CSPI05G13810 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G13810
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RING/U-box superfamily protein
Location	Chr5 : 13796683 .. 13802783 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATCTAGAATGTTCTAAATTCGTCGAGAAAGTTCAAGAGCCAATTAAGATTTAGAGTGAAGACTCGAATTCCCATTTCTCAACGGCCAATGGAGTTAACCACCCCTGCATCGAATCCCCCGTTCTTTTCATCTCTTTGAATTTCTCTTTCGTAATTCCTCCTCTTCTCTCCGGATTTCATCGGTTGTTTCCAGGGGCCACCACCACCATGTCCTCCGCCGTCGACAAGCCTTTTTTCTGTCACCAGTGTGATCGCGCGGTTACTGTTTCTGTATCCATTTCCTCCGATCCTCTTTGCCCACTTTGCCACGAGGGTTTTCTCGAAGAGTACGACAATTCCAATTCCAATCTCAATTTTGATCCCACGTCCTTTTTCCTTCCCCAACCTTTCCGTCGTTTCAATCCGCTTGTTTTCTCCTCTTCTACAGTTGTTGATCTTCAAAACCCTGGTATATTTTCAAGAACTTTGGCTCCGCCTTCCCAATCCACTTCCTCTGTTCACCACGAGCCCTACGATCCTTTTGTTTTTCTTCAGAATCATTTACGGAGCATCTTCGAAAGTGGTGCCGATGTTGTCTTTGAAATTCCTCGCCATTCTTCCCACTCTGGTGTTCCAATGCCTCAAAATGTGGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTTATTCAGTTGCTGGCTGAAAATGATCCCAACCGATATGGAACTCCGCCGGCTTCGAAATCGGCAATTGAGAAGCTTTCGACTATCACTGTTACTGAGGACCTTCTGAATTCGCAAATGAATCAGTGTGCCGTTTGCATAGATGATTTTGGAAAAGGTATTGTGGTTAAGCAAATGCCCTGCAAGCATGTATTTCATGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCATGCCCTATTTGCCGGTTCGAGTTGCCTACGGATGATTCTGATTACGAGAATCGAACACGTGAAAACCGGATGCAGGGGAATGAATCTTCCGGGGAAGAATCAGGGTCAGGAAGCAGTGGGAGCAGCATGAGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTGTGGTGGCCGTTTGGTAGCCGGAACGATGGGAGTGACAGTGAATGAGAAGATAGGCCTCAGAACAAACAAATACTGAATATGGTCTGGTAACTTTCATTCTCGTCTATTGTTTCTTTTTGTTTTAGCTTTTGCAAACTGCTTGCCATGCTGTTTTGCCCCCATGTCTTAGATTACTTTCATTGCATACATATGATTATTGAATATGATGCTGAGAGTCCCACACCCACATTGGAAAAACTAAGGAGATTCACACTCCATATCTCCATATTAGATAGATGGGTTATTTGAAATGTCCAAGATAGGTGAACCCAAAGAGTCACCATCTTGAGGAGCATGAAACACTGGTAACTTGTTTGTGAAATGGCTAGCCCCTAAAGAAAAGGTAGAAGGACTAAAAGGAAACATAGGGGAAGAGACGGGAAGAAAATACAATAAGGATTGACAATTGATTCTTTTTTAAGTAATTGTTCAGACAATAACTTTATTTCATGTAAACTCAGTGAGAACAGTTTAAACAATAAATATATAAATATATTGAGTAATATTAAATATATCTCTAGTATGTTTCGATCTCCAGCCTACGTAAAGGGATATCTAATGTTTTTGGTTGTTTGACATGGGATCTTCAATCCTCCAGGGGGAATGGCGAAATAAATGGTTTGTTGTGTTCAGTTTATTAATTTGTAGAAAATGGAAACCTAGTATTATGGTTAGGATGATGGTGCGGCTGTCATTGGTACTAATGGGATTAAATAGTTGATGATCCTGTGGACATCCATCGTAGTAAGAGGAAGAGCTTGCAATCTCTACAGCCACCTCTCTTTTTTATAGGCAACATGAAATTTCGTTGATGATACTCTGAAGAATCAATGGGACGAAGGATCTTCTGAAGATGATTGTAACAAATTTCTTCTTTGGAGTCTTTTTTAAAAGCTTCCTTCTTGATGTTATAAACACAAAAAATTGTTATAGTTATAGTCTTTTGATGATTATAATGACTTGAAGGGCATTCTTTTGTTTGTCCTATAAATAAGAAACTTGACTGTATTGAAGGAGGGGAAAAGAAGACAATACCACTTAAAATGACATCCCTCTCCCAAAGAATGCTAACTGCCGAAAATTCTTCCAATTGCCAGAATCAACAATATTGGATAGCGACCAGAGAATCTGTGGCTTCTCTTGAAGGGGCTTTTCTCTACTGTCGGATTTTTTATTGTTTCATACCAATAAAACAAAAGAAAGTTAGGAAAGGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGCTAGGGTGAGGATCTATCACTAAAGGACCCTTTAGAATCTGATTTAAATGCCCTCTTCCAGATCAAGGAAGTTGTAAATTTTGAAAAGCAGGTCCCTAGAATTCCCTCTCAATCATAGCACTGTGAAGTTCTAGAGCATTTGAAGTCTTTTGTTGAAGAATGTGGAATAACTTTGGGTTGAGTTCTTGAAAGTAGATTTGTTCTCTGCTTCATCAATCAATTATCTCTGAATTTTGAATAGTGGATCACGAGGTTTTTGATGGATACTTCAATAGTTTTGCCATCTACAGCTTCTTGGTCAACCTAATACAGATTTAGTCATTCTTTCAAGTTTTAAAGGTACTTTAGGAGCCACGTTGAACCAAGGTGCTTGTTCAGCCCAGCTCCTCTTTATTTCAGAAGTTGTTTTTGGCAGTTCGGAGCTTTGGTTGTTTGTTTCATCATTTCTTGGCAGGCACGAGAACGGTTTCCTCTTGAAAAGGAATTTAAAGTTATTTTGCAGTTTGTTGGGTTGAAAGTTGTTAGCAAGTCTTCTCGGGCTCAAGATTGTTTCTTGCCTTTCCTTTGTGTTTCCTCTCCATTCCTCTTGAAGATATTACTGTGCAAGTCTTCCCTTTTCTTGGTTTTTCCTCTCCATTCATCTTGAAGCTATTGCTGTGCAAGTTTTCCGCTGAATTTGGGTTTCTTACTGAAAAACACTATTTTGTTCAAGTGCATAAGCTATATATGATTTTTTTTTACTTAGATATGAAGAAAACATTTTCTCAATAGCTTTACGAGTAGCATGTGGCTTTAAAAATACACGTACCTTTTAAATAGATTTTGTGTCTATTTCGAGTTTCTATGGTATATCTATCCAAGTTTTCTTCTAGAAGTTGCTGGCGACTGAGCAGATCTGCAAGAATGAAGGAGGCCTTTCTCTGTCCATGTTTGGTATTCCTGACTACAATTTCTTAACATTTATAGGGTGTAAGAAGGTTGATTTGGGTCAATTCCATAGAACCTTAGTTATTTACCTATACTTGGGGAGAGGAAGAGGTGAATGTAAATGTGGAATGCTGTGTAGGGACATGCAACAGTTATGGTGTGGGATTTAGCAAATAAGTGAGTTTTATCTATGTATATGCTGGCCGTGTAGCGAGGCATTTTTCTGGTTAGGATATGATCAGGGTCTGCAAATCATTGCTAGACCCAAAAGCTAAGTCTTAGTTGGGGTAAAGCTAAGCTGATGAGTTATGATAAACTTAATTTTATCAATGCTTTTGACTCATTCCTCGATTTGTGGATGCGAAAATTTGTAGAAGGTTAATTGGCCAACAAGAGTACATCAATATAAACTAGATGAGGAATGGTGTTTAGGCCTCAAACAAAATTAAATAGATGGATTGCGCTAAATTTAATTATATCAACATTTATCAAATTCTCCTATGATCTTGTAATTCTCTGCCACGGATAAGAATTGTTGTATGTCAGATTGTTTCCTATCAAACTTTCCTTTGTCATCAATAAAGTTAGCAATATCACATTTTTAGATCTGCTCTAGATGAAACAAACAAAGAGGATACTTCAAACTAACTAAAATGAAATGATATGATCAGTTTATGGAGTTATTGGATTTTTATTTATCTTATTCCTTACGTTTTAGTTTCAACTTGCACTCACACCCAATTCCCAATCTCAAGTGGGGCGTTTGGGCCTTATAGTTATGGCCAGTTCACTTTTGAAAGAAAAAAATATTTTCTTGGGGGACATTTATGTGTTTTTTACCCTAAACCTTAAAGAAAAGAAAAATAAAATGAAACAAATCATTTATGTACTTGGCTCACACTTGAGGTGATTTATGTACGTTTGGGCTAATACTCTCCTTGGAGCAGTAATCGACCATTCATCTACTATTTATGTTCACTCAACTTTTGAAGTGATTTAATTGACCTATGGATCTGAATATATAAATCCTTGAGAGAAGGAGATAAAGGATAGGATTATGCTAGTATTATATGAGGTTCCACTTTATTACCTTTGAACTACTTTCCTTGATCAAACTCCAAAAAGCATGGACAAGAAGGGCATACCCTTTACAGGTCACATTTTATTTCTTTAAAACTAAGATGATATTTATTATTAATTATGCCGTGGACATTTAGAACACATCATGAAAAAGAGATGGGTTGTTGTTAATATATGTCTAGATACTAGTATCGTGACTGAAATTTTGATGACCGTCCAAAATAGAAATTTCTAGGGTAGTTAATCTTTAAGGAAAGAAAGTTTTTTTTTTATTATTATTATTTTTTACTTTTTTTTGGGAATGATCTTTAAGGGAAGGAAATTAAAAAATTATTTATGTTAAACCCTTTATTATGAACAGATGAAGCTAAGATTTTGGCCCATGTATCCAGAATAAAAAAAATTGTGCTTTAAAACTAAAAAATCTCGATGTCCAATATATATCTGTTGTACATGTACTATCCAGACATGTGCAATGCATACATAATTGGGAGATTGTGCTGCGTTTTGGACTAATTTGTGTATATATTTCTTGGACATGCATCAATCATTTCCTTTTTTATTTGACAATTTTGGATATGAAAAACCTTCTTAACATGAAGGTGATATGATTTTTTTTACCCTCCCTTGAGGGTTAATGGGCGACAGATTCGGGTTCTAAATGCATCCATTATTAATTATTAGTTGTATATCCTGAAGTGTGTATCCAAGAGTGTATTAGAAGACATTTGACACATAGGTTAGGTTTATGTAACTTAAGGTTCAGAGCTTCTGTACTTGTATCTGTATTTGGTATATAACACTTGCCATATTTCTATGTTTTAGTCATACAAGCCTTATGAAATGCACCTTTTACATTGTAGAATAATTGAACTGTAGTGATAGGACTTGAGATTTTCCCCATGGGGAAAGATGTATATAAACTTGTTCTAGATTACAGATTTTGAGATGAATAGTTATATTCTAATACGACTCTATAATGATTGAAATTTAGATTTTCTTTAGGTAATCTCTATACCTCGGTCCTCGATTGAGATGTACATTAGGCTTTTGAAAAGCATCTTTTAATCTTCATCTTCTTAATTTTGCTTTGTACTGTTGTCAACAATCATGCATGGCTTTAGGTTTATTGTGTGGAGGTTATACATAAATGATATGAACACTCAGCTCGGTAGCCATGATTGGCATTGTAATGCAATATGAAGGGCCAATGTAAATCCTTACCATAGCTTAAATTTTGTTTTTCAGGCAAACGGAGCACTGTTTTGACCTTAAGGTTGTCTCACATTTTTAGAAGAAATTTCTGCTGTAATACCTTTGCAAAGTCGGTGTCTTTTGGTAGCCTTTCGTTTGTTAGTTATTCATTTTTTTTCCTTTCACATTAGAATTTTGTTTCACATGCCAACATCAATTATGTACAGATGTGTTCATTTTGAGTGTCATTTCTTCTTTCAATGTAGAATGTAATACATTCCAAATCATCTCTTGTTCATAGCTGCTACGAAAGGCTGCTTCTTCTTTTCAAATTTGTGTCTATTGGTGGTTATTAGGGAGTATGCAAATTTTCGTATGTAGTAGCGTGGTTTAAATTTGTATATAAACAAAACATATTTGTTAAATATCTCTTTAGGATGGAGGGTG

mRNA sequence

ATGTCCTCCGCCGTCGACAAGCCTTTTTTCTGTCACCAGTGTGATCGCGCGGTTACTGTTTCTGTATCCATTTCCTCCGATCCTCTTTGCCCACTTTGCCACGAGGGTTTTCTCGAAGAGTACGACAATTCCAATTCCAATCTCAATTTTGATCCCACGTCCTTTTTCCTTCCCCAACCTTTCCGTCGTTTCAATCCGCTTGTTTTCTCCTCTTCTACAGTTGTTGATCTTCAAAACCCTGGTATATTTTCAAGAACTTTGGCTCCGCCTTCCCAATCCACTTCCTCTGTTCACCACGAGCCCTACGATCCTTTTGTTTTTCTTCAGAATCATTTACGGAGCATCTTCGAAAGTGGTGCCGATGTTGTCTTTGAAATTCCTCGCCATTCTTCCCACTCTGGTGTTCCAATGCCTCAAAATGTGGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTTATTCAGTTGCTGGCTGAAAATGATCCCAACCGATATGGAACTCCGCCGGCTTCGAAATCGGCAATTGAGAAGCTTTCGACTATCACTGTTACTGAGGACCTTCTGAATTCGCAAATGAATCAGTGTGCCGTTTGCATAGATGATTTTGGAAAAGGTATTGTGGTTAAGCAAATGCCCTGCAAGCATGTATTTCATGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCATGCCCTATTTGCCGGTTCGAGTTGCCTACGGATGATTCTGATTACGAGAATCGAACACGTGAAAACCGGATGCAGGGGAATGAATCTTCCGGGGAAGAATCAGGGTCAGGAAGCAGTGGGAGCAGCATGAGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTGTGGTGGCCGTTTGGTAGCCGGAACGATGGGAGTGACAGTGAATGA

Coding sequence (CDS)

ATGTCCTCCGCCGTCGACAAGCCTTTTTTCTGTCACCAGTGTGATCGCGCGGTTACTGTTTCTGTATCCATTTCCTCCGATCCTCTTTGCCCACTTTGCCACGAGGGTTTTCTCGAAGAGTACGACAATTCCAATTCCAATCTCAATTTTGATCCCACGTCCTTTTTCCTTCCCCAACCTTTCCGTCGTTTCAATCCGCTTGTTTTCTCCTCTTCTACAGTTGTTGATCTTCAAAACCCTGGTATATTTTCAAGAACTTTGGCTCCGCCTTCCCAATCCACTTCCTCTGTTCACCACGAGCCCTACGATCCTTTTGTTTTTCTTCAGAATCATTTACGGAGCATCTTCGAAAGTGGTGCCGATGTTGTCTTTGAAATTCCTCGCCATTCTTCCCACTCTGGTGTTCCAATGCCTCAAAATGTGGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTTATTCAGTTGCTGGCTGAAAATGATCCCAACCGATATGGAACTCCGCCGGCTTCGAAATCGGCAATTGAGAAGCTTTCGACTATCACTGTTACTGAGGACCTTCTGAATTCGCAAATGAATCAGTGTGCCGTTTGCATAGATGATTTTGGAAAAGGTATTGTGGTTAAGCAAATGCCCTGCAAGCATGTATTTCATGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCATGCCCTATTTGCCGGTTCGAGTTGCCTACGGATGATTCTGATTACGAGAATCGAACACGTGAAAACCGGATGCAGGGGAATGAATCTTCCGGGGAAGAATCAGGGTCAGGAAGCAGTGGGAGCAGCATGAGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTGTGGTGGCCGTTTGGTAGCCGGAACGATGGGAGTGACAGTGAATGA

Homology

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BLAST of CSPI05G13810 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 8.1e-88
Identity = 166/303 (54.79%), Postives = 206/303 (67.99%), Query Frame = 1


Query: 5   VDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD--NSNSNLNFDPTS----FFLP 64
           VDK FFC+QC++ VT+S+S S+DP CP+C++GFLEEY+  N N +LNF+P S    F + 
Sbjct: 17  VDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMA 76

Query: 65  QPFRRFNPLVFSSSTVVD--LQNPGIFSRTLAPPSQSTS-SVHHEPYDPFVFLQNHLRSI 124
            PF    PL+F SS      +    +F  ++ P ++ST  +   + +DPF FLQNHL+++
Sbjct: 77  DPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTL 136

Query: 125 FESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAI 184
             SG    F I  H S  G  MP N GDYF GPGLEQLIQ LAENDPNRYGTPPASKSAI
Sbjct: 137 RSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI 196

Query: 185 EKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPIC 244
           + L T+ VT+D+L S+MNQCAVC+D+F  G  VKQMPCKHVFH  CLLPWLELHNSCP+C
Sbjct: 197 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 256

Query: 245 RFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDG 299
           RFELPTDD DYENR+     QG++ SG+  GS     +      RF + L WPF  R DG
Sbjct: 257 RFELPTDDPDYENRS-----QGSQGSGDGQGSVEGQQT-----PRFSIQLPWPF-RRQDG 308

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BLAST of CSPI05G13810 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.4e-85
Identity = 166/313 (53.04%), Postives = 200/313 (63.90%), Query Frame = 1


Query: 6   DKPFFCHQCDRAVTVSVSI-SSDPLCPLCHEGFLEEYDNSNSN-----LNFDPTSF---- 65
           +KPFFC+QC+R V V++S  SSDP CP+C+EGFLEEYDN N N     LN +P S     
Sbjct: 20  NKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHD 79

Query: 66  ---FLPQPFRRFNPLVF--------SSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPY-- 125
               L  PF    PL+F        SSS  +D  NP +        S  T S   +P+  
Sbjct: 80  LFLTLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSL--------SGPTRSGRGDPFAF 139

Query: 126 DPFVFLQNHLRSIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDP 185
           DPF F+QNHL  +  SGA + F I  + S  G  +P N+GDYFIGPGLEQLIQ LAENDP
Sbjct: 140 DPFTFIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDP 199

Query: 186 NRYGTPPASKSAIEKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCL 245
           NRYGTPPASKSAIE L  + +T+  LNS+ NQCAVC+DDF +G   KQMPCKH++H  CL
Sbjct: 200 NRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCL 259

Query: 246 LPWLELHNSCPICRFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFR 296
           LPWLELHNSCP+CR ELPTDD DYE R R  +     + G+ SG  S G + R VER FR
Sbjct: 260 LPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDN-RTVERSFR 319

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BLAST of CSPI05G13810 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.3e-33
Identity = 101/302 (33.44%), Postives = 142/302 (47.02%), Query Frame = 1


Query: 10  FCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQPFRRFNPLVF 69
           +CH+C RAV +      +P+C  C  GF+EE D + ++  FD         FR    +V 
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQAS-PFDM--------FRSHRGVVE 68

Query: 70  SSSTVVDLQNPGIFSRT-LAPPSQ---------STSSVHHEPYDPFVFLQNHLRSIFESG 129
              T   +    +F R  LA  S          S+   +     P +     +   +   
Sbjct: 69  RDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVP--YRLT 128

Query: 130 ADVVFEIPRHSSHSGVPMPQ-NVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKL 189
            D   E   +    G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L
Sbjct: 129 GDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDAL 188

Query: 190 STITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFE 249
            TI + +  L S  + C VC D+F  G   KQMPC H++H  C++PWL  HNSCP+CR E
Sbjct: 189 PTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQE 248

Query: 250 LP--TDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGS 299
           LP  +  S  +NRT   R   + SS   S S  +G+     ERR     +WPF S    S
Sbjct: 249 LPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN-----ERRNPFSSFWPFRSSGSSS 290

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BLAST of CSPI05G13810 vs. Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.1e-27
Identity = 83/258 (32.17%), Postives = 128/258 (49.61%), Query Frame = 1


Query: 9   FFCHQCDRAVTV--SVSISSDPLCPLCHEGFLEEY-DNSNSNLNFDPTSFFLPQPF---- 68
           ++C+ C R ++V      ++  LCP C+ GF+EE  D+SNS +   P S    +      
Sbjct: 31  YWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPASTPEVRSVEETH 90

Query: 69  -----RRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIF 128
                RR +    S + V+ L   G           +   V +E  D     +      +
Sbjct: 91  RSIIRRRRSNRRTSFNPVIVLHGGG--------GGGAGERVENEEGDGATRERRAYEFYY 150

Query: 129 ESGADVVFEIPRHSSHSGV-PMPQNVGDYFIGPGLEQLIQLLAE-----NDPNRYGTPPA 188
           + G           S SG+ P+P +V +  +G G E+L++ L++     N   R G PPA
Sbjct: 151 DDG-----------SGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPA 210

Query: 189 SKSAIEKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHN 248
           SKSAIE L  + +++    ++ N CAVC + F  GI  ++MPCKH+FH  C++PWL + N
Sbjct: 211 SKSAIESLPRVEISDCHTKAEAN-CAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRN 268

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BLAST of CSPI05G13810 vs. Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.0e-27
Identity = 83/273 (30.40%), Postives = 136/273 (49.82%), Query Frame = 1


Query: 2   SSAVDKPFFCHQCDRAVTV----SVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFL 61
           ++ +   ++C+ C R V+V      +      CP C  GF+E+ ++S+S      T   +
Sbjct: 11  TTPITASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSAA----TELTI 70

Query: 62  PQPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHL--RSI 121
           P           +S+ V  + N     R++    +   S     ++P + LQ     R  
Sbjct: 71  P-----------ASTEVRSINNN---RRSVI---RRRRSGRRPSFNPVIVLQGGAGEREE 130

Query: 122 FESGADV----VFEIPRHS-SHSGV-PMPQNVGDYFIGPGLEQLIQLLAENDPN-----R 181
            E G        FE      S SG+ P+P +V +  +G G E+L++ L++ + +     R
Sbjct: 131 GEEGDAARDRRAFEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGR 190

Query: 182 YGTPPASKSAIEKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLP 241
            G PPASKSAIE L  + +++  + S+ N CAVC + F      ++MPCKH+FHD C++P
Sbjct: 191 SGNPPASKSAIESLPRVEISDCHIGSEAN-CAVCTEIFETETEAREMPCKHLFHDDCIVP 250

Query: 242 WLELHNSCPICRFELPTDDSDYENRTRENRMQG 258
           WL + NSCP+CRFELP++ +   N   E+   G
Sbjct: 251 WLSIRNSCPVCRFELPSEPNRRSNNNEEDNAVG 261

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BLAST of CSPI05G13810 vs. TrEMBL
Match: A0A0A0KT93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G350590 PE=4 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 1.6e-175
Identity = 297/299 (99.33%), Postives = 298/299 (99.67%), Query Frame = 1


Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60
           MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP
Sbjct: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60

Query: 61  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 120
           FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA
Sbjct: 61  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 120

Query: 121 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 180
           DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST
Sbjct: 121 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 180

Query: 181 ITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 240
           ITVTEDLLNS+MNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP
Sbjct: 181 ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 240

Query: 241 TDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE 300
           TDDSDYENRTR NRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE
Sbjct: 241 TDDSDYENRTRGNRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE 299

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BLAST of CSPI05G13810 vs. TrEMBL
Match: A0A067KMS3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05980 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 3.0e-89
Identity = 168/304 (55.26%), Postives = 209/304 (68.75%), Query Frame = 1


Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLN--------FDPTS 62
           +A  K FFC+QC+R VTV VS SSDP CP+CH+GFLEEY+N N +LN        F+ + 
Sbjct: 11  AARTKWFFCYQCNRTVTVPVSASSDPSCPICHDGFLEEYENPNPHLNSQNPNPNNFNDSI 70

Query: 63  FFLPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRS 122
           F  P P     PL+FSS+T+ D QNP +   T       T+S   E ++P  FL+NH+++
Sbjct: 71  FSFPDPISTLLPLLFSSTTI-DFQNPNLLGNT------RTASSDPEAFNPMDFLRNHIQN 130

Query: 123 IFESGADVVFEIPRH-SSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKS 182
           +   GA + F I  H S   G  +P N+GDYFIGPGLEQLIQ LAENDPNRYGTPPASKS
Sbjct: 131 LQSGGARIQFVIENHPSDQGGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKS 190

Query: 183 AIEKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCP 242
           AI+ L T+ +TE++LNS++NQCAVC D+F KG   KQMPCKHV+H+ C++PWLELHNSCP
Sbjct: 191 AIDALPTVNITEEMLNSELNQCAVCKDEFEKGAEAKQMPCKHVYHNDCIVPWLELHNSCP 250

Query: 243 ICRFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRN 298
           +CR+ELPTDDSDYE RTR  R    ES G  +  GS G + R VERRF + L WPFG   
Sbjct: 251 VCRYELPTDDSDYETRTRVAR----ESQGSNNTEGSVGDN-RTVERRFSISLPWPFGRHG 302

[Close]

BLAST of CSPI05G13810 vs. TrEMBL
Match: D7LAT9_ARALL (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479513 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.3e-87
Identity = 170/305 (55.74%), Postives = 210/305 (68.85%), Query Frame = 1


Query: 5   VDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSN--LNFDPTS----FFLP 64
           VDK FFC+QC+R VT+S+S S+DP CP+C++GFLEEY++ N N  LNF+P S    F + 
Sbjct: 17  VDKMFFCYQCNRTVTISISSSADPFCPICNQGFLEEYEDPNPNPSLNFNPNSVDSLFPMA 76

Query: 65  QPFRRFNPLVFSSSTV----VDLQNPGIFSRTLAPPSQSTS-SVHHEPYDPFVFLQNHLR 124
            PF    PL+F SS      +DL +   F+ ++ P ++ST  +   + +DPF FLQNHL+
Sbjct: 77  DPFSTLLPLLFGSSAASPSGIDLMSSSFFAPSMQPQARSTQQNPQSDAFDPFTFLQNHLQ 136

Query: 125 SIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKS 184
           ++  SG  V F I  H S  G  MP N GDYF GPGLEQLIQ LAENDPNRYGTPPASKS
Sbjct: 137 NLRSSGTHVQFVIENHPSDLGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKS 196

Query: 185 AIEKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCP 244
           AI+ L T+ VT+D+L S+MNQCAVC+D+F  G  VKQMPCKHVFH  CLLPWL+LHNSCP
Sbjct: 197 AIDGLPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLQLHNSCP 256

Query: 245 ICRFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRN 299
           +CRFELPTDD DYENRT     QG ++SG+  GS     +      RF + L WPF  R 
Sbjct: 257 VCRFELPTDDPDYENRT-----QGIQASGDGQGSVEGQQT-----PRFSIQLPWPF-RRQ 310

[Close]

BLAST of CSPI05G13810 vs. TrEMBL
Match: R0G651_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10014036mg PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 6.9e-86
Identity = 165/309 (53.40%), Postives = 209/309 (67.64%), Query Frame = 1


Query: 2   SSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNS------NSNLNFDPTSF 61
           S+A DK FFC+QC+R VT+S+S S+DP CP+C++GFLEEY++       N NLN D + F
Sbjct: 40  SAAADKMFFCYQCNRTVTISISSSADPFCPICNQGFLEEYEDRSPNLPPNFNLNSDDSFF 99

Query: 62  FLPQPFRRFNPLVFSSSTV----VDLQNPGIFSRTLAPPSQSTSSV-HHEPYDPFVFLQN 121
            +  PF    PL+F SS      +D  +   F  ++ P ++ST  +   + +DP  FLQN
Sbjct: 100 PMADPFSTLLPLLFGSSAASPSGMDFMSSSFFGPSMQPQARSTQQIPQSDAFDPVSFLQN 159

Query: 122 HLRSIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPA 181
           HL+ +  SG  V F I  H S +   MP N+GDYF GPGLEQLIQ LAENDPNRYGTPPA
Sbjct: 160 HLQHLRSSGTHVQFVIENHPSDAAHRMPGNLGDYFFGPGLEQLIQQLAENDPNRYGTPPA 219

Query: 182 SKSAIEKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHN 241
           SKSAI+ L T+ VT+D+L S+MNQCAVC+D+F  G  VKQMPCKHVFH  CLLPWL+LHN
Sbjct: 220 SKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLQLHN 279

Query: 242 SCPICRFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFG 300
           SCP+CRFEL TDD DYE+R      QG ++SG+  GS    S  ++  RRF + L WPF 
Sbjct: 280 SCPVCRFELSTDDPDYEHRA-----QGIQASGDGQGS----SEGQQTPRRFSIQLPWPF- 338

[Close]

BLAST of CSPI05G13810 vs. TrEMBL
Match: A0A061E403_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_007702 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.6e-85
Identity = 166/321 (51.71%), Postives = 205/321 (63.86%), Query Frame = 1


Query: 7   KPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNL---------NFDPTS--- 66
           KPFFC+QC+R V V++S SSDP CP+C+EGFLEEY+N N N          N +P S   
Sbjct: 19  KPFFCYQCNRTVNVTISPSSDPSCPICNEGFLEEYENPNPNQGSAFQSPNPNLNPFSEPY 78

Query: 67  FFLPQPFRRFNPLVFSSSTV-----------VDLQNPGIFSRTLAPPSQSTSSVHHEPY- 126
             L  PF    PL+F SS+            +D+ NP +F         ST S   +P+ 
Sbjct: 79  LSLSDPFSSLLPLLFPSSSSSTTTSSSSPASIDVHNPSLFG--------STRSARGDPFA 138

Query: 127 -DPFVFLQNHLRSIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAEND 186
            DPF F+QNHL  +  SGA + F I  + S  G  +P N+GDYFIGPGLEQLIQ LAEND
Sbjct: 139 FDPFAFIQNHLNDLRSSGAHIEFVIQNNPSEPGFRLPANIGDYFIGPGLEQLIQQLAEND 198

Query: 187 PNRYGTPPASKSAIEKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYC 246
           PNRYGTPPASKSAI+ L ++ +T++ LNS+ NQCAVC+D+F +G   KQMPCKH++H  C
Sbjct: 199 PNRYGTPPASKSAIDSLPSVKITKNHLNSEFNQCAVCMDEFEEGTQAKQMPCKHLYHKDC 258

Query: 247 LLPWLELHNSCPICRFELPTDDSDYENRTRENRMQGNESSGEESGSGSSG----SSMRRV 299
           +LPWLELHNSCP+CR ELPTDD DYE R R  +  G  + GE SG G SG       R V
Sbjct: 259 ILPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTGGGNDGEGSGGGDSGQRSAGDNRTV 318

[Close]

BLAST of CSPI05G13810 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 325.1 bits (832), Expect = 4.6e-89
Identity = 166/303 (54.79%), Postives = 206/303 (67.99%), Query Frame = 1


Query: 5   VDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYD--NSNSNLNFDPTS----FFLP 64
           VDK FFC+QC++ VT+S+S S+DP CP+C++GFLEEY+  N N +LNF+P S    F + 
Sbjct: 17  VDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMA 76

Query: 65  QPFRRFNPLVFSSSTVVD--LQNPGIFSRTLAPPSQSTS-SVHHEPYDPFVFLQNHLRSI 124
            PF    PL+F SS      +    +F  ++ P ++ST  +   + +DPF FLQNHL+++
Sbjct: 77  DPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTL 136

Query: 125 FESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAI 184
             SG    F I  H S  G  MP N GDYF GPGLEQLIQ LAENDPNRYGTPPASKSAI
Sbjct: 137 RSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI 196

Query: 185 EKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPIC 244
           + L T+ VT+D+L S+MNQCAVC+D+F  G  VKQMPCKHVFH  CLLPWLELHNSCP+C
Sbjct: 197 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 256

Query: 245 RFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDG 299
           RFELPTDD DYENR+     QG++ SG+  GS     +      RF + L WPF  R DG
Sbjct: 257 RFELPTDDPDYENRS-----QGSQGSGDGQGSVEGQQT-----PRFSIQLPWPF-RRQDG 308

[Close]

BLAST of CSPI05G13810 vs. TAIR10
Match: AT5G56340.1 (AT5G56340.1 RING/U-box superfamily protein)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-37
Identity = 85/175 (48.57%), Postives = 104/175 (59.43%), Query Frame = 1


Query: 136 PMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLSTITVTEDLLNSQMNQC 195
           P   ++GDYFIGPGL+ L+Q LAENDPNR GTPPA K A+E L T+ + E L      QC
Sbjct: 206 PSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL------QC 265

Query: 196 AVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELPTD---------DSDY 255
           +VC+DDF KG   K+MPCKH FH  C++PWLELH+SCP+CRFELP+          DS+ 
Sbjct: 266 SVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKTDSER 325

Query: 256 ENRTRENRMQGNESSGEESGSGSSG--SSMRRVE-RRFRVPLWWPFGSRNDGSDS 299
             RTR  R   N +  E  G+   G    +R    RRF  P  WPF      S S
Sbjct: 326 VLRTRNVRETSNGNVVENVGNADRGREDEVRSGNGRRFSFP--WPFSGLFSSSSS 372

[Close]

BLAST of CSPI05G13810 vs. TAIR10
Match: AT1G55530.1 (AT1G55530.1 RING/U-box superfamily protein)

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36
Identity = 70/137 (51.09%), Postives = 92/137 (67.15%), Query Frame = 1


Query: 140 NVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLSTITVTEDLLNSQMNQCAVCI 199
           ++GDYFIGPG E L+Q LAENDPNRYGTPPA K A+E L+T+ + E L      QC+VC+
Sbjct: 174 SLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL------QCSVCL 233

Query: 200 DDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELPTDDSDYENRTRENRMQGNE 259
           DDF  G   K MPC H FH  CLLPWLELH+SCP+CR++LP D++  ++ T  +   G+ 
Sbjct: 234 DDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSVTTTSDNNGSS 293

Query: 260 SSGEESGSGSSGSSMRR 277
           S+   +  G+  S   R
Sbjct: 294 SASATTSHGAENSDGNR 304

[Close]

BLAST of CSPI05G13810 vs. TAIR10
Match: AT3G13430.1 (AT3G13430.1 RING/U-box superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-34
Identity = 72/136 (52.94%), Postives = 91/136 (66.91%), Query Frame = 1


Query: 140 NVGDYFIGPGLEQLIQLLAEND-PNRYGTPPASKSAIEKLSTITVTEDLLNSQMNQCAVC 199
           ++GDYFIGPG E L+Q LAEND  NRYGTPPA+K A+E L+ + + + LL     QC+VC
Sbjct: 174 SLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLL-----QCSVC 233

Query: 200 IDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELPTDDSDYENRTRE-NRMQG 259
           +DDF  G+  K+MPCKH FH  CLLPWLELH+SCP+CR+ LPT D D      E +R   
Sbjct: 234 LDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDDEPKTDAETSRNDD 293

Query: 260 NESSGEESGSGSSGSS 274
           N      +   S+GSS
Sbjct: 294 NNEDISNASMASNGSS 304

[Close]

BLAST of CSPI05G13810 vs. TAIR10
Match: AT2G40830.2 (AT2G40830.2 RING-H2 finger C1A)

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-34
Identity = 101/302 (33.44%), Postives = 142/302 (47.02%), Query Frame = 1


Query: 10  FCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQPFRRFNPLVF 69
           +CH+C RAV +      +P+C  C  GF+EE D + ++  FD         FR    +V 
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQAS-PFDM--------FRSHRGVVE 68

Query: 70  SSSTVVDLQNPGIFSRT-LAPPSQ---------STSSVHHEPYDPFVFLQNHLRSIFESG 129
              T   +    +F R  LA  S          S+   +     P +     +   +   
Sbjct: 69  RDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVP--YRLT 128

Query: 130 ADVVFEIPRHSSHSGVPMPQ-NVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKL 189
            D   E   +    G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L
Sbjct: 129 GDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDAL 188

Query: 190 STITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFE 249
            TI + +  L S  + C VC D+F  G   KQMPC H++H  C++PWL  HNSCP+CR E
Sbjct: 189 PTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQE 248

Query: 250 LP--TDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGS 299
           LP  +  S  +NRT   R   + SS   S S  +G+     ERR     +WPF S    S
Sbjct: 249 LPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN-----ERRNPFSSFWPFRSSGSSS 290

[Close]

BLAST of CSPI05G13810 vs. NCBI nr
Match: gi|449464310|ref|XP_004149872.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 623.2 bits (1606), Expect = 2.3e-175
Identity = 297/299 (99.33%), Postives = 298/299 (99.67%), Query Frame = 1


Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60
           MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP
Sbjct: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLNFDPTSFFLPQP 60

Query: 61  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 120
           FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA
Sbjct: 61  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 120

Query: 121 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 180
           DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST
Sbjct: 121 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 180

Query: 181 ITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 240
           ITVTEDLLNS+MNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP
Sbjct: 181 ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 240

Query: 241 TDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE 300
           TDDSDYENRTR NRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE
Sbjct: 241 TDDSDYENRTRGNRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDSE 299

[Close]

BLAST of CSPI05G13810 vs. NCBI nr
Match: gi|659096543|ref|XP_008449154.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 386.7 bits (992), Expect = 3.6e-104
Identity = 189/207 (91.30%), Postives = 194/207 (93.72%), Query Frame = 1


Query: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSN--LNFDPTSFFLP 60
           MS AVDKPFFCHQCDRA+TVSVSISSDPLCPLCHEGFLEEYDNSNSN  LN D  SFFLP
Sbjct: 1   MSFAVDKPFFCHQCDRAITVSVSISSDPLCPLCHEGFLEEYDNSNSNSNLNLDLRSFFLP 60

Query: 61  QPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFES 120
           QPFRRFNPLVFSSSTVVDLQNPGIFSRTLA P QS+SSVH EPYDPFVFLQNHLRSIFES
Sbjct: 61  QPFRRFNPLVFSSSTVVDLQNPGIFSRTLASPPQSSSSVHPEPYDPFVFLQNHLRSIFES 120

Query: 121 GADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKL 180
           GADVVFEIP HS HSGVPMPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTP ASKSAIEKL
Sbjct: 121 GADVVFEIPCHSFHSGVPMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPSASKSAIEKL 180

Query: 181 STITVTEDLLNSQMNQCAVCIDDFGKG 206
           STITVTEDLLNS+MNQCA+CIDDF KG
Sbjct: 181 STITVTEDLLNSEMNQCAICIDDFEKG 207

[Close]

BLAST of CSPI05G13810 vs. NCBI nr
Match: gi|802600248|ref|XP_012072845.1| (PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas])

HSP 1 Score: 336.7 bits (862), Expect = 4.3e-89
Identity = 168/304 (55.26%), Postives = 209/304 (68.75%), Query Frame = 1


Query: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNLN--------FDPTS 62
           +A  K FFC+QC+R VTV VS SSDP CP+CH+GFLEEY+N N +LN        F+ + 
Sbjct: 11  AARTKWFFCYQCNRTVTVPVSASSDPSCPICHDGFLEEYENPNPHLNSQNPNPNNFNDSI 70

Query: 63  FFLPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRS 122
           F  P P     PL+FSS+T+ D QNP +   T       T+S   E ++P  FL+NH+++
Sbjct: 71  FSFPDPISTLLPLLFSSTTI-DFQNPNLLGNT------RTASSDPEAFNPMDFLRNHIQN 130

Query: 123 IFESGADVVFEIPRH-SSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKS 182
           +   GA + F I  H S   G  +P N+GDYFIGPGLEQLIQ LAENDPNRYGTPPASKS
Sbjct: 131 LQSGGARIQFVIENHPSDQGGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKS 190

Query: 183 AIEKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCP 242
           AI+ L T+ +TE++LNS++NQCAVC D+F KG   KQMPCKHV+H+ C++PWLELHNSCP
Sbjct: 191 AIDALPTVNITEEMLNSELNQCAVCKDEFEKGAEAKQMPCKHVYHNDCIVPWLELHNSCP 250

Query: 243 ICRFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRN 298
           +CR+ELPTDDSDYE RTR  R    ES G  +  GS G + R VERRF + L WPFG   
Sbjct: 251 VCRYELPTDDSDYETRTRVAR----ESQGSNNTEGSVGDN-RTVERRFSISLPWPFGRHG 302

[Close]

BLAST of CSPI05G13810 vs. NCBI nr
Match: gi|297830662|ref|XP_002883213.1| (zinc finger family protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 331.3 bits (848), Expect = 1.8e-87
Identity = 170/305 (55.74%), Postives = 210/305 (68.85%), Query Frame = 1


Query: 5   VDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSN--LNFDPTS----FFLP 64
           VDK FFC+QC+R VT+S+S S+DP CP+C++GFLEEY++ N N  LNF+P S    F + 
Sbjct: 17  VDKMFFCYQCNRTVTISISSSADPFCPICNQGFLEEYEDPNPNPSLNFNPNSVDSLFPMA 76

Query: 65  QPFRRFNPLVFSSSTV----VDLQNPGIFSRTLAPPSQSTS-SVHHEPYDPFVFLQNHLR 124
            PF    PL+F SS      +DL +   F+ ++ P ++ST  +   + +DPF FLQNHL+
Sbjct: 77  DPFSTLLPLLFGSSAASPSGIDLMSSSFFAPSMQPQARSTQQNPQSDAFDPFTFLQNHLQ 136

Query: 125 SIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKS 184
           ++  SG  V F I  H S  G  MP N GDYF GPGLEQLIQ LAENDPNRYGTPPASKS
Sbjct: 137 NLRSSGTHVQFVIENHPSDLGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKS 196

Query: 185 AIEKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCP 244
           AI+ L T+ VT+D+L S+MNQCAVC+D+F  G  VKQMPCKHVFH  CLLPWL+LHNSCP
Sbjct: 197 AIDGLPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLQLHNSCP 256

Query: 245 ICRFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRN 299
           +CRFELPTDD DYENRT     QG ++SG+  GS     +      RF + L WPF  R 
Sbjct: 257 VCRFELPTDDPDYENRT-----QGIQASGDGQGSVEGQQT-----PRFSIQLPWPF-RRQ 310

[Close]

BLAST of CSPI05G13810 vs. NCBI nr
Match: gi|729346272|ref|XP_010541863.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X2 [Tarenaya hassleriana])

HSP 1 Score: 325.9 bits (834), Expect = 7.6e-86
Identity = 167/307 (54.40%), Postives = 209/307 (68.08%), Query Frame = 1


Query: 2   SSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSNL--NFDPTSFF-LP 61
           +SA DK FFC+QC+R VTVS+S S+DP CPLC++GFLEEY++ N N   N +P+  F   
Sbjct: 10  TSAADKLFFCYQCNRTVTVSISSSTDPFCPLCNDGFLEEYEDPNPNPSPNLNPSGVFPFS 69

Query: 62  QPFRRFNPLVFS-----SSTVVDLQNPGIFSRTLAPPSQSTSSVHHEP--YDPFVFLQNH 121
            P     P++F+     SS V+D  NP IF + +  P +ST     +P  +DP  FLQNH
Sbjct: 70  DPLSSLLPILFAPSASPSSNVIDFFNPSIFGQPM--PGRSTQP---DPIAFDPVTFLQNH 129

Query: 122 LRSIFESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPAS 181
           L+S+  SG  V F I  H S     +P N+GDYF GPGLEQLIQ LAENDPNRYGTPPAS
Sbjct: 130 LQSLRSSGTHVQFVIENHPSDPEFRLPGNLGDYFFGPGLEQLIQQLAENDPNRYGTPPAS 189

Query: 182 KSAIEKLSTITVTEDLLNSQMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNS 241
           KSAI+ L T+ VTEDLLNS+MNQCAVC+D+F KG   KQMPCKHV+H +CLLPWL+LHNS
Sbjct: 190 KSAIDALPTVKVTEDLLNSEMNQCAVCMDEFEKGSDAKQMPCKHVYHQHCLLPWLQLHNS 249

Query: 242 CPICRFELPTDDSDYENRTRENRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGS 299
           CP+CR+ELPTDD DYEN        G + SG+  G+G +    +   RRF + L WPF  
Sbjct: 250 CPVCRYELPTDDPDYENMN-----HGAQRSGDGQGTGEN----QTTPRRFSISLPWPFRR 302

The following BLAST results are available for this feature:

BLAST of CSPI05G13810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RNG1L_ARATH	8.1e-88	54.79	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1...	[more]
RING1_GOSHI	8.4e-85	53.04	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1	[more]
RHC1A_ARATH	3.3e-33	33.44	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2...	[more]
RDUF1_ARATH	2.1e-27	32.17	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1	[more]
RDUF2_ARATH	8.0e-27	30.40	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1	[more]

BLAST of CSPI05G13810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT93_CUCSA	1.6e-175	99.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G350590 PE=4 SV=1	[more]
A0A067KMS3_JATCU	3.0e-89	55.26	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05980 PE=4 SV=1	[more]
D7LAT9_ARALL	1.3e-87	55.74	Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479...	[more]
R0G651_9BRAS	6.9e-86	53.40	Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10014036mg PE=4...	[more]
A0A061E403_THECC	2.6e-85	51.71	RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_007702 PE=4 S...	[more]

BLAST of CSPI05G13810 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19950.1	4.6e-89	54.79	RING/U-box superfamily protein	[more]
AT5G56340.1	1.1e-37	48.57	RING/U-box superfamily protein	[more]
AT1G55530.1	1.2e-36	51.09	RING/U-box superfamily protein	[more]
AT3G13430.1	1.9e-34	52.94	RING/U-box superfamily protein	[more]
AT2G40830.2	1.9e-34	33.44	RING-H2 finger C1A	[more]

BLAST of CSPI05G13810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464310\|ref\|XP_004149872.1\|	2.3e-175	99.33	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]	[more]
gi\|659096543\|ref\|XP_008449154.1\|	3.6e-104	91.30	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo]	[more]
gi\|802600248\|ref\|XP_012072845.1\|	4.3e-89	55.26	PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]	[more]
gi\|297830662\|ref\|XP_002883213.1\|	1.8e-87	55.74	zinc finger family protein [Arabidopsis lyrata subsp. lyrata]	[more]
gi\|729346272\|ref\|XP_010541863.1\|	7.6e-86	54.40	PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X2 [Tarenaya hassleria...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G13810.2	CSPI05G13810.2	mRNA
CSPI05G13810.1	CSPI05G13810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 193..236 score: 6.5
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 195..235 score: 5.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 195..236 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 192..239 score: 4.4
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 7..289 score: 3.2
None	No IPR available	PANTHER	PTHR22763:SF5	E3 UBIQUITIN-PROTEIN LIGASE CIP8	coord: 7..289 score: 3.2
None	No IPR available	PFAM	PF14369	zinc_ribbon_9	coord: 9..41 score: 8.3
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 175..246 score: 2.59

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G13810	Cla009094	Watermelon (97103) v1	cpiwmB433
CSPI05G13810	Csa5G350590	Cucumber (Chinese Long) v2	cpicuB239
CSPI05G13810	ClCG01G008200	Watermelon (Charleston Gray)	cpiwcgB394
CSPI05G13810	Lsi09G008650	Bottle gourd (USVL1VR-Ls)	cpilsiB331
CSPI05G13810	CsaV3_5G020690	Cucumber (Chinese Long) v3	cpicucB284
CSPI05G13810	Bhi12G001017	Wax gourd	cpiwgoB461
CSPI05G13810	Cucsa.014020	Cucumber (Gy14) v1	cgycpiB323
CSPI05G13810	CmaCh15G007860	Cucurbita maxima (Rimu)	cmacpiB299
CSPI05G13810	CmaCh04G022470	Cucurbita maxima (Rimu)	cmacpiB761
CSPI05G13810	CmoCh04G023480	Cucurbita moschata (Rifu)	cmocpiB751
CSPI05G13810	CmoCh15G008150	Cucurbita moschata (Rifu)	cmocpiB290
CSPI05G13810	CsGy5G013660	Cucumber (Gy14) v2	cgybcpiB225
CSPI05G13810	Carg01418	Silver-seed gourd	carcpiB0866
CSPI05G13810	Carg17779	Silver-seed gourd	carcpiB0517

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G13810	Melon (DHL92) v3.5.1	cpimeB345
CSPI05G13810	Cucurbita pepo (Zucchini)	cpecpiB190
CSPI05G13810	Cucurbita pepo (Zucchini)	cpecpiB443
CSPI05G13810	Melon (DHL92) v3.6.1	cpimedB335
CSPI05G13810	Watermelon (97103) v2	cpiwmbB364