CsaV3_3G005050 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAATTGTACAAGCAACAAATATTTGGCAGAGACAATAGTGCCGATGAGCGATGACGACGAAGAAGTGGAGGAGATGCTGAGAAGGAGGCTAGTTGTCAAAAACGGAGCTCAGAAATGTTCAGCGAGTACCACGACGGAGTTGAAGATTAGGATCACAAAGAGAGAGCTGGAGAAGTTGTTGTGCAAAGTGGATGTGGAGGAGTTGCCAGTGACGGAGCTGTTATCCAAGTTAATCGATGTTGGCGATACATTCGAGAGTACCCATCAGCGATCATGGCGGCCTTCTTTGCAAAGTATTCCTGAAGTGAATTGAACAACATATATGTTAAATATTGTAAATATTGGATGTAGACAGGGGGAGTATTTTGAACCTACTTAGGACTATGATTGTTTTAAAGAGGTTTGATATATGACCACTTGAGTTGAATTATGCTCAGGTTGGGTTGAGAGATATAAGTATATACGTTTTAGTTTTCTCGATTTTATAGTTTTATATAAAAAAAAGAAGCGAAAATCGGAATTGCCATAAAAGAAGATATAGTCAAATAATGTTTTAGCTTGTTAGTTAAGCACAATTATATATCTGATATCATGATATTTGTAATAAACAATGTTGTATTAACAAGATGAAAAGAGGGGCTATTTGGAATATAGAGTTGGATATGATAATGTGTGAGTTAAAATATATTTTAGTGTGTATTTGAAATACAAAACTTTTTTTTGATTAGTCTTAGATAATTAATTGTGCTTAGCTGAAATTGATCGTTAGGTGATATCAGTAAAGAGAGAATAAAGATGTTATTTAAACCGTTGAATTGTATAACGGTCGTGTTTAGTGTTAAAATAATACACTTAATTACCATATATTTTAGCCTTATTCAACTCATTCTATGATGAGAAAATACCGTGTATTAAAAAAAAAAATGATTAATGTTAGAAACGGGTGTTGAATTAATTAGATTTTTTATTTTAAATAATTGTTAATTTTTGTTTCCAAAATTTATAGTTCAAGGAGTTTTTCACGAGCATTCGAATCAATAGAAATTCTAATGATTTTTTTTTTTTGGAGTTAGGGAGTTGTTTGTTAGGAGTTGAGTATCAAAACACTTAGTGCAACTGAAGCACGCACTTCTCATAAAATAAAATTCAATGTCACATGCTTTCTTAAACTTTTATTATTCTGATTAACATTTTTGTTGTTAATTTGTTTAACTTTGGTATTTCTGCTTAATTAGCTTTAAACAACCTTATTATTATTAATTTTTCTAAGACTTTGTGAATGTAAATACCTTTGCTTACATTTCCCAATTGAATCCTTGTGTTGAATTGATCACCTAAAACAAGATGGCTGGAAAACTTTGTCTAACTAAAAACTTGCATCAAACAAATCAAAAGAAAAGAAAAGGTTTACAATCAATGAAGGCACATACCTTGCATTCAAAACTTCCTTGTATGTGATTTTTTGAGCTCACCCTAGGCTCCTTATAGTGTGTTTCTTGAGCTTGCTCTCAACCCTCCTCCATACATCATTCATTTAAGTTGCATTTAGACTCCACAATTGAGTTTTCTAAGCTACCTCTTATTAAACTTTTATCTCTCTAGATGAACTCTCGATCTCAAGTTATCTCCTTGAATCTACAAGTTGATGTCACAACCAATGCACCTAGTCTTCATTTGACAACAATAATAATTGTTTTTATAAGGAAAGAGAGTGACCTGCAAAAATAAGATCACCTGGACACATGCACATGTGATGCTTTCCCACAGAAATTTTGAGTCTTAAACCCTAAAATAAATAAGGGGATAGTTGCAAATTTAGCCATTAGATGCAAAATAATTAAGTATATAGCAACATTTTTAAAAAATTGCAAATATAGCAAAATTTATCAAATTTTATCAATGATAGAAATCTATCACCGATAGACCATATTGTAAATATTGATATATTATTGATAGATCATACAAATCTATCAGTGATACAAGTCTATCAGCGATAGTCTTGCTATATTTGCAATTTCTTTTAAATGTTTCTATATTCTTAATTATTATTCCTAAAATGACCATCAATTATAATTATCCAGTAATTGTGTTTATATGAGTGTTCGAATTAGATTGTTCCAGTAAGGTTTTAGAGTAACATATGGTATAGATCTTCATCCTACCAAGTAGAAGGATGTGCCCTGCCATATCATGATTGGCTAGGGTTGTCACGTCCAAGCACTATCTCGGTTCATTTTGGTCCTAGGGTGATTCTTTTGGTTGGAAATACAGAAATATGCCTCATTAGTTATTTTGTAATTAGGTTCAACTAAGGTTGAGCATGTTGATTACTGCCCTACTTGAGTTTATCCTCCTCTCCAGAGTCTAAATTGGACATGAGGTGCAATTTTTTAGTCTAAATAACATTATTATCTTCTTTATTTTGGTCGATTTTAAGTTGTATTCTTACTTTACATCGAATATACCCTCTAATCCAAAAAGACAACTCATAACAGAGACCAACGTAAATAAAAAAAAAAAGGGTCTCATCACTTTCACTCTTCATTTTGGAATTGGGTGTGAAAATATGAACGAAAAACGAATAGGGGAAACAAAGTACTATAAATGATGACATGAGTTAGATGAGTTTTTGGTAAATCAAACTGTTTCTGATTAGCCATATTGCAGCTACTCAATTTTTATTCCAAGTGGACCAATTAATGAAATTAATTATTCAACTATATATATTATTTTGCAATTCCTTCAAATTTGGAACTTTGTGACATTTTCAAATAACAAAGGCTTATCCTCATGGAGGGTTGGTATGAAAAAGCTTACTTTTAATTTGGACTTCAACAACCCCTTTTAAAGAAGCAAAACATTTCATAAACAAACAAAATATATATTTGTATATATATATATATCACTAAACGTTATTGGCTAGAAAATAAGAGTTAACAAAGGAAATGACTTTTTCATTTTAATTGTAGTGAATGACATCAAAGTTAGCAACCATGTTTGAAAATTGTGAAGTAACAGCAGCCAAAATGTGAAAACCTTTATTATTATTTTCTTGGGTCAATTAGTGGTTAAGTTCACACTACATAATATTCATGTGGTTGAAGATTATTCTCCCTTTTATTACAATCACTCATCAATTGTCCCTTTCTCACAACTTGAATGTTGAATATAAATTTGACCTTTAAGAGTGGTTGGTCGTAGTCTTTTTGTAGGCTTAAATTTTGTGTTGAAGTAACTATTTCACTTCTGTTTTCACGTCATGACAACAATAGTAAGAGGTTCACGAACAATGTCGTCCTGTAGGGATGAGATTCACACAGATGGAGTAAACAAAACCATGTAGCCCCCCACTGGTTAGGAATATGAAGTCTTTATTGACTCGAGAAAGAAAGAGCAGATCTAAAAATTTATGAACAATTTTTTTTATGAACCGACATATATTTATATAAATATAGCAAATCACATAGTCTATTAGTGATAAAAGAATGAGATTTTGTTATATTTGAAAATATTTTATCTATTTTGCATCAAAAACAACTGCCCTAACTTCCATTCATGACCCTCCAACCTTTATTTACTTTTATCATTTTGTTTAAGTACTTAGATCATGTTTCATCGTGATTTCAAAAATAGTTACAATTACTTCTTCTTTTTTTGTTATTTTTGAAATTTTTGTTAAACATGTTTTTAATTAAAAAAAAAACCAATTATAATGATATGAGAATTATATCCAAAATGTAAAATTCTTTTTAACAAAATCACTATCATGTATTAAGATGCATTGCAAATTGCATCATTTTTATGCAAACCTACTCAAGTGTTTATTCATAAGTTGTCGCAGAGAAATTTTAAAAAAAATGAAAAGAAAGAAAGAATATTTTCCCTACGTTGAAGAAGGGATGTATATACGAAGATAAATACAACTTTACATGCATCAAAATAAATATATATATATTTTTATTTATTTTGGATAATTAAAACAGATAACTTTTATCTTTTTAAGATTTAATAGTAAAAGTATAG ATGGGAAATTGTACAAGCAACAAATATTTGGCAGAGACAATAGTGCCGATGAGCGATGACGACGAAGAAGTGGAGGAGATGCTGAGAAGGAGGCTAGTTGTCAAAAACGGAGCTCAGAAATGTTCAGCGAGTACCACGACGGAGTTGAAGATTAGGATCACAAAGAGAGAGCTGGAGAAGTTGTTGTGCAAAGTGGATGTGGAGGAGTTGCCAGTGACGGAGCTGTTATCCAAGTTAATCGATGTTGGCGATACATTCGAGAGTACCCATCAGCGATCATGGCGGCCTTCTTTGCAAATAAAAGTATAG ATGGGAAATTGTACAAGCAACAAATATTTGGCAGAGACAATAGTGCCGATGAGCGATGACGACGAAGAAGTGGAGGAGATGCTGAGAAGGAGGCTAGTTGTCAAAAACGGAGCTCAGAAATGTTCAGCGAGTACCACGACGGAGTTGAAGATTAGGATCACAAAGAGAGAGCTGGAGAAGTTGTTGTGCAAAGTGGATGTGGAGGAGTTGCCAGTGACGGAGCTGTTATCCAAGTTAATCGATGTTGGCGATACATTCGAGAGTACCCATCAGCGATCATGGCGGCCTTCTTTGCAAATAAAAGTATAG MGNCTSNKYLAETIVPMSDDDEEVEEMLRRRLVVKNGAQKCSASTTTELKIRITKRELEKLLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQIKV
BLAST of CsaV3_3G005050 vs. NCBI nr
Match: KGN56120.1 (hypothetical protein Csa_3G076560 [Cucumis sativus]) HSP 1 Score: 136.0 bits (341), Expect = 7.4e-29 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of CsaV3_3G005050 vs. NCBI nr
Match: XP_008463409.1 (PREDICTED: uncharacterized protein LOC103501580 [Cucumis melo]) HSP 1 Score: 119.4 bits (298), Expect = 7.2e-24 Identity = 79/99 (79.80%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of CsaV3_3G005050 vs. NCBI nr
Match: XP_022151029.1 (uncharacterized protein LOC111019048 [Momordica charantia]) HSP 1 Score: 108.2 bits (269), Expect = 1.7e-20 Identity = 64/102 (62.75%), Postives = 67/102 (65.69%), Query Frame = 0
BLAST of CsaV3_3G005050 vs. NCBI nr
Match: XP_022932152.1 (uncharacterized protein LOC111438472 [Cucurbita moschata]) HSP 1 Score: 103.6 bits (257), Expect = 4.1e-19 Identity = 59/99 (59.60%), Postives = 67/99 (67.68%), Query Frame = 0
BLAST of CsaV3_3G005050 vs. NCBI nr
Match: XP_022985276.1 (uncharacterized protein LOC111483315 [Cucurbita maxima]) HSP 1 Score: 99.0 bits (245), Expect = 1.0e-17 Identity = 61/101 (60.40%), Postives = 68/101 (67.33%), Query Frame = 0
BLAST of CsaV3_3G005050 vs. TAIR10
Match: AT4G21920.1 (unknown protein) HSP 1 Score: 43.5 bits (101), Expect = 9.1e-05 Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 0
BLAST of CsaV3_3G005050 vs. TrEMBL
Match: tr|A0A0A0L2D8|A0A0A0L2D8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G076560 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 4.9e-29 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of CsaV3_3G005050 vs. TrEMBL
Match: tr|A0A1S3CJ77|A0A1S3CJ77_CUCME (uncharacterized protein LOC103501580 OS=Cucumis melo OX=3656 GN=LOC103501580 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 4.8e-24 Identity = 79/99 (79.80%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of CsaV3_3G005050 vs. TrEMBL
Match: tr|B9SAC3|B9SAC3_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0584600 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.8e-08 Identity = 30/54 (55.56%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of CsaV3_3G005050 vs. TrEMBL
Match: tr|A0A0D2U1A6|A0A0D2U1A6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G438000 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.3e-08 Identity = 29/52 (55.77%), Postives = 46/52 (88.46%), Query Frame = 0
BLAST of CsaV3_3G005050 vs. TrEMBL
Match: tr|A0A2I4EY00|A0A2I4EY00_9ROSI (uncharacterized protein LOC108993715 OS=Juglans regia OX=51240 GN=LOC108993715 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 8.2e-08 Identity = 31/53 (58.49%), Postives = 47/53 (88.68%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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