Cla021270 (gene) Watermelon (97103) v1

Overview
NameCla021270
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionEthylene responsive transcription factor 12 (AHRD V1 *-** C0J9I3_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
LocationChr5 : 1728639 .. 1729370 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCGGTAGAGAAACCAAAAGATCCGCCGCTGTTTCCCGATGCATATCACATTCGCAACCCAATAAATCTCCGGCACGGCGGTTTGTCGGTGTCCGGCAGCGGCCGTCCGGCCGGTGGGTGGCGGAAATAAAAGACTCTTCCCAGAGAGTCCGCCTCTGGTTAGGCACTTACGACACGCCGGAGGAAGCCGCCAGAGCCTACGACGAGGCCGCCATTGCTCTCCGCGGCGAAAACGCGAGGACCAATTTCGTGTCTCCGGCGACCGGTCGGTCACCGGATGCGAAGTTTTCCGACCTCGGCGTGTTGAAAGCGAAATTGAGCAAGAATCTGCAGAGTATTATAGCGAGAACGAGCGAACAGAGCAAATCGTTGAAAAACAGAGTGAGTGATCGGTTCACTTTTGGTAATATTTTCAATTTCAGAAGCTATCAATCGGCAACAATGGCGGATTTGACGCCCATTGATAAGGCGGCTGTACAACCGAGCATAATTGTACCTCACATAGAAACCGATCAGCACGGTTCGTGGGATAGCAGCAACGGCGACGGATTCCAGCAACTGGGTTTCAGTTCCGATGGGTCAGAGGCCGCCGGAGATTGGTGGGTGGATCGAATATTGGAAGATGATTATTGTGATGAAGCTTTGAAGAGTAAGAGGTTTAGGGTTTCTTCTTCTGTCGTTGTACCTCCAACTTTTAGTGGTTCTCCTACCTATGGTGAATGTTAG

mRNA sequence

ATGGCCGCCGGTAGAGAAACCAAAAGATCCGCCGCTGTTTCCCGATGCATATCACATTCGCAACCCAATAAATCTCCGGCACGGCGGTTTGTCGGTGTCCGGCAGCGGCCGTCCGGCCGGTGGGTGGCGGAAATAAAAGACTCTTCCCAGAGAGTCCGCCTCTGGTTAGGCACTTACGACACGCCGGAGGAAGCCGCCAGAGCCTACGACGAGGCCGCCATTGCTCTCCGCGGCGAAAACGCGAGGACCAATTTCGTGTCTCCGGCGACCGGTCGGTCACCGGATGCGAAGTTTTCCGACCTCGGCGTGTTGAAAGCGAAATTGAGCAAGAATCTGCAGAGTATTATAGCGAGAACGAGCGAACAGAGCAAATCGTTGAAAAACAGAGTGAGTGATCGGTTCACTTTTGGTAATATTTTCAATTTCAGAAGCTATCAATCGGCAACAATGGCGGATTTGACGCCCATTGATAAGGCGGCTGTACAACCGAGCATAATTGTACCTCACATAGAAACCGATCAGCACGGTTCGTGGGATAGCAGCAACGGCGACGGATTCCAGCAACTGGGTTTCAGTTCCGATGGGTCAGAGGCCGCCGGAGATTGGTGGGTGGATCGAATATTGGAAGATGATTATTGTGATGAAGCTTTGAAGAGTAAGAGGTTTAGGGTTTCTTCTTCTGTCGTTGTACCTCCAACTTTTAGTGGTTCTCCTACCTATGGTGAATGTTAG

Coding sequence (CDS)

ATGGCCGCCGGTAGAGAAACCAAAAGATCCGCCGCTGTTTCCCGATGCATATCACATTCGCAACCCAATAAATCTCCGGCACGGCGGTTTGTCGGTGTCCGGCAGCGGCCGTCCGGCCGGTGGGTGGCGGAAATAAAAGACTCTTCCCAGAGAGTCCGCCTCTGGTTAGGCACTTACGACACGCCGGAGGAAGCCGCCAGAGCCTACGACGAGGCCGCCATTGCTCTCCGCGGCGAAAACGCGAGGACCAATTTCGTGTCTCCGGCGACCGGTCGGTCACCGGATGCGAAGTTTTCCGACCTCGGCGTGTTGAAAGCGAAATTGAGCAAGAATCTGCAGAGTATTATAGCGAGAACGAGCGAACAGAGCAAATCGTTGAAAAACAGAGTGAGTGATCGGTTCACTTTTGGTAATATTTTCAATTTCAGAAGCTATCAATCGGCAACAATGGCGGATTTGACGCCCATTGATAAGGCGGCTGTACAACCGAGCATAATTGTACCTCACATAGAAACCGATCAGCACGGTTCGTGGGATAGCAGCAACGGCGACGGATTCCAGCAACTGGGTTTCAGTTCCGATGGGTCAGAGGCCGCCGGAGATTGGTGGGTGGATCGAATATTGGAAGATGATTATTGTGATGAAGCTTTGAAGAGTAAGAGGTTTAGGGTTTCTTCTTCTGTCGTTGTACCTCCAACTTTTAGTGGTTCTCCTACCTATGGTGAATGTTAG

Protein sequence

MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNFVSPATGRSPDAKFSDLGVLKAKLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSIIVPHIETDQHGSWDSSNGDGFQQLGFSSDGSEAAGDWWVDRILEDDYCDEALKSKRFRVSSSVVVPPTFSGSPTYGEC
Homology
[Close]
BLAST of Cla021270 vs. Swiss-Prot
Match: RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.5e-20
Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 1 

Query: 21 QPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGEN 80
          + +K    +FVGVRQRPSG+WVAEIKD++Q++R+WLGT++T EEAARAYDEAA  LRG N
Sbjct: 13 EKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSN 72

Query: 81 ARTNFVS 88
           RTNF +
Sbjct: 73 TRTNFAN 79

[Close]
BLAST of Cla021270 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.7e-17
Identity = 55/118 (46.61%), Postives = 71/118 (60.17%), Query Frame = 1 

Query: 5   RETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEE 64
           R  K  + VS  +S +    +  ++F GVRQRP G+W AEI+D  +RVRLWLGTY+T EE
Sbjct: 98  RAVKSESTVSPVVS-ATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEE 157

Query: 65  AARAYDEAAIALRGENARTNF-VSPATGRSPDA-KFSDLGVLKAKLSKNLQSIIARTS 121
           AA  YD AAI LRG +A TNF V+P T     A   S +   K K +K+ +S+ A +S
Sbjct: 158 AAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSS 214

[Close]
BLAST of Cla021270 vs. Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.8e-16
Identity = 48/99 (48.48%), Postives = 62/99 (62.63%), Query Frame = 1 

Query: 26  PARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNF 85
           PA+ + GVRQR  G+WVAEI+    R RLWLGT+DT EEAA AYD AA  LRG++AR NF
Sbjct: 139 PAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNF 198

Query: 86  --VSPATGRSPDAKFSDLGVLKAKLSKNLQSIIARTSEQ 123
             +   TG SP +   + G ++A +   L++I+A    Q
Sbjct: 199 PALRYQTGSSP-SDTGEYGPIQAAVDAKLEAILAEPKNQ 236

[Close]
BLAST of Cla021270 vs. Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-16
Identity = 41/61 (67.21%), Postives = 45/61 (73.77%), Query Frame = 1 

Query: 28  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNFVS 87
           R+F GVRQRP G+W AEI+D S+RVR+WLGT+DT EEAA  YD AAI LRG NA  NF  
Sbjct: 85  RKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPP 144

Query: 88  P 89
           P
Sbjct: 145 P 145

[Close]
BLAST of Cla021270 vs. Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.7e-16
Identity = 53/127 (41.73%), Postives = 71/127 (55.91%), Query Frame = 1 

Query: 8   KRSAAVSRCISHSQ--PNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEA 67
           K+S     C ++    P+K P + + GVRQR  G+WVAEI+    R RLWLGT+DT EEA
Sbjct: 129 KQSGVAGSCFAYGSGVPSK-PTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEA 188

Query: 68  ARAYDEAAIALRGENARTNFVS-PATGRSPDAKFSDLGVLKAKLSKNLQSI---IARTSE 127
           A AYD+AA  LRG+ AR NF +    G      F +   L + +   L++I   +A T +
Sbjct: 189 ALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLHSSVDAKLEAICKSMAETQK 248

Query: 128 QSKSLKN 129
           Q KS K+
Sbjct: 249 QDKSTKS 254

[Close]
BLAST of Cla021270 vs. TrEMBL
Match: A0A0A0L8Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124760 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 6.3e-122
Identity = 222/243 (91.36%), Postives = 231/243 (95.06%), Query Frame = 1 

Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRETKRSA VSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGRSPDAKFSDLGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGENARTNFVSPATG SPD+K S++GVLKAKLSKNLQSIIARTS
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSIIVPHIETDQHGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLT IDKAAVQPSIIVPH+ETD+ GSWDS
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180

Query: 181 SNGDGFQQLGFSSDGSEAAGDWWVDRILEDDYCDEALKSKRFRVSSSVVVPPTFSGSPTY 240
           S+G+G + LGFSSDGSE AGDWWVDRILEDD  +E L SKRFRVSSSVVVPPTFSGSPTY
Sbjct: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240

Query: 241 GEC 244
           GEC
Sbjct: 241 GEC 243

[Close]
BLAST of Cla021270 vs. TrEMBL
Match: A5BB59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011417 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.6e-59
Identity = 150/276 (54.35%), Postives = 178/276 (64.49%), Query Frame = 1 

Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MA+ + T  SAA S   + +QP+K   RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 75  MASTKTT--SAATSTTNTMAQPSKPAVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 134

Query: 61  TPEEAARAYDEAAIALRGENARTNFV-----------SPATG----RSPDAKFSDLGVLK 120
           TPEEAARAYDEAA ALRGENARTNF            SP+ G     S +        LK
Sbjct: 135 TPEEAARAYDEAARALRGENARTNFAPVNPNSYQSGSSPSKGGFVSESEERNGLSFSSLK 194

Query: 121 AKLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSI 180
           AKLSKNLQSI+ARTS+ +KS K+RVSD FTF +IF+ RSY   +  D+  ++K  VQPSI
Sbjct: 195 AKLSKNLQSIMARTSD-NKSSKSRVSDHFTFASIFHSRSYHYQSPVDMKSMEK-VVQPSI 254

Query: 181 IVPHIETDQHGSWDSSNGD-------GFQQLGFSSDGSE----AAGD--------WWVDR 240
           IVPH+  +   SW+SS+         GF+Q G  SDGS+    +A +         W+D 
Sbjct: 255 IVPHVADEP--SWESSSVSDCSTEWVGFRQHGLDSDGSDIGEISASEQGFVDQMMGWIDS 314

Query: 241 ILEDDYCDEALKSKRFRVSSSVVVPPTFSGSPTYGE 243
                   E  +SKRF+VSSSVVVPPTFSGSP  GE
Sbjct: 315 PELSISTSEVSRSKRFKVSSSVVVPPTFSGSPYNGE 344

[Close]
BLAST of Cla021270 vs. TrEMBL
Match: V4VY88_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023764mg PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.8e-58
Identity = 150/284 (52.82%), Postives = 171/284 (60.21%), Query Frame = 1 

Query: 3   AGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTP 62
           AG ET ++   +         K  ARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTP
Sbjct: 38  AGSETSKNPTTTNSKGGQATTKPAARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTP 97

Query: 63  EEAARAYDEAAIALRGENARTNFVSPATGRSPD-AKFSDLG------------------- 122
           EEAARAYDEAA ALRGENARTNF S A   + +    SD G                   
Sbjct: 98  EEAARAYDEAARALRGENARTNFASSAVNNNNNPLNHSDSGNSSPCVNGRFVAQSDGRNG 157

Query: 123 ----VLKAKLSKNLQSIIARTSEQS-KSLKNRVSDRFTFGNIFNFRSYQSATMADLTPID 182
                LKAKLSKNLQSI+ARTSE + KS K+RVSD FTF +IF+FRSYQ  T  DL  I+
Sbjct: 158 LSFSSLKAKLSKNLQSIMARTSENNKKSTKSRVSDHFTFASIFHFRSYQYQTPVDLKNIE 217

Query: 183 KAAVQPSIIVPHIETDQH--GSWDSSN---------GDGFQQLGFSSDGSEA-AGD---- 239
           K  VQPSIIVP      H   SW+SS+           GF+Q G  SDG ++  G+    
Sbjct: 218 K-VVQPSIIVPQAADHMHDPSSWESSSTVSDGSSTEWGGFRQHGLDSDGLDSDIGEVVDP 277

[Close]
BLAST of Cla021270 vs. TrEMBL
Match: B9IC72_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07280g PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.1e-57
Identity = 145/257 (56.42%), Postives = 168/257 (65.37%), Query Frame = 1 

Query: 21  QPNKSPA-RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGE 80
           Q  K P  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAA ALRGE
Sbjct: 19  QATKGPTLRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAARALRGE 78

Query: 81  NARTNF--VSPATGRSPDAKFSDLGV---------------LKAKLSKNLQSIIARTSEQ 140
           NARTNF  VSP   +S  +  S+ G+               LKAKLSKNLQSI+ART+E 
Sbjct: 79  NARTNFASVSPNLNQSGSSPSSNGGLNMSESDERHGLSFSSLKAKLSKNLQSIMARTTE- 138

Query: 141 SKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSIIVPHIETDQHG-SWD-- 200
           +KS KNRVSD FTF NIF+FR +Q     D+  I+K  VQPSIIVPH+   +   SW+  
Sbjct: 139 NKSTKNRVSDHFTFANIFHFRGHQYQNPVDMKSIEK-VVQPSIIVPHVSDHKPSYSWETS 198

Query: 201 -----SSNGDGFQQLGFSSDGSEAAG----------DWWVDRILEDDYC-DEALKSKRFR 241
                S+   GF+Q GF SDGS+               WVD    +  C D   +SKR +
Sbjct: 199 CVSDCSNEWIGFRQHGFDSDGSDIGEVLSTVNADQMIGWVDSPDINTCCGDPCSRSKRLK 258

[Close]
BLAST of Cla021270 vs. TrEMBL
Match: B9RDK4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1613750 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-57
Identity = 148/268 (55.22%), Postives = 175/268 (65.30%), Query Frame = 1 

Query: 10  SAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAY 69
           +A  ++  + +QPNK   RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAA+AY
Sbjct: 12  AATTAKTTNMAQPNKVAVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAAKAY 71

Query: 70  DEAAIALRGENARTNFVSP-----ATGRSP---------DAKFS-DLGVLKAKLSKNLQS 129
           DEAA ALRGENARTNF S       +G SP         D + S     LKAKLSKNLQS
Sbjct: 72  DEAARALRGENARTNFASVNPNSYHSGSSPSNGGFVSESDGRHSLSFSSLKAKLSKNLQS 131

Query: 130 IIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSIIVPHI---- 189
           I+ART+E S+S KNRVSD FTF NIF+FRS Q     D+  I+K  VQPSIIVPH     
Sbjct: 132 IMARTTE-SRSTKNRVSDHFTFANIFHFRSQQYQKPVDMKKIEK-VVQPSIIVPHAAENH 191

Query: 190 ETDQHGSWDSSNGD------GFQQLGFSSDGSE----AAGD-WWVDRIL----EDDYCDE 244
           E +Q     SS  D      GF+Q G  SDGS+    + GD   VD+++      +   E
Sbjct: 192 ELEQSSLETSSVSDCSNEWIGFRQHGVDSDGSDNGEVSIGDQGLVDQMMCWIESPEIGVE 251

[Close]
BLAST of Cla021270 vs. NCBI nr
Match: gi|659075362|ref|XP_008438105.1| (PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis melo])

HSP 1 Score: 446.0 bits (1146), Expect = 4.1e-122
Identity = 223/243 (91.77%), Postives = 230/243 (94.65%), Query Frame = 1 

Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRETKRSA VSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGRSPDAKFSDLGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGENARTNFVSPA G SPD+K S++GVLKAKLSKNLQSIIARTS
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPAAGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSIIVPHIETDQHGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLT IDKAAVQPSIIVPH+ETDQ GSWDS
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTTIDKAAVQPSIIVPHVETDQSGSWDS 180

Query: 181 SNGDGFQQLGFSSDGSEAAGDWWVDRILEDDYCDEALKSKRFRVSSSVVVPPTFSGSPTY 240
           S+GDGF+ LGF SDGSE AGDWWVDRILEDD  +E L SKRFRVSSSVVVPPTFSGSPTY
Sbjct: 181 SDGDGFRPLGFCSDGSEVAGDWWVDRILEDDDYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240

Query: 241 GEC 244
           GEC
Sbjct: 241 GEC 243

[Close]
BLAST of Cla021270 vs. NCBI nr
Match: gi|449433103|ref|XP_004134337.1| (PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis sativus])

HSP 1 Score: 444.9 bits (1143), Expect = 9.1e-122
Identity = 222/243 (91.36%), Postives = 231/243 (95.06%), Query Frame = 1 

Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRETKRSA VSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGRSPDAKFSDLGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGENARTNFVSPATG SPD+K S++GVLKAKLSKNLQSIIARTS
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSIIVPHIETDQHGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLT IDKAAVQPSIIVPH+ETD+ GSWDS
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180

Query: 181 SNGDGFQQLGFSSDGSEAAGDWWVDRILEDDYCDEALKSKRFRVSSSVVVPPTFSGSPTY 240
           S+G+G + LGFSSDGSE AGDWWVDRILEDD  +E L SKRFRVSSSVVVPPTFSGSPTY
Sbjct: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSPTY 240

Query: 241 GEC 244
           GEC
Sbjct: 241 GEC 243

[Close]
BLAST of Cla021270 vs. NCBI nr
Match: gi|147781798|emb|CAN65440.1| (hypothetical protein VITISV_011417 [Vitis vinifera])

HSP 1 Score: 236.9 bits (603), Expect = 3.8e-59
Identity = 150/276 (54.35%), Postives = 178/276 (64.49%), Query Frame = 1 

Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MA+ + T  SAA S   + +QP+K   RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 75  MASTKTT--SAATSTTNTMAQPSKPAVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 134

Query: 61  TPEEAARAYDEAAIALRGENARTNFV-----------SPATG----RSPDAKFSDLGVLK 120
           TPEEAARAYDEAA ALRGENARTNF            SP+ G     S +        LK
Sbjct: 135 TPEEAARAYDEAARALRGENARTNFAPVNPNSYQSGSSPSKGGFVSESEERNGLSFSSLK 194

Query: 121 AKLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSI 180
           AKLSKNLQSI+ARTS+ +KS K+RVSD FTF +IF+ RSY   +  D+  ++K  VQPSI
Sbjct: 195 AKLSKNLQSIMARTSD-NKSSKSRVSDHFTFASIFHSRSYHYQSPVDMKSMEK-VVQPSI 254

Query: 181 IVPHIETDQHGSWDSSNGD-------GFQQLGFSSDGSE----AAGD--------WWVDR 240
           IVPH+  +   SW+SS+         GF+Q G  SDGS+    +A +         W+D 
Sbjct: 255 IVPHVADEP--SWESSSVSDCSTEWVGFRQHGLDSDGSDIGEISASEQGFVDQMMGWIDS 314

Query: 241 ILEDDYCDEALKSKRFRVSSSVVVPPTFSGSPTYGE 243
                   E  +SKRF+VSSSVVVPPTFSGSP  GE
Sbjct: 315 PELSISTSEVSRSKRFKVSSSVVVPPTFSGSPYNGE 344

[Close]
BLAST of Cla021270 vs. NCBI nr
Match: gi|731420985|ref|XP_010661581.1| (PREDICTED: ethylene-responsive transcription factor RAP2-13-like [Vitis vinifera])

HSP 1 Score: 236.9 bits (603), Expect = 3.8e-59
Identity = 150/276 (54.35%), Postives = 178/276 (64.49%), Query Frame = 1 

Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MA+ + T  SAA S   + +QP+K   RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MASTKTT--SAATSTTNTMAQPSKPAVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFV-----------SPATG----RSPDAKFSDLGVLK 120
           TPEEAARAYDEAA ALRGENARTNF            SP+ G     S +        LK
Sbjct: 61  TPEEAARAYDEAARALRGENARTNFAPVNPNSYQSGSSPSKGGFVSESEERNGLSFSSLK 120

Query: 121 AKLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSI 180
           AKLSKNLQSI+ARTS+ +KS K+RVSD FTF +IF+ RSY   +  D+  ++K  VQPSI
Sbjct: 121 AKLSKNLQSIMARTSD-NKSSKSRVSDHFTFASIFHSRSYHYQSPVDMKSMEK-VVQPSI 180

Query: 181 IVPHIETDQHGSWDSSNGD-------GFQQLGFSSDGSE----AAGD--------WWVDR 240
           IVPH+  +   SW+SS+         GF+Q G  SDGS+    +A +         W+D 
Sbjct: 181 IVPHVADEP--SWESSSVSDCSTEWVGFRQHGLDSDGSDIGEISASEQGFVDQMMGWIDS 240

Query: 241 ILEDDYCDEALKSKRFRVSSSVVVPPTFSGSPTYGE 243
                   E  +SKRF+VSSSVVVPPTFSGSP  GE
Sbjct: 241 PELSISTSEVSRSKRFKVSSSVVVPPTFSGSPYNGE 270

[Close]
BLAST of Cla021270 vs. NCBI nr
Match: gi|568876806|ref|XP_006491461.1| (PREDICTED: ethylene-responsive transcription factor ERF027-like [Citrus sinensis])

HSP 1 Score: 236.5 bits (602), Expect = 4.9e-59
Identity = 152/286 (53.15%), Postives = 173/286 (60.49%), Query Frame = 1 

Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAG ET ++   +         K  ARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGSETSKNPTTTNSKGGQATTKPAARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGRSPD-AKFSDLG----------------- 120
           TPEEAARAYDEAA ALRGENARTNF S A   + +    SD G                 
Sbjct: 61  TPEEAARAYDEAARALRGENARTNFASSAVNNNNNPLNHSDSGNSSPCVNGRFVAQSDGR 120

Query: 121 ------VLKAKLSKNLQSIIARTSEQS-KSLKNRVSDRFTFGNIFNFRSYQSATMADLTP 180
                  LKAKLSKNLQSI+ARTSE + KS K+RVSD FTF +IF+FRSYQ  T  DL  
Sbjct: 121 NGLSFSSLKAKLSKNLQSIMARTSENNKKSTKSRVSDHFTFASIFHFRSYQYQTPVDLKN 180

Query: 181 IDKAAVQPSIIVPHIETDQH--GSWDSSN---------GDGFQQLGFSSDGSEA-AGD-- 239
           I+K  VQPSIIVP      H   SW+SS+           GF+Q G  SDG ++  G+  
Sbjct: 181 IEK-VVQPSIIVPQAADHMHDPSSWESSSTVSDGSSTEWGGFRQHGLDSDGLDSDIGEVV 240

The following BLAST results are available for this feature:
BLAST of Cla021270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RA211_ARATH4.5e-2065.67Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2... [more]
CRF2_ARATH2.7e-1746.61Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE... [more]
ERF55_ARATH1.8e-1648.48Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF05... [more]
CRF1_ARATH2.3e-1667.21Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE... [more]
RAP24_ARATH6.7e-1641.73Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-... [more]
BLAST of Cla021270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8Z9_CUCSA6.3e-12291.36Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124760 PE=4 SV=1[more]
A5BB59_VITVI2.6e-5954.35Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011417 PE=4 SV=1[more]
V4VY88_9ROSI3.8e-5852.82Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023764mg PE=4 SV=1[more]
B9IC72_POPTR1.1e-5756.42Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07280g PE=4 SV=1[more]
B9RDK4_RICCO1.9e-5755.22Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1613750 PE=4 SV=1[more]
BLAST of Cla021270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075362|ref|XP_008438105.1|4.1e-12291.77PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis melo][more]
gi|449433103|ref|XP_004134337.1|9.1e-12291.36PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis sativus... [more]
gi|147781798|emb|CAN65440.1|3.8e-5954.35hypothetical protein VITISV_011417 [Vitis vinifera][more]
gi|731420985|ref|XP_010661581.1|3.8e-5954.35PREDICTED: ethylene-responsive transcription factor RAP2-13-like [Vitis vinifera... [more]
gi|568876806|ref|XP_006491461.1|4.9e-5953.15PREDICTED: ethylene-responsive transcription factor ERF027-like [Citrus sinensis... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021270Cla021270.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 30..41
score: 2.1E-7coord: 52..68
score: 2.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 29..86
score: 2.4
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 29..79
score: 2.2
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 29..92
score: 4.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 29..86
score: 20
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 30..85
score: 4.25
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 27..182
score: 2.1
NoneNo IPR availablePANTHERPTHR31194:SF7SUBFAMILY NOT NAMEDcoord: 27..182
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla021270Cla97C05G082330Watermelon (97103) v2wmwmbB206
Cla021270Csa3G124760Cucumber (Chinese Long) v2cuwmB233
Cla021270MELO3C006149Melon (DHL92) v3.5.1mewmB461
Cla021270ClCG05G001890Watermelon (Charleston Gray)wcgwmB286
Cla021270CSPI03G09170Wild cucumber (PI 183967)cpiwmB231
Cla021270Cucsa.258020Cucumber (Gy14) v1cgywmB479
Cla021270CmaCh14G020050Cucurbita maxima (Rimu)cmawmB242
Cla021270CmoCh14G020660Cucurbita moschata (Rifu)cmowmB231
Cla021270Lsi05G020020Bottle gourd (USVL1VR-Ls)lsiwmB365
Cla021270Cp4.1LG03g17040Cucurbita pepo (Zucchini)cpewmB613
Cla021270CsGy3G009250Cucumber (Gy14) v2cgybwmB217
Cla021270MELO3C006149.2Melon (DHL92) v3.6.1medwmB447
Cla021270Carg14808Silver-seed gourdcarwmB0617
Cla021270CsaV3_3G009290Cucumber (Chinese Long) v3cucwmB239
Cla021270Bhi01G000228Wax gourdwgowmB214
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla021270Cucumber (Chinese Long) v3cucwmB517
Cla021270Watermelon (97103) v2wmwmbB214
Cla021270Watermelon (97103) v1wmwmB137
Cla021270Cucumber (Gy14) v1cgywmB663
Cla021270Cucurbita maxima (Rimu)cmawmB798
Cla021270Cucurbita maxima (Rimu)cmawmB870
Cla021270Cucurbita moschata (Rifu)cmowmB793
Cla021270Cucurbita moschata (Rifu)cmowmB857
Cla021270Melon (DHL92) v3.5.1mewmB098
Cla021270Watermelon (Charleston Gray)wcgwmB327
Cla021270Cucumber (Chinese Long) v2cuwmB493
Cla021270Cucurbita pepo (Zucchini)cpewmB332
Cla021270Cucurbita pepo (Zucchini)cpewmB845
Cla021270Bottle gourd (USVL1VR-Ls)lsiwmB022
Cla021270Cucumber (Gy14) v2cgybwmB459
Cla021270Melon (DHL92) v3.6.1medwmB096
Cla021270Silver-seed gourdcarwmB0483
Cla021270Silver-seed gourdcarwmB1076