CsGy5G013660 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G013660
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionE3 ubiquitin-protein ligase RING1-like
LocationChr5 : 17895098 .. 17895997 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTCCGCCGTCGACAAGCCTTTTTTCTGTCACCAGTGTGATCGCGCGGTTACTGTTTCTGTATCCATTTCCTCCGATCCTCTTTGCCCACTTTGCCACGAGGGTTTTCTCGAAGAGTACGACAATTCCAATTCCAATCTCAATTTTGATCCCACGTCCTTTTTCCTTCCCCAACCTTTCCGTCGTTTCAATCCGCTTGTTTTCTCCTCTTCTACAGTTGTTGATCTTCAAAACCCTGGTATATTTTCAAGAACTTTGGCTCCGCCTTCCCAATCCACTTCCTCTGTTCACCACGAGCCCTACGATCCTTTTGTTTTTCTTCAGAATCATTTACGGAGCATCTTCGAAAGTGGTGCCGATGTTGTCTTTGAAATTCCTCGCCATTCTTCCCACTCTGGTGTTCCAATGCCTCAAAATGTGGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTTATTCAGTTGCTGGCTGAAAATGATCCCAACCGATATGGAACTCCGCCGGCTTCGAAATCGGCAATTGAGAAGCTTTCGACTATCACTGTTACTGAGGACCTTCTGAATTCGGAAATGAATCAGTGTGCCGTTTGCATAGATGATTTTGGAAAAGGTATTGTGGTTAAGCAAATGCCATGCAAGCATGTATTTCATGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCATGCCCTATTTGCCGGTTCGAGTTGCCTACGGATGATTCTGATTACGAGAATCGAACACGTGGAAACCGGATGCAGGGGAATGAATCTTCCGGGGAAGAATCAGGGTCAGGAAGCAGTGGGAGCAGCATGAGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTGTGGTGGCCGTTTGGTAGCCGGAATGATGGGAGTGACAGTGAATGA

mRNA sequence

ATGTCCTCCGCCGTCGACAAGCCTTTTTTCTGTCACCAGTGTGATCGCGCGGTTACTGTTTCTGTATCCATTTCCTCCGATCCTCTTTGCCCACTTTGCCACGAGGGTTTTCTCGAAGAGTACGACAATTCCAATTCCAATCTCAATTTTGATCCCACGTCCTTTTTCCTTCCCCAACCTTTCCGTCGTTTCAATCCGCTTGTTTTCTCCTCTTCTACAGTTGTTGATCTTCAAAACCCTGGTATATTTTCAAGAACTTTGGCTCCGCCTTCCCAATCCACTTCCTCTGTTCACCACGAGCCCTACGATCCTTTTGTTTTTCTTCAGAATCATTTACGGAGCATCTTCGAAAGTGGTGCCGATGTTGTCTTTGAAATTCCTCGCCATTCTTCCCACTCTGGTGTTCCAATGCCTCAAAATGTGGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTTATTCAGTTGCTGGCTGAAAATGATCCCAACCGATATGGAACTCCGCCGGCTTCGAAATCGGCAATTGAGAAGCTTTCGACTATCACTGTTACTGAGGACCTTCTGAATTCGGAAATGAATCAGTGTGCCGTTTGCATAGATGATTTTGGAAAAGGTATTGTGGTTAAGCAAATGCCATGCAAGCATGTATTTCATGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCATGCCCTATTTGCCGGTTCGAGTTGCCTACGGATGATTCTGATTACGAGAATCGAACACGTGGAAACCGGATGCAGGGGAATGAATCTTCCGGGGAAGAATCAGGGTCAGGAAGCAGTGGGAGCAGCATGAGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTGTGGTGGCCGTTTGGTAGCCGGAATGATGGGAGTGACAGTGAATGA

Coding sequence (CDS)

ATGTCCTCCGCCGTCGACAAGCCTTTTTTCTGTCACCAGTGTGATCGCGCGGTTACTGTTTCTGTATCCATTTCCTCCGATCCTCTTTGCCCACTTTGCCACGAGGGTTTTCTCGAAGAGTACGACAATTCCAATTCCAATCTCAATTTTGATCCCACGTCCTTTTTCCTTCCCCAACCTTTCCGTCGTTTCAATCCGCTTGTTTTCTCCTCTTCTACAGTTGTTGATCTTCAAAACCCTGGTATATTTTCAAGAACTTTGGCTCCGCCTTCCCAATCCACTTCCTCTGTTCACCACGAGCCCTACGATCCTTTTGTTTTTCTTCAGAATCATTTACGGAGCATCTTCGAAAGTGGTGCCGATGTTGTCTTTGAAATTCCTCGCCATTCTTCCCACTCTGGTGTTCCAATGCCTCAAAATGTGGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTTATTCAGTTGCTGGCTGAAAATGATCCCAACCGATATGGAACTCCGCCGGCTTCGAAATCGGCAATTGAGAAGCTTTCGACTATCACTGTTACTGAGGACCTTCTGAATTCGGAAATGAATCAGTGTGCCGTTTGCATAGATGATTTTGGAAAAGGTATTGTGGTTAAGCAAATGCCATGCAAGCATGTATTTCATGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCATGCCCTATTTGCCGGTTCGAGTTGCCTACGGATGATTCTGATTACGAGAATCGAACACGTGGAAACCGGATGCAGGGGAATGAATCTTCCGGGGAAGAATCAGGGTCAGGAAGCAGTGGGAGCAGCATGAGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTGTGGTGGCCGTTTGGTAGCCGGAATGATGGGAGTGACAGTGAATGA

Protein sequence

MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELPTDDSDYENRTRGNRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE
Homology
[Close]
BLAST of CsGy5G013660 vs. NCBI nr
Match: XP_004149872.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_011655156.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >KGN50936.1 hypothetical protein Csa_5G350590 [Cucumis sativus])

HSP 1 Score: 581.3 bits (1497), Expect = 1.9e-162
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0 

Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60
           MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP
Sbjct: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60

Query: 61  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 120
           FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA
Sbjct: 61  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 120

Query: 121 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 180
           DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST
Sbjct: 121 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 180

Query: 181 ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 240
           ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP
Sbjct: 181 ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 240

Query: 241 TDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFRVPLWWPFGSRNDGSDSE 300
           TDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFRVPLWWPFGSRNDGSDSE
Sbjct: 241 TDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFRVPLWWPFGSRNDGSDSE 299

[Close]
BLAST of CsGy5G013660 vs. NCBI nr
Match: XP_022938450.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata])

HSP 1 Score: 474.6 bits (1220), Expect = 2.6e-130
Identity = 228/298 (76.51%), Postives = 241/298 (80.87%), Query Frame = 0 

Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDN--SNSNLNFDPTSFFLPQP 62
           +AVDKPFFCHQCDRAVTV VS+SSDPLCP C+EGFLEEY+N         D  +  LP P
Sbjct: 8   AAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENXXXXXXXXXDRGTLLLPDP 67

Query: 63  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 122
           FR FNPLV SSSTVVDLQNPG+FSRTL+  SQS SSV  EPYDPFVFLQNHLR IF+SGA
Sbjct: 68  FRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRGIFDSGA 127

Query: 123 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 182
           DVVFEIPRH+SHSG  MPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIEKL T
Sbjct: 128 DVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLPT 187

Query: 183 ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 242
           +TVTEDLLNSEMNQCAVCID F K   VKQMPCKHVFHDYC+LPWLELHNSCP+CRFELP
Sbjct: 188 VTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCPVCRFELP 247

Query: 243 TDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFRVPLWWPFGSRNDGSDS 299
           TDDSDYENRTR                        RVERRFRVPLWWPFG RNDGSDS
Sbjct: 248 TDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRNDGSDS 305

[Close]
BLAST of CsGy5G013660 vs. NCBI nr
Match: XP_023551575.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 228/298 (76.51%), Postives = 240/298 (80.54%), Query Frame = 0 

Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDN--SNSNLNFDPTSFFLPQP 62
           +AVDKPFFCHQCDRAVTV VS SSDPLCP C+EGFLEEY+N         D  +  LP P
Sbjct: 8   AAVDKPFFCHQCDRAVTVIVSPSSDPLCPFCNEGFLEEYENXXXXXXXXXDRGTLLLPDP 67

Query: 63  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 122
           FR FNPLV SSSTVVDLQNPG+FSRTL+  SQS SSV  EPYDPFVFLQNHLR IF+SGA
Sbjct: 68  FRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRGIFDSGA 127

Query: 123 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 182
           DVVFEIPRH+SHSG  MPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIEKL T
Sbjct: 128 DVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLPT 187

Query: 183 ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 242
           +TVTEDLLNSEMNQCAVCID F K   VKQMPCKHVFHDYC+LPWLELHNSCP+CRFELP
Sbjct: 188 MTVTEDLLNSEMNQCAVCIDGFEKDTEVKQMPCKHVFHDYCILPWLELHNSCPVCRFELP 247

Query: 243 TDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFRVPLWWPFGSRNDGSDS 299
           TDDSDYENRTR                        RVERRFRVPLWWPFG RNDGSDS
Sbjct: 248 TDDSDYENRTRASQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRNDGSDS 305

[Close]
BLAST of CsGy5G013660 vs. NCBI nr
Match: XP_022993143.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima])

HSP 1 Score: 464.2 bits (1193), Expect = 3.5e-127
Identity = 234/298 (78.52%), Postives = 248/298 (83.22%), Query Frame = 0 

Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDN--SNSNLNFDPTSFFLPQP 62
           +AVDKPFFCHQCDRAVTV +S SSDPLCP C+EGFLEEY+N         D  +  LP P
Sbjct: 8   AAVDKPFFCHQCDRAVTVILSPSSDPLCPFCNEGFLEEYENXXXXXXXXXDRGTLLLPDP 67

Query: 63  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 122
           FR FNPLV SSSTVVDLQNPG+FSRTL+  SQS SSV  E YDPFVFLQNHLR IF+SGA
Sbjct: 68  FRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEQYDPFVFLQNHLRGIFDSGA 127

Query: 123 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 182
           DVVFEIPRH+SHSG  MPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTPPASKS IEKL  
Sbjct: 128 DVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSVIEKLPN 187

Query: 183 ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 242
           +TVTEDLLNSEMNQCAVCID F K   VKQMPCKHVFHDYC+LPWLELHNSCP+CRFELP
Sbjct: 188 VTVTEDLLNSEMNQCAVCIDGFEKDTEVKQMPCKHVFHDYCILPWLELHNSCPVCRFELP 247

Query: 243 TDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFRVPLWWPFGSRNDGSDS 299
           TDDSDYENRTR           XXXXXXXXXXX  RVERRFRVPLWWPFG RNDG+DS
Sbjct: 248 TDDSDYENRTRGSQVQANESSGXXXXXXXXXXXXXRVERRFRVPLWWPFGGRNDGNDS 305

[Close]
BLAST of CsGy5G013660 vs. NCBI nr
Match: XP_023554317.1 (E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554326.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554330.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554338.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554347.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554356.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554365.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554375.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554385.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554392.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554402.1 E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 464.2 bits (1193), Expect = 3.5e-127
Identity = 224/301 (74.42%), Postives = 238/301 (79.07%), Query Frame = 0 

Query: 2   SSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQPF 61
           S+AVDK FFCHQCDR VTV+VS S +PLCP C+EGFLEEYD  +SN N D  SFFLP PF
Sbjct: 3   SAAVDKSFFCHQCDRDVTVAVSNSLEPLCPFCNEGFLEEYDTFSSNANLDSRSFFLPDPF 62

Query: 62  RRFNPLVFSSSTVVDLQNPGIFSRTLAPPS------QSTSSVHHEPYDPFVFLQNHLRSI 121
           R FNPL FSSSTVVDLQNPG+FSRTL+P S      QS SS   EP+DPFVFLQNHLR I
Sbjct: 63  RDFNPLAFSSSTVVDLQNPGLFSRTLSPASQLWNRNQSDSSGQPEPFDPFVFLQNHLRGI 122

Query: 122 FESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAI 181
           F+SGADVVFEI  H S SGV MPQNVGDYFIGPGLEQLIQLLAENDPNR+GTPPASKSAI
Sbjct: 123 FDSGADVVFEIQGHPSRSGVSMPQNVGDYFIGPGLEQLIQLLAENDPNRHGTPPASKSAI 182

Query: 182 EKLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPIC 241
           EKL  +TVTEDLLNSEMNQCAVC+D F KGI VKQMPCKH+FHDYCLLPWLELHNSCP+C
Sbjct: 183 EKLQNVTVTEDLLNSEMNQCAVCLDGFEKGIEVKQMPCKHIFHDYCLLPWLELHNSCPVC 242

Query: 242 RFELPTDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFRVPLWWPFGSRNDG 297
           RFEL TDDSDYENRTR                        RVER FRVPLWWPFG RNDG
Sbjct: 243 RFELATDDSDYENRTRGRRVQANESNGEEPGSGNSGSSSERVERSFRVPLWWPFGGRNDG 302

[Close]
BLAST of CsGy5G013660 vs. TAIR10
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 313.5 bits (802), Expect = 1.4e-85
Identity = 150/256 (58.59%), Postives = 185/256 (72.27%), Query Frame = 0 

Query: 5   VDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD--NSNSNLNFDPTS----FFLP 64
           VDK FFC+QC++ VT+S+S S+DP CP+C++GFLEEY+  N N +LNF+P S    F + 
Sbjct: 17  VDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMA 76

Query: 65  QPFRRFNPLVFSSSTVV--DLQNPGIFSRTLAPPSQST-SSVHHEPYDPFVFLQNHLRSI 124
            PF    PL+F SS      +    +F  ++ P ++ST  +   + +DPF FLQNHL+++
Sbjct: 77  DPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTL 136

Query: 125 FESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAI 184
             SG    F I  H S  G  MP N GDYF GPGLEQLIQ LAENDPNRYGTPPASKSAI
Sbjct: 137 RSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI 196

Query: 185 EKLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPIC 244
           + L T+ VT+D+L SEMNQCAVC+D+F  G  VKQMPCKHVFH  CLLPWLELHNSCP+C
Sbjct: 197 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 256

Query: 245 RFELPTDDSDYENRTR 252
           RFELPTDD DYENR++
Sbjct: 257 RFELPTDDPDYENRSQ 272

[Close]
BLAST of CsGy5G013660 vs. TAIR10
Match: AT1G55530.1 (RING/U-box superfamily protein)

HSP 1 Score: 159.1 bits (401), Expect = 4.3e-39
Identity = 102/291 (35.05%), Postives = 141/291 (48.45%), Query Frame = 0 

Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDP------TS 60
           M  AV   ++CH C +  TV+  + ++  CP C  GF+EE ++ + + + DP       S
Sbjct: 1   MEEAVVTRYWCHMCSQ--TVNPVMEAEIKCPFCQSGFVEEMEDDDDHDSSDPADVRANNS 60

Query: 61  FFLP-------QPF-RRFNPLVFS----------------SSTVVDLQNPGIFSRT---- 120
            + P        P  RR N  V S                    +D Q   I  R     
Sbjct: 61  LWAPILMELMNDPVRRRRNQSVESVEDNQNEVQTENNEDDGENDLDWQLQEILRRRRRHS 120

Query: 121 -------------LAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGADVVFEIPRHSSHS 180
                        L+  S+ST +  + P           R I  + ++    +   +   
Sbjct: 121 AAVLQLLQGIRAGLSVESESTGNGGNNPG----------RVILINTSNQTITVQNSADMD 180

Query: 181 GVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLSTITVTEDLLNSEMN 240
            VP   ++GDYFIGPG E L+Q LAENDPNRYGTPPA K A+E L+T+ + E L      
Sbjct: 181 SVP-AGSLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL------ 240

Query: 241 QCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELPTDDS 245
           QC+VC+DDF  G   K MPC H FH  CLLPWLELH+SCP+CR++LP D++
Sbjct: 241 QCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEA 272

[Close]
BLAST of CsGy5G013660 vs. TAIR10
Match: AT5G56340.1 (RING/U-box superfamily protein)

HSP 1 Score: 152.1 bits (383), Expect = 5.3e-37
Identity = 69/116 (59.48%), Postives = 85/116 (73.28%), Query Frame = 0 

Query: 136 PMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLSTITVTEDLLNSEMNQC 195
           P   ++GDYFIGPGL+ L+Q LAENDPNR GTPPA K A+E L T+ + E L      QC
Sbjct: 206 PSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL------QC 265

Query: 196 AVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELPTD-DSDYENRT 251
           +VC+DDF KG   K+MPCKH FH  C++PWLELH+SCP+CRFELP+  D D E +T
Sbjct: 266 SVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKT 315

[Close]
BLAST of CsGy5G013660 vs. TAIR10
Match: AT3G13430.1 (RING/U-box superfamily protein)

HSP 1 Score: 145.6 bits (366), Expect = 4.9e-35
Identity = 65/107 (60.75%), Postives = 81/107 (75.70%), Query Frame = 0 

Query: 140 NVGDYFIGPGLEQLIQLLAEND-PNRYGTPPASKSAIEKLSTITVTEDLLNSEMNQCAVC 199
           ++GDYFIGPG E L+Q LAEND  NRYGTPPA+K A+E L+ + + + LL     QC+VC
Sbjct: 174 SLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLL-----QCSVC 233

Query: 200 IDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELPTDDSD 246
           +DDF  G+  K+MPCKH FH  CLLPWLELH+SCP+CR+ LPT D D
Sbjct: 234 LDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDD 275

[Close]
BLAST of CsGy5G013660 vs. TAIR10
Match: AT3G56580.2 (RING/U-box superfamily protein)

HSP 1 Score: 137.1 bits (344), Expect = 1.8e-32
Identity = 85/248 (34.27%), Postives = 124/248 (50.00%), Query Frame = 0 

Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD----NSNSNLNFDPTSFFLP 62
           S++    +CH+C RAV +    + D +C  C  GF+EE D     ++ ++  DPT F L 
Sbjct: 2   SSIRNTHWCHRCQRAVWLR---ARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPT-FDLM 61

Query: 63  QPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFL--QNHLRSIF 122
           + F       F  S + +      + R ++    S  S       P +    Q   R   
Sbjct: 62  EAFS-----AFMRSRLAERS----YDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAG 121

Query: 123 ESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIE 182
              + V   +   +   G+    N GDYF GPGLE+LI+ L+    +R G PPA KS+I+
Sbjct: 122 GDNSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSID 181

Query: 183 KLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICR 242
            L TI +T+  L S  + C VC D+F      KQMPC H++H  C++PWL  HNSCP+CR
Sbjct: 182 ALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCR 235

Query: 243 FELPTDDS 245
            ELP+  S
Sbjct: 242 KELPSRGS 235

[Close]
BLAST of CsGy5G013660 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.5e-84
Identity = 150/256 (58.59%), Postives = 185/256 (72.27%), Query Frame = 0 

Query: 5   VDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD--NSNSNLNFDPTS----FFLP 64
           VDK FFC+QC++ VT+S+S S+DP CP+C++GFLEEY+  N N +LNF+P S    F + 
Sbjct: 17  VDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMA 76

Query: 65  QPFRRFNPLVFSSSTVV--DLQNPGIFSRTLAPPSQST-SSVHHEPYDPFVFLQNHLRSI 124
            PF    PL+F SS      +    +F  ++ P ++ST  +   + +DPF FLQNHL+++
Sbjct: 77  DPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTL 136

Query: 125 FESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAI 184
             SG    F I  H S  G  MP N GDYF GPGLEQLIQ LAENDPNRYGTPPASKSAI
Sbjct: 137 RSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI 196

Query: 185 EKLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPIC 244
           + L T+ VT+D+L SEMNQCAVC+D+F  G  VKQMPCKHVFH  CLLPWLELHNSCP+C
Sbjct: 197 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 256

Query: 245 RFELPTDDSDYENRTR 252
           RFELPTDD DYENR++
Sbjct: 257 RFELPTDDPDYENRSQ 272

[Close]
BLAST of CsGy5G013660 vs. Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 9.7e-81
Identity = 160/313 (51.12%), Postives = 189/313 (60.38%), Query Frame = 0 

Query: 6   DKPFFCHQCDRAVTVSVS-ISSDPLCPLCHEGFLEEYDNSNSN-----LNFDPTS----- 65
           +KPFFC+QC+R V V++S  SSDP CP+C+EGFLEEYDN N N     LN +P S     
Sbjct: 20  NKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHD 79

Query: 66  --FFLPQPFRRFNPLVFSS--------STVVDLQNPGIFSRTLAPPSQSTSSVHHEP--Y 125
               L  PF    PL+F S           +D  NP +        S  T S   +P  +
Sbjct: 80  LFLTLSDPFASLLPLLFPSXXXXXXXXXXXIDPNNPSL--------SGPTRSGRGDPFAF 139

Query: 126 DPFVFLQNHLRSIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDP 185
           DPF F+QNHL  +  SGA + F I  + S  G  +P N+GDYFIGPGLEQLIQ LAENDP
Sbjct: 140 DPFTFIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDP 199

Query: 186 NRYGTPPASKSAIEKLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCL 245
           NRYGTPPASKSAIE L  + +T+  LNSE NQCAVC+DDF +G   KQMPCKH++H  CL
Sbjct: 200 NRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCL 259

Query: 246 LPWLELHNSCPICRFELPTDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFR 296
           LPWLELHNSCP+CR ELPTDD DYE R R                       R VER FR
Sbjct: 260 LPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDN-RTVERSFR 319

[Close]
BLAST of CsGy5G013660 vs. Swiss-Prot
Match: sp|Q94AK4|RZF1_ARATH (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.2e-31
Identity = 85/248 (34.27%), Postives = 124/248 (50.00%), Query Frame = 0 

Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD----NSNSNLNFDPTSFFLP 62
           S++    +CH+C RAV +    + D +C  C  GF+EE D     ++ ++  DPT F L 
Sbjct: 2   SSIRNTHWCHRCQRAVWLR---ARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPT-FDLM 61

Query: 63  QPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFL--QNHLRSIF 122
           + F       F  S + +      + R ++    S  S       P +    Q   R   
Sbjct: 62  EAFS-----AFMRSRLAERS----YDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAG 121

Query: 123 ESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIE 182
              + V   +   +   G+    N GDYF GPGLE+LI+ L+    +R G PPA KS+I+
Sbjct: 122 GDNSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSID 181

Query: 183 KLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICR 242
            L TI +T+  L S  + C VC D+F      KQMPC H++H  C++PWL  HNSCP+CR
Sbjct: 182 ALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCR 235

Query: 243 FELPTDDS 245
            ELP+  S
Sbjct: 242 KELPSRGS 235

[Close]
BLAST of CsGy5G013660 vs. Swiss-Prot
Match: sp|Q6AVN2|SIRP1_ORYSJ (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.4e-31
Identity = 84/269 (31.23%), Postives = 134/269 (49.81%), Query Frame = 0 

Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60
           M+ A    ++CH+C++A  +  ++  +  CP C  GF+EE  +       +  +   P+P
Sbjct: 1   MAEAAITRYWCHECEQA--IEEAMVDEIKCPSCGGGFVEEMTDE----EIERLTNRQPEP 60

Query: 61  -FRRFNPLVFSSSTV--------VDLQNPGIFSR----------------TLAPPSQSTS 120
            F ++NP+     T+        +  +  G   R                 LA   +  S
Sbjct: 61  GFSQWNPIEHPGETMDSDDEDNDLGREFEGFIRRHRRASTLRRVLDSIHDDLADDQERDS 120

Query: 121 SVHHEPYDPFVFLQNHLRSIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQ 180
           S+    ++  + LQ  +    E   D        ++  G+     + +Y +G GL  L+Q
Sbjct: 121 SILINAFNQALALQGSVLDPDEGQGDQ----GGSTNDDGL-----LEEYVLGAGLSLLLQ 180

Query: 181 LLAENDPNRYGTPPASKSAIEKLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKH 240
            LAE+DP+R GTPPA K A+E L T+ +       E+  C+VC+DD   G   KQMPC+H
Sbjct: 181 HLAESDPSRNGTPPAKKEAVEALPTVKI------EEVVSCSVCLDDLEVGSQAKQMPCEH 240

Query: 241 VFHDYCLLPWLELHNSCPICRFELPTDDS 245
            FH  C+LPWLELH+SCP+CRFELP++++
Sbjct: 241 KFHSSCILPWLELHSSCPVCRFELPSEET 248

[Close]
BLAST of CsGy5G013660 vs. Swiss-Prot
Match: sp|O22197|RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.9e-29
Identity = 86/254 (33.86%), Postives = 123/254 (48.43%), Query Frame = 0 

Query: 10  FCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQPFRRFNPLVF 69
           +CH+C RAV +      +P+C  C  GF+EE D + ++  FD         FR    +V 
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQAS-PFD--------MFRSHRGVVE 68

Query: 70  SSSTVVDLQNPGIFSRT-LAPPSQ---------STSSVHHEPYDPFVFLQNHLRSIFESG 129
              T   +    +F R  LA  S          S+   +     P +     +   +   
Sbjct: 69  RDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVP--YRLT 128

Query: 130 ADVVFEIPRHSSHSGVPMPQ-NVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKL 189
            D   E   +    G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L
Sbjct: 129 GDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDAL 188

Query: 190 STITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFE 249
            TI + +  L S  + C VC D+F  G   KQMPC H++H  C++PWL  HNSCP+CR E
Sbjct: 189 PTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQE 247

Query: 250 LP--TDDSDYENRT 251
           LP  +  S  +NRT
Sbjct: 249 LPSASGPSSSQNRT 247

[Close]
BLAST of CsGy5G013660 vs. TrEMBL
Match: tr|A0A0A0KT93|A0A0A0KT93_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G350590 PE=4 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 1.3e-162
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0 

Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60
           MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP
Sbjct: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60

Query: 61  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 120
           FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA
Sbjct: 61  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 120

Query: 121 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 180
           DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST
Sbjct: 121 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 180

Query: 181 ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 240
           ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP
Sbjct: 181 ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 240

Query: 241 TDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFRVPLWWPFGSRNDGSDSE 300
           TDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFRVPLWWPFGSRNDGSDSE
Sbjct: 241 TDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFRVPLWWPFGSRNDGSDSE 299

[Close]
BLAST of CsGy5G013660 vs. TrEMBL
Match: tr|A0A1S3BMB2|A0A1S3BMB2_CUCME (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103491101 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.5e-99
Identity = 183/207 (88.41%), Postives = 187/207 (90.34%), Query Frame = 0 

Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDN--SNSNLNFDPTSFFLP 60
           MS AVDKPFFCHQCDRA+TVSVSISSDPLCPLCHEGFLEEYDN            SFFLP
Sbjct: 1   MSFAVDKPFFCHQCDRAITVSVSISSDPLCPLCHEGFLEEYDNXXXXXXXXXXXRSFFLP 60

Query: 61  QPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFES 120
           QPFRRFNPLVFSSSTVVDLQNPGIFSRTLA P QS+SSVH EPYDPFVFLQNHLRSIFES
Sbjct: 61  QPFRRFNPLVFSSSTVVDLQNPGIFSRTLASPPQSSSSVHPEPYDPFVFLQNHLRSIFES 120

Query: 121 GADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKL 180
           GADVVFEIP HS HSGVPMPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTP ASKSAIEKL
Sbjct: 121 GADVVFEIPCHSFHSGVPMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPSASKSAIEKL 180

Query: 181 STITVTEDLLNSEMNQCAVCIDDFGKG 206
           STITVTEDLLNSEMNQCA+CIDDF KG
Sbjct: 181 STITVTEDLLNSEMNQCAICIDDFEKG 207

[Close]
BLAST of CsGy5G013660 vs. TrEMBL
Match: tr|A0A2C9W2C5|A0A2C9W2C5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G056000 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 8.0e-88
Identity = 179/305 (58.69%), Postives = 217/305 (71.15%), Query Frame = 0 

Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSN---------SNLN-FDP 62
           SAV KP+FC+QC+R VT++VS S+DP CPLCHEGFLEEY+N N          NLN F  
Sbjct: 11  SAVAKPYFCYQCNRTVTITVSASADPFCPLCHEGFLEEYENPNFNSQNPNPIQNLNPFSD 70

Query: 63  TSFFLPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHL 122
            +F  P P     PL+FSSST +D QNP +F       +  T+S   + ++P  FL+NHL
Sbjct: 71  PNFSFPDPISTLLPLLFSSSTTIDFQNPNLFG------NSRTASSDPDAFNPMDFLRNHL 130

Query: 123 RSIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASK 182
           +++   GA + F I  H S     +P N+GDYFIGPGLEQLIQ LAENDPNRYGTPPASK
Sbjct: 131 QNLHSGGARIQFVIENHPSDP--RLPTNIGDYFIGPGLEQLIQQLAENDPNRYGTPPASK 190

Query: 183 SAIEKLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSC 242
           SAI+ L T+ +TE+LLNSEMNQCAVC D+F KG   KQMPCKHV+H  C++PWLE+HNSC
Sbjct: 191 SAIDGLPTVKITEELLNSEMNQCAVCKDEFEKGADAKQMPCKHVYHKDCIVPWLEMHNSC 250

Query: 243 PICRFELPTDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFRVPLWWPFGSR 298
           P+CR+ELPTDD+DYE RTR XXXXXXXXXXXXXXX       R +ERRF + L WPFG +
Sbjct: 251 PVCRYELPTDDADYEIRTRGXXXXXXXXXXXXXXXN------RTLERRFSISLPWPFGRQ 301

[Close]
BLAST of CsGy5G013660 vs. TrEMBL
Match: tr|D7LAT9|D7LAT9_ARALL (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_479513 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 4.8e-85
Identity = 164/303 (54.13%), Postives = 201/303 (66.34%), Query Frame = 0 

Query: 5   VDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD--NSNSNLNFDPTS----FFLP 64
           VDK FFC+QC+R VT+S+S S+DP CP+C++GFLEEY+  N N +LNF+P S    F + 
Sbjct: 17  VDKMFFCYQCNRTVTISISSSADPFCPICNQGFLEEYEDPNPNPSLNFNPNSVDSLFPMA 76

Query: 65  QPFRRFNPLVFSSSTV----VDLQNPGIFSRTLAPPSQST-SSVHHEPYDPFVFLQNHLR 124
            PF    PL+F SS      +DL +   F+ ++ P ++ST  +   + +DPF FLQNHL+
Sbjct: 77  DPFSTLLPLLFGSSAASPSGIDLMSSSFFAPSMQPQARSTQQNPQSDAFDPFTFLQNHLQ 136

Query: 125 SIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKS 184
           ++  SG  V F I  H S  G  MP N GDYF GPGLEQLIQ LAENDPNRYGTPPASKS
Sbjct: 137 NLRSSGTHVQFVIENHPSDLGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKS 196

Query: 185 AIEKLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCP 244
           AI+ L T+ VT+D+L SEMNQCAVC+D+F  G  VKQMPCKHVFH  CLLPWL+LHNSCP
Sbjct: 197 AIDGLPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLQLHNSCP 256

Query: 245 ICRFELPTDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFRVPLWWPFGSRN 297
           +CRFELPTDD DYENRT+                        +   RF + L WPF  R 
Sbjct: 257 VCRFELPTDDPDYENRTQGIQASGDGQGSVEG----------QQTPRFSIQLPWPF-RRQ 308

[Close]
BLAST of CsGy5G013660 vs. TrEMBL
Match: tr|A0A067KMS3|A0A067KMS3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05980 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.4e-84
Identity = 160/304 (52.63%), Postives = 197/304 (64.80%), Query Frame = 0 

Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNL--------NFDPTS 62
           +A  K FFC+QC+R VTV VS SSDP CP+CH+GFLEEY+N N +L            + 
Sbjct: 11  AARTKWFFCYQCNRTVTVPVSASSDPSCPICHDGFLEEYENPNPHLXXXXXXXXXXXDSI 70

Query: 63  FFLPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRS 122
           F  P P     PL+FSS+T +D QNP +   T       T+S   E ++P  FL+NH+++
Sbjct: 71  FSFPDPISTLLPLLFSSTT-IDFQNPNLLGNT------RTASSDPEAFNPMDFLRNHIQN 130

Query: 123 IFESGADVVFEIPRH-SSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKS 182
           +   GA + F I  H S   G  +P N+GDYFIGPGLEQLIQ LAENDPNRYGTPPASKS
Sbjct: 131 LQSGGARIQFVIENHPSDQGGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKS 190

Query: 183 AIEKLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCP 242
           AI+ L T+ +TE++LNSE+NQCAVC D+F KG   KQMPCKHV+H+ C++PWLELHNSCP
Sbjct: 191 AIDALPTVNITEEMLNSELNQCAVCKDEFEKGAEAKQMPCKHVYHNDCIVPWLELHNSCP 250

Query: 243 ICRFELPTDDSDYENRTRXXXXXXXXXXXXXXXXXXXXXXMRRVERRFRVPLWWPFGSRN 298
           +CR+ELPTDDSDYE RTR                       R VERRF + L WPFG   
Sbjct: 251 VCRYELPTDDSDYETRTRVARESQGSNNTEGSVGDN-----RTVERRFSISLPWPFGRHG 302

The following BLAST results are available for this feature:
BLAST of CsGy5G013660 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149872.11.9e-162100.00PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_01165515... [more]
XP_022938450.12.6e-13076.51E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata][more]
XP_023551575.11.7e-12976.51E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo][more]
XP_022993143.13.5e-12778.52E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima][more]
XP_023554317.13.5e-12774.42E3 ubiquitin-protein ligase RING1-like isoform X1 [Cucurbita pepo subsp. pepo] >... [more]
BLAST of CsGy5G013660 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19950.11.4e-8558.59RING/U-box superfamily protein[more]
AT1G55530.14.3e-3935.05RING/U-box superfamily protein[more]
AT5G56340.15.3e-3759.48RING/U-box superfamily protein[more]
AT3G13430.14.9e-3560.75RING/U-box superfamily protein[more]
AT3G56580.21.8e-3234.27RING/U-box superfamily protein[more]
BLAST of CsGy5G013660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8LPN7|RNG1L_ARATH2.5e-8458.59E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
sp|P0CH30|RING1_GOSHI9.7e-8151.12E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV... [more]
sp|Q94AK4|RZF1_ARATH3.2e-3134.27E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV... [more]
sp|Q6AVN2|SIRP1_ORYSJ5.4e-3131.23E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI... [more]
sp|O22197|RHC1A_ARATH3.9e-2933.86Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
BLAST of CsGy5G013660 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KT93|A0A0A0KT93_CUCSA1.3e-162100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G350590 PE=4 SV=1[more]
tr|A0A1S3BMB2|A0A1S3BMB2_CUCME1.5e-9988.41E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103491101 P... [more]
tr|A0A2C9W2C5|A0A2C9W2C5_MANES8.0e-8858.69Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G056000 PE=4 SV=... [more]
tr|D7LAT9|D7LAT9_ARALL4.8e-8554.13Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALY... [more]
tr|A0A067KMS3|A0A067KMS3_JATCU2.4e-8452.63Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05980 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G013660.1CsGy5G013660.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 195..235
e-value: 5.9E-6
score: 35.8
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 193..236
e-value: 1.1E-12
score: 47.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 195..236
score: 12.283
NoneNo IPR availablePFAMPF14369zinc_ribbon_9coord: 9..41
e-value: 1.2E-12
score: 47.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..274
NoneNo IPR availablePANTHERPTHR44679:SF1E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKEcoord: 3..293
NoneNo IPR availablePANTHERPTHR44679FAMILY NOT NAMEDcoord: 3..293
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 174..244
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 158..242
e-value: 2.5E-20
score: 73.9