CmaCh15G008190 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh15G008190
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionSensitivity to red light reduced protein (SRR1), putative
LocationCma_Chr15 : 4117987 .. 4118820 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCATCGGCAAAAAATCTCGCGGTTCTGGATCAGTCAAATAATGGCGACTGGACAGTTGTTCTACCTCGTCGCGGCAGGCAGAGGAAAACTTTTCCGAAGCTCAGAAATCGAGAAGATCAGCGGACTTGGTCTCCCACTGATCAGGCTAATGATACAATCAGAGAATCGAAACTGTTGCAGAAGATGGAAATCTGTATTAAGAAAGTTGAGAGCTCCCAATTTTATCGAACTCTTATTGACGAGCTTGGAACAACGCCAGTCTTGGAATCCTTAAATAAGGCTTTGGCATCCGAATCAAAGATGGAGATGGTAATCTATGGCGTAGGAAGCATAGAGAATTACGAAAATCCTCGATTGCAGCTCAGTCTTGCAATCTTGTTGAAGAGGAAATTTAGTTGGATTGGAAGTTTGGAGGTGTTCGATCCAATTCTTTCTGCAACCGAATGTCGGGTAATGGAATCCTTTGGTTGTTCAATCCTATCAGTAAACGAGGAAGGACGGCGATGTGCGCAGAAGGCAACATTGTTCTTTATGCCCCATTGCGAGGCAGGGTTGTACAACAATCTTTTACAGGAAAATTGGACGGTGGAGCTGTTGAATCACGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGGACAGTTTGTATCTGAATTCAAAAGCTCACCCGTTGTTGATTCAGCGAAGTATATTTTAGCCTCAAGAAAGTTCACACGCGAGATCAAAATCAAGACACTTTCAGATGATTATTTTGGTGCTTTCCATGATTCGAGTTGGCATTTTTTCAGCCCTGTTTCACCGACGGAGCTGCAATTCACAGATCTTTGA

mRNA sequence

ATGGCAGCATCGGCAAAAAATCTCGCGGTTCTGGATCAGTCAAATAATGGCGACTGGACAGTTGTTCTACCTCGTCGCGGCAGGCAGAGGAAAACTTTTCCGAAGCTCAGAAATCGAGAAGATCAGCGGACTTGGTCTCCCACTGATCAGGCTAATGATACAATCAGAGAATCGAAACTGTTGCAGAAGATGGAAATCTGTATTAAGAAAGTTGAGAGCTCCCAATTTTATCGAACTCTTATTGACGAGCTTGGAACAACGCCAGTCTTGGAATCCTTAAATAAGGCTTTGGCATCCGAATCAAAGATGGAGATGGTAATCTATGGCGTAGGAAGCATAGAGAATTACGAAAATCCTCGATTGCAGCTCAGTCTTGCAATCTTGTTGAAGAGGAAATTTAGTTGGATTGGAAGTTTGGAGGTGTTCGATCCAATTCTTTCTGCAACCGAATGTCGGGTAATGGAATCCTTTGGTTGTTCAATCCTATCAGTAAACGAGGAAGGACGGCGATGTGCGCAGAAGGCAACATTGTTCTTTATGCCCCATTGCGAGGCAGGGTTGTACAACAATCTTTTACAGGAAAATTGGACGGTGGAGCTGTTGAATCACGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGGACAGTTTGTATCTGAATTCAAAAGCTCACCCGTTGTTGATTCAGCGAAGTATATTTTAGCCTCAAGAAAGTTCACACGCGAGATCAAAATCAAGACACTTTCAGATGATTATTTTGGTGCTTTCCATGATTCGAGTTGGCATTTTTTCAGCCCTGTTTCACCGACGGAGCTGCAATTCACAGATCTTTGA

Coding sequence (CDS)

ATGGCAGCATCGGCAAAAAATCTCGCGGTTCTGGATCAGTCAAATAATGGCGACTGGACAGTTGTTCTACCTCGTCGCGGCAGGCAGAGGAAAACTTTTCCGAAGCTCAGAAATCGAGAAGATCAGCGGACTTGGTCTCCCACTGATCAGGCTAATGATACAATCAGAGAATCGAAACTGTTGCAGAAGATGGAAATCTGTATTAAGAAAGTTGAGAGCTCCCAATTTTATCGAACTCTTATTGACGAGCTTGGAACAACGCCAGTCTTGGAATCCTTAAATAAGGCTTTGGCATCCGAATCAAAGATGGAGATGGTAATCTATGGCGTAGGAAGCATAGAGAATTACGAAAATCCTCGATTGCAGCTCAGTCTTGCAATCTTGTTGAAGAGGAAATTTAGTTGGATTGGAAGTTTGGAGGTGTTCGATCCAATTCTTTCTGCAACCGAATGTCGGGTAATGGAATCCTTTGGTTGTTCAATCCTATCAGTAAACGAGGAAGGACGGCGATGTGCGCAGAAGGCAACATTGTTCTTTATGCCCCATTGCGAGGCAGGGTTGTACAACAATCTTTTACAGGAAAATTGGACGGTGGAGCTGTTGAATCACGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGGACAGTTTGTATCTGAATTCAAAAGCTCACCCGTTGTTGATTCAGCGAAGTATATTTTAGCCTCAAGAAAGTTCACACGCGAGATCAAAATCAAGACACTTTCAGATGATTATTTTGGTGCTTTCCATGATTCGAGTTGGCATTTTTTCAGCCCTGTTTCACCGACGGAGCTGCAATTCACAGATCTTTGA

Protein sequence

MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKLLQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENPRLQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFFMPHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKFTREIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL
Homology
[Close]
BLAST of CmaCh15G008190 vs. Swiss-Prot
Match: SRR1_ARATH (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana GN=SRR1 PE=2 SV=2)

HSP 1 Score: 279.6 bits (714), Expect = 3.6e-74
Identity = 139/267 (52.06%), Postives = 194/267 (72.66%), Query Frame = 1 

Query: 10  VLDQSNNGDWTVVLP---RRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKLLQKMEI 69
           V + S++G+W VVLP   R+GR+RK  PK +  E+++ W   D   D  R+++L QKMEI
Sbjct: 5   VKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEI 64

Query: 70  CIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENPRLQLSLA 129
            +KK+ESS FY   +++L +  V   +   L SE++++MV+YG+GSIE+YE+PR QLS+A
Sbjct: 65  SLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIA 124

Query: 130 ILLKRKFSWIG-SLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFFMPHCEA 189
           IL+KR+F W+G ++EVFDP+LSATE   +ES GCS+LSVNE+ RR A K TLFFMPHCEA
Sbjct: 125 ILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEA 184

Query: 190 GLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKFTREIKI 249
            LY+NLLQ NW ++ L+ + LFGNSF++Y + VS    + V+ + K I+A+++ T E  I
Sbjct: 185 NLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVS--FDAEVICATKRIIAAQRVTSEFAI 244

Query: 250 KTLSDDYFGAFHDSSWHFFSPVSPTEL 273
           +T SDDYF AFHDSSWHFFS    +EL
Sbjct: 245 ETESDDYFAAFHDSSWHFFSSGIDSEL 269

[Close]
BLAST of CmaCh15G008190 vs. Swiss-Prot
Match: SRR1L_MOUSE (SRR1-like protein OS=Mus musculus GN=Srrd PE=2 SV=4)

HSP 1 Score: 100.5 bits (249), Expect = 3.0e-20
Identity = 72/213 (33.80%), Postives = 109/213 (51.17%), Query Frame = 1 

Query: 19  WTVVLPRRGRQRKTFPKLRNREDQRTWSPTD---------QANDTIRESKL----LQKME 78
           W+ V PRR R+R    + R  E  R     D         +A + +R S      L+ + 
Sbjct: 9   WSAVAPRR-RKRAAGRRPRPGEGPRAEPEADGEAVLRRLREAEEDLRISDFCSSALETIT 68

Query: 79  ICIKKVESSQFYRTLIDELGTTPVLESLNKA-----LASESKMEMVIYGVGSIENYENPR 138
            C++K    +  + L + LG   +  SL  A      +S S ++ V YG+G+  +    R
Sbjct: 69  ECLRK--QLEQLQPLTEALGRLHLGSSLPSASQEPLASSASHVKCVCYGLGTFASCPTAR 128

Query: 139 LQLSLAILLKRKFSWIGS-LEVFDPILSATECRVMESFGCSILSVNEEGRRCAQ-KATLF 198
           +QL+  +L   K     S   V+DP+ S TE  V+ S G ++LS NEEG+R  Q + T+F
Sbjct: 129 IQLAFMLLFLEKCQVPRSHCWVYDPLFSQTEVSVLTSLGVTVLSENEEGKRSVQGQPTVF 188

Query: 199 FMPHCEAGLYNNLLQENWTVELLNHVVLFGNSF 212
           +MPHC   LYNNLL  NW+ + L+ V++ GNSF
Sbjct: 189 YMPHCGTALYNNLLWSNWSADALSRVLIIGNSF 218

[Close]
BLAST of CmaCh15G008190 vs. Swiss-Prot
Match: SRR1L_HUMAN (SRR1-like protein OS=Homo sapiens GN=SRRD PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.1e-17
Identity = 60/177 (33.90%), Postives = 92/177 (51.98%), Query Frame = 1 

Query: 103 MEMVIYGVGSIENYENPRLQLSLAILLKRKFSWIGS-LEVFDPILSATECRVMESFGCSI 162
           ++ V YG+G+       R QL+  +LL  K     S   V+DP+ S  E  V+ + G ++
Sbjct: 139 LKCVCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYDPLFSQLEIEVLNTLGVTV 198

Query: 163 LSVNEEGRRCAQ-KATLFFMPHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSE 222
           LS NEEG+R  + + T+F+M HC   LYNNLL  NW+V+ L+ +V+ GNSF+        
Sbjct: 199 LSENEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALSKMVIIGNSFK---GLEER 258

Query: 223 FKSSPVVDSAKYILASRKFTREIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 278
             +  +  +  YI    K   E++    S  Y   F+D+S H+F PV   E    D+
Sbjct: 259 LLARILQKNYPYIAKILKGLEELEFPQTS-QYMDIFNDTSVHWF-PVQKLEQLSIDI 310

[Close]
BLAST of CmaCh15G008190 vs. TrEMBL
Match: A0A0A0KRU2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G457240 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 2.4e-133
Identity = 234/277 (84.48%), Postives = 257/277 (92.78%), Query Frame = 1 

Query: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60
           MAASAK +++ DQSN+GDWTVVLPRRG+Q+KTFPKLR REDQRTWSPTDQANDTIRESKL
Sbjct: 129 MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQANDTIRESKL 188

Query: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENPR 120
           LQKMEICIKK+E+SQFY+TL++EL T P LESLN+ L SESKM MV+YGVGSIENYENPR
Sbjct: 189 LQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENPR 248

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFFM 180
           LQLSLAILLKRKFSWI SLEVFDPILSATECR+MESFGCS+LS NE+GRRCA+K T+FFM
Sbjct: 249 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFFM 308

Query: 181 PHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKFT 240
           PHCEA LYNNLLQENW V LLNH+VLFGNSFEIY QFVSEFK+SPVVDS+K+ILASRKF 
Sbjct: 309 PHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKFI 368

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 278
           REIKIKT+SDDYFGAFHDSSW FFSPVSP ELQF DL
Sbjct: 369 REIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL 405

[Close]
BLAST of CmaCh15G008190 vs. TrEMBL
Match: W9R0F4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023959 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.1e-96
Identity = 177/278 (63.67%), Postives = 224/278 (80.58%), Query Frame = 1 

Query: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQR--TWSPTDQANDTIRES 60
           MAASAK L     S NG+WTVVLPRRGR+R T P  R RE Q+  +W+PTD   +++RES
Sbjct: 1   MAASAKTLTAKTSSMNGEWTVVLPRRGRKR-TCPITRTREQQQPVSWAPTDFEVNSLRES 60

Query: 61  KLLQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYEN 120
           KL QKM+IC+KK+E+SQF+ TL+D++ +  +++  +K L SE KM+MVIYG+GSIE+YEN
Sbjct: 61  KLKQKMQICMKKLETSQFFLTLLDQIRSPEIIQCFHKVLGSELKMQMVIYGIGSIESYEN 120

Query: 121 PRLQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLF 180
           PRLQLSLA+LLK KF WIG +EVFDPILSATE RV+E  GCS+LS+NE+GRR  QK T+ 
Sbjct: 121 PRLQLSLALLLKSKFGWIGDIEVFDPILSATESRVLEFLGCSVLSINEQGRRKVQKPTML 180

Query: 181 FMPHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRK 240
           FMPHCEA LY+NLLQENW +E LN++V+FGNSFE Y QFVSEFK+S V  SA+++L+++K
Sbjct: 181 FMPHCEAELYDNLLQENWRIEHLNNLVIFGNSFENYEQFVSEFKNSTVA-SARHMLSAQK 240

Query: 241 FTREIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTD 277
           FT E KI+T+ DDYFGAFHDSSWHFFSPV    LQ+ +
Sbjct: 241 FTEEFKIQTVLDDYFGAFHDSSWHFFSPVIEPGLQYVN 276

[Close]
BLAST of CmaCh15G008190 vs. TrEMBL
Match: B9S4K4_RICCO (Protein SENSITIVITY TO RED LIGHT REDUCED, putative OS=Ricinus communis GN=RCOM_0809580 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 8.9e-96
Identity = 172/274 (62.77%), Postives = 222/274 (81.02%), Query Frame = 1 

Query: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRN-REDQRTWSPTDQANDTIRESK 60
           M ASAK L V + + NG+WTVVLP RG++ + F K+R   E Q+ W P D  +D+ R+SK
Sbjct: 1   MDASAKILTVDNHTCNGEWTVVLP-RGKRSRNFSKIRTPEEQQQPWVPADLESDSNRQSK 60

Query: 61  LLQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENP 120
           L++KM IC+KKVE+SQFY+TL++++ T   L+S +K L SE KM+MVIYG+GSIE+YE P
Sbjct: 61  LIEKMNICMKKVENSQFYQTLLEQIQTPESLDSFHKVLGSELKMQMVIYGIGSIESYETP 120

Query: 121 RLQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFF 180
           R+QLS+AIL+K++FSWIG +EVFDP+LSATE RV+E+ GCS+LSVNE GRRC  + TLF+
Sbjct: 121 RIQLSVAILMKKEFSWIGDIEVFDPVLSATESRVLEALGCSVLSVNEHGRRCVTRPTLFY 180

Query: 181 MPHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKF 240
           MPHCEA LYNNLLQ NW VELLN + LFGNSFE+Y Q++SEF++S +VDS+++I+A R+F
Sbjct: 181 MPHCEAELYNNLLQANWRVELLNRIALFGNSFEVY-QYLSEFRNSTIVDSSRHIVAVREF 240

Query: 241 TREIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQ 274
           T E  IKT+SDDYF AFHDSSWHFFSP   TELQ
Sbjct: 241 THEYVIKTVSDDYFAAFHDSSWHFFSPDPKTELQ 272

[Close]
BLAST of CmaCh15G008190 vs. TrEMBL
Match: M5VQP0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009752mg PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 4.9e-94
Identity = 174/279 (62.37%), Postives = 216/279 (77.42%), Query Frame = 1 

Query: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRT--WSPTDQANDTIRES 60
           MAASAK L     + NGDWTVV  RRGRQR+  PK+  R  ++   W+PTD   +  RES
Sbjct: 1   MAASAKTLTAESHTLNGDWTVVSSRRGRQRRNPPKITIRVQKQPSHWAPTDLEINFARES 60

Query: 61  KLLQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYEN 120
           KL+QKM+IC+KK+E SQF+  L+DE+ T  ++   ++ L+SE KM+MVIYG+GSIE+YE+
Sbjct: 61  KLMQKMQICMKKLEMSQFFLNLLDEIQTPEMMNYFHRVLSSELKMKMVIYGIGSIESYES 120

Query: 121 PRLQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLF 180
           PRLQLSLAILLKRKF+WIG +EVFDPILSATE RV+E+  C +LS+NE+GRR A+K T+F
Sbjct: 121 PRLQLSLAILLKRKFNWIGDIEVFDPILSATESRVLEALECCVLSINEQGRRQAEKPTMF 180

Query: 181 FMPHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRK 240
           FMPHCEA LY+NLLQ NW   LLN  VLFGNSFE Y Q +SE+K+S +VDS ++ILA RK
Sbjct: 181 FMPHCEAELYDNLLQANWEARLLNCTVLFGNSFETYEQHLSEYKNSAIVDSTRHILAVRK 240

Query: 241 FTREIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 278
           FT E +IKT+SD YF AFHDSSWHFF PV  TELQ + L
Sbjct: 241 FTDEFRIKTISDTYFSAFHDSSWHFFRPVLETELQLSYL 279

[Close]
BLAST of CmaCh15G008190 vs. TrEMBL
Match: A5B9I4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012927 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 1.1e-93
Identity = 173/269 (64.31%), Postives = 214/269 (79.55%), Query Frame = 1 

Query: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRNRED-QRTWSPTDQANDTIRESK 60
           MAASAK + +       DWTVVLP RG+ R+ F K ++ E  Q+ W+PTD   D  RESK
Sbjct: 1   MAASAKTITLESSDAISDWTVVLPXRGKXRRNFLKSKHPEQHQQPWAPTDLEMDLHRESK 60

Query: 61  LLQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENP 120
           L+QK++ICI+K+ +S FY  L+D++ T  +LE+  + L SE KM+MV+YG+GSIE+YE P
Sbjct: 61  LMQKIQICIRKLGNSTFYHVLLDQVQTPHMLEAFLRVLGSELKMQMVVYGIGSIESYEPP 120

Query: 121 RLQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFF 180
           RLQLSLAILLKRKFSWIG ++VFDPILSATE RV+E+ GCS+LSVNE+GRR A K TLFF
Sbjct: 121 RLQLSLAILLKRKFSWIGDIKVFDPILSATESRVLEALGCSVLSVNEQGRRQASKPTLFF 180

Query: 181 MPHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKF 240
           MPHCEA LY+NLLQENW  E +N++VLFGNSF  Y Q VSEF+SS +VDS+++ILA RKF
Sbjct: 181 MPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVDSSRHILAVRKF 240

Query: 241 TREIKIKTLSDDYFGAFHDSSWHFFSPVS 269
           TRE  IKT+SDDYFGAFHDSSWHFFS V+
Sbjct: 241 TREFAIKTVSDDYFGAFHDSSWHFFSLVA 269

[Close]
BLAST of CmaCh15G008190 vs. TAIR10
Match: AT5G59560.1 (AT5G59560.1 sensitivity to red light reduced protein (SRR1))

HSP 1 Score: 279.6 bits (714), Expect = 2.0e-75
Identity = 139/267 (52.06%), Postives = 194/267 (72.66%), Query Frame = 1 

Query: 10  VLDQSNNGDWTVVLP---RRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKLLQKMEI 69
           V + S++G+W VVLP   R+GR+RK  PK +  E+++ W   D   D  R+++L QKMEI
Sbjct: 5   VKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEI 64

Query: 70  CIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENPRLQLSLA 129
            +KK+ESS FY   +++L +  V   +   L SE++++MV+YG+GSIE+YE+PR QLS+A
Sbjct: 65  SLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIA 124

Query: 130 ILLKRKFSWIG-SLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFFMPHCEA 189
           IL+KR+F W+G ++EVFDP+LSATE   +ES GCS+LSVNE+ RR A K TLFFMPHCEA
Sbjct: 125 ILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEA 184

Query: 190 GLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKFTREIKI 249
            LY+NLLQ NW ++ L+ + LFGNSF++Y + VS    + V+ + K I+A+++ T E  I
Sbjct: 185 NLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVS--FDAEVICATKRIIAAQRVTSEFAI 244

Query: 250 KTLSDDYFGAFHDSSWHFFSPVSPTEL 273
           +T SDDYF AFHDSSWHFFS    +EL
Sbjct: 245 ETESDDYFAAFHDSSWHFFSSGIDSEL 269

[Close]
BLAST of CmaCh15G008190 vs. NCBI nr
Match: gi|659072440|ref|XP_008465606.1| (PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis melo])

HSP 1 Score: 490.7 bits (1262), Expect = 1.6e-135
Identity = 237/277 (85.56%), Postives = 259/277 (93.50%), Query Frame = 1 

Query: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60
           MAASAK +A+ DQSNNGDWTVVLPRRG+QRK FPKLRNREDQRTWSPTDQANDTIRESKL
Sbjct: 1   MAASAKTVAIPDQSNNGDWTVVLPRRGKQRKNFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENPR 120
           LQKME+CIKK+ESSQFYRTL++EL T P LESLN+ L SESKM +VIYGVGSIENYENPR
Sbjct: 61  LQKMEMCIKKLESSQFYRTLVEELETVPFLESLNRVLDSESKMGVVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFFM 180
           LQLSLAILLKRKFSWI SLEVFDPILSATECR+MESFGCS+LSVNE+GRRCA+K T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSVNEQGRRCAEKPTMFFM 180

Query: 181 PHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKFT 240
           PHCEA LYNNLLQENW V+LLNH++LFGNSFEIY QFVSEFK+SPVVDS+ +ILASRKF 
Sbjct: 181 PHCEAELYNNLLQENWKVKLLNHIMLFGNSFEIYEQFVSEFKNSPVVDSSNFILASRKFV 240

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 278
           REIKIKT+SDDYFGAFHDSSWHFFSPVSP EL+F DL
Sbjct: 241 REIKIKTVSDDYFGAFHDSSWHFFSPVSPLELKFIDL 277

[Close]
BLAST of CmaCh15G008190 vs. NCBI nr
Match: gi|449452014|ref|XP_004143755.1| (PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis sativus])

HSP 1 Score: 483.0 bits (1242), Expect = 3.4e-133
Identity = 234/277 (84.48%), Postives = 257/277 (92.78%), Query Frame = 1 

Query: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60
           MAASAK +++ DQSN+GDWTVVLPRRG+Q+KTFPKLR REDQRTWSPTDQANDTIRESKL
Sbjct: 1   MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQANDTIRESKL 60

Query: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENPR 120
           LQKMEICIKK+E+SQFY+TL++EL T P LESLN+ L SESKM MV+YGVGSIENYENPR
Sbjct: 61  LQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFFM 180
           LQLSLAILLKRKFSWI SLEVFDPILSATECR+MESFGCS+LS NE+GRRCA+K T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFFM 180

Query: 181 PHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKFT 240
           PHCEA LYNNLLQENW V LLNH+VLFGNSFEIY QFVSEFK+SPVVDS+K+ILASRKF 
Sbjct: 181 PHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKFI 240

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 278
           REIKIKT+SDDYFGAFHDSSW FFSPVSP ELQF DL
Sbjct: 241 REIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL 277

[Close]
BLAST of CmaCh15G008190 vs. NCBI nr
Match: gi|700195945|gb|KGN51122.1| (hypothetical protein Csa_5G457240 [Cucumis sativus])

HSP 1 Score: 483.0 bits (1242), Expect = 3.4e-133
Identity = 234/277 (84.48%), Postives = 257/277 (92.78%), Query Frame = 1 

Query: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60
           MAASAK +++ DQSN+GDWTVVLPRRG+Q+KTFPKLR REDQRTWSPTDQANDTIRESKL
Sbjct: 129 MAASAKTVSIPDQSNSGDWTVVLPRRGKQKKTFPKLRIREDQRTWSPTDQANDTIRESKL 188

Query: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENPR 120
           LQKMEICIKK+E+SQFY+TL++EL T P LESLN+ L SESKM MV+YGVGSIENYENPR
Sbjct: 189 LQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIENYENPR 248

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFFM 180
           LQLSLAILLKRKFSWI SLEVFDPILSATECR+MESFGCS+LS NE+GRRCA+K T+FFM
Sbjct: 249 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKPTMFFM 308

Query: 181 PHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKFT 240
           PHCEA LYNNLLQENW V LLNH+VLFGNSFEIY QFVSEFK+SPVVDS+K+ILASRKF 
Sbjct: 309 PHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILASRKFI 368

Query: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 278
           REIKIKT+SDDYFGAFHDSSW FFSPVSP ELQF DL
Sbjct: 369 REIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL 405

[Close]
BLAST of CmaCh15G008190 vs. NCBI nr
Match: gi|703096898|ref|XP_010095970.1| (hypothetical protein L484_023959 [Morus notabilis])

HSP 1 Score: 359.8 bits (922), Expect = 4.4e-96
Identity = 177/278 (63.67%), Postives = 224/278 (80.58%), Query Frame = 1 

Query: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQR--TWSPTDQANDTIRES 60
           MAASAK L     S NG+WTVVLPRRGR+R T P  R RE Q+  +W+PTD   +++RES
Sbjct: 1   MAASAKTLTAKTSSMNGEWTVVLPRRGRKR-TCPITRTREQQQPVSWAPTDFEVNSLRES 60

Query: 61  KLLQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYEN 120
           KL QKM+IC+KK+E+SQF+ TL+D++ +  +++  +K L SE KM+MVIYG+GSIE+YEN
Sbjct: 61  KLKQKMQICMKKLETSQFFLTLLDQIRSPEIIQCFHKVLGSELKMQMVIYGIGSIESYEN 120

Query: 121 PRLQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLF 180
           PRLQLSLA+LLK KF WIG +EVFDPILSATE RV+E  GCS+LS+NE+GRR  QK T+ 
Sbjct: 121 PRLQLSLALLLKSKFGWIGDIEVFDPILSATESRVLEFLGCSVLSINEQGRRKVQKPTML 180

Query: 181 FMPHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRK 240
           FMPHCEA LY+NLLQENW +E LN++V+FGNSFE Y QFVSEFK+S V  SA+++L+++K
Sbjct: 181 FMPHCEAELYDNLLQENWRIEHLNNLVIFGNSFENYEQFVSEFKNSTVA-SARHMLSAQK 240

Query: 241 FTREIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTD 277
           FT E KI+T+ DDYFGAFHDSSWHFFSPV    LQ+ +
Sbjct: 241 FTEEFKIQTVLDDYFGAFHDSSWHFFSPVIEPGLQYVN 276

[Close]
BLAST of CmaCh15G008190 vs. NCBI nr
Match: gi|255559808|ref|XP_002520923.1| (PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Ricinus communis])

HSP 1 Score: 358.2 bits (918), Expect = 1.3e-95
Identity = 172/274 (62.77%), Postives = 222/274 (81.02%), Query Frame = 1 

Query: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRN-REDQRTWSPTDQANDTIRESK 60
           M ASAK L V + + NG+WTVVLP RG++ + F K+R   E Q+ W P D  +D+ R+SK
Sbjct: 1   MDASAKILTVDNHTCNGEWTVVLP-RGKRSRNFSKIRTPEEQQQPWVPADLESDSNRQSK 60

Query: 61  LLQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENP 120
           L++KM IC+KKVE+SQFY+TL++++ T   L+S +K L SE KM+MVIYG+GSIE+YE P
Sbjct: 61  LIEKMNICMKKVENSQFYQTLLEQIQTPESLDSFHKVLGSELKMQMVIYGIGSIESYETP 120

Query: 121 RLQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFF 180
           R+QLS+AIL+K++FSWIG +EVFDP+LSATE RV+E+ GCS+LSVNE GRRC  + TLF+
Sbjct: 121 RIQLSVAILMKKEFSWIGDIEVFDPVLSATESRVLEALGCSVLSVNEHGRRCVTRPTLFY 180

Query: 181 MPHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKF 240
           MPHCEA LYNNLLQ NW VELLN + LFGNSFE+Y Q++SEF++S +VDS+++I+A R+F
Sbjct: 181 MPHCEAELYNNLLQANWRVELLNRIALFGNSFEVY-QYLSEFRNSTIVDSSRHIVAVREF 240

Query: 241 TREIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQ 274
           T E  IKT+SDDYF AFHDSSWHFFSP   TELQ
Sbjct: 241 THEYVIKTVSDDYFAAFHDSSWHFFSPDPKTELQ 272

The following BLAST results are available for this feature:
BLAST of CmaCh15G008190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SRR1_ARATH3.6e-7452.06Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana GN=SRR1 PE=2 ... [more]
SRR1L_MOUSE3.0e-2033.80SRR1-like protein OS=Mus musculus GN=Srrd PE=2 SV=4[more]
SRR1L_HUMAN1.1e-1733.90SRR1-like protein OS=Homo sapiens GN=SRRD PE=2 SV=1[more]
BLAST of CmaCh15G008190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRU2_CUCSA2.4e-13384.48Uncharacterized protein OS=Cucumis sativus GN=Csa_5G457240 PE=4 SV=1[more]
W9R0F4_9ROSA3.1e-9663.67Uncharacterized protein OS=Morus notabilis GN=L484_023959 PE=4 SV=1[more]
B9S4K4_RICCO8.9e-9662.77Protein SENSITIVITY TO RED LIGHT REDUCED, putative OS=Ricinus communis GN=RCOM_0... [more]
M5VQP0_PRUPE4.9e-9462.37Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009752mg PE=4 SV=1[more]
A5B9I4_VITVI1.1e-9364.31Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012927 PE=4 SV=1[more]
BLAST of CmaCh15G008190 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59560.12.0e-7552.06 sensitivity to red light reduced protein (SRR1)[more]
BLAST of CmaCh15G008190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072440|ref|XP_008465606.1|1.6e-13585.56PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis melo][more]
gi|449452014|ref|XP_004143755.1|3.4e-13384.48PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Cucumis sativus][more]
gi|700195945|gb|KGN51122.1|3.4e-13384.48hypothetical protein Csa_5G457240 [Cucumis sativus][more]
gi|703096898|ref|XP_010095970.1|4.4e-9663.67hypothetical protein L484_023959 [Morus notabilis][more]
gi|255559808|ref|XP_002520923.1|1.3e-9562.77PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012942SRR1-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007623 circadian rhythm
biological_process GO:0010017 red or far-red light signaling pathway
biological_process GO:0009585 red, far-red light phototransduction
biological_process GO:0042752 regulation of circadian rhythm
biological_process GO:0008150 biological_process
cellular_component GO:0044424 intracellular part
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G008190.1CmaCh15G008190.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012942Sensitivity To Red Light Reduced-like, SRR1PFAMPF07985SRR1coord: 105..157
score: 2.3
NoneNo IPR availablePANTHERPTHR28626FAMILY NOT NAMEDcoord: 9..266
score: 2.5
NoneNo IPR availablePANTHERPTHR28626:SF3SRR1-LIKE PROTEINcoord: 9..266
score: 2.5