ClCG05G001890 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G001890
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Ethylene-responsive transcription factor
Location	CG_Chr05 : 1803022 .. 1816961 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGGTAGAGAAACCAAAAGATCCGCCGCTGTTTCCCGATGCATATCACATTCGCAACCCAATAAATCTCCGGCACGGCGGTTTGTCGGTGTCCGGCAGCGGCCGTCCGGCCGGTGGGTGGCGGAAATAAAAGACTCTTCCCAGAGAGTCCGCCTCTGGTTAGGCACTTACGACACGCCGGAGGAAGCCGCCAGAGCCTACGACGAGGCCGCCATTGCTCTCCGCGGCGAAAACGCGAGGACCAATTTCGTGTCTCCGGCGACCGGTCGGTCACCGGATGCGAAGTTTTCCGACCTCGGCGTGTTGAAAGCGAAATTGAGCAAGAATCTGCAGAGTATTATAGCGAGAACGAGCGAACAGAGCAAATCGTTGAAAAACAGAGTGAGTGATCGGTTCACTTTTGGTAATATTTTCAATTTCAGAAGCTATCAATCGGCAACAATGGCGGATTTGACGCCCATTGATAAGGCGGCTGTACAACCGAGCATAATTGTACCTCACATAGAAACCGATCAGCACGGTTCGTGGGATAGCAGCAACGGCGACGGATTCCAGCAACTGGGTTTCAGTTCCGATGGGTCAGAGGCCGCCGGAGATTGGTGGGTGGATCGAATATTGGAAGATGATTATTGTGATGAAGCTTTGAAGAGTAAGAGGTTTAGGGTTTCTTCTTCTGTCGTTGTACCTCCAACTTTTAGTGGTTCTCCTACCTATGGTGAATGTTAGATTTTCTTGAGAAAATTAAATTGGGATTAAGGACAATACGACCATAGTTGAATTAGTATAAATTTGTATTGTCAATTTCGAAATTAGTGGCTCAATTTTTCCGCTCTCTACATATTAAGAAAAAAAGATTAAAAAAATGATGGAAGTTGTCGAAATTATGTGTATATTATTTGAATGAAATATCAAAAATATTTGCGTATTGATTACCTCTCTTGTATTTTTAATCTTCATATGATGAAAATGAAAGTATTGGATTATAAGTAACGTGATAGAAAATATTAGAAAATTTTGGTTATCTTCAAGAACGCTAGATATTGCATTAGTTTATATTCTCAATTGATTTCGTATTTGGTTCATTCAAATCGTTCTCCCTAGAATTGTATGTTCAATTTTTATTTTCTTTTTTCTTTTTTGAAAAATTTGTGTGTTCAAATTTAGATGGATTGAAATTAATGGAATAATGAAAGAGTGGTTAACTAATTAGTGTAGTGTAAGTTTAATTTTGTTGATGATTTGTGTGTGCATGTAAGTCAACTGAAATTCATGGGGTAGTTTATAAGTTCTTCTTGCTATTTGTTATCAAGGACATAAATTAACTAAGTTTTAAAATTTTATTTTCCAATAATTTAGTCCAATTTTATTTATGTATTTTTAAAATTGTAATAATTTAATTTTTGAAATTTAATAAGTAACAATTTATTTTCTATATTTTATAATCAAACGATTTAGTTTTTATTATGAAAAATATTATTAAAATTTATTGAAATTTATTACGTAGATCAATAAGTCGATCAATAACCAATTTTTTTAAAGTTAAAAAACATTTTGGTCTCTGAACTTTTCTCGTAAAATTAACGATTTAGTCACTGAACATTGGTTTGTAACGATTTAGTAATATTTTCAATTTTGTAACAAATTAGTCCTTGAACTTTAGTATGTAACAATTTGATCCTTGTACTTTCAAATTTATAGCAATTTAGTCCTTAGCGTAAAAAAATTAGATGTCAATTTTTATTAATTTATCATGTAAACTTTGTATTATATAACAATATTGAGTCTCTAGTTTGTTTATCAGTTTATTTATGCAAAAAAATCTCATTAAATCTTAACACAAATTTTTAGGACTTTTTTTATTTAATAATAAATAATGACAAAAATAGGGTTGGATTGGGTCCACAATTTACCAACATCTCCAGTCCATATGACATGCAATTCGTGGACCGGGTCTATGATTTACCCACATCTCCAGTCGATGTTTGTGAGTGAGGAAAGGAAGCGAGACGAGTAAGAGTGAGAGAGAGAGCGAGAGAGATTAGACTGATTGTGAGTGACGAAAGAAAGCGAGACGAGAGAGAGCGAGAGAGCATGGCAACGTGACAGTTATGGCTGGATTGATCGAGACATGTGAGCAAAATCGTGGACCGCGATTTCATAAAGCCCACACGTGAACAAAATCGTGGACTGGGTCTACTATTTGCATGTCATGTGGGCTAATTTTATGAAATCGTGGACTCCGTCTACGATTTTCCTACCTATTTTTTAAAATACTTTTAACTCTACCATATTTTTGTCATTCTTTATTAAAATAACATTATTTTTTAAAAAATCTTAATTTCTACGACGGGGACTAAATCGTTATAAGTTTTAGAGTACAAAGACTAAATTATTAGGCAGTAAAGTTTATGGATTAAAATGTTACAAAATTAAAAATATGAGGATTAAATCATTATAAACCAAAGTTTATGGATTAAATTATTACTTTTATGAAAGTTTAGGGACTAAAAGTTATTTTTAGTCATTTATTTATAAACTATAAATATTAAGTCGTTACATAATAAAGTTGACACTTAATTTTGAATGGATTTTTCACAATATGGAGTAAATTGTCACATATTTAAAAATAAAGAACTAAATTGTTATAATTCTAGTTTAGAGACTAAATTGATGCAAGTCTGAGAATATAGGGACTAAATCTTTATTAACTCGGTTGAATGAAATTTAGGAACTATATATATATAGGAGTGAGAGCATTGAAATTTCCAAATGACTTCTTCATACACCATTTATGCAATGATGATGCCATAATGGTCTATTGTGAAGACGGCCCCACTACATGTAACTTAATTAAACAAATTACATAATTTTTCATTTGCTTTAATATTATTTTTAATACTTTTCTAATTTTCCCTTGTCCTCATTAATCTTATGTTTGAATTCATGATTTGGACTCAAGGACATTTAGCTTTTTTTGCTTGTATTTTCTAGTTTGGCTATAAGTAGTAACATGACTTTGACTTGGTAAACTATAAACTTAACTCAAACCAATTAATAAATAGTAGCCTAGTAAAACCATGTTAGACCTAAAGAATATAATACAACTATTTAAATAGTAGCACTAGTGCTAGTTAAAAATTAATGATAATAATAATTGTGATGATTTAAGAAAGTATTTATGAGGCATAATGATTAAGTTCTAACATTTAAAGCCAACAAGACTAAATCCTAAGTGGTTGTTTGAGCCCTACTCCATATATGAGGCTCAATTTTACATACAATTGACTATAATATTGAGATTTCAAGTTCCTATTCATTATCGTGTTTACTATTTCCTAGTAATCTCGCATTCCTTCTTGATTACAATGTTTACTATTTCTTACTTATACTAAAATAGTTTGTACCCTAAATAATATTAAAATGGTCTACATGCCAAACACGTACTTATTACTACCTACAGATTATAAGAATCAACTCAGGGTCTCAAATACCCCCCAACTTCCTTCAAGCGATAGAGACCAAATCTGCAAGTTAACCTTGAATATATCAAAAGTCGTCCAATTAACTCAAATGATAACATCTCCTATCCACTAAACTATATTCAAATTAACTGATATTTTTACAAATTAAAAATATGACATCGCAGTCTAAATCAAGAAAATATTTTATATATATATATATAGGAGGATAACATCTCCATTAAATAGGCATTCTATATTAAAAAAAAAAATCGTGAGAGTTTTTATAAATTAAAAATTAGAGAAATATGTGACCTATATTTAATAATAGATAATTTAAAGCTTATTTAGTATTTCATTCCTATTTTTGATTCATTGATTTAAATGAAACTAGTTATTCTCTTACTTGCTGAGTTGATTTTTTAAAATAGTATTTGTATTAATTTTACTTTATAAGTGGAAATTTTTAAATTTAAAACTAATACTCATATCTTATCAAAATTTGGAAAAAAAAAAAACATGAAATATGAGAATTTAGACATCCGACCTTAAAAGAATAATATACGTAAAATTTTCTTTAGTTATGTTCATTTTGAAAAATTTAAAATTAAATTACGTCTTTAATTAAAACTCTTGGTTGCATATCTATGTCTTTTAATCAATAAACAAACACTCAAATTTCTCTATTTTTTCTAAATTCAAATGGATCACTTTTGGAATGATCTCGACATAATAATCTAAATTTTAATTCCTTTTACAATATTAATAACTAATTTCATATATTTTTGGAAATTACATGAATTAACAATAAAAAAAATAAAAAATAAAAATGCCTCGACAAGGGGCTTCCGTTGACTTTGATTTATGACTTTGAGGATTCATTTATGTTATAATGTATTAATAATCATAAGGTCTATTGACTGTCTGCCCCCACAAATATATGACATTGCATTTTTCCATCTCATTGCTTTTTTCATAATTTTATAATAATCTTTTTTGGGGTATTTATCCCCCTACCTTTATTTTTATTCATTAATTCATGTGCTCATTCATCATATTTTTGGGTCCCTATAGTTTTTTTTTTCTTTTTTCCATTTAATATAAATGTATACTTTTTTTTATAGATTATTTTTAAATTAAACACATAAAATTATCTTAAATGACAAAACTGTTAAAAATATTTACAACTAAGAGCAAAATACACATTATCTACGATAAACTACTATAAGTGTCTATCGCGATATATCGTAGATAGACAATGAAATTTTGTTATATTTGTAAATATTTTGGTTACTTTTATTATATTTGAAAAGAGTCCTTAAATATATCAAGGAATTTTGTAAAAATTGGGACCGCTTTCTAATCAATTACTTGACTCCATCTGTCAAAAAAAAAAAAAAACAAAAAAAAAAATCATTTTAGTAAGTTTGTTCAATTTTAGTCATTATACTTTCAATGATCCAAATTTAGTCTCTCTACTTTCAATCAATCTTAAAGTTAGTCCCAATTGCTATTTTATTGTCGGTCTTGTAAAAAGGTTTTGTGTTTTTTTTGTTAAAATAATTTTTTAAAATATATTACATATTGTATTTCTTTTTATGAAAATTATTATTACTATTTAATCGATTTCGTTAAAAACTAATTTTATGATGGACTTGACTTTAAGATTTATGGAAAGTATATGTACTAAAATTGGATAAATTAAAAATATAGGGACTAAAATTGAAATAACTTCTTAAACAGTATTTTAGATAAATAATAATAATAATAATCGACCTCCGACATCCATGTTCTTAAGTCATCCCCTATTATTCTTTTCTATCTCCAATATTCATTTTACATGGACTTTAAAGTAATTATTTACTAGTTTCAATTTAATTAAAAAAATTTTATTAAATAAAAAATAGGTTAAATTTTGAAGGATCAAGTTTGTGTCAAACTTTACCCTTTATTTTGTCTAAAGAGTTCTTGCATCCATTGTGAACCCATGGTTTCTAACATCGGTTTCATCACATATTAACTCCTTACATCGTAGACTCTACAATTTACTCTTTGCCCTCGAACGGCCTCTAAAAAATCTCTAAATTTAGGCCGTGTCTAATAGGTTGTTGAACATTCAATTTTACTCCTAAGAAATCGTTTGAAATTAAAAATTGTCTAACATGTTCCTAACATTCCATTAATTTTTTAATTTTTAATAGATATACTAGATAAAAAAAAATTATATTTAATAAAATTATAAAGTTTTAATTTAGGGTCTAACATGTCTGTAAATTTTTAAAAAATGTTAAAAGTGTTAAGAATTTATTTGGCACAAATTGAAATTTTAAAGACCTCTTGAAAACAAAATTGATAGCTTTATAACTTATAACACTTTATAAAATTAAAAATATTTAGGTCTCATTTGGTAACCATTTGGTTTTTGTTTTTGAAAATTAAGCCTATAGAGACTAATTTCACCTCTAAATTTTTTTATTTTTGTGCCAAAATTTGAAAACTAAAAAAAGTAGCTTTTAAAAAATTATTTTTGTTTTGAAATTTGGCTAAAAATCCAACAATTGTACTTATAAAGTTCATTACAAAAAATGAGAAAAAATAGGTTCAATTTTTAAAAATAAAAAACCAAAATATGAAATAGCTAACAAACGGAGGTAAATAACATAAATCTAAAAAAATTTGAAGACTAAAATAGTAATTTAACATTCAAAATATTCAGTTCACAGTTAGTTTTTCTTTTTTTCTTTTTTTTTTTTTCTGGCTAACATATTCTTTTATTTTTGCTTTAAATCAACCAATTTACATTTGTTTTTGCTTTTATGGAAAGCAAAATAATGTTATTGTTTTCTATTCATTTTGTCATCATTAATAATCTCATTGCAAAAAGAATATATCTTTGTTAGTTTTCATATTATTATTTTCTGCCATTACCTACCACACTATCACAGAGTGGGGATTTGTCTACTTAAAAATGTTATATTATTAAATGCGATTTGAAATATTGTAAATAGAAAGGGAATATATATATATATATTATATATCAACTTAATAAATTAATAATAGAAAAATATTGTGGCATATATTATAATTTATCGCGATATTAAAGTTTTACTATAGTTATAAATATTTTAATTCATTTGACTATATTTAAAAAGAGTCCTTGATAATATATAATTGAAAAAAGAAATCCTTACATCTTTTTATTGAAAATATTCAATTATTATTAGTTCTATTTTGAAGGTCTATATTTAGGTTTTTGATAAAATACAAGAAAATTTTAAATTTGTCTCCAATAAATTTTAAATTTAATTTATTATGTAAATCGATCTTTAATATTATTAACTTATTTCACAAATTTATTATATTTAAAATTAAAAATTTTAATAGTGACTCCAGTTTTAGAAGCATGTGTGTTAGGGGGAATTTTGTACAATTTCTTAATTAAATTCTTAAATAAAAATATCTTAGTTAACCTCTTAACCTCAATTTACAAAAATGAGTAATTTGGAAGGATGAAATTAGTTTTTTCTTTTTTTTATAATTTTGATATTAAAAAAAATCATAATAATTACTATTAAGCTAAATTGATTTAGTCGTATTAAATACTATTTAAATCAATGCTAATATAAAAAATATGACCTATTTAAAAACCTTCTAAAGAAATTAATTAACAATATTCTATAAATTATAGATTAATAAAAGAAAATCTATTACCATTATAACCATTTTAATTACGGCCGAATTTAAAACAATAGTAATCTAACCACGCACGGTATAGTTCTCACACGTGGGGTAAAATGGCTCGTACGGCACATTCATGGGAAATTGGGGCCCACACTTGGTAAAGTTGCCACGTCATTATGTTGATAATGATTGAACTATATAACATTGTTAAAAAATTGCCCAATCTCACCCGTTTCCCGACGAAGATTTAAATCTAGCCGTAGAATATCAGTTTTAATTGATATTTCATGAAAAATCATAAAAATAAAAGATTTTTTTAAATAAATTTAAATTAGCAACTAAACATTTATTATTTTTGATAAATATGTATATTATTTATATTATATTTATATTAGTGGTAGTTTGATGTTTATTTTTTGTGCTATATAGATTTTTCTATGATATAATAGAAATATCGATAAAAATTTATTATTATGTATGAAATTTATTTATTTATTTGAAAAAATAAGATAATAAAATTGTCATTTGGATATAATTTATTTTACTTTAAGCATTTTAAATGTCCAAATTTAATCAAGATGATTAAACTTAATTTGAAATTTTCAAATAATCTCAAAATTAGCTATTATTGTTGGTTTGAAATTCATTTTTTATCGGCCAATATTTTAAAATGTCTTTTTAAAAAATCACATGACAAAAATAAGATGTGGATTTGTATTATTATTATTATTATTATTATTATTATTATTATTATTTTCGCTCTCACAATAATAGTTAAGAAGAGCAAACCATTATTGTTGTGTAAGAAAACGAAAGTAAAAATGATTGAATGTATTCATTTAAATTAAGGACAAATAAATCAATTTTAGGTTTTTTTAAGTAACTCACAGAAAGAAAAAAAAAATAATAGAAAGGACATCGTAGTGATTTGTTGGTTAACTGACATTTTGATTTTAGAAAGAATCTAATAAATTTCTGAATTTGATTTGTTTAGTAAGTTGAGTAACTTTTAATTTTATGTGTAATAAATCATTAGCATATTAAAAATTTAATTTTATGTGTAATAAATTACATTTTAAAAAGACGTGGATTAGATTAAAGACTTATTAGACACACAATTAAAAATTTATAAATTTATTGGACATCAATGTTCAAAATTTAAGTTTCTATTACACATTTTTTAAATTTAGGTATCTATAGTAGAAACTAAATTAAAAATTAATGATTAACAAACCAAATATTTTTTAAGTTGAATGACCAAATTTGTAATTTTTAATTTTCTTAATTTACCTTTTTATTTATTTATTTATTTATATTTTTTTAAGGATTGTTATAGTAATTGTTATCCTCTAATGTTGAGATATTTTTTTTCAGAAAAAAAAAAGAAAAAAAATATTTGTAATCAAATTTTAGAAGTCAATGTTAAACATGATGAAGTAGTAATCATATTTTCCTTCTCACATGCTCCATGCGTATTATAAGGTTGATAAAATAAAGATTTGTTAATATACAATATTTATCAATATTAATTTTAACTTAATCAAATGGTCAATACTATTTATTTATCACAACTATATATTAATAATGAGTATTACTCATGCTTTTAACTTATAAAATTAACTACACCCACCTAATAAATCATCGACAAAACACGTTGATTTAAGTATAATTTCATAGATAAGATACAAATTATTATTCTAAACATTAATAGTTCAATTTTCTACCTTGCGATTCATAAACTAAAAAAATAAAAAAATATGTGTTTTAACCTAACCGTGAGAAAATTGAAAAATTGGTTCTTAAAAAGATGAGAGCAAATGCTCAAATACAATGACTATAATCTTAGGAACGGTTAAATACAACATAAAATTATAATAAGAATTTAAAACTATAAAAAGTCAACAACCACAAAATGATTTTGATTATGTAAAGTGTTATACATAGTTGTTTGTCATCCAAACAATAGAAATTATAAGTTAGTACATTATTACATTTATCCAAGTCAAGATCTCTATACACATTTATCGTTAAAAAAAAAAAAAAAAAACCACCATTAAATTTATCATTATTTATGAAAAAATATTTGAATTTAGAATATGTTGCATGCTGGTTTATCTTTTTATTTGATTTAAAAAAAGATTTAATTTAAATGTAGAAGGAAAAGAATTTGATTGAAATTTTAAAAAGGTTTTGATTTAAATTTAAAACTCGCTAGTCAACTCCTTTTTCTTTTTTCCCCCTCTTGTTCCCTAAATTTAAATTCATTGTAAGTTTTACTTTCCTTTTAAAAATGTACAGCTTCAAAATGCTTTATTATTATTATTTTTTCTCTTTTAAACTACCATAATTATAGGTTTGAAAACTATATATTTTTGTTTTCAAACTTGCAATATTAAAAAACAAAAAAATGAAAAATCCTTATTAACTCATAGATTTGACTCAATGCCAATTATTTAAAATTTAAATAATATTATTTTAATATATGCTAAAAAAATAAAATATTAATGACATTATTCATTAAATATATTAATGGATTACTTTTTAATTATAAACTACTTTTTTTTTTAACACTTATGATTAAAATTATTTAATGAATTAATTTATTAAAATTAAATAAGATTGTCATTTTATTTTTATAAACCAAATAGAAACGTAATTTTATTCATAAAATTATGATAGCATTTTTAATGGACAACCAAATTCTCAAACATCTTATTATGAAGAATATTATTATCAGACACATTATTCTAAGCATATTATTTTTAGATATTATTCTCATCAATCTACAACATTTTAGACCAAACGAATCTTAAAGACCAAAAGTTCTAGGGCGACTTATTGAAAAATTAAACAATAATATACGCTGATCATAAAAAATCTCATTATTTAATAGTATTGTAATATATGGTAAACAAAATAAATTAATAATTTTGAAAAAAGAAATAAATTTAATATAAAACTTATGTGCGTTATTTTATTTCATTTACAGCCTTAGAAAAAAGGGAACAAAAATATCAAAAAAATTTAGGCTATTGTTCATTCAAACATCCATCTTGGCCTCTTCACAACAATCCGGTAGCAAATTATTTGTTTATCAGACAGAATCTCAAGCGACGCGACAGTGGGGCTGACATTTTTTCTCCTACCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATTTTGCTGTGATTTGTGAGCTTCGAAGAAATTTGATTTTTGAATGCGATTGTCCTTTTTGGTGTCTATTTCTGTTAAAAAAGCTCTGCTACTTCTTCCAATTTTTTCAAACTTCGGTTTCTCGATCCTCTGTTTCTCTGTCCTTTCCTTCTTTTGCTGTTCATAGCTTCGTCTTCTTCCAGTCTGATGATTTTTCGACCGTTTTCTTCCCACTTCCCCAAATTAGGAACCAATTTGGCTTCTGGGTTTTCTTGATTCTGTGAAATTGTTTATTGGGTCAGTTCCCCTTTTTTAAATTAGAGTAATGGGTTGTCAAGATCAAGCGATTCAAGCCCTTTCTCTCAATCACTGCTGTTCAAGCCATTTTTAGGTCACTACAAACAGAGAAAATTTCAGGGTATGGTCTGGTTTTAGCCAGTAGCTAATTTCTCACTCTTTGCTTTGAGAGAGAGAAGTTTGCTTTGAAGATCAAGCTTGACTTGGTTTCTTTTCTTGAAGAAGAAGTGTGTAGTTTCTGAGTCTTGAAGGTTTGCCCTTGAAATTTCCCTTGTGCTTGCTTTTTACTTAGTAAAGAAATTAGGATCCCATCTCTTTTTGGTCTTTTCTATTGTGTATAACTAAGTTTTTGCTTCTGTGGCTGGATGTTTGTTTATCTGTGTATTGATGGGCTTCAATGTGTTCTTTACAGGTAAAGGAGAGGCTGAAAGACTACGGAAGGAGAAAGCACTTGGTGGCTGTTTTGAACTTTTGTTAATCATGCTGGAAATCTTCTATTTCTAAAGCAAATCAGATCAGTTCAAGGTATACTTCTTGCTGGACCCATCCGAAGAAAAGAAAAAACAACTTTTTTTTCATAAAAAACAACTCAAGATTCCTACAAATTTGTTCATTAAAGAAAGTAAAAAGTCCCAACACTGTCTTATCTTCAAAGTGAAGTCTCTCTTTCAAGCCAAAATCAGCTAGTTTCCTTGTGATATAAAATGGGAATGAAAAATGGGAGTACAGCTAAGATAGACTCCTCCAACTCATCTCTTTCTTTCTATGTAATTTGAGGCATTAACTATGGATGGGGACCAAATGGCAAAAATAACTTGCCAAACAGGACATCTTCCTGGTCTAAAAAATGAAGCTATGCCTCAGATCCATTCAACCTGAATGGTCCTGTTGTTTCTCCAAACTGCTTATTCAAGTCCTTTGTTTTTCTAATGTTTTAAGGGTTGTGTCTTAAATGCTGACTTCTTTATTGGACGGCTCTGGTTAGCCAAATTGCTTTCCCTTTCAGTCACCTACCTTCTTTATTTATGGTAAAACTTTTATATGGATAGAGAGAAGATAACCCATGTGGCAGCTATACATTACTCTAGTTTTGTGTTTTTTGGTTGTCTGTTCATTGTTTTCAGCACGGTTTTTGAGCTTTCTTTGATCATACAAGATTCTCGAACTTCTTAATATGTGCCTGTTTGAATTTTCTTATTGGCATTTCCTTAACCCTCAACTACAGGTTTTGTGTTTGTATTGCAACTGCTCTAATGCCTTTCGATGCAAATATCGTTGTAATTTGCCTTTTTGTCCTTTGAGTCATTGCTTAAAATGCACTGTTTTGTCTGAATTTGTCCTGTAGTTTAGCACTGTGCTGCTTGATTCGATTCCTATTGGAGAATCATGGTGGAAGATAGTATGAAGGGACGCCCCAGAGACTGTCAGTTGACTGAAGATTGGTTGTTATATGCACAAGAGTTGGTTCCACTGTCACTACAAAAGGCTAGGGAGGTCAAGGTGTTTCCCGGTAGGTGGAAGATGATTATTATCAAGATGGAGCAGATCCCATCTCGTTTATCGGATTTGTCTAGCCACCCCTTTTTCTCCAAGAATGCTCTCTGTAAGGAGCAATTGCAGGCTGTCTCAAAAACGTTGGAAGAAGTAATTGAACTGGCAGAGATCTGTGTGCAGGAAAAATACGAGGGGAAGCTTCGAATGCAGAATGATCTCGACTCTTTATCTGGGAAGTTGGATTTAAATTTGCGAGACTGTGGCCATTTGATCAAGACAGGAGTGCTGAGTGAAGCCACTTTGCCCCTATCTGTAACTGGTACTTCGACCGAACCTGAGTCTACTGACCATAAAAATGTGAGGGAATTGCTTGCCCGGCTTCAGATTGGGCACTTGGAAGCCAAACACAGAGCTCTTGATAGCCTTGTTGAGGTTATGAAAGAGGATGAAAAAACTGTCCTGGCCGTCTTAGGACGTAATAACATTTCTGCTCTAATCCAATTGCTTGCTGCAACATCTCCCTTCATTCGCGAGAAAGCAGCAATGGCAATTTGCTCGATTGTGGAATCACAGAAGTGCGAAAAATGGCTGATTTCAGAGGGAGTTCTGCCACCACTCATACGGCTTGTTGAGTCTGGCAGTGCTCTTTGTAAAGAAAAGGCTACAATTTCCCTCCAAATGCTATCAGCATCAGCTGAAACTGCCCGTGAAATTGTTGGCCATGGAGGAGCTCAGCCGCTGCTCGAAATCTGCCAAACAAGCAATTCTGTGGTGCAGGCGGCAGCTGTGTGCACTTTGAAGAACATGTCAACCATTCCTGAGGTTAGGCAATCTCTAGCTGAAGAAGGAATTGTTCCAGTGATGATAAATCTCCTTGGGAGCGGAATTCTCTTGGAATCAAAAGCTTACGCCGCCGAGTGCTTGCAGAATCTCACTGCAGGCAGTGAAAATCTAAGGAACTCTGTGATTTCAGAAGGTGGCATACAAAGTTTATTAGTTTACATCGATGGCACACTCGCCCAGGAATCTGCTATCGGGGCACTGAGAAATCTAGTCAGCTTGGTTCCAACCGAAGTTGTAACATCTCTTGGTGTTCTTCCGTGTCTACTGCGTGTGCTTAGAAGAGGATCGTTAGGTGCTCAGCAGGCAGCTGCATCAGCAATCTGTGTGGTTAGCAGCTCACCAGAGATGAAAAAGATAATCGGGGAAGCGGGGTTCATTCCTCCACTAGTCAAGATGCTTGAGGCGAAGTCAAACAGTGTCCGAGAAGTGGCAGCGCAAGCAATCGCAAGCTTGATGACTCTGTCCCAAAATTGCAATGAAGTGAAGAAGGATGAGAACAGTGTCCCGAATCTTGTAATGTTGCTTGACTCAAGTCCTCATAACACAGCAAAAAAATATGCTGTTGCCTGCCTTGTAAATCTTGCTTTGAGCAAGAAATGCAAGAAGCTGATGATTTCACATGGAGCAATTGGGTATCTCAAGAAACTTGTAGAAATGGAGGTTCCTAGTGCTAAAAAGCTATTAGAGAGATTGGAAAGAGGGAACTTGAGTATTTTCAGCAGGAAATAAATGAAAAGCGAAGGCGTTACGACGTATGCTCGTGATCAAATGCTCAAGCTAGTTTTGTTGATCTTCACTGTTCAAATCGTTGCGGATTGTATATATTCGAGTACGATCGAAAAGAGCAAACCGGTTTCCTTGTTTGTGAGGATCTGACTGAACAATTGACGTCAACAACAACCCTCTATCTGTTCTCTATTTTCTGTTGGTACATTTTGTGATGAATTCAAGAACAAACTCTGGAATTCTATCTGTATTTATT

mRNA sequence

ATGGCCGCCGGTAGAGAAACCAAAAGATCCGCCGCTGTTTCCCGATGCATATCACATTCGCAACCCAATAAATCTCCGGCACGGCGGTTTGTCGGTGTCCGGCAGCGGCCGTCCGGCCGGTGGGTGGCGGAAATAAAAGACTCTTCCCAGAGAGTCCGCCTCTGGTTAGGCACTTACGACACGCCGGAGGAAGCCGCCAGAGCCTACGACGAGGCCGCCATTGCTCTCCGCGGCGAAAACGCGAGGACCAATTTCGTGTCTCCGGCGACCGGTCGGTCACCGGATGCGAAGTTTTCCGACCTCGGCGTGTTGAAAGCGAAATTGAGCAAGAATCTGCAGAGTATTATAGCGAGAACGAGCGAACAGAGCAAATCGTTGAAAAACAGAGTGAGTGATCGGTTCACTTTTGGTAATATTTTCAATTTCAGAAGCTATCAATCGGCAACAATGGCGGATTTGACGCCCATTGATAAGGCGGCTGTACAACCGAGCATAATTGTACCTCACATAGAAACCGATCAGCACGGTTCGTGGGATAGCAGCAACGGCGACGGATTCCAGCAACTGGGTTTCAGTTCCGATGGGTCAGAGGCCGCCGGAGATTGGTGGGTGGATCGAATATTGGAAGATGATTATTGTGATGAAGCTTTGAAGAGTAAAGGAGAGGCTGAAAGACTACGGAAGGAGAAAGCACTTGGTGGCTGTTTTGAACTTTTGTTAATCATGCTGGAAATCTTCTATTTCTAAAGCAAATCAGATCAGTTCAAGTTTAGCACTGTGCTGCTTGATTCGATTCCTATTGGAGAATCATGGTGGAAGATAGTATGAAGGGACGCCCCAGAGACTGTCAGTTGACTGAAGATTGGTTGTTATATGCACAAGAGTTGGTTCCACTGTCACTACAAAAGGCTAGGGAGGTCAAGGTGTTTCCCGGTAGGTGGAAGATGATTATTATCAAGATGGAGCAGATCCCATCTCGTTTATCGGATTTGTCTAGCCACCCCTTTTTCTCCAAGAATGCTCTCTGTAAGGAGCAATTGCAGGCTGTCTCAAAAACGTTGGAAGAAGTAATTGAACTGGCAGAGATCTGTGTGCAGGAAAAATACGAGGGGAAGCTTCGAATGCAGAATGATCTCGACTCTTTATCTGGGAAGTTGGATTTAAATTTGCGAGACTGTGGCCATTTGATCAAGACAGGAGTGCTGAGTGAAGCCACTTTGCCCCTATCTGTAACTGGTACTTCGACCGAACCTGAGTCTACTGACCATAAAAATGTGAGGGAATTGCTTGCCCGGCTTCAGATTGGGCACTTGGAAGCCAAACACAGAGCTCTTGATAGCCTTGTTGAGGTTATGAAAGAGGATGAAAAAACTGTCCTGGCCGTCTTAGGACGTAATAACATTTCTGCTCTAATCCAATTGCTTGCTGCAACATCTCCCTTCATTCGCGAGAAAGCAGCAATGGCAATTTGCTCGATTGTGGAATCACAGAAGTGCGAAAAATGGCTGATTTCAGAGGGAGTTCTGCCACCACTCATACGGCTTGTTGAGTCTGGCAGTGCTCTTTGTAAAGAAAAGGCTACAATTTCCCTCCAAATGCTATCAGCATCAGCTGAAACTGCCCGTGAAATTGTTGGCCATGGAGGAGCTCAGCCGCTGCTCGAAATCTGCCAAACAAGCAATTCTGTGGTGCAGGCGGCAGCTGTGTGCACTTTGAAGAACATGTCAACCATTCCTGAGGTTAGGCAATCTCTAGCTGAAGAAGGAATTGTTCCAGTGATGATAAATCTCCTTGGGAGCGGAATTCTCTTGGAATCAAAAGCTTACGCCGCCGAGTGCTTGCAGAATCTCACTGCAGGCAGTGAAAATCTAAGGAACTCTGTGATTTCAGAAGGTGGCATACAAAGTTTATTAGTTTACATCGATGGCACACTCGCCCAGGAATCTGCTATCGGGGCACTGAGAAATCTAGTCAGCTTGGTTCCAACCGAAGTTGTAACATCTCTTGGTGTTCTTCCGTGTCTACTGCGTGTGCTTAGAAGAGGATCGTTAGGTGCTCAGCAGGCAGCTGCATCAGCAATCTGTGTGGTTAGCAGCTCACCAGAGATGAAAAAGATAATCGGGGAAGCGGGGTTCATTCCTCCACTAGTCAAGATGCTTGAGGCGAAGTCAAACAGTGTCCGAGAAGTGGCAGCGCAAGCAATCGCAAGCTTGATGACTCTGTCCCAAAATTGCAATGAAGTGAAGAAGGATGAGAACAGTGTCCCGAATCTTGTAATGTTGCTTGACTCAAGTCCTCATAACACAGCAAAAAAATATGCTGTTGCCTGCCTTGTAAATCTTGCTTTGAGCAAGAAATGCAAGAAGCTGATGATTTCACATGGAGCAATTGGGTATCTCAAGAAACTTGTAGAAATGGAGGTTCCTAGTGCTAAAAAGCTATTAGAGAGATTGGAAAGAGGGAACTTGAGTATTTTCAGCAGGAAATAAATGAAAAGCGAAGGCGTTACGACGTATGCTCGTGATCAAATGCTCAAGCTAGTTTTGTTGATCTTCACTGTTCAAATCGTTGCGGATTGTATATATTCGAGTACGATCGAAAAGAGCAAACCGGTTTCCTTGTTTGTGAGGATCTGACTGAACAATTGACGTCAACAACAACCCTCTATCTGTTCTCTATTTTCTGTTGGTACATTTTGTGATGAATTCAAGAACAAACTCTGGAATTCTATCTGTATTTATT

Coding sequence (CDS)

ATGGCCGCCGGTAGAGAAACCAAAAGATCCGCCGCTGTTTCCCGATGCATATCACATTCGCAACCCAATAAATCTCCGGCACGGCGGTTTGTCGGTGTCCGGCAGCGGCCGTCCGGCCGGTGGGTGGCGGAAATAAAAGACTCTTCCCAGAGAGTCCGCCTCTGGTTAGGCACTTACGACACGCCGGAGGAAGCCGCCAGAGCCTACGACGAGGCCGCCATTGCTCTCCGCGGCGAAAACGCGAGGACCAATTTCGTGTCTCCGGCGACCGGTCGGTCACCGGATGCGAAGTTTTCCGACCTCGGCGTGTTGAAAGCGAAATTGAGCAAGAATCTGCAGAGTATTATAGCGAGAACGAGCGAACAGAGCAAATCGTTGAAAAACAGAGTGAGTGATCGGTTCACTTTTGGTAATATTTTCAATTTCAGAAGCTATCAATCGGCAACAATGGCGGATTTGACGCCCATTGATAAGGCGGCTGTACAACCGAGCATAATTGTACCTCACATAGAAACCGATCAGCACGGTTCGTGGGATAGCAGCAACGGCGACGGATTCCAGCAACTGGGTTTCAGTTCCGATGGGTCAGAGGCCGCCGGAGATTGGTGGGTGGATCGAATATTGGAAGATGATTATTGTGATGAAGCTTTGAAGAGTAAAGGAGAGGCTGAAAGACTACGGAAGGAGAAAGCACTTGGTGGCTGTTTTGAACTTTTGTTAATCATGCTGGAAATCTTCTATTTCTAA

Protein sequence

MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNFVSPATGRSPDAKFSDLGVLKAKLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSIIVPHIETDQHGSWDSSNGDGFQQLGFSSDGSEAAGDWWVDRILEDDYCDEALKSKGEAERLRKEKALGGCFELLLIMLEIFYF

Homology

[Close]

BLAST of ClCG05G001890 vs. Swiss-Prot
Match: RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.1e-20
Identity = 69/209 (33.01%), Postives = 98/209 (46.89%), Query Frame = 1


Query: 21  QPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGEN 80
           + +K    +FVGVRQRPSG+WVAEIKD++Q++R+WLGT++T EEAARAYDEAA  LRG N
Sbjct: 13  EKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSN 72

Query: 81  ARTNFVSPATGRSPDAKFSDLGVLKAKLSKNLQSIIARTSEQSKSLKNRVSDRFTF-GNI 140
            RTNF +           S L +    L    QS+  +  +Q K + +       +    
Sbjct: 73  TRTNFANHFPNN------SQLSLKIRNLLHQKQSMKQQQQQQHKPVSSLTDCNINYISTA 132

Query: 141 FNFRSYQSATMADLTPIDKAAVQPSIIVPHIETD---QHGSWDSSNGDGFQQLGFSSDGS 200
            +  +  + T     P++      S ++   ET+      SW   +G    Q+  +  G 
Sbjct: 133 TSLTTTTTTTTTTAIPLNNVYRPDSSVIGQPETEGLQLPYSWPLVSGFN-HQIPLAQAGG 192

Query: 201 EAAGDWWVDRILEDDYCDEALKSKGEAER 226
           E  G       L D Y  +      E ER
Sbjct: 193 ETHGH------LNDHYSTDQHLGLAEIER 208

[Close]

BLAST of ClCG05G001890 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-17
Identity = 55/118 (46.61%), Postives = 71/118 (60.17%), Query Frame = 1


Query: 5   RETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEE 64
           R  K  + VS  +S +    +  ++F GVRQRP G+W AEI+D  +RVRLWLGTY+T EE
Sbjct: 98  RAVKSESTVSPVVS-ATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEE 157

Query: 65  AARAYDEAAIALRGENARTNF-VSPATGRSPDA-KFSDLGVLKAKLSKNLQSIIARTS 121
           AA  YD AAI LRG +A TNF V+P T     A   S +   K K +K+ +S+ A +S
Sbjct: 158 AAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSS 214

[Close]

BLAST of ClCG05G001890 vs. Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.8e-16
Identity = 48/99 (48.48%), Postives = 62/99 (62.63%), Query Frame = 1


Query: 26  PARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNF 85
           PA+ + GVRQR  G+WVAEI+    R RLWLGT+DT EEAA AYD AA  LRG++AR NF
Sbjct: 139 PAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNF 198

Query: 86  --VSPATGRSPDAKFSDLGVLKAKLSKNLQSIIARTSEQ 123
             +   TG SP +   + G ++A +   L++I+A    Q
Sbjct: 199 PALRYQTGSSP-SDTGEYGPIQAAVDAKLEAILAEPKNQ 236

[Close]

BLAST of ClCG05G001890 vs. Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.4e-16
Identity = 41/61 (67.21%), Postives = 45/61 (73.77%), Query Frame = 1


Query: 28  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNFVS 87
           R+F GVRQRP G+W AEI+D S+RVR+WLGT+DT EEAA  YD AAI LRG NA  NF  
Sbjct: 85  RKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPP 144

Query: 88  P 89
           P
Sbjct: 145 P 145

[Close]

BLAST of ClCG05G001890 vs. Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.8e-16
Identity = 53/127 (41.73%), Postives = 71/127 (55.91%), Query Frame = 1


Query: 8   KRSAAVSRCISHSQ--PNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEA 67
           K+S     C ++    P+K P + + GVRQR  G+WVAEI+    R RLWLGT+DT EEA
Sbjct: 129 KQSGVAGSCFAYGSGVPSK-PTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEA 188

Query: 68  ARAYDEAAIALRGENARTNFVS-PATGRSPDAKFSDLGVLKAKLSKNLQSI---IARTSE 127
           A AYD+AA  LRG+ AR NF +    G      F +   L + +   L++I   +A T +
Sbjct: 189 ALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLHSSVDAKLEAICKSMAETQK 248

Query: 128 QSKSLKN 129
           Q KS K+
Sbjct: 249 QDKSTKS 254

[Close]

BLAST of ClCG05G001890 vs. TrEMBL
Match: A0A0A0L8Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124760 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 9.1e-108
Identity = 199/220 (90.45%), Postives = 208/220 (94.55%), Query Frame = 1


Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRETKRSA VSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGRSPDAKFSDLGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGENARTNFVSPATG SPD+K S++GVLKAKLSKNLQSIIARTS
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSIIVPHIETDQHGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLT IDKAAVQPSIIVPH+ETD+ GSWDS
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180

Query: 181 SNGDGFQQLGFSSDGSEAAGDWWVDRILEDDYCDEALKSK 221
           S+G+G + LGFSSDGSE AGDWWVDRILEDD  +E L SK
Sbjct: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSK 220

[Close]

BLAST of ClCG05G001890 vs. TrEMBL
Match: A0A067H4Y1_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g037119mg PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50
Identity = 129/234 (55.13%), Postives = 145/234 (61.97%), Query Frame = 1


Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAG ET ++   +         K  ARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGSETSKNPTTTNSKGGQATTKPAARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGRSPD-AKFSDLG----------------- 120
           TPEEAARAYDEAA ALRGENARTNF S A   + +    SD G                 
Sbjct: 61  TPEEAARAYDEAARALRGENARTNFASSAVNNNNNPLNHSDSGNSSPCVNGRFVAQSDGR 120

Query: 121 ------VLKAKLSKNLQSIIARTSEQS-KSLKNRVSDRFTFGNIFNFRSYQSATMADLTP 180
                  LKAKLSKNLQSI+ARTSE + KS K+RVSD FTF +IF+FRSYQ  T  DL  
Sbjct: 121 NGLSFSSLKAKLSKNLQSIMARTSENNKKSTKSRVSDHFTFASIFHFRSYQYQTPVDLKN 180

Query: 181 IDKAAVQPSIIVPHIETDQH--GSWDSSN---------GDGFQQLGFSSDGSEA 199
           I+K  VQPSIIVP      H   SW+SS+           GF+Q G  SDG ++
Sbjct: 181 IEK-VVQPSIIVPQAADHMHDPSSWESSSTVSDGSSTEWGGFRQHGLDSDGLDS 233

[Close]

BLAST of ClCG05G001890 vs. TrEMBL
Match: A5BB59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011417 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.6e-50
Identity = 133/257 (51.75%), Postives = 163/257 (63.42%), Query Frame = 1


Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MA+ + T  SAA S   + +QP+K   RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 75  MASTKTT--SAATSTTNTMAQPSKPAVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 134

Query: 61  TPEEAARAYDEAAIALRGENARTNFV-----------SPATG----RSPDAKFSDLGVLK 120
           TPEEAARAYDEAA ALRGENARTNF            SP+ G     S +        LK
Sbjct: 135 TPEEAARAYDEAARALRGENARTNFAPVNPNSYQSGSSPSKGGFVSESEERNGLSFSSLK 194

Query: 121 AKLSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSI 180
           AKLSKNLQSI+ARTS+ +KS K+RVSD FTF +IF+ RSY   +  D+  ++K  VQPSI
Sbjct: 195 AKLSKNLQSIMARTSD-NKSSKSRVSDHFTFASIFHSRSYHYQSPVDMKSMEK-VVQPSI 254

Query: 181 IVPHIETDQHGSWDSSNGD-------GFQQLGFSSDGSE-----AAGDWWVDRILEDDYC 231
           IVPH+  +   SW+SS+         GF+Q G  SDGS+     A+   +VD+++     
Sbjct: 255 IVPHVADEP--SWESSSVSDCSTEWVGFRQHGLDSDGSDIGEISASEQGFVDQMMGWIDS 314

[Close]

BLAST of ClCG05G001890 vs. TrEMBL
Match: B9RDK4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1613750 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49
Identity = 126/213 (59.15%), Postives = 143/213 (67.14%), Query Frame = 1


Query: 10  SAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAY 69
           +A  ++  + +QPNK   RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAA+AY
Sbjct: 12  AATTAKTTNMAQPNKVAVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAAKAY 71

Query: 70  DEAAIALRGENARTNFVSP-----ATGRSP---------DAKFS-DLGVLKAKLSKNLQS 129
           DEAA ALRGENARTNF S       +G SP         D + S     LKAKLSKNLQS
Sbjct: 72  DEAARALRGENARTNFASVNPNSYHSGSSPSNGGFVSESDGRHSLSFSSLKAKLSKNLQS 131

Query: 130 IIARTSEQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSIIVPHI---- 189
           I+ART+E S+S KNRVSD FTF NIF+FRS Q     D+  I+K  VQPSIIVPH     
Sbjct: 132 IMARTTE-SRSTKNRVSDHFTFANIFHFRSQQYQKPVDMKKIEK-VVQPSIIVPHAAENH 191

Query: 190 ETDQHGSWDSSNGD------GFQQLGFSSDGSE 198
           E +Q     SS  D      GF+Q G  SDGS+
Sbjct: 192 ELEQSSLETSSVSDCSNEWIGFRQHGVDSDGSD 222

[Close]

BLAST of ClCG05G001890 vs. TrEMBL
Match: V4VY88_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023764mg PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-49
Identity = 127/232 (54.74%), Postives = 143/232 (61.64%), Query Frame = 1


Query: 3   AGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTP 62
           AG ET ++   +         K  ARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTP
Sbjct: 38  AGSETSKNPTTTNSKGGQATTKPAARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTP 97

Query: 63  EEAARAYDEAAIALRGENARTNFVSPATGRSPD-AKFSDLG------------------- 122
           EEAARAYDEAA ALRGENARTNF S A   + +    SD G                   
Sbjct: 98  EEAARAYDEAARALRGENARTNFASSAVNNNNNPLNHSDSGNSSPCVNGRFVAQSDGRNG 157

Query: 123 ----VLKAKLSKNLQSIIARTSEQS-KSLKNRVSDRFTFGNIFNFRSYQSATMADLTPID 182
                LKAKLSKNLQSI+ARTSE + KS K+RVSD FTF +IF+FRSYQ  T  DL  I+
Sbjct: 158 LSFSSLKAKLSKNLQSIMARTSENNKKSTKSRVSDHFTFASIFHFRSYQYQTPVDLKNIE 217

Query: 183 KAAVQPSIIVPHIETDQH--GSWDSSN---------GDGFQQLGFSSDGSEA 199
           K  VQPSIIVP      H   SW+SS+           GF+Q G  SDG ++
Sbjct: 218 K-VVQPSIIVPQAADHMHDPSSWESSSTVSDGSSTEWGGFRQHGLDSDGLDS 268

[Close]

BLAST of ClCG05G001890 vs. TAIR10
Match: AT5G19790.1 (AT5G19790.1 related to AP2 11)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21
Identity = 69/209 (33.01%), Postives = 98/209 (46.89%), Query Frame = 1


Query: 21  QPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGEN 80
           + +K    +FVGVRQRPSG+WVAEIKD++Q++R+WLGT++T EEAARAYDEAA  LRG N
Sbjct: 13  EKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSN 72

Query: 81  ARTNFVSPATGRSPDAKFSDLGVLKAKLSKNLQSIIARTSEQSKSLKNRVSDRFTF-GNI 140
            RTNF +           S L +    L    QS+  +  +Q K + +       +    
Sbjct: 73  TRTNFANHFPNN------SQLSLKIRNLLHQKQSMKQQQQQQHKPVSSLTDCNINYISTA 132

Query: 141 FNFRSYQSATMADLTPIDKAAVQPSIIVPHIETD---QHGSWDSSNGDGFQQLGFSSDGS 200
            +  +  + T     P++      S ++   ET+      SW   +G    Q+  +  G 
Sbjct: 133 TSLTTTTTTTTTTAIPLNNVYRPDSSVIGQPETEGLQLPYSWPLVSGFN-HQIPLAQAGG 192

Query: 201 EAAGDWWVDRILEDDYCDEALKSKGEAER 226
           E  G       L D Y  +      E ER
Sbjct: 193 ETHGH------LNDHYSTDQHLGLAEIER 208

[Close]

BLAST of ClCG05G001890 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2)

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-18
Identity = 55/118 (46.61%), Postives = 71/118 (60.17%), Query Frame = 1


Query: 5   RETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEE 64
           R  K  + VS  +S +    +  ++F GVRQRP G+W AEI+D  +RVRLWLGTY+T EE
Sbjct: 98  RAVKSESTVSPVVS-ATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEE 157

Query: 65  AARAYDEAAIALRGENARTNF-VSPATGRSPDA-KFSDLGVLKAKLSKNLQSIIARTS 121
           AA  YD AAI LRG +A TNF V+P T     A   S +   K K +K+ +S+ A +S
Sbjct: 158 AAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSS 214

[Close]

BLAST of ClCG05G001890 vs. TAIR10
Match: AT1G36060.1 (AT1G36060.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17
Identity = 48/99 (48.48%), Postives = 62/99 (62.63%), Query Frame = 1


Query: 26  PARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNF 85
           PA+ + GVRQR  G+WVAEI+    R RLWLGT+DT EEAA AYD AA  LRG++AR NF
Sbjct: 139 PAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNF 198

Query: 86  --VSPATGRSPDAKFSDLGVLKAKLSKNLQSIIARTSEQ 123
             +   TG SP +   + G ++A +   L++I+A    Q
Sbjct: 199 PALRYQTGSSP-SDTGEYGPIQAAVDAKLEAILAEPKNQ 236

[Close]

BLAST of ClCG05G001890 vs. TAIR10
Match: AT4G11140.1 (AT4G11140.1 cytokinin response factor 1)

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 41/61 (67.21%), Postives = 45/61 (73.77%), Query Frame = 1


Query: 28  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENARTNFVS 87
           R+F GVRQRP G+W AEI+D S+RVR+WLGT+DT EEAA  YD AAI LRG NA  NF  
Sbjct: 85  RKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPP 144

Query: 88  P 89
           P
Sbjct: 145 P 145

[Close]

BLAST of ClCG05G001890 vs. TAIR10
Match: AT1G78080.1 (AT1G78080.1 related to AP2 4)

HSP 1 Score: 85.9 bits (211), Expect = 3.9e-17
Identity = 53/127 (41.73%), Postives = 71/127 (55.91%), Query Frame = 1


Query: 8   KRSAAVSRCISHSQ--PNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEA 67
           K+S     C ++    P+K P + + GVRQR  G+WVAEI+    R RLWLGT+DT EEA
Sbjct: 129 KQSGVAGSCFAYGSGVPSK-PTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEA 188

Query: 68  ARAYDEAAIALRGENARTNFVS-PATGRSPDAKFSDLGVLKAKLSKNLQSI---IARTSE 127
           A AYD+AA  LRG+ AR NF +    G      F +   L + +   L++I   +A T +
Sbjct: 189 ALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLHSSVDAKLEAICKSMAETQK 248

Query: 128 QSKSLKN 129
           Q KS K+
Sbjct: 249 QDKSTKS 254

[Close]

BLAST of ClCG05G001890 vs. NCBI nr
Match: gi|659075362|ref|XP_008438105.1| (PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis melo])

HSP 1 Score: 399.1 bits (1024), Expect = 5.8e-108
Identity = 200/220 (90.91%), Postives = 207/220 (94.09%), Query Frame = 1


Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRETKRSA VSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGRSPDAKFSDLGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGENARTNFVSPA G SPD+K S++GVLKAKLSKNLQSIIARTS
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPAAGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSIIVPHIETDQHGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLT IDKAAVQPSIIVPH+ETDQ GSWDS
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTTIDKAAVQPSIIVPHVETDQSGSWDS 180

Query: 181 SNGDGFQQLGFSSDGSEAAGDWWVDRILEDDYCDEALKSK 221
           S+GDGF+ LGF SDGSE AGDWWVDRILEDD  +E L SK
Sbjct: 181 SDGDGFRPLGFCSDGSEVAGDWWVDRILEDDDYNEGLMSK 220

[Close]

BLAST of ClCG05G001890 vs. NCBI nr
Match: gi|449433103|ref|XP_004134337.1| (PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis sativus])

HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-107
Identity = 199/220 (90.45%), Postives = 208/220 (94.55%), Query Frame = 1


Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRETKRSA VSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGRSPDAKFSDLGVLKAKLSKNLQSIIARTS 120
           TPEEAARAYDEAAIALRGENARTNFVSPATG SPD+K S++GVLKAKLSKNLQSIIARTS
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTPIDKAAVQPSIIVPHIETDQHGSWDS 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLT IDKAAVQPSIIVPH+ETD+ GSWDS
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWDS 180

Query: 181 SNGDGFQQLGFSSDGSEAAGDWWVDRILEDDYCDEALKSK 221
           S+G+G + LGFSSDGSE AGDWWVDRILEDD  +E L SK
Sbjct: 181 SDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSK 220

[Close]

BLAST of ClCG05G001890 vs. NCBI nr
Match: gi|702326492|ref|XP_010053650.1| (PREDICTED: ethylene-responsive transcription factor ERF087-like [Eucalyptus grandis])

HSP 1 Score: 209.1 bits (531), Expect = 8.6e-51
Identity = 136/263 (51.71%), Postives = 164/263 (62.36%), Query Frame = 1


Query: 10  SAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAY 69
           +AA +  ++ + P+K   RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAY
Sbjct: 27  AAAATAVVAAAPPSKPSFRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAY 86

Query: 70  DEAAIALRGENARTNFV------------------SPATGRSPDAKFSDLGV----LKAK 129
           DEAA ALRGENARTNF                   SP+ G +  + ++  G+    LKAK
Sbjct: 87  DEAARALRGENARTNFAAAPSTMNPNNYHQPDSSSSPSCGYTSQSDYARPGLSFSSLKAK 146

Query: 130 LSKNLQSIIARTSEQSKSLKNRVSDRFTFGNIFNFRSY-QSATMADLTPIDKAAVQPSII 189
           LSKNLQSIIAR+SE SKS K+RVSD FTF +IF+FR Y Q     D+  I+K  VQPSI+
Sbjct: 147 LSKNLQSIIARSSE-SKSSKSRVSDHFTFASIFHFRGYNQYQNPGDIENIEK-VVQPSIV 206

Query: 190 VP--HIETDQH--GSWDSS-----NGDGFQQLGFSSDGSEA------AGD----WWVDRI 231
           VP  H+  D     SWD+S     +  GF+  G  SDGSE       AGD     W+D  
Sbjct: 207 VPSSHVAVDLESLSSWDNSSVSDCSSIGFRTPGLDSDGSEVGEAIGMAGDQGFLGWIDSP 266

[Close]

BLAST of ClCG05G001890 vs. NCBI nr
Match: gi|641867306|gb|KDO85990.1| (hypothetical protein CISIN_1g037119mg, partial [Citrus sinensis])

HSP 1 Score: 208.0 bits (528), Expect = 1.9e-50
Identity = 129/234 (55.13%), Postives = 145/234 (61.97%), Query Frame = 1


Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAG ET ++   +         K  ARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGSETSKNPTTTNSKGGQATTKPAARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGRSPD-AKFSDLG----------------- 120
           TPEEAARAYDEAA ALRGENARTNF S A   + +    SD G                 
Sbjct: 61  TPEEAARAYDEAARALRGENARTNFASSAVNNNNNPLNHSDSGNSSPCVNGRFVAQSDGR 120

Query: 121 ------VLKAKLSKNLQSIIARTSEQS-KSLKNRVSDRFTFGNIFNFRSYQSATMADLTP 180
                  LKAKLSKNLQSI+ARTSE + KS K+RVSD FTF +IF+FRSYQ  T  DL  
Sbjct: 121 NGLSFSSLKAKLSKNLQSIMARTSENNKKSTKSRVSDHFTFASIFHFRSYQYQTPVDLKN 180

Query: 181 IDKAAVQPSIIVPHIETDQH--GSWDSSN---------GDGFQQLGFSSDGSEA 199
           I+K  VQPSIIVP      H   SW+SS+           GF+Q G  SDG ++
Sbjct: 181 IEK-VVQPSIIVPQAADHMHDPSSWESSSTVSDGSSTEWGGFRQHGLDSDGLDS 233

[Close]

BLAST of ClCG05G001890 vs. NCBI nr
Match: gi|568876806|ref|XP_006491461.1| (PREDICTED: ethylene-responsive transcription factor ERF027-like [Citrus sinensis])

HSP 1 Score: 208.0 bits (528), Expect = 1.9e-50
Identity = 129/234 (55.13%), Postives = 145/234 (61.97%), Query Frame = 1


Query: 1   MAAGRETKRSAAVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAG ET ++   +         K  ARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGSETSKNPTTTNSKGGQATTKPAARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGRSPD-AKFSDLG----------------- 120
           TPEEAARAYDEAA ALRGENARTNF S A   + +    SD G                 
Sbjct: 61  TPEEAARAYDEAARALRGENARTNFASSAVNNNNNPLNHSDSGNSSPCVNGRFVAQSDGR 120

Query: 121 ------VLKAKLSKNLQSIIARTSEQS-KSLKNRVSDRFTFGNIFNFRSYQSATMADLTP 180
                  LKAKLSKNLQSI+ARTSE + KS K+RVSD FTF +IF+FRSYQ  T  DL  
Sbjct: 121 NGLSFSSLKAKLSKNLQSIMARTSENNKKSTKSRVSDHFTFASIFHFRSYQYQTPVDLKN 180

Query: 181 IDKAAVQPSIIVPHIETDQH--GSWDSSN---------GDGFQQLGFSSDGSEA 199
           I+K  VQPSIIVP      H   SW+SS+           GF+Q G  SDG ++
Sbjct: 181 IEK-VVQPSIIVPQAADHMHDPSSWESSSTVSDGSSTEWGGFRQHGLDSDGLDS 233

The following BLAST results are available for this feature:

BLAST of ClCG05G001890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RA211_ARATH	2.1e-20	33.01	Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2...	[more]
CRF2_ARATH	2.8e-17	46.61	Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE...	[more]
ERF55_ARATH	1.8e-16	48.48	Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF05...	[more]
CRF1_ARATH	2.4e-16	67.21	Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE...	[more]
RAP24_ARATH	6.8e-16	41.73	Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-...	[more]

BLAST of ClCG05G001890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8Z9_CUCSA	9.1e-108	90.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124760 PE=4 SV=1	[more]
A0A067H4Y1_CITSI	1.3e-50	55.13	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g037119mg PE=4 S...	[more]
A5BB59_VITVI	6.6e-50	51.75	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011417 PE=4 SV=1	[more]
B9RDK4_RICCO	1.1e-49	59.15	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1613750 PE=4 SV=1	[more]
V4VY88_9ROSI	1.5e-49	54.74	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023764mg PE=4 SV=1	[more]

BLAST of ClCG05G001890 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G19790.1	1.2e-21	33.01	related to AP2 11	[more]
AT4G23750.1	1.6e-18	46.61	cytokinin response factor 2	[more]
AT1G36060.1	1.0e-17	48.48	Integrase-type DNA-binding superfamily protein	[more]
AT4G11140.1	1.3e-17	67.21	cytokinin response factor 1	[more]
AT1G78080.1	3.9e-17	41.73	related to AP2 4	[more]

BLAST of ClCG05G001890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075362\|ref\|XP_008438105.1\|	5.8e-108	90.91	PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis melo]	[more]
gi\|449433103\|ref\|XP_004134337.1\|	1.3e-107	90.45	PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis sativus...	[more]
gi\|702326492\|ref\|XP_010053650.1\|	8.6e-51	51.71	PREDICTED: ethylene-responsive transcription factor ERF087-like [Eucalyptus gran...	[more]
gi\|641867306\|gb\|KDO85990.1\|	1.9e-50	55.13	hypothetical protein CISIN_1g037119mg, partial [Citrus sinensis]	[more]
gi\|568876806\|ref\|XP_006491461.1\|	1.9e-50	55.13	PREDICTED: ethylene-responsive transcription factor ERF027-like [Citrus sinensis...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf
IPR017392	AP2/ERF-transcript_factor

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G001890.1	ClCG05G001890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 52..68 score: 2.2E-7coord: 30..41 score: 2.
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 29..86 score: 2.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 29..79 score: 2.3
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 29..92 score: 4.0
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 29..86 score: 20
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 30..85 score: 4.38
IPR017392	AP2/ERF transcription factor ERF/PTI6	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 27..182 score: 2.1
None	No IPR available	PANTHER	PTHR31194:SF7	SUBFAMILY NOT NAMED	coord: 27..182 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G001890	Csa3G124760	Cucumber (Chinese Long) v2	cuwcgB222
ClCG05G001890	MELO3C006149	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G001890	Cla021270	Watermelon (97103) v1	wcgwmB286
ClCG05G001890	Cla97C05G082330	Watermelon (97103) v2	wcgwmbB229
ClCG05G001890	Bhi01G000228	Wax gourd	wcgwgoB442
ClCG05G001890	CSPI03G09170	Wild cucumber (PI 183967)	cpiwcgB226
ClCG05G001890	Cucsa.258020	Cucumber (Gy14) v1	cgywcgB451
ClCG05G001890	CmaCh14G020050	Cucurbita maxima (Rimu)	cmawcgB233
ClCG05G001890	CmoCh14G020660	Cucurbita moschata (Rifu)	cmowcgB219
ClCG05G001890	Lsi05G020020	Bottle gourd (USVL1VR-Ls)	lsiwcgB335
ClCG05G001890	Cp4.1LG03g17040	Cucurbita pepo (Zucchini)	cpewcgB559
ClCG05G001890	CsGy3G009250	Cucumber (Gy14) v2	cgybwcgB203
ClCG05G001890	MELO3C006149.2	Melon (DHL92) v3.6.1	medwcgB416
ClCG05G001890	Carg14808	Silver-seed gourd	carwcgB0602
ClCG05G001890	CsaV3_3G009290	Cucumber (Chinese Long) v3	cucwcgB225

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G001890	Cucumber (Chinese Long) v2	cuwcgB470
ClCG05G001890	Melon (DHL92) v3.5.1	mewcgB122
ClCG05G001890	Watermelon (97103) v1	wcgwmB309
ClCG05G001890	Cucurbita pepo (Zucchini)	cpewcgB787
ClCG05G001890	Bottle gourd (USVL1VR-Ls)	lsiwcgB022
ClCG05G001890	Cucumber (Gy14) v2	cgybwcgB431
ClCG05G001890	Melon (DHL92) v3.6.1	medwcgB117
ClCG05G001890	Silver-seed gourd	carwcgB0472
ClCG05G001890	Cucumber (Chinese Long) v3	cucwcgB490
ClCG05G001890	Watermelon (97103) v2	wcgwmbB234
ClCG05G001890	Watermelon (Charleston Gray)	wcgwcgB156
ClCG05G001890	Cucumber (Gy14) v1	cgywcgB617
ClCG05G001890	Cucurbita maxima (Rimu)	cmawcgB737
ClCG05G001890	Cucurbita maxima (Rimu)	cmawcgB798
ClCG05G001890	Cucurbita moschata (Rifu)	cmowcgB743
ClCG05G001890	Cucurbita moschata (Rifu)	cmowcgB793
ClCG05G001890	Wild cucumber (PI 183967)	cpiwcgB494