Carg17748 (gene) Silver-seed gourd

Overview
NameCarg17748
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionSensitivity To Red Light Reduced-like, SRR1
LocationCucurbita_argyrosperma_scaffold_082 : 344313 .. 345146 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCGTCGGCAAAAACTCTTGCTATTCCGGATCAGTCGAATAATGGCGACTGGACGGTTGTTTTACCTCGTCGTGGCAGGCAGAGGAAGAATTTGCCGAAGCTAAGAAAACAAGAAGATCAGCGGACTTGGTCTCCGTCTGATCAGGCCAATGATACAATCAGGGAATCGAAACTGTTGCATAAGATGGAAATCTGTATTAAGAAAGTTGAGATCTCCCAATTTTATCGAACTCTTGTTGGTGAGCTTGAAACGATGCCAGTCTTGGAATCCTTGAATAGGGTTTTGGCCTCGGAGTCGAAGATGGGGATGGTTTTCTATGGCGTAGGAAGCATTGAAAATTATGAAAATCCTCGATTGCAGCTCAGTCTTGCTATATTGTTGAAGAGAAAATTTAGTTGGATTGGAAGTTTAGAAGTGTTCGATCCAATTCTTTCCGCAATCGAATGTCGGGTTATCGAATCCTTTGGTTGTTCTGTTCTATCAGTAAATGAGCAAGGACGGCGATGTGCGCAGAAGCCAACAATGTTCTTCATGCCCCATTGCGAGGCAGAGCTGTACAACAATCTTTTACAGGAGAATTGGACGGTGGAGCTGTTGAATCATGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGAGCAGTTTGTGTCTGAATTCAAGAACTCACCCGTTGTTGATTCGGCAAAGTACATCTTGGCCTCTAGAAAATTCTCACGCGAGATCAAAATCAAGACACTTTCAGATGAATATTTTGGTGCTTTCCATGATTCAAGTTGGCATTTTTTCAGCCCTTTTTTACCGACAGAGCTGCAGTTCACAGATCTTTGA

mRNA sequence

ATGGCAGCGTCGGCAAAAACTCTTGCTATTCCGGATCAGTCGAATAATGGCGACTGGACGGTTGTTTTACCTCGTCGTGGCAGGCAGAGGAAGAATTTGCCGAAGCTAAGAAAACAAGAAGATCAGCGGACTTGGTCTCCGTCTGATCAGGCCAATGATACAATCAGGGAATCGAAACTGTTGCATAAGATGGAAATCTGTATTAAGAAAGTTGAGATCTCCCAATTTTATCGAACTCTTGTTGGTGAGCTTGAAACGATGCCAGTCTTGGAATCCTTGAATAGGGTTTTGGCCTCGGAGTCGAAGATGGGGATGGTTTTCTATGGCGTAGGAAGCATTGAAAATTATGAAAATCCTCGATTGCAGCTCAGTCTTGCTATATTGTTGAAGAGAAAATTTAGTTGGATTGGAAGTTTAGAAGTGTTCGATCCAATTCTTTCCGCAATCGAATGTCGGGTTATCGAATCCTTTGGTTGTTCTGTTCTATCAGTAAATGAGCAAGGACGGCGATGTGCGCAGAAGCCAACAATGTTCTTCATGCCCCATTGCGAGGCAGAGCTGTACAACAATCTTTTACAGGAGAATTGGACGGTGGAGCTGTTGAATCATGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGAGCAGTTTGTGTCTGAATTCAAGAACTCACCCGTTGTTGATTCGGCAAAGTACATCTTGGCCTCTAGAAAATTCTCACGCGAGATCAAAATCAAGACACTTTCAGATGAATATTTTGGTGCTTTCCATGATTCAAGTTGGCATTTTTTCAGCCCTTTTTTACCGACAGAGCTGCAGTTCACAGATCTTTGA

Coding sequence (CDS)

ATGGCAGCGTCGGCAAAAACTCTTGCTATTCCGGATCAGTCGAATAATGGCGACTGGACGGTTGTTTTACCTCGTCGTGGCAGGCAGAGGAAGAATTTGCCGAAGCTAAGAAAACAAGAAGATCAGCGGACTTGGTCTCCGTCTGATCAGGCCAATGATACAATCAGGGAATCGAAACTGTTGCATAAGATGGAAATCTGTATTAAGAAAGTTGAGATCTCCCAATTTTATCGAACTCTTGTTGGTGAGCTTGAAACGATGCCAGTCTTGGAATCCTTGAATAGGGTTTTGGCCTCGGAGTCGAAGATGGGGATGGTTTTCTATGGCGTAGGAAGCATTGAAAATTATGAAAATCCTCGATTGCAGCTCAGTCTTGCTATATTGTTGAAGAGAAAATTTAGTTGGATTGGAAGTTTAGAAGTGTTCGATCCAATTCTTTCCGCAATCGAATGTCGGGTTATCGAATCCTTTGGTTGTTCTGTTCTATCAGTAAATGAGCAAGGACGGCGATGTGCGCAGAAGCCAACAATGTTCTTCATGCCCCATTGCGAGGCAGAGCTGTACAACAATCTTTTACAGGAGAATTGGACGGTGGAGCTGTTGAATCATGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGAGCAGTTTGTGTCTGAATTCAAGAACTCACCCGTTGTTGATTCGGCAAAGTACATCTTGGCCTCTAGAAAATTCTCACGCGAGATCAAAATCAAGACACTTTCAGATGAATATTTTGGTGCTTTCCATGATTCAAGTTGGCATTTTTTCAGCCCTTTTTTACCGACAGAGCTGCAGTTCACAGATCTTTGA

Protein sequence

MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKLLHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPRLQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFSREIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL
Homology
[Close]
BLAST of Carg17748 vs. NCBI nr
Match: XP_023553043.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023553053.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 536.2 bits (1380), Expect = 6.6e-149
Identity = 267/277 (96.39%), Postives = 269/277 (97.11%), Query Frame = 0 

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           M ASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL
Sbjct: 1   MTASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60

Query: 61  LHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
           LHKMEICI+KVE SQFYRTLV ELETMPVLESLNRVLASESKMGMV YGVGSIENYENPR
Sbjct: 61  LHKMEICIEKVESSQFYRTLVDELETMPVLESLNRVLASESKMGMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIG LEVFDPILSAIECRVIESFGCS+LSVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIGRLEVFDPILSAIECRVIESFGCSILSVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELYNNLLQENWT ELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS
Sbjct: 181 PHCEAELYNNLLQENWTGELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 278
           REIKIKTLSDEYFGAFHDSSWHFFS  LPTELQFTDL
Sbjct: 241 REIKIKTLSDEYFGAFHDSSWHFFSTVLPTELQFTDL 277

[Close]
BLAST of Carg17748 vs. NCBI nr
Match: XP_022964146.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita moschata] >XP_022964155.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita moschata] >XP_022964166.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita moschata])

HSP 1 Score: 529.3 bits (1362), Expect = 8.1e-147
Identity = 267/277 (96.39%), Postives = 269/277 (97.11%), Query Frame = 0 

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL
Sbjct: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60

Query: 61  LHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
           LHKMEICIKKVE SQFYRTLV ELE MPVLESLNRVLASESKMGMVFYGVGSIENYENPR
Sbjct: 61  LHKMEICIKKVESSQFYRTLVDELEMMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIG LEVFDPILSAIEC+VIESFGCSVLSVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIGRLEVFDPILSAIECQVIESFGCSVLSVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELY+NLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS
Sbjct: 181 PHCEAELYSNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 278
           REIKIKTLSDEYFGA   SSWH FSPFLPTELQFTDL
Sbjct: 241 REIKIKTLSDEYFGA---SSWHVFSPFLPTELQFTDL 274

[Close]
BLAST of Carg17748 vs. NCBI nr
Match: XP_023550156.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023550157.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023550158.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023550159.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 508.8 bits (1309), Expect = 1.1e-140
Identity = 251/277 (90.61%), Postives = 262/277 (94.58%), Query Frame = 0 

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKTLA+PDQSNNGDWTVVLPRRGRQRK  PKLR +EDQRTWSP+DQANDTIRESKL
Sbjct: 1   MAASAKTLAVPDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
           L KMEICIKKVE SQF+RTL+ EL T PVLESLNR LASESKM MV YGVGSIENYENPR
Sbjct: 61  LQKMEICIKKVESSQFFRTLIDELGTTPVLESLNRALASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSA ECRV+ESFGCSVLSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFK+SPVVDSAKYILASRKF+
Sbjct: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 278
           REIKIKTLSD+YFGAFHDSSWHFFSP  PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

[Close]
BLAST of Carg17748 vs. NCBI nr
Match: XP_022939448.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita moschata] >XP_022939449.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita moschata] >XP_022939450.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita moschata] >XP_022939451.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita moschata] >XP_022939452.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita moschata])

HSP 1 Score: 508.1 bits (1307), Expect = 1.9e-140
Identity = 251/277 (90.61%), Postives = 262/277 (94.58%), Query Frame = 0 

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKTLA+PDQSNNGDWTVVLPRRGRQRK  PKLR +EDQRTWSP+DQAND IRESKL
Sbjct: 1   MAASAKTLAVPDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDAIRESKL 60

Query: 61  LHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
           L KMEICIKKVE SQFYRTL+ EL T PVLESLNRVLASESKM MV YGVGSIENYENPR
Sbjct: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNRVLASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSA ECRV+ESFGCSVLSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELY+NLLQENWTVELLNHVVLFGNSFEIYEQFVSEFK+SPVVDSAKYILASRKF+
Sbjct: 181 PHCEAELYDNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 278
           REIKIKTLSD+YFGAFHDSSWHFFSP  PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

[Close]
BLAST of Carg17748 vs. NCBI nr
Match: XP_022992727.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita maxima] >XP_022992728.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita maxima] >XP_022992730.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita maxima] >XP_022992731.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita maxima] >XP_022992732.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita maxima] >XP_022992733.1 protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita maxima])

HSP 1 Score: 497.7 bits (1280), Expect = 2.6e-137
Identity = 246/277 (88.81%), Postives = 258/277 (93.14%), Query Frame = 0 

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAK LA+ DQSNNGDWTVVLPRRGRQRK  PKLR +EDQRTWSP+DQANDTIRESKL
Sbjct: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
           L KMEICIKKVE SQFYRTL+ EL T PVLESLN+ LASESKM MV YGVGSIENYENPR
Sbjct: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSA ECRV+ESFGCS+LSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEA LYNNLLQENWTVELLNHVVLFGNSFEIY QFVSEFK+SPVVDSAKYILASRKF+
Sbjct: 181 PHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 278
           REIKIKTLSD+YFGAFHDSSWHFFSP  PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

[Close]
BLAST of Carg17748 vs. TAIR10
Match: AT5G59560.1 (sensitivity to red light reduced protein (SRR1))

HSP 1 Score: 257.3 bits (656), Expect = 1.1e-68
Identity = 131/267 (49.06%), Postives = 184/267 (68.91%), Query Frame = 0 

Query: 10  IPDQSNNGDWTVVLPRRGRQRK---NLPKLRKQEDQRTWSPSDQANDTIRESKLLHKMEI 69
           + + S++G+W VVLP +GRQ +                    D   D  R+++L  KMEI
Sbjct: 5   VKNSSSDGEWKVVLPSKGRQGRXXXXXXXXXXXXXXXXXKSDDLEIDPQRQARLKQKMEI 64

Query: 70  CIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPRLQLSLA 129
            +KK+E S FY   + +L++  V   +  VL SE+++ MV YG+GSIE+YE+PR QLS+A
Sbjct: 65  SLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIA 124

Query: 130 ILLKRKFSWIG-SLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEA 189
           IL+KR+F W+G ++EVFDP+LSA E   +ES GCSVLSVNEQ RR A KPT+FFMPHCEA
Sbjct: 125 ILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEA 184

Query: 190 ELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFSREIKI 249
            LY+NLLQ NW ++ L+ + LFGNSF++YE+ VS   ++ V+ + K I+A+++ + E  I
Sbjct: 185 NLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVS--FDAEVICATKRIIAAQRVTSEFAI 244

Query: 250 KTLSDEYFGAFHDSSWHFFSPFLPTEL 273
           +T SD+YF AFHDSSWHFFS  + +EL
Sbjct: 245 ETESDDYFAAFHDSSWHFFSSGIDSEL 269

[Close]
BLAST of Carg17748 vs. Swiss-Prot
Match: sp|Q8GWZ6|SRR1_ARATH (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana OX=3702 GN=SRR1 PE=2 SV=2)

HSP 1 Score: 257.3 bits (656), Expect = 1.9e-67
Identity = 131/267 (49.06%), Postives = 184/267 (68.91%), Query Frame = 0 

Query: 10  IPDQSNNGDWTVVLPRRGRQRK---NLPKLRKQEDQRTWSPSDQANDTIRESKLLHKMEI 69
           + + S++G+W VVLP +GRQ +                    D   D  R+++L  KMEI
Sbjct: 5   VKNSSSDGEWKVVLPSKGRQGRXXXXXXXXXXXXXXXXXKSDDLEIDPQRQARLKQKMEI 64

Query: 70  CIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPRLQLSLA 129
            +KK+E S FY   + +L++  V   +  VL SE+++ MV YG+GSIE+YE+PR QLS+A
Sbjct: 65  SLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIA 124

Query: 130 ILLKRKFSWIG-SLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEA 189
           IL+KR+F W+G ++EVFDP+LSA E   +ES GCSVLSVNEQ RR A KPT+FFMPHCEA
Sbjct: 125 ILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEA 184

Query: 190 ELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFSREIKI 249
            LY+NLLQ NW ++ L+ + LFGNSF++YE+ VS   ++ V+ + K I+A+++ + E  I
Sbjct: 185 NLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVS--FDAEVICATKRIIAAQRVTSEFAI 244

Query: 250 KTLSDEYFGAFHDSSWHFFSPFLPTEL 273
           +T SD+YF AFHDSSWHFFS  + +EL
Sbjct: 245 ETESDDYFAAFHDSSWHFFSSGIDSEL 269

[Close]
BLAST of Carg17748 vs. Swiss-Prot
Match: sp|Q8K2M3|SRR1L_MOUSE (SRR1-like protein OS=Mus musculus OX=10090 GN=Srrd PE=2 SV=4)

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-19
Identity = 73/216 (33.80%), Postives = 111/216 (51.39%), Query Frame = 0 

Query: 19  WTVVLPRRGRQRKNLPKLRKQEDQRTWSPSD---------QANDTIRE----SKLLHKME 78
           W+ V PRR R+R    + R  E  R    +D         +A + +R     S  L  + 
Sbjct: 9   WSAVAPRR-RKRAAGRRPRPGEGPRAEPEADGEAVLRRLREAEEDLRISDFCSSALETIT 68

Query: 79  ICIKK-VEISQFYRTLVGELETMPVLESLNR--VLASESKMGMVFYGVGSIENYENPRLQ 138
            C++K +E  Q     +G L     L S ++  + +S S +  V YG+G+  +    R+Q
Sbjct: 69  ECLRKQLEQLQPLTEALGRLHLGSSLPSASQEPLASSASHVKCVCYGLGTFASCPTARIQ 128

Query: 139 LSLAILLKRKFSWIGS-LEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQ-KPTMFFM 198
           L+  +L   K     S   V+DP+ S  E  V+ S G +VLS NE+G+R  Q +PT+F+M
Sbjct: 129 LAFMLLFLEKCQVPRSHCWVYDPLFSQTEVSVLTSLGVTVLSENEEGKRSVQGQPTVFYM 188

Query: 199 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQ 217
           PHC   LYNNLL  NW+ + L+ V++ GNSF   E+
Sbjct: 189 PHCGTALYNNLLWSNWSADALSRVLIIGNSFRGLEE 223

[Close]
BLAST of Carg17748 vs. Swiss-Prot
Match: sp|Q9UH36|SRR1L_HUMAN (SRR1-like protein OS=Homo sapiens OX=9606 GN=SRRD PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.9e-18
Identity = 61/164 (37.20%), Postives = 93/164 (56.71%), Query Frame = 0 

Query: 106 VFYGVGSIENYENPRLQLSLAILLKRKFSWIGS-LEVFDPILSAIECRVIESFGCSVLSV 165
           V YG+G+       R QL+  +LL  K     S   V+DP+ S +E  V+ + G +VLS 
Sbjct: 142 VCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYDPLFSQLEIEVLNTLGVTVLSE 201

Query: 166 NEQGRRCAQ-KPTMFFMPHCEAELYNNLLQENWTVELLNHVVLFGNSFE-IYEQFVSEF- 225
           NE+G+R  + +PT+F+M HC   LYNNLL  NW+V+ L+ +V+ GNSF+ + E+ ++   
Sbjct: 202 NEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALSKMVIIGNSFKGLEERLLARIL 261

Query: 226 -KNSPVVDSAKYILASRKFSREIKIKTLSDEYFGAFHDSSWHFF 265
            KN P      YI    K   E++    S +Y   F+D+S H+F
Sbjct: 262 QKNYP------YIAKILKGLEELEFPQTS-QYMDIFNDTSVHWF 298

[Close]
BLAST of Carg17748 vs. Swiss-Prot
Match: sp|Q9VEB5|SRR1L_DROME (SRR1-like protein OS=Drosophila melanogaster OX=7227 GN=CG7988 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 58/204 (28.43%), Postives = 89/204 (43.63%), Query Frame = 0 

Query: 14  SNNG-DWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQAND--TIRESKLLHKME-ICIK 73
           SN+G D+ VV  ++   RK L     +   R  S SD   D   +   K   ++E +C +
Sbjct: 2   SNSGEDFQVVTRKKWMARKCL-----RRRDRHKSESDYLIDCPDVNVEKFQPRLENLCTE 61

Query: 74  KVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPRLQLSLAILL 133
             +   F   LV        LE + + L       +V  G+G      +   Q +  I L
Sbjct: 62  MCQSDYF---LVAMEALQQQLEGIRKPLER-----IVCLGLGPFSRTYHALHQAAFVIGL 121

Query: 134 KRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEAELYN 193
            R    I     FDP+    E  +I  F   ++S +  G+  A  PT++++PHC   L +
Sbjct: 122 HRHHK-IREALYFDPVFRDSEKELIRLFDGCIMSKDCAGKHEATVPTLYYLPHCPYALMH 181

Query: 194 NLLQENWTVELLNHVVLFGNSFEI 214
           N+L  NW  E L +V L  NSFE+
Sbjct: 182 NILWSNWKRETLPNVFLISNSFEM 191

[Close]
BLAST of Carg17748 vs. TrEMBL
Match: tr|A0A1S3CQQ4|A0A1S3CQQ4_CUCME (protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo OX=3656 GN=LOC103503243 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 1.9e-136
Identity = 241/277 (87.00%), Postives = 260/277 (93.86%), Query Frame = 0 

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKT+AIPDQSNNGDWTVVLPRRG+QRKN PKLR +EDQRTWSP+DQANDTIRESKL
Sbjct: 1   MAASAKTVAIPDQSNNGDWTVVLPRRGKQRKNFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
           L KME+CIKK+E SQFYRTLV ELET+P LESLNRVL SESKMG+V YGVGSIENYENPR
Sbjct: 61  LQKMEMCIKKLESSQFYRTLVEELETVPFLESLNRVLDSESKMGVVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWI SLEVFDPILSA ECR++ESFGCSVLSVNEQGRRCA+KPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSVNEQGRRCAEKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELYNNLLQENW V+LLNH++LFGNSFEIYEQFVSEFKNSPVVDS+ +ILASRKF 
Sbjct: 181 PHCEAELYNNLLQENWKVKLLNHIMLFGNSFEIYEQFVSEFKNSPVVDSSNFILASRKFV 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 278
           REIKIKT+SD+YFGAFHDSSWHFFSP  P EL+F DL
Sbjct: 241 REIKIKTVSDDYFGAFHDSSWHFFSPVSPLELKFIDL 277

[Close]
BLAST of Carg17748 vs. TrEMBL
Match: tr|A0A0A0KRU2|A0A0A0KRU2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G457240 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 1.8e-134
Identity = 240/277 (86.64%), Postives = 257/277 (92.78%), Query Frame = 0 

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKT++IPDQSN+GDWTVVLPRRG+Q+K  PKLR +EDQRTWSP+DQANDTIRESKL
Sbjct: 129 MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQANDTIRESKL 188

Query: 61  LHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
           L KMEICIKK+E SQFY+TLV ELETMP LESLNRVL SESKMGMV YGVGSIENYENPR
Sbjct: 189 LQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENPR 248

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWI SLEVFDPILSA ECR++ESFGCSVLS NEQGRRCA+KPTMFFM
Sbjct: 249 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFFM 308

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELYNNLLQENW V LLNH+VLFGNSFEIYEQFVSEFKNSPVVDS+K+ILASRKF 
Sbjct: 309 PHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKFI 368

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 278
           REIKIKT+SD+YFGAFHDSSW FFSP  P ELQF DL
Sbjct: 369 REIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL 405

[Close]
BLAST of Carg17748 vs. TrEMBL
Match: tr|A0A2I4GZX1|A0A2I4GZX1_9ROSI (protein SENSITIVITY TO RED LIGHT REDUCED 1-like OS=Juglans regia OX=51240 GN=LOC109012327 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 3.0e-105
Identity = 189/273 (69.23%), Postives = 224/273 (82.05%), Query Frame = 0 

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKTL + ++S NGDWTVVLPRRGR +K+LP +R QE Q+ W P+D   D IR SKL
Sbjct: 1   MAASAKTLTVANRSLNGDWTVVLPRRGRHKKHLPTIRSQEQQQPWVPTDVETDPIRTSKL 60

Query: 61  LHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
           + KM+IC+KK+E S FYRTL+ +++T  +L  L+RVL SESKM MV YG+GSIE+YE PR
Sbjct: 61  IQKMQICMKKIESSSFYRTLLDQIQTPEILHCLHRVLGSESKMQMVIYGIGSIESYEPPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLA+L+KRKFSWIG +EVFDPILSA E RV+E+ GCSVLSVNEQG R A KPTMFFM
Sbjct: 121 LQLSLAVLMKRKFSWIGDIEVFDPILSATESRVLEALGCSVLSVNEQGHRRAIKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELY+NLL  NW VELLN VVLFGNSF+ YEQ +SEFKNS +V SAK IL+ R F+
Sbjct: 181 PHCEAELYDNLLHANWGVELLNRVVLFGNSFKTYEQHISEFKNSAIVGSAKRILSIRPFT 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQ 274
           RE +I T+SD+YFGAFHDSSWHFF P L TEL+
Sbjct: 241 REFRINTVSDDYFGAFHDSSWHFFGPVLETELR 273

[Close]
BLAST of Carg17748 vs. TrEMBL
Match: tr|M5VQP0|M5VQP0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G009600 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 8.7e-97
Identity = 180/279 (64.52%), Postives = 219/279 (78.49%), Query Frame = 0 

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPK--LRKQEDQRTWSPSDQANDTIRES 60
           MAASAKTL     + NGDWTVV  RRGRQR+N PK  +R Q+    W+P+D   +  RES
Sbjct: 1   MAASAKTLTAESHTLNGDWTVVSSRRGRQRRNPPKITIRVQKQPSHWAPTDLEINFARES 60

Query: 61  KLLHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYEN 120
           KL+ KM+IC+KK+E+SQF+  L+ E++T  ++   +RVL+SE KM MV YG+GSIE+YE+
Sbjct: 61  KLMQKMQICMKKLEMSQFFLNLLDEIQTPEMMNYFHRVLSSELKMKMVIYGIGSIESYES 120

Query: 121 PRLQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMF 180
           PRLQLSLAILLKRKF+WIG +EVFDPILSA E RV+E+  C VLS+NEQGRR A+KPTMF
Sbjct: 121 PRLQLSLAILLKRKFNWIGDIEVFDPILSATESRVLEALECCVLSINEQGRRQAEKPTMF 180

Query: 181 FMPHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRK 240
           FMPHCEAELY+NLLQ NW   LLN  VLFGNSFE YEQ +SE+KNS +VDS ++ILA RK
Sbjct: 181 FMPHCEAELYDNLLQANWEARLLNCTVLFGNSFETYEQHLSEYKNSAIVDSTRHILAVRK 240

Query: 241 FSREIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 278
           F+ E +IKT+SD YF AFHDSSWHFF P L TELQ + L
Sbjct: 241 FTDEFRIKTISDTYFSAFHDSSWHFFRPVLETELQLSYL 279

[Close]
BLAST of Carg17748 vs. TrEMBL
Match: tr|A0A1Q3CJM4|A0A1Q3CJM4_CEPFO (SRR1 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_23779 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 4.8e-95
Identity = 171/275 (62.18%), Postives = 215/275 (78.18%), Query Frame = 0 

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLR-KQEDQRTWSPSDQANDTIRESK 60
           MAASAKTL + ++   GDWT+VLPRRGR+R N PK+R   + Q+ W P+D   D  R+S+
Sbjct: 1   MAASAKTLTLDNRIQTGDWTIVLPRRGRRRSNFPKVRTPDQQQQPWVPTDILTDPCRQSR 60

Query: 61  LLHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENP 120
           L+ KMEIC+KK+E SQFY+T + +++T  + +   RVL SE KM MV YG+GSIE+YE P
Sbjct: 61  LIQKMEICVKKIETSQFYQTFLAQIQTPEIFDCFCRVLGSEMKMQMVIYGIGSIESYETP 120

Query: 121 RLQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFF 180
           + QL LAILLKRKFSWIG +EVFDPILSA E  V+ESFGCSVLSVNEQGRR  +KPT+F+
Sbjct: 121 QFQLGLAILLKRKFSWIGEIEVFDPILSATESLVLESFGCSVLSVNEQGRRHVKKPTLFY 180

Query: 181 MPHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKF 240
           MPHCEA LY+NLL  NW VE +N +VLFGNSFE+Y Q+ +EFKNS V DSAK++LA  + 
Sbjct: 181 MPHCEAGLYDNLLHANWGVESMNRIVLFGNSFEMYRQY-AEFKNSAVADSAKHVLAVHRI 240

Query: 241 SREIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQF 275
           ++E +I T+SD+YF AFHDSSWHFFSP   +ELQF
Sbjct: 241 TKEFQIMTVSDDYFAAFHDSSWHFFSPDPESELQF 274

The following BLAST results are available for this feature:
BLAST of Carg17748 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023553043.16.6e-14996.39protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022964146.18.1e-14796.39protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita moschata] >XP_0229641... [more]
XP_023550156.11.1e-14090.61protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022939448.11.9e-14090.61protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita moschata] >XP_022939449.1 ... [more]
XP_022992727.12.6e-13788.81protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucurbita maxima] >XP_022992728.1 pr... [more]
BLAST of Carg17748 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59560.11.1e-6849.06sensitivity to red light reduced protein (SRR1)[more]
BLAST of Carg17748 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8GWZ6|SRR1_ARATH1.9e-6749.06Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana OX=3702 GN=SR... [more]
sp|Q8K2M3|SRR1L_MOUSE1.5e-1933.80SRR1-like protein OS=Mus musculus OX=10090 GN=Srrd PE=2 SV=4[more]
sp|Q9UH36|SRR1L_HUMAN2.9e-1837.20SRR1-like protein OS=Homo sapiens OX=9606 GN=SRRD PE=2 SV=1[more]
sp|Q9VEB5|SRR1L_DROME1.3e-0728.43SRR1-like protein OS=Drosophila melanogaster OX=7227 GN=CG7988 PE=1 SV=1[more]
BLAST of Carg17748 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CQQ4|A0A1S3CQQ4_CUCME1.9e-13687.00protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo OX=3656 GN=LOC1035032... [more]
tr|A0A0A0KRU2|A0A0A0KRU2_CUCSA1.8e-13486.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G457240 PE=4 SV=1[more]
tr|A0A2I4GZX1|A0A2I4GZX1_9ROSI3.0e-10569.23protein SENSITIVITY TO RED LIGHT REDUCED 1-like OS=Juglans regia OX=51240 GN=LOC... [more]
tr|M5VQP0|M5VQP0_PRUPE8.7e-9764.52Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G009600 PE=4 SV=1[more]
tr|A0A1Q3CJM4|A0A1Q3CJM4_CEPFO4.8e-9562.18SRR1 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_237... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012942SRR1-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17748-RACarg17748-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012942Sensitivity To Red Light Reduced-like, SRR1PFAMPF07985SRR1coord: 105..157
e-value: 3.2E-10
score: 39.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..50
NoneNo IPR availablePANTHERPTHR28626FAMILY NOT NAMEDcoord: 3..266
NoneNo IPR availablePANTHERPTHR28626:SF3SRR1-LIKE PROTEINcoord: 3..266