs. TAIR10
Match: AT5G19790.1 (related to AP2 11)

HSP 1 Score: 99.4 bits (246), Expect = 3.3e-21
Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 0 

Query: 21 QPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGEN 80
          + +K    +FVGVRQRPSG+WVAEIKD++Q++R+WLGT++T EEAARAYDEAA  LRG N
Sbjct: 13 EKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSN 72

Query: 81 ARTNFVS 88
           RTNF +
Sbjct: 73 TRTNFAN 79

[Close]
BLAST of CsaV3_3G009290 vs. TAIR10
Match: AT4G11140.1 (cytokinin response factor 1)

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 0 

Query: 28  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNFVS 87
           R+F GVRQRP G+W AEI+D S+RVR+WLGT+DT EEAA  YD AAI LRG NA  NF  
Sbjct: 85  RKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPP 144

Query: 88  P 89
           P
Sbjct: 145 P 145

[Close]
BLAST of CsaV3_3G009290 vs. TAIR10
Match: AT1G36060.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 86.7 bits (213), Expect = 2.2e-17
Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = 0 

Query: 26  PARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNF 85
           PA+ + GVRQR  G+WVAEI+    R RLWLGT+DT EEAA AYD AA  LRG++AR NF
Sbjct: 139 PAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNF 198

Query: 86  --VSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTSEQ 123
             +   TG SP S     G ++A +   L++I+A    Q
Sbjct: 199 PALRYQTGSSP-SDTGEYGPIQAAVDAKLEAILAEPKNQ 236

[Close]
BLAST of CsaV3_3G009290 vs. TAIR10
Match: AT4G23750.1 (cytokinin response factor 2)

HSP 1 Score: 85.1 bits (209), Expect = 6.5e-17
Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 0 

Query: 5   RETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEE 64
           R  K  +TVS  +S +    +  ++F GVRQRP G+W AEI+D  +RVRLWLGTY+T EE
Sbjct: 98  RAVKSESTVSPVVS-AXXXXTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEE 157

Query: 65  AARAYDEAAIALRGENARTNF 86
           AA  YD AAI LRG +A TNF
Sbjct: 158 AAMVYDNAAIQLRGPDALTNF 177

[Close]
BLAST of CsaV3_3G009290 vs. TAIR10
Match: AT1G80580.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 3.2e-16
Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 0 

Query: 30  FVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNFVSP 89
           F+GVR+RP GRW AEI+D   R R WLGT+DT EEAARAYD AA  LRG  A+TNFV P
Sbjct: 116 FMGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNFVIP 174

[Close]
BLAST of CsaV3_3G009290 vs. Swiss-Prot
Match: sp|A0A1X9PY88|ERN1_LOTJA (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.4e-21
Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 0 

Query: 25  SPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTN 84
           S   +FVGVRQRPSGRWVAEIKD++Q++R+WLGT++T EEAARAYDEAA  LRG N RTN
Sbjct: 30  SNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTN 89

Query: 85  FVSPATGWSP-DSKVSNI 102
           F++  +  SP  S++ N+
Sbjct: 90  FITHVSLDSPLASRIRNL 107

[Close]
BLAST of CsaV3_3G009290 vs. Swiss-Prot
Match: sp|A2Q5W1|ERN1_MEDTR (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.4e-21
Identity = 54/110 (49.09%), Postives = 73/110 (66.36%), Query Frame = 0 

Query: 23  NKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENAR 82
           N +   +FVGVRQRPSGRWVAEIKD++Q++R+WLGT++T EEAARAYDEAA  LRG N R
Sbjct: 32  NSNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTR 91

Query: 83  TNFVSPATGWSP-DSKVSNIGVLKAKLSKNLQSIIARTSEQSKSLKNRVS 132
           TNF++  +  SP  S++ N+   +    K     +A     SK+  +  S
Sbjct: 92  TNFITHVSLDSPLASRIRNLLNNRKGDKKQEDGAVASAPSNSKTTISNTS 141

[Close]
BLAST of CsaV3_3G009290 vs. Swiss-Prot
Match: sp|Q6J9S1|RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.0e-20
Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 0 

Query: 21 QPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGEN 80
          + +K    +FVGVRQRPSG+WVAEIKD++Q++R+WLGT++T EEAARAYDEAA  LRG N
Sbjct: 13 EKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSN 72

Query: 81 ARTNFVS 88
           RTNF +
Sbjct: 73 TRTNFAN 79

[Close]
BLAST of CsaV3_3G009290 vs. Swiss-Prot
Match: sp|A9Y0K8|ERN2_MEDTR (Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=ERN2 PE=1 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-18
Identity = 51/91 (56.04%), Postives = 62/91 (68.13%), Query Frame = 0 

Query: 6  ETKRSATVSRCISHSQPNKSPARR--FVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPE 65
          E K+S    +       NK    R  FVGVRQRPSGR+VAEIKD++Q +R+WLGT++T E
Sbjct: 7  EPKKSLRPKKVNKFKGRNKKSETRDKFVGVRQRPSGRYVAEIKDTTQNIRMWLGTFETAE 66

Query: 66 EAARAYDEAAIALRGENARTNFVSPATGWSP 95
          EAARAYDEAA  LRG   RTNFV+  +  SP
Sbjct: 67 EAARAYDEAATLLRGSKTRTNFVTHVSYDSP 97

[Close]
BLAST of CsaV3_3G009290 vs. Swiss-Prot
Match: sp|A9Y0K9|ERN3_MEDTR (Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=ERN3 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.6e-18
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 29 RFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNF 86
          +FVGVRQR SG+W AEIKD+S+ +R+WLGTY T EEAARAYDEAA  LRG N RTNF
Sbjct: 24 KFVGVRQRASGKWAAEIKDTSKNIRMWLGTYKTAEEAARAYDEAAFLLRGTNTRTNF 80

[Close]
BLAST of CsaV3_3G009290 vs. TrEMBL
Match: tr|A0A0A0L8Z9|A0A0A0L8Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124760 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 7.8e-134
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180

Query: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240
           SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY
Sbjct: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240

Query: 241 GEC 244
           GEC
Sbjct: 241 GEC 243

[Close]
BLAST of CsaV3_3G009290 vs. TrEMBL
Match: tr|A0A1S3AW80|A0A1S3AW80_CUCME (ethylene-responsive transcription factor ERF071-like OS=Cucumis melo OX=3656 GN=LOC103483310 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 1.5e-129
Identity = 236/243 (97.12%), Postives = 238/243 (97.94%), Query Frame = 0 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGENARTNFVSPA GWSPDSKVSNIGVLKAKLSKNLQSIIARTS
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPAAGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLT IDKAAVQPSIIVPHVETD+SGSWDS
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTTIDKAAVQPSIIVPHVETDQSGSWDS 180

Query: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240
           SDG+G RPLGF SDGSEVAGDWWVDRILEDD YNEGLMSKRFRVSSSVVVPPTFSGSPTY
Sbjct: 181 SDGDGFRPLGFCSDGSEVAGDWWVDRILEDDDYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240

Query: 241 GEC 244
           GEC
Sbjct: 241 GEC 243

[Close]
BLAST of CsaV3_3G009290 vs. TrEMBL
Match: tr|A0A2I4DJX7|A0A2I4DJX7_9ROSI (ethylene-responsive transcription factor RAP2-4-like OS=Juglans regia OX=51240 GN=LOC108980874 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.5e-57
Identity = 151/280 (53.93%), Postives = 175/280 (62.50%), Query Frame = 0 

Query: 3   AGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTP 62
           AG ET +    +   +  Q +K  ARRFVGVRQR SGRWVAEIKDSSQRVRLWLGTYDTP
Sbjct: 2   AGAETTKITIAATTNAKFQSSKPVARRFVGVRQRLSGRWVAEIKDSSQRVRLWLGTYDTP 61

Query: 63  EEAARAYDEAAIALRGENARTNF------------VSPATGWSPDSKVSNIGV----LKA 122
           EEAARAYDEAA ALRGENARTNF             SP  G  P       G+    LKA
Sbjct: 62  EEAARAYDEAARALRGENARTNFAVPVNPSSNISGTSPCNGELPSQPDGRHGLSFSSLKA 121

Query: 123 KLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQ-SATMADLTAIDKAAVQPSI 182
           KLSKNLQSI+ARTSE +KS K+RVSD+ TF  IF+FR+YQ      ++   +K AVQPSI
Sbjct: 122 KLSKNLQSIMARTSE-NKSSKSRVSDQSTFAKIFHFRNYQYQGGRMEMNNAEK-AVQPSI 181

Query: 183 IVPHVETDRSGSWDSS-------DGEGIRPLGFSSDGSEVA--------------GDWWV 242
           IVPH+ET+ S SW+SS       +  G R  G  SDGS++               G W +
Sbjct: 182 IVPHMETEPS-SWESSSVSECSAEWIGYRQHGLDSDGSDIGEVSFGRDHGFLDQIGGWNM 241

[Close]
BLAST of CsaV3_3G009290 vs. TrEMBL
Match: tr|A0A2G9HFD5|A0A2G9HFD5_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11121 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.0e-56
Identity = 146/266 (54.89%), Postives = 177/266 (66.54%), Query Frame = 0 

Query: 1   MAAGRETKRSATVSRCISHSQPNKS-PARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTY 60
           MA   +TK + + S      QP KS  ARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTY
Sbjct: 1   MAGCDKTKTTISTSNTNKQQQPAKSAAARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTY 60

Query: 61  DTPEEAARAYDEAAIALRGENARTNF-VSPATGWSPDSKVS-NIGVLKAKLSKNLQSIIA 120
           D+PEEAARAYDEAA ALRGENARTNF  + + G   D+K   +   LKAKLSKNLQSI+A
Sbjct: 61  DSPEEAARAYDEAARALRGENARTNFSAANSNGTESDAKHGLSFSSLKAKLSKNLQSIMA 120

Query: 121 RTSEQSKSLKNRVSDRFTFGNIFNFRSYQS--ATMADLTAIDKAAVQPSIIVPHVETDRS 180
           R SE +K+ K+RVSD FTF +IF+F+ Y        D+  I+K  VQPS+IVPH   + S
Sbjct: 121 RNSE-NKASKSRVSDHFTFASIFHFKGYHQYXXNHVDMKKIEK-VVQPSVIVPHACNEPS 180

Query: 181 GSWD-------SSDGEGIRPLGFSSDGSEVA----------GDWWVDRILEDDCY--NEG 240
            SW+       SS+   ++ LG  SDGSE++          GD  +  I   D    +EG
Sbjct: 181 -SWENSSLSDYSSEWASLKQLGLESDGSEMSDVHSFNEQGIGDQTMGWISSPDAVGGSEG 240

Query: 241 LMSKRFRVSSSVVVPPTFSGSPTYGE 243
             SKRF+VSSSVVVPPTFS SP++G+
Sbjct: 241 SRSKRFKVSSSVVVPPTFSESPSFGD 263

[Close]
BLAST of CsaV3_3G009290 vs. TrEMBL
Match: tr|A0A2C9VT61|A0A2C9VT61_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G040000 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 147/268 (54.85%), Postives = 174/268 (64.93%), Query Frame = 0 

Query: 10  SATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAY 69
           SA  ++  +  QPNK+  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAY
Sbjct: 11  SAATTKTTNMEQPNKA-VRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAY 70

Query: 70  DEAAIALRGENARTNF-------------------VSPATGW---SPDSKVS-NIGVLKA 129
           DEAA ALRGENARTNF                   +SP  G      D + S +   LKA
Sbjct: 71  DEAARALRGENARTNFALVNNXXXXPHYSNTAQSGLSPTNGGLVSESDGRHSLSFSSLKA 130

Query: 130 KLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSII 189
           KLSKNLQSI+ART+E SKS KNRVSD FTF  IF+FRS Q     D+  I+K  VQPSII
Sbjct: 131 KLSKNLQSIMARTTE-SKSTKNRVSDHFTFARIFHFRSQQYQKPVDIKNIEK-VVQPSII 190

Query: 190 VPHVETD-RSGSWD-------SSDGEGIRPLGFSSDGSEVA----GDWWV-DRILEDDCY 241
           VP V  +    SW+       S++  G R  G  SDGS++     GD  + D+++   C 
Sbjct: 191 VPRVANEHEQSSWETSSVSDCSNEWIGFRQQGLDSDGSDIGEVSIGDQGLKDQMMVSGCS 250

The following BLAST results are available for this feature:
BLAST of CsaV3_3G009290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004134337.11.2e-133100.00PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis sativus... [more]
XP_008438105.12.3e-12997.12PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis melo][more]
XP_022979590.11.9e-9979.10ethylene-responsive transcription factor CRF2-like [Cucurbita maxima][more]
XP_023526935.15.2e-9778.28ethylene-responsive transcription factor CRF2-like [Cucurbita pepo subsp. pepo][more]
XP_022147393.19.8e-9677.11ethylene-responsive transcription factor RAP2-11-like [Momordica charantia][more]
BLAST of CsaV3_3G009290 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G19790.13.3e-2165.67related to AP2 11[more]
AT4G11140.11.3e-1767.21cytokinin response factor 1[more]
AT1G36060.12.2e-1749.49Integrase-type DNA-binding superfamily protein[more]
AT4G23750.16.5e-1755.56cytokinin response factor 2[more]
AT1G80580.13.2e-1667.80Integrase-type DNA-binding superfamily protein[more]
BLAST of CsaV3_3G009290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A0A1X9PY88|ERN1_LOTJA5.4e-2162.82Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN... [more]
sp|A2Q5W1|ERN1_MEDTR5.4e-2149.09Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=... [more]
sp|Q6J9S1|RA211_ARATH6.0e-2065.67Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702... [more]
sp|A9Y0K8|ERN2_MEDTR1.1e-1856.04Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=... [more]
sp|A9Y0K9|ERN3_MEDTR5.6e-1873.68Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=... [more]
BLAST of CsaV3_3G009290 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L8Z9|A0A0A0L8Z9_CUCSA7.8e-134100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124760 PE=4 SV=1[more]
tr|A0A1S3AW80|A0A1S3AW80_CUCME1.5e-12997.12ethylene-responsive transcription factor ERF071-like OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A2I4DJX7|A0A2I4DJX7_9ROSI4.5e-5753.93ethylene-responsive transcription factor RAP2-4-like OS=Juglans regia OX=51240 G... [more]
tr|A0A2G9HFD5|A0A2G9HFD5_9LAMI1.0e-5654.89Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11121 P... [more]
tr|A0A2C9VT61|A0A2C9VT61_MANES1.3e-5654.85Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G040000 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G009290.1CsaV3_3G009290.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 30..41
score: 52.27
coord: 52..68
score: 65.45
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 29..91
e-value: 5.9E-34
score: 128.8
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 29..79
e-value: 3.4E-15
score: 55.9
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 29..86
score: 20.495
IPR001471AP2/ERF domainCDDcd00018AP2coord: 29..85
e-value: 2.07312E-30
score: 108.128
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 28..87
e-value: 8.7E-28
score: 97.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..192
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 7..239
NoneNo IPR availablePANTHERPTHR31194:SF7SUBFAMILY NOT NAMEDcoord: 7..239
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 30..85

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G009290CSPI03G09170Wild cucumber (PI 183967)cpicucB144
CsaV3_3G009290Cucsa.258020Cucumber (Gy14) v1cgycucB387
CsaV3_3G009290CmaCh14G020050Cucurbita maxima (Rimu)cmacucB0291
CsaV3_3G009290CmoCh14G020660Cucurbita moschata (Rifu)cmocucB0283
CsaV3_3G009290Cp4.1LG03g17040Cucurbita pepo (Zucchini)cpecucB0759
CsaV3_3G009290CsGy3G009250Cucumber (Gy14) v2cgybcucB117
CsaV3_3G009290Carg14808Silver-seed gourdcarcucB0652
CsaV3_3G009290Cla021270Watermelon (97103) v1cucwmB239
CsaV3_3G009290MELO3C006149Melon (DHL92) v3.5.1cucmeB236
CsaV3_3G009290ClCG05G001890Watermelon (Charleston Gray)cucwcgB225
CsaV3_3G009290Lsi05G020020Bottle gourd (USVL1VR-Ls)cuclsiB228
CsaV3_3G009290MELO3C006149.2Melon (DHL92) v3.6.1cucmedB230
CsaV3_3G009290Cla97C05G082330Watermelon (97103) v2cucwmbB206
CsaV3_3G009290Bhi01G000228Wax gourdcucwgoB291
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G009290Silver-seed gourdcarcucB0524
CsaV3_3G009290Silver-seed gourdcarcucB1127
CsaV3_3G009290Cucumber (Gy14) v2cgybcucB269
CsaV3_3G009290Cucumber (Gy14) v1cgycucB553
CsaV3_3G009290Cucurbita maxima (Rimu)cmacucB0965
CsaV3_3G009290Cucurbita maxima (Rimu)cmacucB1053
CsaV3_3G009290Cucurbita moschata (Rifu)cmocucB0953
CsaV3_3G009290Cucurbita moschata (Rifu)cmocucB1036
CsaV3_3G009290Cucurbita pepo (Zucchini)cpecucB0389
CsaV3_3G009290Cucurbita pepo (Zucchini)cpecucB1056
CsaV3_3G009290Wild cucumber (PI 183967)cpicucB335
CsaV3_3G009290Bottle gourd (USVL1VR-Ls)cuclsiB170
CsaV3_3G009290Melon (DHL92) v3.5.1cucmeB179
CsaV3_3G009290Melon (DHL92) v3.6.1cucmedB170
CsaV3_3G009290Watermelon (Charleston Gray)cucwcgB245
CsaV3_3G009290Watermelon (Charleston Gray)cucwcgB250
CsaV3_3G009290Watermelon (97103) v1cucwmB260
CsaV3_3G009290Watermelon (97103) v1cucwmB285
CsaV3_3G009290Watermelon (97103) v2cucwmbB229
CsaV3_3G009290Cucumber (Chinese Long) v3cuccucB137