Bhi11G000471 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G000471
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	DUF4228 domain protein
Location	chr11 : 14084370 .. 14084675 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAATTGTACGAGCAACAAATATTTGGCTGAGACGATGCCGATGAGCGATGAGGACGAGGAGGCAGTGGAGACAGTAAGGAGGAGGCTGGTTGTCCATGATGGAGCTCGGAAATGTTCGGCGAATACGACGACCGAGCTGAAGATCAGGATCACAAAGAGAGAGCTGGAGAAATTATTGAGCAAAGTTGATGTGGAGGAGCTGCCAGTGACGGAGCTGTTATCGCAGTTAATCGATGTCGGTGATGCGTTCGAGAGTACTCACCAGCGATCATGGCGGCCTTCTTTGCAAAGTATTCCAGAG

mRNA sequence

ATGGGAAATTGTACGAGCAACAAATATTTGGCTGAGACGATGCCGATGAGCGATGAGGACGAGGAGGCAGTGGAGACAGTAAGGAGGAGGCTGGTTGTCCATGATGGAGCTCGGAAATGTTCGGCGAATACGACGACCGAGCTGAAGATCAGGATCACAAAGAGAGAGCTGGAGAAATTATTGAGCAAAGTTGATGTGGAGGAGCTGCCAGTGACGGAGCTGTTATCGCAGTTAATCGATGTCGGTGATGCGTTCGAGAGTACTCACCAGCGATCATGGCGGCCTTCTTTGCAAAGTATTCCAGAG

Coding sequence (CDS)

ATGGGAAATTGTACGAGCAACAAATATTTGGCTGAGACGATGCCGATGAGCGATGAGGACGAGGAGGCAGTGGAGACAGTAAGGAGGAGGCTGGTTGTCCATGATGGAGCTCGGAAATGTTCGGCGAATACGACGACCGAGCTGAAGATCAGGATCACAAAGAGAGAGCTGGAGAAATTATTGAGCAAAGTTGATGTGGAGGAGCTGCCAGTGACGGAGCTGTTATCGCAGTTAATCGATGTCGGTGATGCGTTCGAGAGTACTCACCAGCGATCATGGCGGCCTTCTTTGCAAAGTATTCCAGAG

Protein sequence

MGNCTSNKYLAETMPMSDEDEEAVETVRRRLVVHDGARKCSANTTTELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESTHQRSWRPSLQSIPE

Homology

[Close]

BLAST of Bhi11G000471 vs. TAIR10
Match: AT4G21920.1 (unknown protein)

HSP 1 Score: 49.3 bits (116), Expect = 1.6e-06
Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 47  ELKIRITKRELEKLLSKVDVEELPVTELLSQLI-DVGDAF------ESTHQRSWRPSLQS 103
           E+KIRITK+ELE L+  + ++ L   E+LS+LI + GD         + H + W+P LQS
Sbjct: 65  EIKIRITKKELEDLMRNIGLKSLTAEEILSKLIFEGGDQIGFSAVDVTNHHQPWKPVLQS 124

[Close]

BLAST of Bhi11G000471 vs. TAIR10
Match: AT3G10120.1 (unknown protein)

HSP 1 Score: 40.0 bits (92), Expect = 1.0e-03
Identity = 32/100 (32.00%), Postives = 47/100 (47.00%), Query Frame = 0


Query: 6   SNKYLAETMP---MSDEDEEAVETVRRRLVVHDGARKCSANTTTELKIRITKRELEKLLS 65
           S K++ +TM     ++ + E  E    RL       K   N    +K+ ++K+ELEKLL 
Sbjct: 74  SIKHMKKTMKKVRFANPEVEKEEQEEDRLTDCCDNTKEKTNGVVRVKMVVSKQELEKLLQ 133

Query: 66  KVDVEELPVTELLSQLIDVGDAFESTHQRSWRPSLQSIPE 103
              V E+    L  Q   + D  +  H+  WRP L SIPE
Sbjct: 134 GGSVHEMVYRTLAKQ--HLCDDDDECHKEGWRPLLDSIPE 171

[Close]

BLAST of Bhi11G000471 vs. TrEMBL
Match: tr|A0A1S3CJ77|A0A1S3CJ77_CUCME (uncharacterized protein LOC103501580 OS=Cucumis melo OX=3656 GN=LOC103501580 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.0e-32
Identity = 75/102 (73.53%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MGNCTSNKYLAETMPMSDEDEEAVETVRRRLVVHDGARKCSANTTTELKIRITKRELEKL 60
           MGNCTSNKYLAETMPMSD                  A+KCSA+TTTELKIRITK+ELEKL
Sbjct: 1   MGNCTSNKYLAETMPMSDXXXXXXXXXXXXXXXESRAQKCSASTTTELKIRITKKELEKL 60

Query: 61  LSKVDVEELPVTELLSQLIDVGDAFESTHQRSWRPSLQSIPE 103
           L KVD+EELPV ELLS+LIDVGDAFESTH+RSW+PSLQSIPE
Sbjct: 61  LCKVDMEELPVAELLSKLIDVGDAFESTHRRSWQPSLQSIPE 102

[Close]

BLAST of Bhi11G000471 vs. TrEMBL
Match: tr|A0A0A0L2D8|A0A0A0L2D8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G076560 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.0e-26
Identity = 71/103 (68.93%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 1   MGNCTSNKYLAET-MPMSDEDEEAVETVRRRLVVHDGARKCSANTTTELKIRITKRELEK 60
           MGNCTSNKYLAET +PMS                           TTELKIRITKRELEK
Sbjct: 1   MGNCTSNKYLAETIVPMSXXXXXXXXXXXXXXXXXXXXXXXXXXXTTELKIRITKRELEK 60

Query: 61  LLSKVDVEELPVTELLSQLIDVGDAFESTHQRSWRPSLQSIPE 103
           LL KVDVEELPVTELLS+LIDVGD FESTHQRSWRPSLQSIPE
Sbjct: 61  LLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQSIPE 103

[Close]

BLAST of Bhi11G000471 vs. TrEMBL
Match: tr|A0A0A0L7M3|A0A0A0L7M3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G076570 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-12
Identity = 54/113 (47.79%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 1   MGNCTSNKYLAETMPMSDEDEEAVETVRRRLVVHDGA-RKCSANTTTELKIRITKRELEK 60
           MGNC S+  L         DEEA+E ++RR++ +D   R   A TTTE+KI+ITK+ELE 
Sbjct: 1   MGNCVSSNCLCGKPTRILSDEEALEMMKRRIMAYDETPRSSKAATTTEVKIKITKKELEM 60

Query: 61  LLSKVDV----EELPVTELLS------QLIDVGDAFESTHQRSWRPSLQSIPE 103
           LL    V    +ELP     S      Q ID+ DAFE    RSWRPSLQSIPE
Sbjct: 61  LLGNYTVVEVKDELPSAHFFSQPIVELQPIDIDDAFE-MQPRSWRPSLQSIPE 112

[Close]

BLAST of Bhi11G000471 vs. TrEMBL
Match: tr|A0A2N9EX09|A0A2N9EX09_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11168 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.4e-12
Identity = 40/62 (64.52%), Postives = 53/62 (85.48%), Query Frame = 0


Query: 41  SANTTTELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESTHQRSWRPSLQSI 100
           S NTTTE+KI+ITK++LE+LL KVD++EL V ++L+QLI+V D   +THQR WRP+LQSI
Sbjct: 59  STNTTTEVKIKITKKQLEELLGKVDLKELSVQQVLAQLINVSDRC-ATHQRPWRPALQSI 118

Query: 101 PE 103
           PE
Sbjct: 119 PE 119

[Close]

BLAST of Bhi11G000471 vs. TrEMBL
Match: tr|B9SAC3|B9SAC3_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0584600 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.6e-11
Identity = 36/59 (61.02%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 44  TTTELKIRITKRELEKLLSKVDVEELPVTELLSQLIDVGDAFESTHQRSWRPSLQSIPE 103
           T+TE+KI+ITK++LE+LL +VD++EL + ++L+QL+ VGD    THQRSWRP+LQSIPE
Sbjct: 56  TSTEVKIKITKKQLEELLGRVDMKELSIEQVLAQLMKVGDPSFETHQRSWRPNLQSIPE 114

[Close]

BLAST of Bhi11G000471 vs. NCBI nr
Match: XP_022151029.1 (uncharacterized protein LOC111019048 [Momordica charantia])

HSP 1 Score: 147.9 bits (372), Expect = 1.9e-32
Identity = 82/106 (77.36%), Postives = 87/106 (82.08%), Query Frame = 0


Query: 1   MGNCTSNKYLAETMPMSDEDEEAVETVRRRLVV----HDGARKCSANTTTELKIRITKRE 60
           MGNCTSNKY AE  PMSDE EEAVETV+RRL+     H   R  S   TTE+KIRITKRE
Sbjct: 1   MGNCTSNKYSAEISPMSDE-EEAVETVKRRLIPDDDGHGALRSSSLARTTEVKIRITKRE 60

Query: 61  LEKLLSKVDVEELPVTELLSQLIDVGDAFESTHQRSWRPSLQSIPE 103
           LEKLL KVDVEELPVTELLSQLIDVGDAFESTH+RSWRPSLQ+I E
Sbjct: 61  LEKLLRKVDVEELPVTELLSQLIDVGDAFESTHRRSWRPSLQTIHE 105

[Close]

BLAST of Bhi11G000471 vs. NCBI nr
Match: XP_022932152.1 (uncharacterized protein LOC111438472 [Cucurbita moschata])

HSP 1 Score: 147.9 bits (372), Expect = 1.9e-32
Identity = 79/102 (77.45%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 1   MGNCTSNKYLAETMPMSDEDEEAVETVRRRLVVHDGARKCSANTTTELKIRITKRELEKL 60
           MGNCTSNKYLAETMPMS E+EE VETV+R+L   DGA +    TTTE+KIR+TKRELEKL
Sbjct: 1   MGNCTSNKYLAETMPMS-EEEEVVETVKRKLNADDGASR--GTTTTEVKIRMTKRELEKL 60

Query: 61  LSKVDVEELPVTELLSQLIDVGDAFESTHQRSWRPSLQSIPE 103
           LSKV+VEELPVTELL Q+I+VGD  ESTH+RSWRPSLQSIPE
Sbjct: 61  LSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSIPE 99

[Close]

BLAST of Bhi11G000471 vs. NCBI nr
Match: XP_008463409.1 (PREDICTED: uncharacterized protein LOC103501580 [Cucumis melo])

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 75/102 (73.53%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MGNCTSNKYLAETMPMSDEDEEAVETVRRRLVVHDGARKCSANTTTELKIRITKRELEKL 60
           MGNCTSNKYLAETMPMSD                  A+KCSA+TTTELKIRITK+ELEKL
Sbjct: 1   MGNCTSNKYLAETMPMSDXXXXXXXXXXXXXXXESRAQKCSASTTTELKIRITKKELEKL 60

Query: 61  LSKVDVEELPVTELLSQLIDVGDAFESTHQRSWRPSLQSIPE 103
           L KVD+EELPV ELLS+LIDVGDAFESTH+RSW+PSLQSIPE
Sbjct: 61  LCKVDMEELPVAELLSKLIDVGDAFESTHRRSWQPSLQSIPE 102

[Close]

BLAST of Bhi11G000471 vs. NCBI nr
Match: XP_022985276.1 (uncharacterized protein LOC111483315 [Cucurbita maxima])

HSP 1 Score: 143.3 bits (360), Expect = 4.6e-31
Identity = 78/105 (74.29%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 1   MGNCTSNKYLAETMPMSDEDEEAVETVRRRLVVHDGARKCSANT---TTELKIRITKREL 60
           MGNCTSNKYLAETMPMS E+EE VET++R+L   DGA + S  T     E+KIR+TKREL
Sbjct: 1   MGNCTSNKYLAETMPMS-EEEELVETLKRKLNADDGASRSSRGTXXXXXEVKIRMTKREL 60

Query: 61  EKLLSKVDVEELPVTELLSQLIDVGDAFESTHQRSWRPSLQSIPE 103
           EKLLSKV+VEELPVTELL QLI+VGD  ESTH+RSWRPSLQSIPE
Sbjct: 61  EKLLSKVEVEELPVTELLLQLIEVGDESESTHRRSWRPSLQSIPE 104

[Close]

BLAST of Bhi11G000471 vs. NCBI nr
Match: KGN56120.1 (hypothetical protein Csa_3G076560 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 7.6e-26
Identity = 71/103 (68.93%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 1   MGNCTSNKYLAET-MPMSDEDEEAVETVRRRLVVHDGARKCSANTTTELKIRITKRELEK 60
           MGNCTSNKYLAET +PMS                           TTELKIRITKRELEK
Sbjct: 1   MGNCTSNKYLAETIVPMSXXXXXXXXXXXXXXXXXXXXXXXXXXXTTELKIRITKRELEK 60

Query: 61  LLSKVDVEELPVTELLSQLIDVGDAFESTHQRSWRPSLQSIPE 103
           LL KVDVEELPVTELLS+LIDVGD FESTHQRSWRPSLQSIPE
Sbjct: 61  LLCKVDVEELPVTELLSKLIDVGDTFESTHQRSWRPSLQSIPE 103

The following BLAST results are available for this feature:

BLAST of Bhi11G000471 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G21920.1	1.6e-06	44.44	unknown protein	[more]
AT3G10120.1	1.0e-03	32.00	unknown protein	[more]

BLAST of Bhi11G000471 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi11G000471 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CJ77\|A0A1S3CJ77_CUCME	8.0e-32	73.53	uncharacterized protein LOC103501580 OS=Cucumis melo OX=3656 GN=LOC103501580 PE=...	[more]
tr\|A0A0A0L2D8\|A0A0A0L2D8_CUCSA	5.0e-26	68.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G076560 PE=4 SV=1	[more]
tr\|A0A0A0L7M3\|A0A0A0L7M3_CUCSA	1.4e-12	47.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G076570 PE=4 SV=1	[more]
tr\|A0A2N9EX09\|A0A2N9EX09_FAGSY	5.4e-12	64.52	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11168 PE=4 SV=1	[more]
tr\|B9SAC3\|B9SAC3_RICCO	1.6e-11	61.02	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0584600 PE=4 SV=1	[more]

BLAST of Bhi11G000471 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151029.1	1.9e-32	77.36	uncharacterized protein LOC111019048 [Momordica charantia]	[more]
XP_022932152.1	1.9e-32	77.45	uncharacterized protein LOC111438472 [Cucurbita moschata]	[more]
XP_008463409.1	1.2e-31	73.53	PREDICTED: uncharacterized protein LOC103501580 [Cucumis melo]	[more]
XP_022985276.1	4.6e-31	74.29	uncharacterized protein LOC111483315 [Cucurbita maxima]	[more]
KGN56120.1	7.6e-26	68.93	hypothetical protein Csa_3G076560 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006979	response to oxidative stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000471	Bhi11M000471	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR33647	FAMILY NOT NAMED	coord: 1..102
None	No IPR available	PANTHER	PTHR33647:SF5	SUBFAMILY NOT NAMED	coord: 1..102

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi11G000471	Csa3G076560	Cucumber (Chinese Long) v2	cuwgoB218
Bhi11G000471	MELO3C025367	Melon (DHL92) v3.5.1	mewgoB499
Bhi11G000471	ClCG10G005340	Watermelon (Charleston Gray)	wcgwgoB080
Bhi11G000471	CSPI03G05050	Wild cucumber (PI 183967)	cpiwgoB218
Bhi11G000471	Cucsa.060020	Cucumber (Gy14) v1	cgywgoB049
Bhi11G000471	CmaCh04G009600	Cucurbita maxima (Rimu)	cmawgoB0821
Bhi11G000471	CmaCh16G008680	Cucurbita maxima (Rimu)	cmawgoB0421
Bhi11G000471	CmoCh16G008930	Cucurbita moschata (Rifu)	cmowgoB0406
Bhi11G000471	Lsi05G005870	Bottle gourd (USVL1VR-Ls)	lsiwgoB410
Bhi11G000471	Cp4.1LG14g07320	Cucurbita pepo (Zucchini)	cpewgoB0272
Bhi11G000471	Cp4.1LG01g08040	Cucurbita pepo (Zucchini)	cpewgoB0484
Bhi11G000471	CsGy3G005120	Cucumber (Gy14) v2	cgybwgoB209
Bhi11G000471	MELO3C025367.2	Melon (DHL92) v3.6.1	medwgoB499
Bhi11G000471	Carg00075	Silver-seed gourd	carwgoB0777
Bhi11G000471	CsaV3_3G005050	Cucumber (Chinese Long) v3	cucwgoB223
Bhi11G000471	Cla005317	Watermelon (97103) v1	wgowmB009
Bhi11G000471	Cla97C10G189580	Watermelon (97103) v2	wgowmbB003

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi11G000471	Cucurbita maxima (Rimu)	cmawgoB0980
Bhi11G000471	Cucurbita moschata (Rifu)	cmowgoB0817