Csa5G457240 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G457240
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Protein SENSITIVITY TO RED LIGHT REDUCED, putative; contains IPR012942 (Sensitivity To Red Light Reduced-like, SRR1)
Location	Chr5 : 16156522 .. 16158869 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATGTTATTGCTATAGTTGATGTTTTTCTTGAGAACACTAACCATATATTTTTCTATTTAATAAACATATAATACATACTCCAGATATATAGAAATCTTAATATACAATAGAAGATTCATGAGATAATGCAAGGGAAGCACAAATTTACATAAATGGCTTAGCACGCCGCTTGAGTTTAAGCCGTGAGCCGATTCTAAGTGGCTTAGCACGGCTCACATCTAGCTGAAGGCGCGGCTCAAGCCCTTTCGCCCGAGCCACGATCAGCACGCCACTTGAGCTCAAGCTGTGAGCCGATCCCTTTCGCCCGTGAGCCGATTCCAAGAGGCTCGGCTTACGGTTCACAGCTAGGGGTGAAGGGCGCGGCTCAAGCCCCTTTCGCCCGAGCCACGATCAGCACGCCACTTGAGCTCAAGCTGTGAGCCGATCCCTTTCGCCCGTGAGCCGATTCCAAGAGGCTCGGCTTACGGTTCACAGCTAGGGGTGAAGGGCGCGGCTCAAGCCCCTTTCGCCCGAGCCACGAGCAGCACGCCCCTTGAGCTCAAGCCGTGAGCACGCCCCTTTCGTACGAGCAGACTGACGTACAACCAATGAACTATCAGTGGAATCAAATCCGCTGCCTTTTGCATCCACGAAAAGAGAACAATCGAAAACCAATCAGGTCTGTGAATCAAAATCCATTTTAATTCATTCTCCATTGGCTCCCACTCAAACTTGTTCTGTTCATGTGTTTTTGGTTACTGACTTCGATTTCATTCCACTGGATTTTCTTCACCTTCTCACTTATTTCGTTACATACAATTCCGTGCTCGCCATTCAATTTGGCCATCCTTCGATTGAATCTTAACCTAGTTTACTCTAAATCTTCCGTTAAATGTTCAGCAGTACTTTGATGGCGCTGAATCTTTTGATTTAATGCGGAATTTTCATGTTGCTTTCTTGATAACTCTAGGTTAGGAACGAGAAGCTGTATCGTCTCGACGGGATGGCAGCGTCGGCAAAAACTGTCTCCATTCCAGATCAGTCAAATAGTGGGGACTGGACGGTTGTTCTTCCTCGTCGTGGCAAGCAGAAGAAAACTTTTCCGAAGCTCAGGATTCGAGAAGATCAACGGACTTGGTCTCCCACTGATCAGGCCAATGATACAATTAGAGAATCGAAACTGTTGCAGAAGATGGAAATCTGTATAAAAAAACTTGAGAATTCCCAATTTTATCAAACTCTTGTTGAGGAGCTTGAAACAATGCCATTCTTGGAATCGTTAAATAGGGTTTTGGGCTCGGAGTCAAAGATGGGGATGGTTGTCTATGGCGTAGGAAGCATTGAGAATTATGAAAATCCTCGATTGCAGCTTAGTCTTGCAATATTGTTGAAGAGAAAATTTAGTTGGATTGAAAGTTTGGAGGTGTTTGATCCAATTCTTTCTGCAACTGAATGTCGATTAATGGAATCCTTTGGTTGTTCTGTTCTATCATTTAATGAACAAGGAAGACGATGTGCAGAGAAGCCAACAATGTTCTTCATGCCCCATTGTGAAGCAGAGTTGTACAACAATCTTTTACAGGAAAATTGGAAGGTTGGGCTGTTGAATCATATTGTGTTGTTTGGGAATAGCTTTGAGATTTATGAACAGTTTGTATCTGAATTCAAAAACTCACCCGTTGTTGATTCATCGAAGTTCATCTTGGCCTCAAGAAAGTTCATACGGGAGATCAAAATCAAGACAGTTTCAGATGATTATTTTGGTGCGTTTCATGATTCAAGTTGGCAATTTTTCAGCCCTGTTTCACCACTGGAGCTGCAATTCATAGATCTTTGAAGGACATTGCTTAGTGATTGAAGAAACAGCCAGGTAAATTCATTGTCATGATTGAACATGGATTTTGTTCTTTTATCTCAAAATTTTGGTAAAATGCAAGTATAGGAGTGTTTGCTTGACTCCCTTTCCTCAGTATGGTGATAATTTTTGTTCCACACCGAAGACAATGTCAAGGACATAACTGTGTGAGTGGTGAAACCTATAGAACAGATCCCGTCCAAGGCCGTAAGAGAAAGCATACAGTCTGAAACAGCCTTGTTGGTATCATGCTCTAAGATCTGCTATTTGCTAGGGAACAGCTTTCTAGAGAGTTGAGATTAGCGATTTACATTACCTTATAGATGAGGACTCTTGAGAACCATACTTTTCTCATTTTTAGGCGTAGATTGATTTCTATCTCACAACTATGATGAACTGAGTGTTCACTTGGTAGTAGGTAAACAATGTAGTTATTTTTGCCAAGGATATTGATGAATAGGAACTTGCTATACTTGATCAATTATTTGATTTGAATATCATTTTAGA

mRNA sequence

ATGGAAAATGTTATTGCTATAGTTGATCACGGCTCACATCTAGCTGAAGGCGCGGCTCAAGCCCTTTCGCCCGAGCCACGATCAGCACGCCACTTGAGCTCAAGCTGTGAGCCGATCCCTTTCGCCCGTGAGCCGATTCCAAGAGGCTCGGCTTACGGTTCACAGCTAGGGGTGAAGGGCGCGGCTCAAGCCCCTTTCGCCCGAGCCACGATCAGCACGCCACTTGAGCTCAAGCTAGGCTCGGCTTACGGTTCACAGCTAGGGGTGAAGGGCGCGGCTCAAGCCCCTTTCGCCCGAGCCACGAGCAGCACGCCCCTTGAGCTCAAGCCAGAACAATCGAAAACCAATCAGGTTAGGAACGAGAAGCTGTATCGTCTCGACGGGATGGCAGCGTCGGCAAAAACTGTCTCCATTCCAGATCAGTCAAATAGTGGGGACTGGACGGTTGTTCTTCCTCGTCGTGGCAAGCAGAAGAAAACTTTTCCGAAGCTCAGGATTCGAGAAGATCAACGGACTTGGTCTCCCACTGATCAGGCCAATGATACAATTAGAGAATCGAAACTGTTGCAGAAGATGGAAATCTGTATAAAAAAACTTGAGAATTCCCAATTTTATCAAACTCTTGTTGAGGAGCTTGAAACAATGCCATTCTTGGAATCGTTAAATAGGGTTTTGGGCTCGGAGTCAAAGATGGGGATGGTTGTCTATGGCGTAGGAAGCATTGAGAATTATGAAAATCCTCGATTGCAGCTTAGTCTTGCAATATTGTTGAAGAGAAAATTTAGTTGGATTGAAAGTTTGGAGGTGTTTGATCCAATTCTTTCTGCAACTGAATGTCGATTAATGGAATCCTTTGGTTGTTCTGTTCTATCATTTAATGAACAAGGAAGACGATGTGCAGAGAAGCCAACAATGTTCTTCATGCCCCATTGTGAAGCAGAGTTGTACAACAATCTTTTACAGGAAAATTGGAAGGTTGGGCTGTTGAATCATATTGTGTTGTTTGGGAATAGCTTTGAGATTTATGAACAGTTTGTATCTGAATTCAAAAACTCACCCGTTGTTGATTCATCGAAGTTCATCTTGGCCTCAAGAAAGTTCATACGGGAGATCAAAATCAAGACAGTTTCAGATGATTATTTTGGTGCGTTTCATGATTCAAGTTGGCAATTTTTCAGCCCTGTTTCACCACTGGAGCTGCAATTCATAGATCTTTGA

Coding sequence (CDS)

ATGGAAAATGTTATTGCTATAGTTGATCACGGCTCACATCTAGCTGAAGGCGCGGCTCAAGCCCTTTCGCCCGAGCCACGATCAGCACGCCACTTGAGCTCAAGCTGTGAGCCGATCCCTTTCGCCCGTGAGCCGATTCCAAGAGGCTCGGCTTACGGTTCACAGCTAGGGGTGAAGGGCGCGGCTCAAGCCCCTTTCGCCCGAGCCACGATCAGCACGCCACTTGAGCTCAAGCTAGGCTCGGCTTACGGTTCACAGCTAGGGGTGAAGGGCGCGGCTCAAGCCCCTTTCGCCCGAGCCACGAGCAGCACGCCCCTTGAGCTCAAGCCAGAACAATCGAAAACCAATCAGGTTAGGAACGAGAAGCTGTATCGTCTCGACGGGATGGCAGCGTCGGCAAAAACTGTCTCCATTCCAGATCAGTCAAATAGTGGGGACTGGACGGTTGTTCTTCCTCGTCGTGGCAAGCAGAAGAAAACTTTTCCGAAGCTCAGGATTCGAGAAGATCAACGGACTTGGTCTCCCACTGATCAGGCCAATGATACAATTAGAGAATCGAAACTGTTGCAGAAGATGGAAATCTGTATAAAAAAACTTGAGAATTCCCAATTTTATCAAACTCTTGTTGAGGAGCTTGAAACAATGCCATTCTTGGAATCGTTAAATAGGGTTTTGGGCTCGGAGTCAAAGATGGGGATGGTTGTCTATGGCGTAGGAAGCATTGAGAATTATGAAAATCCTCGATTGCAGCTTAGTCTTGCAATATTGTTGAAGAGAAAATTTAGTTGGATTGAAAGTTTGGAGGTGTTTGATCCAATTCTTTCTGCAACTGAATGTCGATTAATGGAATCCTTTGGTTGTTCTGTTCTATCATTTAATGAACAAGGAAGACGATGTGCAGAGAAGCCAACAATGTTCTTCATGCCCCATTGTGAAGCAGAGTTGTACAACAATCTTTTACAGGAAAATTGGAAGGTTGGGCTGTTGAATCATATTGTGTTGTTTGGGAATAGCTTTGAGATTTATGAACAGTTTGTATCTGAATTCAAAAACTCACCCGTTGTTGATTCATCGAAGTTCATCTTGGCCTCAAGAAAGTTCATACGGGAGATCAAAATCAAGACAGTTTCAGATGATTATTTTGGTGCGTTTCATGATTCAAGTTGGCAATTTTTCAGCCCTGTTTCACCACTGGAGCTGCAATTCATAGATCTTTGA

Protein sequence

MENVIAIVDHGSHLAEGAAQALSPEPRSARHLSSSCEPIPFAREPIPRGSAYGSQLGVKGAAQAPFARATISTPLELKLGSAYGSQLGVKGAAQAPFARATSSTPLELKPEQSKTNQVRNEKLYRLDGMAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQANDTIRESKLLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENPRLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFFMPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKFIREIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL*

Homology

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BLAST of Csa5G457240 vs. Swiss-Prot
Match: SRR1_ARATH (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana GN=SRR1 PE=2 SV=2)

HSP 1 Score: 275.0 bits (702), Expect = 1.3e-72
Identity = 135/261 (51.72%), Postives = 191/261 (73.18%), Query Frame = 1


Query: 137 SIPDQSNSGDWTVVLP---RRGKQKKTFPKLRIREDQRTWSPTDQANDTIRESKLLQKME 196
           ++ + S+ G+W VVLP   R+G+++K  PK +  E+++ W   D   D  R+++L QKME
Sbjct: 4   TVKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKME 63

Query: 197 ICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENPRLQLSL 256
           I +KK+E+S FY   +E+L++      +  VLGSE+++ MV+YG+GSIE+YE+PR QLS+
Sbjct: 64  ISLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSI 123

Query: 257 AILLKRKFSWI-ESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFFMPHCE 316
           AIL+KR+F W+ +++EVFDP+LSATE   +ES GCSVLS NEQ RR A KPT+FFMPHCE
Sbjct: 124 AILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCE 183

Query: 317 AELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKFIREIK 376
           A LY+NLLQ NW++  L+ I LFGNSF++YE+ VS   ++ V+ ++K I+A+++   E  
Sbjct: 184 ANLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVS--FDAEVICATKRIIAAQRVTSEFA 243

Query: 377 IKTVSDDYFGAFHDSSWQFFS 394
           I+T SDDYF AFHDSSW FFS
Sbjct: 244 IETESDDYFAAFHDSSWHFFS 262

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BLAST of Csa5G457240 vs. Swiss-Prot
Match: SRR1L_MOUSE (SRR1-like protein OS=Mus musculus GN=Srrd PE=2 SV=4)

HSP 1 Score: 95.1 bits (235), Expect = 1.8e-18
Identity = 73/218 (33.49%), Postives = 108/218 (49.54%), Query Frame = 1


Query: 147 WTVVLPRRGKQKKTFPKLRIREDQRTWSPTD--QANDTIRESKL-LQKMEICIKKLENSQ 206
           W+ V PRR K +    + R  E  R     D       +RE++  L+  + C   LE   
Sbjct: 9   WSAVAPRRRK-RAAGRRPRPGEGPRAEPEADGEAVLRRLREAEEDLRISDFCSSALET-- 68

Query: 207 FYQTLVEELETM-PFLESLNRV-LGSE-------------SKMGMVVYGVGSIENYENPR 266
             + L ++LE + P  E+L R+ LGS              S +  V YG+G+  +    R
Sbjct: 69  ITECLRKQLEQLQPLTEALGRLHLGSSLPSASQEPLASSASHVKCVCYGLGTFASCPTAR 128

Query: 267 LQLSLAILLKRKFSWIES-LEVFDPILSATECRLMESFGCSVLSFNEQGRRCAE-KPTMF 326
           +QL+  +L   K     S   V+DP+ S TE  ++ S G +VLS NE+G+R  + +PT+F
Sbjct: 129 IQLAFMLLFLEKCQVPRSHCWVYDPLFSQTEVSVLTSLGVTVLSENEEGKRSVQGQPTVF 188

Query: 327 FMPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQ 345
           +MPHC   LYNNLL  NW    L+ +++ GNSF   E+
Sbjct: 189 YMPHCGTALYNNLLWSNWSADALSRVLIIGNSFRGLEE 223

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BLAST of Csa5G457240 vs. Swiss-Prot
Match: SRR1L_HUMAN (SRR1-like protein OS=Homo sapiens GN=SRRD PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.7e-17
Identity = 64/177 (36.16%), Postives = 93/177 (52.54%), Query Frame = 1


Query: 234 VVYGVGSIENYENPRLQLSLAILLKRKFSWIES-LEVFDPILSATECRLMESFGCSVLSF 293
           V YG+G+       R QL+  +LL  K     S   V+DP+ S  E  ++ + G +VLS 
Sbjct: 142 VCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYDPLFSQLEIEVLNTLGVTVLSE 201

Query: 294 NEQGRRCAE-KPTMFFMPHCEAELYNNLLQENWKVGLLNHIVLFGNSFE-IYEQFVSEF- 353
           NE+G+R    +PT+F+M HC   LYNNLL  NW V  L+ +V+ GNSF+ + E+ ++   
Sbjct: 202 NEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALSKMVIIGNSFKGLEERLLARIL 261

Query: 354 -KNSPVVDSSKFILASRKFIREIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL 406
            KN P      +I    K + E++    S  Y   F+D+S  +F PV  LE   ID+
Sbjct: 262 QKNYP------YIAKILKGLEELEFPQTS-QYMDIFNDTSVHWF-PVQKLEQLSIDI 310

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BLAST of Csa5G457240 vs. TrEMBL
Match: A0A0A0KRU2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G457240 PE=4 SV=1)

HSP 1 Score: 805.4 bits (2079), Expect = 3.1e-230
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 1


Query: 1   MENVIAIVDHGSHLAEGAAQALSPEPRSARHLSSSCEPIPFAREPIPRGSAYGSQLGVKG 60
           MENVIAIVDHGSHLAEGAAQALSPEPRSARHLSSSCEPIPFAREPIPRGSAYGSQLGVKG
Sbjct: 1   MENVIAIVDHGSHLAEGAAQALSPEPRSARHLSSSCEPIPFAREPIPRGSAYGSQLGVKG 60

Query: 61  AAQAPFARATISTPLELKLGSAYGSQLGVKGAAQAPFARATSSTPLELKPEQSKTNQVRN 120
           AAQAPFARATISTPLELKLGSAYGSQLGVKGAAQAPFARATSSTPLELKPEQSKTNQVRN
Sbjct: 61  AAQAPFARATISTPLELKLGSAYGSQLGVKGAAQAPFARATSSTPLELKPEQSKTNQVRN 120

Query: 121 EKLYRLDGMAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQAN 180
           EKLYRLDGMAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQAN
Sbjct: 121 EKLYRLDGMAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQAN 180

Query: 181 DTIRESKLLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGS 240
           DTIRESKLLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGS
Sbjct: 181 DTIRESKLLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGS 240

Query: 241 IENYENPRLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCA 300
           IENYENPRLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCA
Sbjct: 241 IENYENPRLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCA 300

Query: 301 EKPTMFFMPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKF 360
           EKPTMFFMPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKF
Sbjct: 301 EKPTMFFMPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKF 360

Query: 361 ILASRKFIREIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL 406
           ILASRKFIREIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL
Sbjct: 361 ILASRKFIREIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL 405

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BLAST of Csa5G457240 vs. TrEMBL
Match: A5B9I4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012927 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 4.9e-95
Identity = 179/269 (66.54%), Postives = 214/269 (79.55%), Query Frame = 1


Query: 129 MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIRED-QRTWSPTDQANDTIRESK 188
           MAASAKT+++       DWTVVLP RGK ++ F K +  E  Q+ W+PTD   D  RESK
Sbjct: 1   MAASAKTITLESSDAISDWTVVLPXRGKXRRNFLKSKHPEQHQQPWAPTDLEMDLHRESK 60

Query: 189 LLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENP 248
           L+QK++ICI+KL NS FY  L+++++T   LE+  RVLGSE KM MVVYG+GSIE+YE P
Sbjct: 61  LMQKIQICIRKLGNSTFYHVLLDQVQTPHMLEAFLRVLGSELKMQMVVYGIGSIESYEPP 120

Query: 249 RLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFF 308
           RLQLSLAILLKRKFSWI  ++VFDPILSATE R++E+ GCSVLS NEQGRR A KPT+FF
Sbjct: 121 RLQLSLAILLKRKFSWIGDIKVFDPILSATESRVLEALGCSVLSVNEQGRRQASKPTLFF 180

Query: 309 MPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKF 368
           MPHCEAELY+NLLQENW+   +N+IVLFGNSF  YEQ VSEF++S +VDSS+ ILA RKF
Sbjct: 181 MPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVDSSRHILAVRKF 240

Query: 369 IREIKIKTVSDDYFGAFHDSSWQFFSPVS 397
            RE  IKTVSDDYFGAFHDSSW FFS V+
Sbjct: 241 TREFAIKTVSDDYFGAFHDSSWHFFSLVA 269

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BLAST of Csa5G457240 vs. TrEMBL
Match: B9S4K4_RICCO (Protein SENSITIVITY TO RED LIGHT REDUCED, putative OS=Ricinus communis GN=RCOM_0809580 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 6.5e-95
Identity = 171/274 (62.41%), Postives = 221/274 (80.66%), Query Frame = 1


Query: 129 MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRI-REDQRTWSPTDQANDTIRESK 188
           M ASAK +++ + + +G+WTVVLP RGK+ + F K+R   E Q+ W P D  +D+ R+SK
Sbjct: 1   MDASAKILTVDNHTCNGEWTVVLP-RGKRSRNFSKIRTPEEQQQPWVPADLESDSNRQSK 60

Query: 189 LLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENP 248
           L++KM IC+KK+ENSQFYQTL+E+++T   L+S ++VLGSE KM MV+YG+GSIE+YE P
Sbjct: 61  LIEKMNICMKKVENSQFYQTLLEQIQTPESLDSFHKVLGSELKMQMVIYGIGSIESYETP 120

Query: 249 RLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFF 308
           R+QLS+AIL+K++FSWI  +EVFDP+LSATE R++E+ GCSVLS NE GRRC  +PT+F+
Sbjct: 121 RIQLSVAILMKKEFSWIGDIEVFDPVLSATESRVLEALGCSVLSVNEHGRRCVTRPTLFY 180

Query: 309 MPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKF 368
           MPHCEAELYNNLLQ NW+V LLN I LFGNSFE+Y Q++SEF+NS +VDSS+ I+A R+F
Sbjct: 181 MPHCEAELYNNLLQANWRVELLNRIALFGNSFEVY-QYLSEFRNSTIVDSSRHIVAVREF 240

Query: 369 IREIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQ 402
             E  IKTVSDDYF AFHDSSW FFSP    ELQ
Sbjct: 241 THEYVIKTVSDDYFAAFHDSSWHFFSPDPKTELQ 272

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BLAST of Csa5G457240 vs. TrEMBL
Match: W9R0F4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023959 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 8.4e-95
Identity = 176/278 (63.31%), Postives = 224/278 (80.58%), Query Frame = 1


Query: 129 MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQR--TWSPTDQANDTIRES 188
           MAASAKT++    S +G+WTVVLPRRG+ K+T P  R RE Q+  +W+PTD   +++RES
Sbjct: 1   MAASAKTLTAKTSSMNGEWTVVLPRRGR-KRTCPITRTREQQQPVSWAPTDFEVNSLRES 60

Query: 189 KLLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYEN 248
           KL QKM+IC+KKLE SQF+ TL++++ +   ++  ++VLGSE KM MV+YG+GSIE+YEN
Sbjct: 61  KLKQKMQICMKKLETSQFFLTLLDQIRSPEIIQCFHKVLGSELKMQMVIYGIGSIESYEN 120

Query: 249 PRLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMF 308
           PRLQLSLA+LLK KF WI  +EVFDPILSATE R++E  GCSVLS NEQGRR  +KPTM 
Sbjct: 121 PRLQLSLALLLKSKFGWIGDIEVFDPILSATESRVLEFLGCSVLSINEQGRRKVQKPTML 180

Query: 309 FMPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRK 368
           FMPHCEAELY+NLLQENW++  LN++V+FGNSFE YEQFVSEFKNS V  S++ +L+++K
Sbjct: 181 FMPHCEAELYDNLLQENWRIEHLNNLVIFGNSFENYEQFVSEFKNSTVA-SARHMLSAQK 240

Query: 369 FIREIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFID 405
           F  E KI+TV DDYFGAFHDSSW FFSPV    LQ+++
Sbjct: 241 FTEEFKIQTVLDDYFGAFHDSSWHFFSPVIEPGLQYVN 276

[Close]

BLAST of Csa5G457240 vs. TrEMBL
Match: M5VQP0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009752mg PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.2e-93
Identity = 175/275 (63.64%), Postives = 215/275 (78.18%), Query Frame = 1


Query: 129 MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRT--WSPTDQANDTIRES 188
           MAASAKT++    + +GDWTVV  RRG+Q++  PK+ IR  ++   W+PTD   +  RES
Sbjct: 1   MAASAKTLTAESHTLNGDWTVVSSRRGRQRRNPPKITIRVQKQPSHWAPTDLEINFARES 60

Query: 189 KLLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYEN 248
           KL+QKM+IC+KKLE SQF+  L++E++T   +   +RVL SE KM MV+YG+GSIE+YE+
Sbjct: 61  KLMQKMQICMKKLEMSQFFLNLLDEIQTPEMMNYFHRVLSSELKMKMVIYGIGSIESYES 120

Query: 249 PRLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMF 308
           PRLQLSLAILLKRKF+WI  +EVFDPILSATE R++E+  C VLS NEQGRR AEKPTMF
Sbjct: 121 PRLQLSLAILLKRKFNWIGDIEVFDPILSATESRVLEALECCVLSINEQGRRQAEKPTMF 180

Query: 309 FMPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRK 368
           FMPHCEAELY+NLLQ NW+  LLN  VLFGNSFE YEQ +SE+KNS +VDS++ ILA RK
Sbjct: 181 FMPHCEAELYDNLLQANWEARLLNCTVLFGNSFETYEQHLSEYKNSAIVDSTRHILAVRK 240

Query: 369 FIREIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQ 402
           F  E +IKT+SD YF AFHDSSW FF PV   ELQ
Sbjct: 241 FTDEFRIKTISDTYFSAFHDSSWHFFRPVLETELQ 275

[Close]

BLAST of Csa5G457240 vs. TAIR10
Match: AT5G59560.1 (AT5G59560.1 sensitivity to red light reduced protein (SRR1))

HSP 1 Score: 275.0 bits (702), Expect = 7.3e-74
Identity = 135/261 (51.72%), Postives = 191/261 (73.18%), Query Frame = 1


Query: 137 SIPDQSNSGDWTVVLP---RRGKQKKTFPKLRIREDQRTWSPTDQANDTIRESKLLQKME 196
           ++ + S+ G+W VVLP   R+G+++K  PK +  E+++ W   D   D  R+++L QKME
Sbjct: 4   TVKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKME 63

Query: 197 ICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENPRLQLSL 256
           I +KK+E+S FY   +E+L++      +  VLGSE+++ MV+YG+GSIE+YE+PR QLS+
Sbjct: 64  ISLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSI 123

Query: 257 AILLKRKFSWI-ESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFFMPHCE 316
           AIL+KR+F W+ +++EVFDP+LSATE   +ES GCSVLS NEQ RR A KPT+FFMPHCE
Sbjct: 124 AILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCE 183

Query: 317 AELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKFIREIK 376
           A LY+NLLQ NW++  L+ I LFGNSF++YE+ VS   ++ V+ ++K I+A+++   E  
Sbjct: 184 ANLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVS--FDAEVICATKRIIAAQRVTSEFA 243

Query: 377 IKTVSDDYFGAFHDSSWQFFS 394
           I+T SDDYF AFHDSSW FFS
Sbjct: 244 IETESDDYFAAFHDSSWHFFS 262

[Close]

BLAST of Csa5G457240 vs. NCBI nr
Match: gi|700195945|gb|KGN51122.1| (hypothetical protein Csa_5G457240 [Cucumis sativus])

HSP 1 Score: 805.4 bits (2079), Expect = 4.4e-230
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 1


Query: 1   MENVIAIVDHGSHLAEGAAQALSPEPRSARHLSSSCEPIPFAREPIPRGSAYGSQLGVKG 60
           MENVIAIVDHGSHLAEGAAQALSPEPRSARHLSSSCEPIPFAREPIPRGSAYGSQLGVKG
Sbjct: 1   MENVIAIVDHGSHLAEGAAQALSPEPRSARHLSSSCEPIPFAREPIPRGSAYGSQLGVKG 60

Query: 61  AAQAPFARATISTPLELKLGSAYGSQLGVKGAAQAPFARATSSTPLELKPEQSKTNQVRN 120
           AAQAPFARATISTPLELKLGSAYGSQLGVKGAAQAPFARATSSTPLELKPEQSKTNQVRN
Sbjct: 61  AAQAPFARATISTPLELKLGSAYGSQLGVKGAAQAPFARATSSTPLELKPEQSKTNQVRN 120

Query: 121 EKLYRLDGMAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQAN 180
           EKLYRLDGMAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQAN
Sbjct: 121 EKLYRLDGMAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQAN 180

Query: 181 DTIRESKLLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGS 240
           DTIRESKLLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGS
Sbjct: 181 DTIRESKLLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGS 240

Query: 241 IENYENPRLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCA 300
           IENYENPRLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCA
Sbjct: 241 IENYENPRLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCA 300

Query: 301 EKPTMFFMPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKF 360
           EKPTMFFMPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKF
Sbjct: 301 EKPTMFFMPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKF 360

Query: 361 ILASRKFIREIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL 406
           ILASRKFIREIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL
Sbjct: 361 ILASRKFIREIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL 405

[Close]

BLAST of Csa5G457240 vs. NCBI nr
Match: gi|449452014|ref|XP_004143755.1| (PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis sativus])

HSP 1 Score: 557.0 bits (1434), Expect = 2.7e-155
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1


Query: 129 MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQANDTIRESKL 188
           MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQANDTIRESKL
Sbjct: 1   MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQANDTIRESKL 60

Query: 189 LQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENPR 248
           LQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENPR
Sbjct: 61  LQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENPR 120

Query: 249 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFFM 308
           LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFFM 180

Query: 309 PHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKFI 368
           PHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKFI
Sbjct: 181 PHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKFI 240

Query: 369 REIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL 406
           REIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL
Sbjct: 241 REIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL 277

[Close]

BLAST of Csa5G457240 vs. NCBI nr
Match: gi|659072440|ref|XP_008465606.1| (PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis melo])

HSP 1 Score: 525.4 bits (1352), Expect = 8.8e-146
Identity = 258/277 (93.14%), Postives = 270/277 (97.47%), Query Frame = 1


Query: 129 MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQANDTIRESKL 188
           MAASAKTV+IPDQSN+GDWTVVLPRRGKQ+K FPKLR REDQRTWSPTDQANDTIRESKL
Sbjct: 1   MAASAKTVAIPDQSNNGDWTVVLPRRGKQRKNFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 189 LQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENPR 248
           LQKME+CIKKLE+SQFY+TLVEELET+PFLESLNRVL SESKMG+V+YGVGSIENYENPR
Sbjct: 61  LQKMEMCIKKLESSQFYRTLVEELETVPFLESLNRVLDSESKMGVVIYGVGSIENYENPR 120

Query: 249 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFFM 308
           LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLS NEQGRRCAEKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSVNEQGRRCAEKPTMFFM 180

Query: 309 PHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKFI 368
           PHCEAELYNNLLQENWKV LLNHI+LFGNSFEIYEQFVSEFKNSPVVDSS FILASRKF+
Sbjct: 181 PHCEAELYNNLLQENWKVKLLNHIMLFGNSFEIYEQFVSEFKNSPVVDSSNFILASRKFV 240

Query: 369 REIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL 406
           REIKIKTVSDDYFGAFHDSSW FFSPVSPLEL+FIDL
Sbjct: 241 REIKIKTVSDDYFGAFHDSSWHFFSPVSPLELKFIDL 277

[Close]

BLAST of Csa5G457240 vs. NCBI nr
Match: gi|225435979|ref|XP_002271597.1| (PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Vitis vinifera])

HSP 1 Score: 359.4 bits (921), Expect = 8.4e-96
Identity = 180/269 (66.91%), Postives = 216/269 (80.30%), Query Frame = 1


Query: 129 MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIRED-QRTWSPTDQANDTIRESK 188
           MAASAKT+++       DWTVVLPRRGK+++ F K +  E  Q+ W+PTD   D  RESK
Sbjct: 1   MAASAKTITLESSDAISDWTVVLPRRGKRRRNFLKSKHPEQHQQPWAPTDLEMDLHRESK 60

Query: 189 LLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENP 248
           L+QK++ICI+KL NS FY  L+++++T   LE+  RVLGSE KM MVVYG+GSIE+YE P
Sbjct: 61  LMQKIQICIRKLGNSTFYHVLLDQVQTPHMLEAFLRVLGSELKMQMVVYGIGSIESYEPP 120

Query: 249 RLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFF 308
           RLQLSLAILLKRKFSWI  ++VFDPILSATE R++E+ GCSVLS NEQGRR A KPT+FF
Sbjct: 121 RLQLSLAILLKRKFSWIGDIKVFDPILSATESRVLEALGCSVLSVNEQGRRQASKPTLFF 180

Query: 309 MPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKF 368
           MPHCEAELY+NLLQENW+   +N+IVLFGNSF  YEQ VSEF++S +VDSS+ ILA RKF
Sbjct: 181 MPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVDSSRHILAVRKF 240

Query: 369 IREIKIKTVSDDYFGAFHDSSWQFFSPVS 397
            RE  IKTVSDDYFGAFHDSSW FFS V+
Sbjct: 241 TREFAIKTVSDDYFGAFHDSSWHFFSLVA 269

[Close]

BLAST of Csa5G457240 vs. NCBI nr
Match: gi|1009175277|ref|XP_015868794.1| (PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Ziziphus jujuba])

HSP 1 Score: 356.7 bits (914), Expect = 5.4e-95
Identity = 172/274 (62.77%), Postives = 220/274 (80.29%), Query Frame = 1


Query: 129 MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTF-----PKLRIREDQRT--WSPTDQAND 188
           MAASAKT+++ + S +G+W +VLPRR +++KT      P+   ++ Q++  W+P+D  +D
Sbjct: 1   MAASAKTLTVENPSLNGEWKIVLPRRARRRKTSLGAKSPQQPQQQQQQSSSWAPSDFESD 60

Query: 189 TIRESKLLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSI 248
            IRESKLLQKM+IC+KKLE SQF+ TL+++++T    +  +R+LGSESKM MV+YG+GSI
Sbjct: 61  IIRESKLLQKMQICMKKLEVSQFFLTLLDQIQTPEISDCFHRILGSESKMKMVIYGIGSI 120

Query: 249 ENYENPRLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAE 308
           E+YE+PRLQLSLAILL++KF+WI  +EVFDP+LSATE R++E+ GCSVLS NEQGRR A+
Sbjct: 121 ESYESPRLQLSLAILLRKKFNWIGEIEVFDPVLSATEARVLEALGCSVLSINEQGRRLAQ 180

Query: 309 KPTMFFMPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFI 368
            PT+FFMPHCEAELYNNLLQ NW+VG LNHI LFGNSFE YEQ  S FKNS V +S+K I
Sbjct: 181 NPTLFFMPHCEAELYNNLLQSNWEVGFLNHIALFGNSFETYEQHFSVFKNSKVAESAKHI 240

Query: 369 LASRKFIREIKIKTVSDDYFGAFHDSSWQFFSPV 396
           L  RKF  E +I+TVSDDYF AFHDSSW FF PV
Sbjct: 241 LGVRKFTEEFRIQTVSDDYFAAFHDSSWHFFRPV 274

The following BLAST results are available for this feature:

BLAST of Csa5G457240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SRR1_ARATH	1.3e-72	51.72	Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana GN=SRR1 PE=2 ...	[more]
SRR1L_MOUSE	1.8e-18	33.49	SRR1-like protein OS=Mus musculus GN=Srrd PE=2 SV=4	[more]
SRR1L_HUMAN	2.7e-17	36.16	SRR1-like protein OS=Homo sapiens GN=SRRD PE=2 SV=1	[more]

BLAST of Csa5G457240 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRU2_CUCSA	3.1e-230	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G457240 PE=4 SV=1	[more]
A5B9I4_VITVI	4.9e-95	66.54	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012927 PE=4 SV=1	[more]
B9S4K4_RICCO	6.5e-95	62.41	Protein SENSITIVITY TO RED LIGHT REDUCED, putative OS=Ricinus communis GN=RCOM_0...	[more]
W9R0F4_9ROSA	8.4e-95	63.31	Uncharacterized protein OS=Morus notabilis GN=L484_023959 PE=4 SV=1	[more]
M5VQP0_PRUPE	1.2e-93	63.64	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009752mg PE=4 SV=1	[more]

BLAST of Csa5G457240 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59560.1	7.3e-74	51.72	sensitivity to red light reduced protein (SRR1)	[more]

BLAST of Csa5G457240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700195945\|gb\|KGN51122.1\|	4.4e-230	100.00	hypothetical protein Csa_5G457240 [Cucumis sativus]	[more]
gi\|449452014\|ref\|XP_004143755.1\|	2.7e-155	100.00	PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis sativus]	[more]
gi\|659072440\|ref\|XP_008465606.1\|	8.8e-146	93.14	PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis melo]	[more]
gi\|225435979\|ref\|XP_002271597.1\|	8.4e-96	66.91	PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Vitis vinifera]	[more]
gi\|1009175277\|ref\|XP_015868794.1\|	5.4e-95	62.77	PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012942	SRR1-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007623	circadian rhythm
biological_process	GO:0010017	red or far-red light signaling pathway
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0008150	biological_process
cellular_component	GO:0044424	intracellular part
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU127982	cucumber EST collection version 3.0	transcribed_cluster
CU139584	cucumber EST collection version 3.0	transcribed_cluster
CU154830	cucumber EST collection version 3.0	transcribed_cluster
CU158560	cucumber EST collection version 3.0	transcribed_cluster
CU160742	cucumber EST collection version 3.0	transcribed_cluster
CU163826	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G457240.1	Csa5G457240.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU160742	CU160742	transcribed_cluster
CU127982	CU127982	transcribed_cluster
CU139584	CU139584	transcribed_cluster
CU154830	CU154830	transcribed_cluster
CU163826	CU163826	transcribed_cluster
CU158560	CU158560	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012942	Sensitivity To Red Light Reduced-like, SRR1	PFAM	PF07985	SRR1	coord: 233..285 score: 2.0
None	No IPR available	PANTHER	PTHR28626	FAMILY NOT NAMED	coord: 137..394 score: 2.0
None	No IPR available	PANTHER	PTHR28626:SF3	SRR1-LIKE PROTEIN	coord: 137..394 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G457240	Cla005918	Watermelon (97103) v1	cuwmB410
Csa5G457240	MELO3C005120	Melon (DHL92) v3.5.1	cumeB363
Csa5G457240	ClCG01G007760	Watermelon (Charleston Gray)	cuwcgB366
Csa5G457240	Lsi09G008180	Bottle gourd (USVL1VR-Ls)	culsiB324
Csa5G457240	MELO3C005120.2	Melon (DHL92) v3.6.1	cumedB341
Csa5G457240	Bhi12G000957	Wax gourd	cuwgoB454
Csa5G457240	CSPI05G15800	Wild cucumber (PI 183967)	cpicuB239
Csa5G457240	Cucsa.317650	Cucumber (Gy14) v1	cgycuB455
Csa5G457240	CmaCh04G022150	Cucurbita maxima (Rimu)	cmacuB728
Csa5G457240	CmaCh15G008190	Cucurbita maxima (Rimu)	cmacuB303
Csa5G457240	CmoCh04G023160	Cucurbita moschata (Rifu)	cmocuB720
Csa5G457240	CmoCh15G008450	Cucurbita moschata (Rifu)	cmocuB291
Csa5G457240	Cp4.1LG13g05890	Cucurbita pepo (Zucchini)	cpecuB179
Csa5G457240	Cp4.1LG01g19230	Cucurbita pepo (Zucchini)	cpecuB421
Csa5G457240	CsGy5G015530	Cucumber (Gy14) v2	cgybcuB223
Csa5G457240	Carg17748	Silver-seed gourd	carcuB0510
Csa5G457240	Carg01388	Silver-seed gourd	carcuB0843

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G457240	Watermelon (97103) v2	cuwmbB338