CSPI03G09170 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G09170
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionEthylene-responsive transcription factor
LocationChr3 : 7513300 .. 7514208 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAAGATGGGTATATGCCCTTCAAAATATTCACAACTTTTCATCAATATAAAACCCTTCAAATTTCTTCATCTTCTTCTTCAATTCAAACACCAAACAAATTAAAGAAAATCAATCCCACAAAATCCCCATGGCCGCCGGCAGAGAAACCAAGAGATCCGCCACAGTTTCCCGCTGCATCTCACATTCGCAACCCAACAAATCACCCGCACGGAGGTTCGTCGGAGTACGGCAGCGCCCGTCCGGGCGGTGGGTGGCGGAAATAAAAGACTCTTCTCAGAGAGTCCGCCTTTGGTTAGGCACTTACGACACGCCGGAGGAAGCCGCCCGAGCCTACGACGAGGCTGCCATTGCTCTTCGCGGCGAAAACGCAAGGACCAATTTCGTGTCTCCGGCGACCGGTTGGTCACCGGATTCGAAAGTCTCGAACATCGGCGTGTTGAAAGCGAAATTGAGCAAGAATCTGCAGAGTATTATAGCGCGAACGAGCGAACAGAGCAAATCGTTGAAGAACAGAGTGAGCGATCGGTTCACCTTTGGGAATATTTTCAATTTCAGAAGCTATCAGTCGGCAACAATGGCGGATTTGACGGCCATTGATAAGGCTGCTGTACAGCCGAGCATAATTGTACCCCATGTAGAAACCGATCGTTCCGGTTCGTGGGATAGCAGCGATGGCGAGGGAATCCGGCCACTGGGGTTCAGCTCCGATGGGTCGGAGGTGGCGGGAGATTGGTGGGTGGATCGAATATTGGAAGATGATTGTTACAACGAAGGTTTGATGAGTAAGAGATTTAGGGTTTCTTCTTCGGTGGTTGTTCCTCCAACGTTTAGTGGCTCTCCTACCTATGGTGAATGCTAGATTTTCTTAAGCAAATTAAATTGTAATTCCTAGTAACAAAGATGAAC

mRNA sequence

ATGGCCGCCGGCAGAGAAACCAAGAGATCCGCCACAGTTTCCCGCTGCATCTCACATTCGCAACCCAACAAATCACCCGCACGGAGGTTCGTCGGAGTACGGCAGCGCCCGTCCGGGCGGTGGGTGGCGGAAATAAAAGACTCTTCTCAGAGAGTCCGCCTTTGGTTAGGCACTTACGACACGCCGGAGGAAGCCGCCCGAGCCTACGACGAGGCTGCCATTGCTCTTCGCGGCGAAAACGCAAGGACCAATTTCGTGTCTCCGGCGACCGGTTGGTCACCGGATTCGAAAGTCTCGAACATCGGCGTGTTGAAAGCGAAATTGAGCAAGAATCTGCAGAGTATTATAGCGCGAACGAGCGAACAGAGCAAATCGTTGAAGAACAGAGTGAGCGATCGGTTCACCTTTGGGAATATTTTCAATTTCAGAAGCTATCAGTCGGCAACAATGGCGGATTTGACGGCCATTGATAAGGCTGCTGTACAGCCGAGCATAATTGTACCCCATGTAGAAACCGATCGTTCCGGTTCGTGGGATAGCAGCGATGGCGAGGGAATCCGGCCACTGGGGTTCAGCTCCGATGGGTCGGAGGTGGCGGGAGATTGGTGGGTGGATCGAATATTGGAAGATGATTGTTACAACGAAGGTTTGATGAGTAAGAGATTTAGGGTTTCTTCTTCGGTGGTTGTTCCTCCAACGTTTAGTGGCTCTCCTACCTATGGTGAATGCTAG

Coding sequence (CDS)

ATGGCCGCCGGCAGAGAAACCAAGAGATCCGCCACAGTTTCCCGCTGCATCTCACATTCGCAACCCAACAAATCACCCGCACGGAGGTTCGTCGGAGTACGGCAGCGCCCGTCCGGGCGGTGGGTGGCGGAAATAAAAGACTCTTCTCAGAGAGTCCGCCTTTGGTTAGGCACTTACGACACGCCGGAGGAAGCCGCCCGAGCCTACGACGAGGCTGCCATTGCTCTTCGCGGCGAAAACGCAAGGACCAATTTCGTGTCTCCGGCGACCGGTTGGTCACCGGATTCGAAAGTCTCGAACATCGGCGTGTTGAAAGCGAAATTGAGCAAGAATCTGCAGAGTATTATAGCGCGAACGAGCGAACAGAGCAAATCGTTGAAGAACAGAGTGAGCGATCGGTTCACCTTTGGGAATATTTTCAATTTCAGAAGCTATCAGTCGGCAACAATGGCGGATTTGACGGCCATTGATAAGGCTGCTGTACAGCCGAGCATAATTGTACCCCATGTAGAAACCGATCGTTCCGGTTCGTGGGATAGCAGCGATGGCGAGGGAATCCGGCCACTGGGGTTCAGCTCCGATGGGTCGGAGGTGGCGGGAGATTGGTGGGTGGATCGAATATTGGAAGATGATTGTTACAACGAAGGTTTGATGAGTAAGAGATTTAGGGTTTCTTCTTCGGTGGTTGTTCCTCCAACGTTTAGTGGCTCTCCTACCTATGGTGAATGCTAG
Homology
[Close]
BLAST of CSPI03G09170 vs. Swiss-Prot
Match: RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.9e-20
Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 1 

Query: 21 QPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGEN 80
          + +K    +FVGVRQRPSG+WVAEIKD++Q++R+WLGT++T EEAARAYDEAA  LRG N
Sbjct: 13 EKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSN 72

Query: 81 ARTNFVS 88
           RTNF +
Sbjct: 73 TRTNFAN 79

[Close]
BLAST of CSPI03G09170 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.1e-17
Identity = 57/122 (46.72%), Postives = 75/122 (61.48%), Query Frame = 1 

Query: 5   RETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEE 64
           R  K  +TVS  +S +    +  ++F GVRQRP G+W AEI+D  +RVRLWLGTY+T EE
Sbjct: 98  RAVKSESTVSPVVS-ATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEE 157

Query: 65  AARAYDEAAIALRGENARTNF-VSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTSEQS 124
           AA  YD AAI LRG +A TNF V+P T  + + K      +K K  KN +S  + T+  S
Sbjct: 158 AAMVYDNAAIQLRGPDALTNFSVTPTT--ATEKKAPPPSPVKKKKKKNNKSKKSVTASSS 216

Query: 125 KS 126
            S
Sbjct: 218 IS 216

[Close]
BLAST of CSPI03G09170 vs. Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-16
Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 1 

Query: 28  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNFVS 87
           R+F GVRQRP G+W AEI+D S+RVR+WLGT+DT EEAA  YD AAI LRG NA  NF  
Sbjct: 85  RKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPP 144

Query: 88  P 89
           P
Sbjct: 145 P 145

[Close]
BLAST of CSPI03G09170 vs. Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.9e-16
Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = 1 

Query: 26  PARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNF 85
           PA+ + GVRQR  G+WVAEI+    R RLWLGT+DT EEAA AYD AA  LRG++AR NF
Sbjct: 139 PAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNF 198

Query: 86  --VSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTSEQ 123
             +   TG SP S     G ++A +   L++I+A    Q
Sbjct: 199 PALRYQTGSSP-SDTGEYGPIQAAVDAKLEAILAEPKNQ 236

[Close]
BLAST of CSPI03G09170 vs. Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.7e-15
Identity = 43/82 (52.44%), Postives = 53/82 (64.63%), Query Frame = 1 

Query: 12  TVSRCISHSQPNKSPA-----RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAA 71
           T S   S  +PN   +     ++F GVRQRP G+W AEI+D  QR R+WLGT++T EEAA
Sbjct: 102 TQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAA 161

Query: 72  RAYDEAAIALRGENARTNFVSP 89
             YD AAI LRG +A TNF  P
Sbjct: 162 VVYDNAAIRLRGPDALTNFSIP 183

[Close]
BLAST of CSPI03G09170 vs. TrEMBL
Match: A0A0A0L8Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124760 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 4.2e-134
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180

Query: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240
           SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY
Sbjct: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240

Query: 241 GEC 244
           GEC
Sbjct: 241 GEC 243

[Close]
BLAST of CSPI03G09170 vs. TrEMBL
Match: B9IC72_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07280g PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.2e-57
Identity = 152/277 (54.87%), Postives = 176/277 (63.54%), Query Frame = 1 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPA-RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTY 60
           MA     + S TV+   +  Q  K P  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTY
Sbjct: 1   MAEPETLRNSPTVTT--TKVQATKGPTLRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTY 60

Query: 61  DTPEEAARAYDEAAIALRGENARTNF--VSPATGWSPDSKVSNIGV-------------- 120
           DTPEEAARAYDEAA ALRGENARTNF  VSP    S  S  SN G+              
Sbjct: 61  DTPEEAARAYDEAARALRGENARTNFASVSPNLNQSGSSPSSNGGLNMSESDERHGLSFS 120

Query: 121 -LKAKLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQ 180
            LKAKLSKNLQSI+ART+E +KS KNRVSD FTF NIF+FR +Q     D+ +I+K  VQ
Sbjct: 121 SLKAKLSKNLQSIMARTTE-NKSTKNRVSDHFTFANIFHFRGHQYQNPVDMKSIEK-VVQ 180

Query: 181 PSIIVPHVETDR-SGSWD-------SSDGEGIRPLGFSSDGSEVAG----------DWWV 240
           PSIIVPHV   + S SW+       S++  G R  GF SDGS++              WV
Sbjct: 181 PSIIVPHVSDHKPSYSWETSCVSDCSNEWIGFRQHGFDSDGSDIGEVLSTVNADQMIGWV 240

[Close]
BLAST of CSPI03G09170 vs. TrEMBL
Match: A5BB59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011417 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 7.2e-57
Identity = 148/276 (53.62%), Postives = 174/276 (63.04%), Query Frame = 1 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MA+ + T  SA  S   + +QP+K   RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 75  MASTKTT--SAATSTTNTMAQPSKPAVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 134

Query: 61  TPEEAARAYDEAAIALRGENARTNFV-----------SPATGWSPDSKVSNIGV----LK 120
           TPEEAARAYDEAA ALRGENARTNF            SP+ G          G+    LK
Sbjct: 135 TPEEAARAYDEAARALRGENARTNFAPVNPNSYQSGSSPSKGGFVSESEERNGLSFSSLK 194

Query: 121 AKLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSI 180
           AKLSKNLQSI+ARTS+ +KS K+RVSD FTF +IF+ RSY   +  D+ +++K  VQPSI
Sbjct: 195 AKLSKNLQSIMARTSD-NKSSKSRVSDHFTFASIFHSRSYHYQSPVDMKSMEKV-VQPSI 254

Query: 181 IVPHVETDRSGSWDSS-------DGEGIRPLGFSSDGSEVAGD------------WWVDR 240
           IVPHV  + S  W+SS       +  G R  G  SDGS++                W+D 
Sbjct: 255 IVPHVADEPS--WESSSVSDCSTEWVGFRQHGLDSDGSDIGEISASEQGFVDQMMGWIDS 314

Query: 241 ILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTYGE 243
                  +E   SKRF+VSSSVVVPPTFSGSP  GE
Sbjct: 315 PELSISTSEVSRSKRFKVSSSVVVPPTFSGSPYNGE 344

[Close]
BLAST of CSPI03G09170 vs. TrEMBL
Match: A0A067JXK0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14462 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.1e-56
Identity = 141/250 (56.40%), Postives = 162/250 (64.80%), Query Frame = 1 

Query: 27  ARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNFV 86
           ARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAA ALRGENARTNF 
Sbjct: 19  ARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAARALRGENARTNFA 78

Query: 87  SPATGWSPDSKVSN-----------------IGVLKAKLSKNLQSIIARTSEQSKSLKNR 146
           S     + ++  SN                    LKAKLSKNLQ+I+ART+E +KS KNR
Sbjct: 79  SSVNNNNNNNLNSNQSNGGFVSESDGRHGLSFSSLKAKLSKNLQNIMARTTE-TKSTKNR 138

Query: 147 VSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWD-------SSD 206
           VSD FTF +IF+FRS Q     ++  I+K  VQPSIIVPH   D   SW+       S++
Sbjct: 139 VSDHFTFASIFHFRSQQYQKPVNIKNIEK-VVQPSIIVPHA-ADEPSSWETSSVSDCSNE 198

Query: 207 GEGIRPLGFSSDGSEVA----GD--------WWVDRILEDDCYNEGLMSKRFRVSSSVVV 241
             G R LG  SDGS++     GD         W+D      C NEG  SKRF+VSSSVVV
Sbjct: 199 WIGFRQLGLDSDGSDIGEVSIGDGGFSEQMMGWIDSPEISGCSNEGSRSKRFKVSSSVVV 258

[Close]
BLAST of CSPI03G09170 vs. TrEMBL
Match: B9RDK4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1613750 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.8e-55
Identity = 144/268 (53.73%), Postives = 170/268 (63.43%), Query Frame = 1 

Query: 10  SATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAY 69
           +AT ++  + +QPNK   RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAA+AY
Sbjct: 12  AATTAKTTNMAQPNKVAVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAAKAY 71

Query: 70  DEAAIALRGENARTNFVS-PATGWSPDSKVSNIGV--------------LKAKLSKNLQS 129
           DEAA ALRGENARTNF S     +   S  SN G               LKAKLSKNLQS
Sbjct: 72  DEAARALRGENARTNFASVNPNSYHSGSSPSNGGFVSESDGRHSLSFSSLKAKLSKNLQS 131

Query: 130 IIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHV---- 189
           I+ART+E S+S KNRVSD FTF NIF+FRS Q     D+  I+K  VQPSIIVPH     
Sbjct: 132 IMARTTE-SRSTKNRVSDHFTFANIFHFRSQQYQKPVDMKKIEK-VVQPSIIVPHAAENH 191

Query: 190 ETDRSGSWDSSDGE------GIRPLGFSSDGSE-----VAGDWWVDRIL----EDDCYNE 244
           E ++S    SS  +      G R  G  SDGS+     +     VD+++      +   E
Sbjct: 192 ELEQSSLETSSVSDCSNEWIGFRQHGVDSDGSDNGEVSIGDQGLVDQMMCWIESPEIGVE 251

[Close]
BLAST of CSPI03G09170 vs. TAIR10
Match: AT5G19790.1 (AT5G19790.1 related to AP2 11)

HSP 1 Score: 99.4 bits (246), Expect = 3.3e-21
Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 1 

Query: 21 QPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGEN 80
          + +K    +FVGVRQRPSG+WVAEIKD++Q++R+WLGT++T EEAARAYDEAA  LRG N
Sbjct: 13 EKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSN 72

Query: 81 ARTNFVS 88
           RTNF +
Sbjct: 73 TRTNFAN 79

[Close]
BLAST of CSPI03G09170 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2)

HSP 1 Score: 89.4 bits (220), Expect = 3.4e-18
Identity = 57/122 (46.72%), Postives = 75/122 (61.48%), Query Frame = 1 

Query: 5   RETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEE 64
           R  K  +TVS  +S +    +  ++F GVRQRP G+W AEI+D  +RVRLWLGTY+T EE
Sbjct: 98  RAVKSESTVSPVVS-ATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEE 157

Query: 65  AARAYDEAAIALRGENARTNF-VSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTSEQS 124
           AA  YD AAI LRG +A TNF V+P T  + + K      +K K  KN +S  + T+  S
Sbjct: 158 AAMVYDNAAIQLRGPDALTNFSVTPTT--ATEKKAPPPSPVKKKKKKNNKSKKSVTASSS 216

Query: 125 KS 126
            S
Sbjct: 218 IS 216

[Close]
BLAST of CSPI03G09170 vs. TAIR10
Match: AT4G11140.1 (AT4G11140.1 cytokinin response factor 1)

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 1 

Query: 28  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNFVS 87
           R+F GVRQRP G+W AEI+D S+RVR+WLGT+DT EEAA  YD AAI LRG NA  NF  
Sbjct: 85  RKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPP 144

Query: 88  P 89
           P
Sbjct: 145 P 145

[Close]
BLAST of CSPI03G09170 vs. TAIR10
Match: AT1G36060.1 (AT1G36060.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 86.7 bits (213), Expect = 2.2e-17
Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = 1 

Query: 26  PARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNF 85
           PA+ + GVRQR  G+WVAEI+    R RLWLGT+DT EEAA AYD AA  LRG++AR NF
Sbjct: 139 PAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNF 198

Query: 86  --VSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTSEQ 123
             +   TG SP S     G ++A +   L++I+A    Q
Sbjct: 199 PALRYQTGSSP-SDTGEYGPIQAAVDAKLEAILAEPKNQ 236

[Close]
BLAST of CSPI03G09170 vs. TAIR10
Match: AT5G53290.1 (AT5G53290.1 cytokinin response factor 3)

HSP 1 Score: 82.8 bits (203), Expect = 3.2e-16
Identity = 43/82 (52.44%), Postives = 53/82 (64.63%), Query Frame = 1 

Query: 12  TVSRCISHSQPNKSPA-----RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAA 71
           T S   S  +PN   +     ++F GVRQRP G+W AEI+D  QR R+WLGT++T EEAA
Sbjct: 102 TQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAA 161

Query: 72  RAYDEAAIALRGENARTNFVSP 89
             YD AAI LRG +A TNF  P
Sbjct: 162 VVYDNAAIRLRGPDALTNFSIP 183

[Close]
BLAST of CSPI03G09170 vs. NCBI nr
Match: gi|449433103|ref|XP_004134337.1| (PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis sativus])

HSP 1 Score: 485.3 bits (1248), Expect = 6.1e-134
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180

Query: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240
           SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY
Sbjct: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240

Query: 241 GEC 244
           GEC
Sbjct: 241 GEC 243

[Close]
BLAST of CSPI03G09170 vs. NCBI nr
Match: gi|659075362|ref|XP_008438105.1| (PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis melo])

HSP 1 Score: 471.1 bits (1211), Expect = 1.2e-129
Identity = 236/243 (97.12%), Postives = 238/243 (97.94%), Query Frame = 1 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGENARTNFVSPA GWSPDSKVSNIGVLKAKLSKNLQSIIARTS
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPAAGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLT IDKAAVQPSIIVPHVETD+SGSWDS
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTTIDKAAVQPSIIVPHVETDQSGSWDS 180

Query: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240
           SDG+G RPLGF SDGSEVAGDWWVDRILEDD YNEGLMSKRFRVSSSVVVPPTFSGSPTY
Sbjct: 181 SDGDGFRPLGFCSDGSEVAGDWWVDRILEDDDYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240

Query: 241 GEC 244
           GEC
Sbjct: 241 GEC 243

[Close]
BLAST of CSPI03G09170 vs. NCBI nr
Match: gi|224130152|ref|XP_002320765.1| (hypothetical protein POPTR_0014s07280g [Populus trichocarpa])

HSP 1 Score: 229.6 bits (584), Expect = 6.0e-57
Identity = 152/277 (54.87%), Postives = 176/277 (63.54%), Query Frame = 1 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPA-RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTY 60
           MA     + S TV+   +  Q  K P  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTY
Sbjct: 1   MAEPETLRNSPTVTT--TKVQATKGPTLRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTY 60

Query: 61  DTPEEAARAYDEAAIALRGENARTNF--VSPATGWSPDSKVSNIGV-------------- 120
           DTPEEAARAYDEAA ALRGENARTNF  VSP    S  S  SN G+              
Sbjct: 61  DTPEEAARAYDEAARALRGENARTNFASVSPNLNQSGSSPSSNGGLNMSESDERHGLSFS 120

Query: 121 -LKAKLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQ 180
            LKAKLSKNLQSI+ART+E +KS KNRVSD FTF NIF+FR +Q     D+ +I+K  VQ
Sbjct: 121 SLKAKLSKNLQSIMARTTE-NKSTKNRVSDHFTFANIFHFRGHQYQNPVDMKSIEK-VVQ 180

Query: 181 PSIIVPHVETDR-SGSWD-------SSDGEGIRPLGFSSDGSEVAG----------DWWV 240
           PSIIVPHV   + S SW+       S++  G R  GF SDGS++              WV
Sbjct: 181 PSIIVPHVSDHKPSYSWETSCVSDCSNEWIGFRQHGFDSDGSDIGEVLSTVNADQMIGWV 240

[Close]
BLAST of CSPI03G09170 vs. NCBI nr
Match: gi|147781798|emb|CAN65440.1| (hypothetical protein VITISV_011417 [Vitis vinifera])

HSP 1 Score: 228.8 bits (582), Expect = 1.0e-56
Identity = 148/276 (53.62%), Postives = 174/276 (63.04%), Query Frame = 1 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MA+ + T  SA  S   + +QP+K   RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 75  MASTKTT--SAATSTTNTMAQPSKPAVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 134

Query: 61  TPEEAARAYDEAAIALRGENARTNFV-----------SPATGWSPDSKVSNIGV----LK 120
           TPEEAARAYDEAA ALRGENARTNF            SP+ G          G+    LK
Sbjct: 135 TPEEAARAYDEAARALRGENARTNFAPVNPNSYQSGSSPSKGGFVSESEERNGLSFSSLK 194

Query: 121 AKLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSI 180
           AKLSKNLQSI+ARTS+ +KS K+RVSD FTF +IF+ RSY   +  D+ +++K  VQPSI
Sbjct: 195 AKLSKNLQSIMARTSD-NKSSKSRVSDHFTFASIFHSRSYHYQSPVDMKSMEKV-VQPSI 254

Query: 181 IVPHVETDRSGSWDSS-------DGEGIRPLGFSSDGSEVAGD------------WWVDR 240
           IVPHV  + S  W+SS       +  G R  G  SDGS++                W+D 
Sbjct: 255 IVPHVADEPS--WESSSVSDCSTEWVGFRQHGLDSDGSDIGEISASEQGFVDQMMGWIDS 314

Query: 241 ILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTYGE 243
                  +E   SKRF+VSSSVVVPPTFSGSP  GE
Sbjct: 315 PELSISTSEVSRSKRFKVSSSVVVPPTFSGSPYNGE 344

[Close]
BLAST of CSPI03G09170 vs. NCBI nr
Match: gi|731420985|ref|XP_010661581.1| (PREDICTED: ethylene-responsive transcription factor RAP2-13-like [Vitis vinifera])

HSP 1 Score: 228.8 bits (582), Expect = 1.0e-56
Identity = 148/276 (53.62%), Postives = 174/276 (63.04%), Query Frame = 1 

Query: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MA+ + T  SA  S   + +QP+K   RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MASTKTT--SAATSTTNTMAQPSKPAVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFV-----------SPATGWSPDSKVSNIGV----LK 120
           TPEEAARAYDEAA ALRGENARTNF            SP+ G          G+    LK
Sbjct: 61  TPEEAARAYDEAARALRGENARTNFAPVNPNSYQSGSSPSKGGFVSESEERNGLSFSSLK 120

Query: 121 AKLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSI 180
           AKLSKNLQSI+ARTS+ +KS K+RVSD FTF +IF+ RSY   +  D+ +++K  VQPSI
Sbjct: 121 AKLSKNLQSIMARTSD-NKSSKSRVSDHFTFASIFHSRSYHYQSPVDMKSMEKV-VQPSI 180

Query: 181 IVPHVETDRSGSWDSS-------DGEGIRPLGFSSDGSEVAGD------------WWVDR 240
           IVPHV  + S  W+SS       +  G R  G  SDGS++                W+D 
Sbjct: 181 IVPHVADEPS--WESSSVSDCSTEWVGFRQHGLDSDGSDIGEISASEQGFVDQMMGWIDS 240

Query: 241 ILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTYGE 243
                  +E   SKRF+VSSSVVVPPTFSGSP  GE
Sbjct: 241 PELSISTSEVSRSKRFKVSSSVVVPPTFSGSPYNGE 270

The following BLAST results are available for this feature:
BLAST of CSPI03G09170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RA211_ARATH5.9e-2065.67Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2... [more]
CRF2_ARATH6.1e-1746.72Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE... [more]
CRF1_ARATH2.3e-1667.21Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE... [more]
ERF55_ARATH3.9e-1649.49Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF05... [more]
CRF3_ARATH5.7e-1552.44Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE... [more]
BLAST of CSPI03G09170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8Z9_CUCSA4.2e-134100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124760 PE=4 SV=1[more]
B9IC72_POPTR4.2e-5754.87Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07280g PE=4 SV=1[more]
A5BB59_VITVI7.2e-5753.62Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011417 PE=4 SV=1[more]
A0A067JXK0_JATCU2.1e-5656.40Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14462 PE=4 SV=1[more]
B9RDK4_RICCO1.8e-5553.73Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1613750 PE=4 SV=1[more]
BLAST of CSPI03G09170 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G19790.13.3e-2165.67 related to AP2 11[more]
AT4G23750.13.4e-1846.72 cytokinin response factor 2[more]
AT4G11140.11.3e-1767.21 cytokinin response factor 1[more]
AT1G36060.12.2e-1749.49 Integrase-type DNA-binding superfamily protein[more]
AT5G53290.13.2e-1652.44 cytokinin response factor 3[more]
BLAST of CSPI03G09170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433103|ref|XP_004134337.1|6.1e-134100.00PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis sativus... [more]
gi|659075362|ref|XP_008438105.1|1.2e-12997.12PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis melo][more]
gi|224130152|ref|XP_002320765.1|6.0e-5754.87hypothetical protein POPTR_0014s07280g [Populus trichocarpa][more]
gi|147781798|emb|CAN65440.1|1.0e-5653.62hypothetical protein VITISV_011417 [Vitis vinifera][more]
gi|731420985|ref|XP_010661581.1|1.0e-5653.62PREDICTED: ethylene-responsive transcription factor RAP2-13-like [Vitis vinifera... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G09170.1CSPI03G09170.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 30..41
score: 2.1E-7coord: 52..68
score: 2.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 29..86
score: 2.4
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 29..79
score: 2.2
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 29..91
score: 5.9
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 29..86
score: 20
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 30..85
score: 4.25
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 27..181
score: 2.4
NoneNo IPR availablePANTHERPTHR31194:SF7SUBFAMILY NOT NAMEDcoord: 27..181
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G09170Cla021270Watermelon (97103) v1cpiwmB231
CSPI03G09170Csa3G124760Cucumber (Chinese Long) v2cpicuB120
CSPI03G09170MELO3C006149Melon (DHL92) v3.5.1cpimeB230
CSPI03G09170ClCG05G001890Watermelon (Charleston Gray)cpiwcgB226
CSPI03G09170Lsi05G020020Bottle gourd (USVL1VR-Ls)cpilsiB207
CSPI03G09170MELO3C006149.2Melon (DHL92) v3.6.1cpimedB224
CSPI03G09170CsaV3_3G009290Cucumber (Chinese Long) v3cpicucB144
CSPI03G09170Cla97C05G082330Watermelon (97103) v2cpiwmbB209
CSPI03G09170Bhi01G000228Wax gourdcpiwgoB287
CSPI03G09170Cucsa.258020Cucumber (Gy14) v1cgycpiB383
CSPI03G09170CmaCh14G020050Cucurbita maxima (Rimu)cmacpiB255
CSPI03G09170CmoCh14G020660Cucurbita moschata (Rifu)cmocpiB243
CSPI03G09170Cp4.1LG03g17040Cucurbita pepo (Zucchini)cpecpiB611
CSPI03G09170CsGy3G009250Cucumber (Gy14) v2cgybcpiB110
CSPI03G09170Carg14808Silver-seed gourdcarcpiB0651
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G09170Wild cucumber (PI 183967)cpicpiB105
CSPI03G09170Wild cucumber (PI 183967)cpicpiB126
CSPI03G09170Cucumber (Gy14) v1cgycpiB537
CSPI03G09170Cucurbita maxima (Rimu)cmacpiB826
CSPI03G09170Cucurbita maxima (Rimu)cmacpiB906
CSPI03G09170Cucurbita moschata (Rifu)cmocpiB814
CSPI03G09170Cucurbita moschata (Rifu)cmocpiB886
CSPI03G09170Cucumber (Chinese Long) v2cpicuB150
CSPI03G09170Melon (DHL92) v3.5.1cpimeB177
CSPI03G09170Melon (DHL92) v3.5.1cpimeB249
CSPI03G09170Watermelon (Charleston Gray)cpiwcgB250
CSPI03G09170Watermelon (97103) v1cpiwmB251
CSPI03G09170Watermelon (97103) v1cpiwmB278
CSPI03G09170Cucurbita pepo (Zucchini)cpecpiB315
CSPI03G09170Cucurbita pepo (Zucchini)cpecpiB861
CSPI03G09170Bottle gourd (USVL1VR-Ls)cpilsiB153
CSPI03G09170Melon (DHL92) v3.6.1cpimedB168
CSPI03G09170Melon (DHL92) v3.6.1cpimedB246
CSPI03G09170Cucumber (Gy14) v2cgybcpiB264
CSPI03G09170Silver-seed gourdcarcpiB0525
CSPI03G09170Silver-seed gourdcarcpiB1116
CSPI03G09170Cucumber (Chinese Long) v3cpicucB178
CSPI03G09170Watermelon (97103) v2cpiwmbB234