CmoCh14G020660 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G020660
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEthylene-responsive transcription factor
LocationCmo_Chr14 : 15071133 .. 15075259 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCGGCAGAGAACCCAAAAGATCCGCCGCACTCTCCCGCTGCCAACCCGGTAAATCGCCGGCACGGCGGTTCGTCGGAGTCCGGCAGCGGCCGTCCGGCCGCTGGGTGGCAGAAATAAAAGACTCATCTCAGAGAGTCCGGCTCTGGTTGGGCACTTACGACACCCCAGAGGAAGCCGCCAGAGCCTACGACGAGGCCGCCATTGCCCTTCGCGGCGAGAATACAAGGACCAATTTCGTATCTCCGACGATCGGCCGGTCATCGGAACAAAAAATTCCCGACATCGGCGTGTTGAAAGCGAAACTTAGTAATATTACAGCGAGAACGAACGAACAGAGCAAATCGTTGAAAAACAGAGTAAGCGATCGGTTCACTTTTGGGAACATTTTCAATTTCAGAAGCTACCAACCGGTAACAATGGCGGATTTTACCGCCGTTGATAAGGTGGCCGTGCAGCCGACCATAATTGTGCCGCACGTAGAAACCGATCAGCCCTGTTCGTGGGATGGCAGCTCCGGCGACGGCGATGGATTCCAGCGGCTGGGTTTCGGCTCCGATGGGTCGGAGAGCGGCGGAGAATGGTGGGTGGATCAAATTTTGGGAGATGATTATCGGAATGAAGATTTGAAGAGTAAGAGATTGAGGGTTTCTTCTTCGGTGGTTGTGCCACCAACGTTCAGTGGGTCTCCCAGCTATGGTGAATATTAAATATTTTTTTAATAATGTTAATTTGGGATTAAGAATTTGAAATTATGTGTATATTATTTTAATGAAAAAATGAAAATAATTGGTAAATTACAATTATTTGCTCTAAATTAACAAATTCTCTCTTTTAATTTGTTTTCAAAAATATATTTATAAAATTTTTAAATATTTTTTAAAGTTTTTAAAAGTTTAATAATGTTAATGAAAAAAAATTAATAATAATGGTATTAATAAAAGTTTTAAAAATTTAGAGCTCTATTAAAAAAAAAATTAAGAAAATTATATTTTTAAATAATTTTGAAAAGTTCAATAAAATAAAATCTTAATTATTGTCATTATTAAAATTTGAAAATTTTATATTTTTATAATAAATACAAAATTCATGAGTATTTTAAAAAAATAATAAATTTATAGAAATATTAAAATTTTATTAGTATATATTAATTTAGTCTCTTTAACTTTCAAATAAATATTTAATAAATTTCTAAATTTTGAATTTTGAGGTAAATAGTTAAATAAAAAATTCTAAAAATTAAAAAAATGAGATATAAAATTTTTTATTTTTAATTTATTGATGGGTGTTAAAAAATTAAAATATTGAGAGACAAAAAGAATTTATAATTTAATAAAATATTGATTACATTGAAGTTTCCATATGACTTCTTCATGCCCCATTTAAGTAATAATGATGCCATAATGTTCCATTGTGAAGACTTGCTCCACTTTATATAAATTAAACTAACTTCATATATATATATATATATATATATATATTTCATTTTATGTTTATAATATTTTGATTAATCACATTTTTGGACTAATGATTTGGACTTAAGGCCATTTGACTTATTTTTTTCTTGTATTTTCTTGCTTGGCTATAAGTGGTTAACATGACTTGGCTTGGTAATCAATATAGTCGAGTAAAACTACGTTAGACCTAGCACCCATGATTAAAACAAGAAGAAACGGGGATGATGATGAATAATTAGGGTTTACGACGATCGAACTACCGAGATTTGAGATGATAATTAGTGTTTTATCTTCTAAGTATGTTGGAATCAAAATATCGACCTTTCAAGACTACTACGACCATATATGTTGTATAATAGCTTAAGCTCACTGTTAGCATATACTGTCCGCTTTAATATGTTGCTTCTTGATGTCAGTCTCATGGTTTTAAAATGCGTTTGTTAGACAAAGGTTTCCACACAATGCTTTGGTTATCTCTCCAACCCATGTGAGATCTCACAATCCAATTTCCTTAGGGGCTCAGTGTTCTCGCTGACACACCACATAGTGTCTAGCTCTGATACCATTTGTAATAGCCCAAGCCCACTGCTAACAAATATTATCCGTTTTTACTCGTTATGCATCGTCGTCTACCTCATGATTTTAAAGCGCGCCTGACTGATGGTGATACGTAACGGACCAAAACAAACAATATCTACTAAGGATAGGCTTAAGTCGTTACATGTTGCCAACTTAGGGACAACGTATTCCTAACATATTCATGAATCTGAAAAGAAACGTTAAATAAGTCAAGGGCTTACTAGACACAAAATTGAATATTTATAGATTTATTAAATATTTAATTATTATATTGGAATTAAAAAAATGATTATGATGGGAATAATCCCAACATAATAATCTAAATTTTCATTCCTTTTAAGAATAATAATAATTAATTTCATATAAATTGAAATTACATGAATTAACAATAATTTGATAAAAACCATGCCTCAGACAAGAAGCTTGCGTTGACTTTTAGATGACATTGAGAATTAATTTATGTTATAATGTATTAATAATCATAAGGTCTATTGACTGTGTGCCCCCACAGACATAATATTGCATTTTTCATAATTTTATAATAATCTTTTTTCGGGTATTTATCCCATTACTTTATTTTTATTCATTAATTCATGTGCACATTCATCATAATTTCGGGTCCCTATATTCTATTTATTTAACATAAATATATTTTTCCCTTTTTATTTATTTATTTATTTCAATGTTAAAATTATATATTAAAAAATGATATTTATTAATTAAATTTTTTAAAGTTAAATTACAAATTTAGTTATTAAATTTTTAATATTAACGTTTTTAACTTAAAAATAATAATAACAAATTAATATATATATATATATATATATATATATATATATATATAAAATGAACGTTTAAATAAGTTTCCTTTTGAGTTGTGGTAGAAATAATATAAAACGTACTACTACATAGCTCACGAGAGAGAACCAGTCTTTAATTCAGTAGTATGCTCGGTTCACTAGATTCTATTATAAGGAACTCTAGCCATATGCTTAACACGTGCAAGTAGAACGTTGATTAATAAAAATCTACACCAACGTCGTTAATGATGTGAATTATTATTATTTAAATAGATGAAGAGAGTCGAGAGGGCTTCTGCAATCCATTCTTTAACGACAGGTAGTTCACACTCGACAACACAATGGTCGAGCACGAGACCATTTCAAGAATATTATATGCTTTAAAACCAACCAATTTTTATTTGTTTTCACTGTTTTGGAAAGGAATATACTGTTATTGTTTTCTGTTGATTTCTTTATCACTAATATTCTACAAAAATAAAATATCTTTTACTATTTTTTTTTATTATTTTCTGCTTTTTAATTCTTTATTTTCAAATAATAATAAAAAAAAAAAGTATTTATTCCGGAAAATTTTAAAATTAAATACAAAAATAAATAAAACTGTGTGTGTTATTTTATTTCATTAACAGCCATCCATGGCCTTTCCTACACAGTCACAAGAAGCCCATAGATAAATAATTGTTTACCAGACAGAATCTCAGGCGACGGGACAGTGGGGGCTGACATTTTTGCTGCTATCAGAGAGTTGAATCGGCGTGAGGTTTCAAGAAATTTGATTTTTGAATGCGATTGTCCTTTCCGGCGTCGATTTCTGTCGAAAAAGCTATGGTACTTCTTCCAATTTATTCAAACTTCGGTTTCTCGATCTTCTGTCACTCTGTCCTTTCGTTCTTTTGCTGTTCTTCATCTTCGTCCTCTTCGCGAGCCGATTTCTCGACCGTTTTCTCCATTTCTTGAAGTAAGAACCGTTATATGGCTTCTAGGTTTTCTTGATTTTGTAAATTAGAGTGATGGATCTTCTAGATCGAGCTCTCTCTCTCAATCACTGCTGTTTAAGCCGTTTCTAGGTCACTTCAAATAGAGAAAAGCTGCATAGCTTCTGATTCTTGAAGGTTCGCCCTAGAAATTTCACTTTTGCTCAGGCGTTTTTGGCCTTTTCTATGTGTATAACTAAGTTCTTGTTTTCTGGTATTGATAGGCTTCAATGTTTTCTTTGCAGGTAAAGGAGAAGCTAAGCGTTTGGTGGCTGTTGTGTTAATCATGCTGCAAATTTTCCATTTCTAA

mRNA sequence

ATGGCCGCCGGCAGAGAACCCAAAAGATCCGCCGCACTCTCCCGCTGCCAACCCGGTAAATCGCCGGCACGGCGGTTCGTCGGAGTCCGGCAGCGGCCGTCCGGCCGCTGGGTGGCAGAAATAAAAGACTCATCTCAGAGAGTCCGGCTCTGGTTGGGCACTTACGACACCCCAGAGGAAGCCGCCAGAGCCTACGACGAGGCCGCCATTGCCCTTCGCGGCGAGAATACAAGGACCAATTTCGTATCTCCGACGATCGGCCGGTCATCGGAACAAAAAATTCCCGACATCGGCGTGTTGAAAGCGAAACTTAGTAATATTACAGCGAGAACGAACGAACAGAGCAAATCGTTGAAAAACAGAGTAAGCGATCGGTTCACTTTTGGGAACATTTTCAATTTCAGAAGCTACCAACCGGTAACAATGGCGGATTTTACCGCCGTTGATAAGGTGGCCGTGCAGCCGACCATAATTGTGCCGCACGTAGAAACCGATCAGCCCTGTTCGTGGGATGGCAGCTCCGGCGACGGCGATGGATTCCAGCGGCTGGGTTTCGGCTCCGATGGGTCGGAGAGCGGCGGAGAATGGTGGGTGGATCAAATTTTGGGAGATGATTATCGGAATGAAGATTTGAAGAGTAAGAGATTGAGGGTTTCTTCTTCGGTGGTTGTGCCACCAACGTTCAGTGGGTCTCCCAGCTATGACAGAATCTCAGGCGACGGGACAGTGGGGGCTGACATTTTTGCTGCTATCAGAGAGTTGAATCGGCGTGAGGTTTCAAGAAATTTGATTTTTGAATGCGATTGTCCTTTCCGGCGTCGATTTCTGTCGAAAAAGCTATGGTACTTCTTCCAATTTATTCAAACTTCGGTTTCTCGATCTTCTGTCACTCTGTCCTTTCGTTCTTTTGCTGTTCTTCATCTTCGTCCTCTTCGCGAGCCGATTTCTCGACCGTTTTCTCCATTTCTTGAAGTAAGAACCGTTATATGGCTTCTAGGTAAAGGAGAAGCTAAGCGTTTGGTGGCTGTTGTGTTAATCATGCTGCAAATTTTCCATTTCTAA

Coding sequence (CDS)

ATGGCCGCCGGCAGAGAACCCAAAAGATCCGCCGCACTCTCCCGCTGCCAACCCGGTAAATCGCCGGCACGGCGGTTCGTCGGAGTCCGGCAGCGGCCGTCCGGCCGCTGGGTGGCAGAAATAAAAGACTCATCTCAGAGAGTCCGGCTCTGGTTGGGCACTTACGACACCCCAGAGGAAGCCGCCAGAGCCTACGACGAGGCCGCCATTGCCCTTCGCGGCGAGAATACAAGGACCAATTTCGTATCTCCGACGATCGGCCGGTCATCGGAACAAAAAATTCCCGACATCGGCGTGTTGAAAGCGAAACTTAGTAATATTACAGCGAGAACGAACGAACAGAGCAAATCGTTGAAAAACAGAGTAAGCGATCGGTTCACTTTTGGGAACATTTTCAATTTCAGAAGCTACCAACCGGTAACAATGGCGGATTTTACCGCCGTTGATAAGGTGGCCGTGCAGCCGACCATAATTGTGCCGCACGTAGAAACCGATCAGCCCTGTTCGTGGGATGGCAGCTCCGGCGACGGCGATGGATTCCAGCGGCTGGGTTTCGGCTCCGATGGGTCGGAGAGCGGCGGAGAATGGTGGGTGGATCAAATTTTGGGAGATGATTATCGGAATGAAGATTTGAAGAGTAAGAGATTGAGGGTTTCTTCTTCGGTGGTTGTGCCACCAACGTTCAGTGGGTCTCCCAGCTATGACAGAATCTCAGGCGACGGGACAGTGGGGGCTGACATTTTTGCTGCTATCAGAGAGTTGAATCGGCGTGAGGTTTCAAGAAATTTGATTTTTGAATGCGATTGTCCTTTCCGGCGTCGATTTCTGTCGAAAAAGCTATGGTACTTCTTCCAATTTATTCAAACTTCGGTTTCTCGATCTTCTGTCACTCTGTCCTTTCGTTCTTTTGCTGTTCTTCATCTTCGTCCTCTTCGCGAGCCGATTTCTCGACCGTTTTCTCCATTTCTTGAAGTAAGAACCGTTATATGGCTTCTAGGTAAAGGAGAAGCTAAGCGTTTGGTGGCTGTTGTGTTAATCATGCTGCAAATTTTCCATTTCTAA
Homology
[Close]
BLAST of CmoCh14G020660 vs. Swiss-Prot
Match: RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.8e-20
Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 1 

Query: 17  QPGKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGEN 76
           +  K    +FVGVRQRPSG+WVAEIKD++Q++R+WLGT++T EEAARAYDEAA  LRG N
Sbjct: 13  EKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSN 72

Query: 77  TRTNFVSPTIGRSSEQKIPDIGVLKAKLSNITARTNEQSKSLKNR 122
           TRTNF +           P+   L  K+ N+      Q +S+K +
Sbjct: 73  TRTNFAN---------HFPNNSQLSLKIRNLL----HQKQSMKQQ 104

[Close]
BLAST of CmoCh14G020660 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.2e-17
Identity = 53/136 (38.97%), Postives = 75/136 (55.15%), Query Frame = 1 

Query: 24  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENTRTNF-V 83
           ++F GVRQRP G+W AEI+D  +RVRLWLGTY+T EEAA  YD AAI LRG +  TNF V
Sbjct: 120 KKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSV 179

Query: 84  SPTIGRSSEQKIPDIGVLKAKLSNITARTNEQSKSLKNRVSDRFTFGNIFNFRSYQPVTM 143
           +PT     +   P     K K +N + ++   S S+    S+      +   RS  P  +
Sbjct: 180 TPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISRSSSNDCLCSPVSVLRS--PFAV 239

Query: 144 ADFTAVDKVAVQPTII 159
            +F+ +    V   ++
Sbjct: 240 DEFSGISSSPVAAVVV 253

[Close]
BLAST of CmoCh14G020660 vs. Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-16
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 1 

Query: 24  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENTRTNFVS 83
           R+F GVRQRP G+W AEI+D S+RVR+WLGT+DT EEAA  YD AAI LRG N   NF  
Sbjct: 85  RKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPP 144

Query: 84  PTIGRSSEQKIPDI 98
           P +  + E+   ++
Sbjct: 145 PPVTENVEEASTEV 158

[Close]
BLAST of CmoCh14G020660 vs. Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.3e-15
Identity = 50/141 (35.46%), Postives = 75/141 (53.19%), Query Frame = 1 

Query: 1   MAAGREPKRSAALSRCQPGKSPA-----RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTY 60
           +++  +  +S A SR +P    +     ++F GVRQRP G+W AEI+D  QR R+WLGT+
Sbjct: 95  LSSSSDETQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTF 154

Query: 61  DTPEEAARAYDEAAIALRGENTRTNFVSPTIGRSSEQKIPDIGVLKAKLSNITARTNEQS 120
           +T EEAA  YD AAI LRG +  TNF  P      E++   +   K  +      T   S
Sbjct: 155 ETAEEAAVVYDNAAIRLRGPDALTNFSIPPQEEEEEEEPEPVIEEKPVIMTTPTPTTSSS 214

Query: 121 KSLKNRVSDRFTFGNIFNFRS 137
           +S +  +    +  ++ N RS
Sbjct: 215 ESTEEDLQHLSSPTSVLNHRS 235

[Close]
BLAST of CmoCh14G020660 vs. Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.1e-14
Identity = 40/82 (48.78%), Postives = 55/82 (67.07%), Query Frame = 1 

Query: 24  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENTRTNF-- 83
           ++F GVRQRP GRW AEI+D ++  R+WLGTYDTPEEAA  YD+AA+ L+G +  TNF  
Sbjct: 96  KKFRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPV 155

Query: 84  -----VSPTIGRSSEQKIPDIG 99
                V+ T+  +  + + D G
Sbjct: 156 STTAEVTVTVTETETESVADGG 177

[Close]
BLAST of CmoCh14G020660 vs. TrEMBL
Match: A0A0A0L8Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124760 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.9e-95
Identity = 189/242 (78.10%), Postives = 203/242 (83.88%), Query Frame = 1 

Query: 1   MAAGREPKRSAALSRC----QPGKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRE KRSA +SRC    QP KSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENTRTNFVSPTIGRSSEQKIPDIGVLKAKLS----NITARTN 120
           TPEEAARAYDEAAIALRGEN RTNFVSP  G S + K+ +IGVLKAKLS    +I ART+
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQPVTMADFTAVDKVAVQPTIIVPHVETDQPCSWDG 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQ  TMAD TA+DK AVQP+IIVPHVETD+  SWD 
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWD- 180

Query: 181 SSGDGDGFQRLGFGSDGSESGGEWWVDQILGDDYRNEDLKSKRLRVSSSVVVPPTFSGSP 235
            S DG+G + LGF SDGSE  G+WWVD+IL DD  NE L SKR RVSSSVVVPPTFSGSP
Sbjct: 181 -SSDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSP 240

[Close]
BLAST of CmoCh14G020660 vs. TrEMBL
Match: B9IC72_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07280g PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.3e-51
Identity = 142/264 (53.79%), Postives = 166/264 (62.88%), Query Frame = 1 

Query: 14  SRCQPGKSPA-RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIAL 73
           ++ Q  K P  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAA AL
Sbjct: 16  TKVQATKGPTLRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAARAL 75

Query: 74  RGENTRTNF--VSPTIGRSSEQKIPDIGV---------------LKAKLS----NITART 133
           RGEN RTNF  VSP + +S      + G+               LKAKLS    +I ART
Sbjct: 76  RGENARTNFASVSPNLNQSGSSPSSNGGLNMSESDERHGLSFSSLKAKLSKNLQSIMART 135

Query: 134 NEQSKSLKNRVSDRFTFGNIFNFRSYQPVTMADFTAVDKVAVQPTIIVPHVETDQPC-SW 193
            E +KS KNRVSD FTF NIF+FR +Q     D  +++KV VQP+IIVPHV   +P  SW
Sbjct: 136 TE-NKSTKNRVSDHFTFANIFHFRGHQYQNPVDMKSIEKV-VQPSIIVPHVSDHKPSYSW 195

Query: 194 DGS-----SGDGDGFQRLGFGSDGSESGGE----------WWVDQ-----ILGDDYRNED 235
           + S     S +  GF++ GF SDGS+ G             WVD        GD      
Sbjct: 196 ETSCVSDCSNEWIGFRQHGFDSDGSDIGEVLSTVNADQMIGWVDSPDINTCCGDPCS--- 255

[Close]
BLAST of CmoCh14G020660 vs. TrEMBL
Match: A5BB59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011417 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.2e-50
Identity = 138/259 (53.28%), Postives = 167/259 (64.48%), Query Frame = 1 

Query: 10  SAALSRCQPGKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAA 69
           S   +  QP K   RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAA
Sbjct: 86  STTNTMAQPSKPAVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAA 145

Query: 70  IALRGENTRTNFV-----------SPT----IGRSSEQKIPDIGVLKAKLS----NITAR 129
            ALRGEN RTNF            SP+    +  S E+       LKAKLS    +I AR
Sbjct: 146 RALRGENARTNFAPVNPNSYQSGSSPSKGGFVSESEERNGLSFSSLKAKLSKNLQSIMAR 205

Query: 130 TNEQSKSLKNRVSDRFTFGNIFNFRSYQPVTMADFTAVDKVAVQPTIIVPHVETDQPCSW 189
           T++ +KS K+RVSD FTF +IF+ RSY   +  D  +++KV VQP+IIVPHV  D+P SW
Sbjct: 206 TSD-NKSSKSRVSDHFTFASIFHSRSYHYQSPVDMKSMEKV-VQPSIIVPHV-ADEP-SW 265

Query: 190 DGS-----SGDGDGFQRLGFGSDGSESG-----GEWWVDQILG-------DDYRNEDLKS 233
           + S     S +  GF++ G  SDGS+ G      + +VDQ++G           +E  +S
Sbjct: 266 ESSSVSDCSTEWVGFRQHGLDSDGSDIGEISASEQGFVDQMMGWIDSPELSISTSEVSRS 325

[Close]
BLAST of CmoCh14G020660 vs. TrEMBL
Match: A0A067JXK0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14462 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.2e-49
Identity = 135/250 (54.00%), Postives = 155/250 (62.00%), Query Frame = 1 

Query: 23  ARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENTRTNFV 82
           ARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAA ALRGEN RTNF 
Sbjct: 19  ARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAARALRGENARTNFA 78

Query: 83  SPT-----------------IGRSSEQKIPDIGVLKAKLS----NITARTNEQSKSLKNR 142
           S                   +  S  +       LKAKLS    NI ART E +KS KNR
Sbjct: 79  SSVNNNNNNNLNSNQSNGGFVSESDGRHGLSFSSLKAKLSKNLQNIMARTTE-TKSTKNR 138

Query: 143 VSDRFTFGNIFNFRSYQPVTMADFTAVDKVAVQPTIIVPHVETDQPCSWDGS-----SGD 202
           VSD FTF +IF+FRS Q     +   ++KV VQP+IIVPH   D+P SW+ S     S +
Sbjct: 139 VSDHFTFASIFHFRSQQYQKPVNIKNIEKV-VQPSIIVPHA-ADEPSSWETSSVSDCSNE 198

Query: 203 GDGFQRLGFGSDGSESG----GE--------WWVDQILGDDYRNEDLKSKRLRVSSSVVV 235
             GF++LG  SDGS+ G    G+         W+D        NE  +SKR +VSSSVVV
Sbjct: 199 WIGFRQLGLDSDGSDIGEVSIGDGGFSEQMMGWIDSPEISGCSNEGSRSKRFKVSSSVVV 258

[Close]
BLAST of CmoCh14G020660 vs. TrEMBL
Match: M5Y2Z9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022202mg PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 133/278 (47.84%), Postives = 165/278 (59.35%), Query Frame = 1 

Query: 20  KSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENTRT 79
           K+  RR+VGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAA ALRGEN RT
Sbjct: 32  KTALRRYVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAARALRGENART 91

Query: 80  NFVSP-----------------------TIGRSSEQKIPDIGVLKAKLS----NITARTN 139
           NFVSP                       + GR           LKAKLS    +I AR++
Sbjct: 92  NFVSPGPATNPNSSPLVSSVSNGGFMSGSDGRHGGTGGLSFSSLKAKLSKNLQSIMARSS 151

Query: 140 EQSKSLKNRVSDRFTFGNIFNFRSYQ---PVTMA-DFTAVDKVAVQPTIIVPH----VET 199
           + +KS K+RVSD FTF +IF+FR YQ   P+  + D   ++KV VQP+IIVPH      +
Sbjct: 152 DHNKSSKSRVSDHFTFASIFHFRKYQYQNPINPSIDMKNIEKV-VQPSIIVPHNGEGSTS 211

Query: 200 DQPCSWDGSSGD------GDGFQRLGFGSDGSESGGEWWVDQIL---------------- 241
            +P SW+ SS          GF++ G  S+GSE G    +DQ++                
Sbjct: 212 TEPSSWESSSISDCSAEWAHGFRQAGVDSEGSEIGEGNIMDQLMGWIDSPDNQMGSRISV 271

[Close]
BLAST of CmoCh14G020660 vs. TAIR10
Match: AT5G19790.1 (AT5G19790.1 related to AP2 11)

HSP 1 Score: 100.5 bits (249), Expect = 2.2e-21
Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 1 

Query: 17  QPGKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGEN 76
           +  K    +FVGVRQRPSG+WVAEIKD++Q++R+WLGT++T EEAARAYDEAA  LRG N
Sbjct: 13  EKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSN 72

Query: 77  TRTNFVSPTIGRSSEQKIPDIGVLKAKLSNITARTNEQSKSLKNR 122
           TRTNF +           P+   L  K+ N+      Q +S+K +
Sbjct: 73  TRTNFAN---------HFPNNSQLSLKIRNLL----HQKQSMKQQ 104

[Close]
BLAST of CmoCh14G020660 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2)

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-18
Identity = 53/136 (38.97%), Postives = 75/136 (55.15%), Query Frame = 1 

Query: 24  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENTRTNF-V 83
           ++F GVRQRP G+W AEI+D  +RVRLWLGTY+T EEAA  YD AAI LRG +  TNF V
Sbjct: 120 KKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSV 179

Query: 84  SPTIGRSSEQKIPDIGVLKAKLSNITARTNEQSKSLKNRVSDRFTFGNIFNFRSYQPVTM 143
           +PT     +   P     K K +N + ++   S S+    S+      +   RS  P  +
Sbjct: 180 TPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISRSSSNDCLCSPVSVLRS--PFAV 239

Query: 144 ADFTAVDKVAVQPTII 159
            +F+ +    V   ++
Sbjct: 240 DEFSGISSSPVAAVVV 253

[Close]
BLAST of CmoCh14G020660 vs. TAIR10
Match: AT4G11140.1 (AT4G11140.1 cytokinin response factor 1)

HSP 1 Score: 88.6 bits (218), Expect = 8.5e-18
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 1 

Query: 24  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENTRTNFVS 83
           R+F GVRQRP G+W AEI+D S+RVR+WLGT+DT EEAA  YD AAI LRG N   NF  
Sbjct: 85  RKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPP 144

Query: 84  PTIGRSSEQKIPDI 98
           P +  + E+   ++
Sbjct: 145 PPVTENVEEASTEV 158

[Close]
BLAST of CmoCh14G020660 vs. TAIR10
Match: AT5G53290.1 (AT5G53290.1 cytokinin response factor 3)

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-16
Identity = 50/141 (35.46%), Postives = 75/141 (53.19%), Query Frame = 1 

Query: 1   MAAGREPKRSAALSRCQPGKSPA-----RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTY 60
           +++  +  +S A SR +P    +     ++F GVRQRP G+W AEI+D  QR R+WLGT+
Sbjct: 95  LSSSSDETQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTF 154

Query: 61  DTPEEAARAYDEAAIALRGENTRTNFVSPTIGRSSEQKIPDIGVLKAKLSNITARTNEQS 120
           +T EEAA  YD AAI LRG +  TNF  P      E++   +   K  +      T   S
Sbjct: 155 ETAEEAAVVYDNAAIRLRGPDALTNFSIPPQEEEEEEEPEPVIEEKPVIMTTPTPTTSSS 214

Query: 121 KSLKNRVSDRFTFGNIFNFRS 137
           +S +  +    +  ++ N RS
Sbjct: 215 ESTEEDLQHLSSPTSVLNHRS 235

[Close]
BLAST of CmoCh14G020660 vs. TAIR10
Match: AT3G15210.1 (AT3G15210.1 ethylene responsive element binding factor 4)

HSP 1 Score: 82.4 bits (202), Expect = 6.1e-16
Identity = 40/71 (56.34%), Postives = 51/71 (71.83%), Query Frame = 1 

Query: 25 RFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIALRGENTRTNFVSP 84
          R+ GVR+RP GR+ AEI+D  ++ R+WLGT+DT EEAARAYD AA   RG   +TNF  P
Sbjct: 24 RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNF--P 83

Query: 85 TIGRSSEQKIP 96
          T    S+QK+P
Sbjct: 84 TFLELSDQKVP 92

[Close]
BLAST of CmoCh14G020660 vs. NCBI nr
Match: gi|659075362|ref|XP_008438105.1| (PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis melo])

HSP 1 Score: 359.8 bits (922), Expect = 5.6e-96
Identity = 191/242 (78.93%), Postives = 203/242 (83.88%), Query Frame = 1 

Query: 1   MAAGREPKRSAALSRC----QPGKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRE KRSA +SRC    QP KSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENTRTNFVSPTIGRSSEQKIPDIGVLKAKLS----NITARTN 120
           TPEEAARAYDEAAIALRGEN RTNFVSP  G S + K+ +IGVLKAKLS    +I ART+
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPAAGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQPVTMADFTAVDKVAVQPTIIVPHVETDQPCSWDG 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQ  TMAD T +DK AVQP+IIVPHVETDQ  SWD 
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTTIDKAAVQPSIIVPHVETDQSGSWD- 180

Query: 181 SSGDGDGFQRLGFGSDGSESGGEWWVDQILGDDYRNEDLKSKRLRVSSSVVVPPTFSGSP 235
            S DGDGF+ LGF SDGSE  G+WWVD+IL DD  NE L SKR RVSSSVVVPPTFSGSP
Sbjct: 181 -SSDGDGFRPLGFCSDGSEVAGDWWVDRILEDDDYNEGLMSKRFRVSSSVVVPPTFSGSP 240

[Close]
BLAST of CmoCh14G020660 vs. NCBI nr
Match: gi|449433103|ref|XP_004134337.1| (PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 2.8e-95
Identity = 189/242 (78.10%), Postives = 203/242 (83.88%), Query Frame = 1 

Query: 1   MAAGREPKRSAALSRC----QPGKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60
           MAAGRE KRSA +SRC    QP KSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD
Sbjct: 1   MAAGRETKRSATVSRCISHSQPNKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYD 60

Query: 61  TPEEAARAYDEAAIALRGENTRTNFVSPTIGRSSEQKIPDIGVLKAKLS----NITARTN 120
           TPEEAARAYDEAAIALRGEN RTNFVSP  G S + K+ +IGVLKAKLS    +I ART+
Sbjct: 61  TPEEAARAYDEAAIALRGENARTNFVSPATGWSPDSKVSNIGVLKAKLSKNLQSIIARTS 120

Query: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQPVTMADFTAVDKVAVQPTIIVPHVETDQPCSWDG 180
           EQSKSLKNRVSDRFTFGNIFNFRSYQ  TMAD TA+DK AVQP+IIVPHVETD+  SWD 
Sbjct: 121 EQSKSLKNRVSDRFTFGNIFNFRSYQSATMADLTAIDKAAVQPSIIVPHVETDRSGSWD- 180

Query: 181 SSGDGDGFQRLGFGSDGSESGGEWWVDQILGDDYRNEDLKSKRLRVSSSVVVPPTFSGSP 235
            S DG+G + LGF SDGSE  G+WWVD+IL DD  NE L SKR RVSSSVVVPPTFSGSP
Sbjct: 181 -SSDGEGIRPLGFSSDGSEVAGDWWVDRILEDDCYNEGLMSKRFRVSSSVVVPPTFSGSP 240

[Close]
BLAST of CmoCh14G020660 vs. NCBI nr
Match: gi|224130152|ref|XP_002320765.1| (hypothetical protein POPTR_0014s07280g [Populus trichocarpa])

HSP 1 Score: 211.8 bits (538), Expect = 1.9e-51
Identity = 142/264 (53.79%), Postives = 166/264 (62.88%), Query Frame = 1 

Query: 14  SRCQPGKSPA-RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIAL 73
           ++ Q  K P  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAA AL
Sbjct: 16  TKVQATKGPTLRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAARAL 75

Query: 74  RGENTRTNF--VSPTIGRSSEQKIPDIGV---------------LKAKLS----NITART 133
           RGEN RTNF  VSP + +S      + G+               LKAKLS    +I ART
Sbjct: 76  RGENARTNFASVSPNLNQSGSSPSSNGGLNMSESDERHGLSFSSLKAKLSKNLQSIMART 135

Query: 134 NEQSKSLKNRVSDRFTFGNIFNFRSYQPVTMADFTAVDKVAVQPTIIVPHVETDQPC-SW 193
            E +KS KNRVSD FTF NIF+FR +Q     D  +++KV VQP+IIVPHV   +P  SW
Sbjct: 136 TE-NKSTKNRVSDHFTFANIFHFRGHQYQNPVDMKSIEKV-VQPSIIVPHVSDHKPSYSW 195

Query: 194 DGS-----SGDGDGFQRLGFGSDGSESGGE----------WWVDQ-----ILGDDYRNED 235
           + S     S +  GF++ GF SDGS+ G             WVD        GD      
Sbjct: 196 ETSCVSDCSNEWIGFRQHGFDSDGSDIGEVLSTVNADQMIGWVDSPDINTCCGDPCS--- 255

[Close]
BLAST of CmoCh14G020660 vs. NCBI nr
Match: gi|743789146|ref|XP_011035387.1| (PREDICTED: uncharacterized protein LOC105133206 [Populus euphratica])

HSP 1 Score: 210.7 bits (535), Expect = 4.2e-51
Identity = 140/261 (53.64%), Postives = 169/261 (64.75%), Query Frame = 1 

Query: 14  SRCQPGKSPA-RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAAIAL 73
           ++ Q  K P  RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAA AL
Sbjct: 16  TKVQATKGPTVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAARAL 75

Query: 74  RGENTRTNF--VSPTIGRSSEQKIPDIGV---------------LKAKLS----NITART 133
           RGEN RTNF  V+P + +       + G+               LKAKLS    +I ART
Sbjct: 76  RGENARTNFASVNPNLNQYGSSPSSNGGLKMSESDGRHGLSFSSLKAKLSKNLQSIMART 135

Query: 134 NEQSKSLKNRVSDRFTFGNIFNFRSYQPVTMADFTAVDKVAVQPTIIVPHVETDQPC-SW 193
            E +K+ KNRVSD FTF NIF+FRS+Q     D  +++KV VQP+IIVPHV   +P  SW
Sbjct: 136 TE-NKATKNRVSDHFTFANIFHFRSHQYQNPVDMKSIEKV-VQPSIIVPHVSDHKPSYSW 195

Query: 194 DGS-----SGDGDGFQRLGFGSDGSESG---GEWWVDQILGDDYRNEDL---------KS 235
           + S     S +  GF++ GF SDGS+ G        DQ++G    + D+         +S
Sbjct: 196 ETSCVSDCSNEWIGFRQYGFDSDGSDIGEVLSTVNADQMIG-WVESPDINTCCGDPCSRS 255

[Close]
BLAST of CmoCh14G020660 vs. NCBI nr
Match: gi|147781798|emb|CAN65440.1| (hypothetical protein VITISV_011417 [Vitis vinifera])

HSP 1 Score: 207.2 bits (526), Expect = 4.6e-50
Identity = 138/259 (53.28%), Postives = 167/259 (64.48%), Query Frame = 1 

Query: 10  SAALSRCQPGKSPARRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAA 69
           S   +  QP K   RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAA
Sbjct: 86  STTNTMAQPSKPAVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDTPEEAARAYDEAA 145

Query: 70  IALRGENTRTNFV-----------SPT----IGRSSEQKIPDIGVLKAKLS----NITAR 129
            ALRGEN RTNF            SP+    +  S E+       LKAKLS    +I AR
Sbjct: 146 RALRGENARTNFAPVNPNSYQSGSSPSKGGFVSESEERNGLSFSSLKAKLSKNLQSIMAR 205

Query: 130 TNEQSKSLKNRVSDRFTFGNIFNFRSYQPVTMADFTAVDKVAVQPTIIVPHVETDQPCSW 189
           T++ +KS K+RVSD FTF +IF+ RSY   +  D  +++KV VQP+IIVPHV  D+P SW
Sbjct: 206 TSD-NKSSKSRVSDHFTFASIFHSRSYHYQSPVDMKSMEKV-VQPSIIVPHV-ADEP-SW 265

Query: 190 DGS-----SGDGDGFQRLGFGSDGSESG-----GEWWVDQILG-------DDYRNEDLKS 233
           + S     S +  GF++ G  SDGS+ G      + +VDQ++G           +E  +S
Sbjct: 266 ESSSVSDCSTEWVGFRQHGLDSDGSDIGEISASEQGFVDQMMGWIDSPELSISTSEVSRS 325

The following BLAST results are available for this feature:
BLAST of CmoCh14G020660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RA211_ARATH3.8e-2049.52Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2... [more]
CRF2_ARATH5.2e-1738.97Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE... [more]
CRF1_ARATH1.5e-1655.41Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE... [more]
CRF3_ARATH6.3e-1535.46Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE... [more]
PTI6_SOLLC1.1e-1448.78Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicu... [more]
BLAST of CmoCh14G020660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8Z9_CUCSA1.9e-9578.10Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124760 PE=4 SV=1[more]
B9IC72_POPTR1.3e-5153.79Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07280g PE=4 SV=1[more]
A5BB59_VITVI3.2e-5053.28Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011417 PE=4 SV=1[more]
A0A067JXK0_JATCU1.2e-4954.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14462 PE=4 SV=1[more]
M5Y2Z9_PRUPE1.4e-4847.84Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022202mg PE=4 SV=1[more]
BLAST of CmoCh14G020660 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G19790.12.2e-2149.52 related to AP2 11[more]
AT4G23750.12.9e-1838.97 cytokinin response factor 2[more]
AT4G11140.18.5e-1855.41 cytokinin response factor 1[more]
AT5G53290.13.6e-1635.46 cytokinin response factor 3[more]
AT3G15210.16.1e-1656.34 ethylene responsive element binding factor 4[more]
BLAST of CmoCh14G020660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075362|ref|XP_008438105.1|5.6e-9678.93PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis melo][more]
gi|449433103|ref|XP_004134337.1|2.8e-9578.10PREDICTED: ethylene-responsive transcription factor ERF071-like [Cucumis sativus... [more]
gi|224130152|ref|XP_002320765.1|1.9e-5153.79hypothetical protein POPTR_0014s07280g [Populus trichocarpa][more]
gi|743789146|ref|XP_011035387.1|4.2e-5153.64PREDICTED: uncharacterized protein LOC105133206 [Populus euphratica][more]
gi|147781798|emb|CAN65440.1|4.6e-5053.28hypothetical protein VITISV_011417 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G020660.1CmoCh14G020660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 48..64
score: 3.9E-7coord: 26..37
score: 3.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 25..82
score: 2.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 25..75
score: 4.0
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 25..91
score: 6.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 25..82
score: 20
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 26..81
score: 1.7
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 23..163
score: 6.1
NoneNo IPR availablePANTHERPTHR31194:SF7SUBFAMILY NOT NAMEDcoord: 23..163
score: 6.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh14G020660Cucsa.258020Cucumber (Gy14) v1cgycmoB0700
CmoCh14G020660CmaCh14G020050Cucurbita maxima (Rimu)cmacmoB245
CmoCh14G020660Cla021270Watermelon (97103) v1cmowmB231
CmoCh14G020660Csa3G124760Cucumber (Chinese Long) v2cmocuB239
CmoCh14G020660MELO3C006149Melon (DHL92) v3.5.1cmomeB230
CmoCh14G020660ClCG05G001890Watermelon (Charleston Gray)cmowcgB219
CmoCh14G020660CSPI03G09170Wild cucumber (PI 183967)cmocpiB243
CmoCh14G020660Lsi05G020020Bottle gourd (USVL1VR-Ls)cmolsiB233
CmoCh14G020660Cp4.1LG03g17040Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G020660MELO3C006149.2Melon (DHL92) v3.6.1cmomedB260
CmoCh14G020660CsaV3_3G009290Cucumber (Chinese Long) v3cmocucB0283
CmoCh14G020660Cla97C05G082330Watermelon (97103) v2cmowmbB243
CmoCh14G020660Bhi01G000228Wax gourdcmowgoB0308
CmoCh14G020660CsGy3G009250Cucumber (Gy14) v2cgybcmoB290
CmoCh14G020660Carg14808Silver-seed gourdcarcmoB0850
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G020660Cucurbita moschata (Rifu)cmocmoB198
CmoCh14G020660Cucurbita moschata (Rifu)cmocmoB224
CmoCh14G020660Cucurbita moschata (Rifu)cmocmoB235
CmoCh14G020660Cucumber (Gy14) v1cgycmoB0992
CmoCh14G020660Cucurbita maxima (Rimu)cmacmoB350
CmoCh14G020660Cucurbita maxima (Rimu)cmacmoB797
CmoCh14G020660Cucurbita maxima (Rimu)cmacmoB885
CmoCh14G020660Wild cucumber (PI 183967)cmocpiB242
CmoCh14G020660Wild cucumber (PI 183967)cmocpiB263
CmoCh14G020660Cucumber (Chinese Long) v2cmocuB257
CmoCh14G020660Melon (DHL92) v3.5.1cmomeB199
CmoCh14G020660Watermelon (Charleston Gray)cmowcgB216
CmoCh14G020660Watermelon (Charleston Gray)cmowcgB225
CmoCh14G020660Watermelon (97103) v1cmowmB228
CmoCh14G020660Watermelon (97103) v1cmowmB241
CmoCh14G020660Cucurbita pepo (Zucchini)cmocpeB254
CmoCh14G020660Bottle gourd (USVL1VR-Ls)cmolsiB211
CmoCh14G020660Cucumber (Gy14) v2cgybcmoB717
CmoCh14G020660Melon (DHL92) v3.6.1cmomedB221
CmoCh14G020660Silver-seed gourdcarcmoB0319
CmoCh14G020660Silver-seed gourdcarcmoB0659
CmoCh14G020660Cucumber (Chinese Long) v3cmocucB0282
CmoCh14G020660Cucumber (Chinese Long) v3cmocucB0308
CmoCh14G020660Watermelon (97103) v2cmowmbB249