ClCG01G008200 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G008200
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRING/U-box superfamily protein LENGTH=328
LocationCG_Chr01 : 9480026 .. 9480970 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACCACCACCATGTCCTCCGCCGTCGACAAGCCTTTCTTCTGCCACCAATGTGATCGCGCCGTTACTGTTACTGTATCCATCTCCTCCGATCCTCTTTGCCCTTTTTGTAACGAGGGTTTTCTTGAAGAGTATGACAATTCCAATGCCAACCCCAATGTCAACCTTGAGTTTGATCCCAGATCCTTTTTCCCTCCCCATCCTTTCCGTCGTTTTAATCCCCTTGTTTTCTCCTCTTCCATGGTCGTTGATCTTCAAAACCCTGGTTTATTTTCAAGGACTTCAACTCCGCCTCCCCAATCCAGTTCCTCTGTTCACCACGAGCCCTACGATCCCTTTGTTTTTCTCCAGAATCATTTACGGGGGATCTTCGAAAGTGGTGCTGATGTTGTGTTTGAAATTCCGCGCCATTCTTCCCATTCTGGTGTTTCAATGCCTCAAAATTTTGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTCATTCAGTTGCTGGCTGACAATGATCCGAACCGATATGGAACTCCGCCGGCTTCAAAATCGGCGATTGAAAAGCTTTCGACTGTGACTGTAACAGAGGTTCTTCTGAATTCGGAAATGAACCAATGTGCCGTTTGCCTTGATGGGTTTGAAAAAGGTACTAAGGTTAAGCAGATGCCTTGCAACCATGTATTTCACGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCTTGCCCTGTTTGCCGGTTCGAGTTGCCTACGGATGATGCTGATTACGAGAATCGTACACGTGGAAACCGGGTGCAGGGTATTGGATCTTCCGGAGAAGAATCAGGGTCTGGAAACAGTGGGAGCAGTACGGGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTATGGTGGCCTTTTGGGGGCCGGAACGATGGAAGTGACCACGGCGGTGGGAATGACAGCAATTGA

mRNA sequence

ATGGCCACCACCACCATGTCCTCCGCCGTCGACAAGCCTTTCTTCTGCCACCAATGTGATCGCGCCGTTACTGTTACTGTATCCATCTCCTCCGATCCTCTTTGCCCTTTTTGTAACGAGGGTTTTCTTGAAGAGTATGACAATTCCAATGCCAACCCCAATGTCAACCTTGAGTTTGATCCCAGATCCTTTTTCCCTCCCCATCCTTTCCGTCGTTTTAATCCCCTTGTTTTCTCCTCTTCCATGGTCGTTGATCTTCAAAACCCTGGTTTATTTTCAAGGACTTCAACTCCGCCTCCCCAATCCAGTTCCTCTGTTCACCACGAGCCCTACGATCCCTTTGTTTTTCTCCAGAATCATTTACGGGGGATCTTCGAAAGTGGTGCTGATGTTGTGTTTGAAATTCCGCGCCATTCTTCCCATTCTGGTGTTTCAATGCCTCAAAATTTTGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTCATTCAGTTGCTGGCTGACAATGATCCGAACCGATATGGAACTCCGCCGGCTTCAAAATCGGCGATTGAAAAGCTTTCGACTGTGACTGTAACAGAGGTTCTTCTGAATTCGGAAATGAACCAATGTGCCGTTTGCCTTGATGGGTTTGAAAAAGGTACTAAGGTTAAGCAGATGCCTTGCAACCATGTATTTCACGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCTTGCCCTGTTTGCCGGTTCGAGTTGCCTACGGATGATGCTGATTACGAGAATCGTACACGTGGAAACCGGGTGCAGGGTATTGGATCTTCCGGAGAAGAATCAGGGTCTGGAAACAGTGGGAGCAGTACGGGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTATGGTGGCCTTTTGGGGGCCGGAACGATGGAAGTGACCACGGCGGTGGGAATGACAGCAATTGA

Coding sequence (CDS)

ATGGCCACCACCACCATGTCCTCCGCCGTCGACAAGCCTTTCTTCTGCCACCAATGTGATCGCGCCGTTACTGTTACTGTATCCATCTCCTCCGATCCTCTTTGCCCTTTTTGTAACGAGGGTTTTCTTGAAGAGTATGACAATTCCAATGCCAACCCCAATGTCAACCTTGAGTTTGATCCCAGATCCTTTTTCCCTCCCCATCCTTTCCGTCGTTTTAATCCCCTTGTTTTCTCCTCTTCCATGGTCGTTGATCTTCAAAACCCTGGTTTATTTTCAAGGACTTCAACTCCGCCTCCCCAATCCAGTTCCTCTGTTCACCACGAGCCCTACGATCCCTTTGTTTTTCTCCAGAATCATTTACGGGGGATCTTCGAAAGTGGTGCTGATGTTGTGTTTGAAATTCCGCGCCATTCTTCCCATTCTGGTGTTTCAATGCCTCAAAATTTTGGCGATTACTTCATTGGACCAGGCCTCGAGCAGCTCATTCAGTTGCTGGCTGACAATGATCCGAACCGATATGGAACTCCGCCGGCTTCAAAATCGGCGATTGAAAAGCTTTCGACTGTGACTGTAACAGAGGTTCTTCTGAATTCGGAAATGAACCAATGTGCCGTTTGCCTTGATGGGTTTGAAAAAGGTACTAAGGTTAAGCAGATGCCTTGCAACCATGTATTTCACGATTATTGTCTATTGCCTTGGCTTGAATTGCATAATTCTTGCCCTGTTTGCCGGTTCGAGTTGCCTACGGATGATGCTGATTACGAGAATCGTACACGTGGAAACCGGGTGCAGGGTATTGGATCTTCCGGAGAAGAATCAGGGTCTGGAAACAGTGGGAGCAGTACGGGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTATGGTGGCCTTTTGGGGGCCGGAACGATGGAAGTGACCACGGCGGTGGGAATGACAGCAATTGA

Protein sequence

MATTTMSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGSDHGGGNDSN
Homology
[Close]
BLAST of ClCG01G008200 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 5.9e-89
Identity = 171/308 (55.52%), Postives = 203/308 (65.91%), Query Frame = 1 

Query: 10  VDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRS---FFP 69
           VDK FFC+QC++ VT+++S S+DP CP CN+GFLEEY++ N  PN +L F+P S   FFP
Sbjct: 17  VDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPN--PNQSLNFNPNSSDSFFP 76

Query: 70  -PHPFRRFNPLVFSSSMVVD--LQNPGLFSRTSTPPPQSSS-SVHHEPYDPFVFLQNHLR 129
              PF    PL+F SS      +    LF  +  P  +S+  +   + +DPF FLQNHL+
Sbjct: 77  MADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQ 136

Query: 130 GIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKS 189
            +  SG    F I  H S  G  MP NFGDYF GPGLEQLIQ LA+NDPNRYGTPPASKS
Sbjct: 137 TLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKS 196

Query: 190 AIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCP 249
           AI+ L TV VT+ +L SEMNQCAVC+D FE G+ VKQMPC HVFH  CLLPWLELHNSCP
Sbjct: 197 AIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCP 256

Query: 250 VCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRN 309
           VCRFELPTDD DYENR++G++  G G           GS  G+   RF + L WPF  R 
Sbjct: 257 VCRFELPTDDPDYENRSQGSQGSGDG----------QGSVEGQQTPRFSIQLPWPF-RRQ 311

Query: 310 DGSDHGGG 311
           DGS  G G
Sbjct: 317 DGSGSGSG 311

[Close]
BLAST of ClCG01G008200 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 7.9e-86
Identity = 169/315 (53.65%), Postives = 194/315 (61.59%), Query Frame = 1 

Query: 11  DKPFFCHQCDRAVTVTVSI-SSDPLCPFCNEGFLEEYDNSNAN-------PNVN-LEFDP 70
           +KPFFC+QC+R V VT+S  SSDP CP CNEGFLEEYDN N N       PN N + F  
Sbjct: 20  NKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHD 79

Query: 71  RSFFPPHPFRRFNPLVF--------SSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDP 130
                  PF    PL+F        SSS  +D  NP L        P  S       +DP
Sbjct: 80  LFLTLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSG------PTRSGRGDPFAFDP 139

Query: 131 FVFLQNHLRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNR 190
           F F+QNHL  +  SGA + F I  + S  G  +P N GDYFIGPGLEQLIQ LA+NDPNR
Sbjct: 140 FTFIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNR 199

Query: 191 YGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLP 250
           YGTPPASKSAIE L  V +T+  LNSE NQCAVC+D FE+GT+ KQMPC H++H  CLLP
Sbjct: 200 YGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLP 259

Query: 251 WLELHNSCPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVP 309
           WLELHNSCPVCR ELPTDD DYE R RG +    G+ G+ SG  + G +   VER FR+ 
Sbjct: 260 WLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDNR-TVERSFRIS 319

[Close]
BLAST of ClCG01G008200 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.2e-34
Identity = 98/304 (32.24%), Postives = 146/304 (48.03%), Query Frame = 1 

Query: 15  FCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPPHPFRRFN 74
           +CH+C RAV +      +P+C +C  GF+EE D + A+P                F   +
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTFDLMD 68

Query: 75  PL-VFSSSMVVDLQNPG-LFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIFESGADVV 134
              VF  + + +  +   +  RT +  P++   +      P +     +   +    D  
Sbjct: 69  AFSVFMRNRLAERSHDREIRGRTISSGPENFPGLA-----PLLIFGGQVP--YRLTGDNA 128

Query: 135 FEIPRHSSHSGVSMPQ-NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLSTVT 194
            E   +    G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L T+ 
Sbjct: 129 VEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDALPTIK 188

Query: 195 VTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFELP-- 254
           + +  L S  + C VC D FE G++ KQMPCNH++H  C++PWL  HNSCPVCR ELP  
Sbjct: 189 IAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSA 248

Query: 255 TDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPF---GGRNDGSD 311
           +  +  +NRT   R     SS   S S  +G+     ERR     +WPF   G  +  + 
Sbjct: 249 SGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN-----ERRNPFSSFWPFRSSGSSSSSTQ 296

[Close]
BLAST of ClCG01G008200 vs. Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-26
Identity = 87/285 (30.53%), Postives = 138/285 (48.42%), Query Frame = 1 

Query: 3   TTTMSSAVDKPFFCHQCDRAVTV-----TVSISSDPLCPFCNEGFLEEY-DNSNANPNVN 62
           T T ++ +   ++C+ C R V+V     T ++ S   CP C+ GF+E+  D+S+A   + 
Sbjct: 7   TPTTTTPITASYWCYSCTRFVSVWADQGTTTVGS-VACPHCDGGFIEQINDSSSAATELT 66

Query: 63  LEFDPRSFFPPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVF 122
           +                     +S+ V  + N    +R S    + S       ++P + 
Sbjct: 67  IP--------------------ASTEVRSINN----NRRSVIRRRRSG--RRPSFNPVIV 126

Query: 123 LQNHLRGIFESGADVVFEIPRHS--------SHSGVS-MPQNFGDYFIGPGLEQLIQLLA 182
           LQ    G  E G +      R +        S SG+  +P +  +  +G G E+L++ L+
Sbjct: 127 LQGGA-GEREEGEEGDAARDRRAFEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLS 186

Query: 183 DNDPN-----RYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPC 242
             + +     R G PPASKSAIE L  V +++  + SE N CAVC + FE  T+ ++MPC
Sbjct: 187 QIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEAN-CAVCTEIFETETEAREMPC 246

Query: 243 NHVFHDYCLLPWLELHNSCPVCRFELPTDDADYENRTRGNRVQGI 268
            H+FHD C++PWL + NSCPVCRFELP++     N    +   G+
Sbjct: 247 KHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSNNNEEDNAVGM 262

[Close]
BLAST of ClCG01G008200 vs. Swiss-Prot
Match: RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-24
Identity = 89/312 (28.53%), Postives = 129/312 (41.35%), Query Frame = 1 

Query: 14  FFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYD--------NSNANPNVNLEFDPRSFF 73
           ++C+ C R V V+ SIS    CP C+ GFLE           +S           P  F 
Sbjct: 6   YWCYSCSRFVWVSDSIS----CPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTRFP 65

Query: 74  PP-----------HPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPF 133
           PP           H      P + + +      NP +  R S   P  SS V  E  D  
Sbjct: 66  PPSSSSSTPSASMHADNSPTPTIVTRTRSNRSPNPVIVLRGSAAAP--SSDVVSEGLDRS 125

Query: 134 VFLQNHLRGIFESGADVVFEIPRHSSHSGVS-MPQNFGDYFIGPGLEQLIQLLADNDPNR 193
            F        ++ G D           SG+  +P +  ++ +G G ++L+  ++  + N 
Sbjct: 126 AFQM-----YYDDGTD-----------SGLRPLPPSMTEFLLGSGFDRLLDQISQIELNT 185

Query: 194 YGT------PPASKSAIEKLSTVTVTEV-LLNSEMNQCAVCLDGFEKGTKVKQMPCNHVF 253
                    PPASKSAIE L  + +    LL+   + CAVC + F   +  ++MPCNH++
Sbjct: 186 NRNLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIY 245

Query: 254 HDYCLLPWLELHNSCPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSG-------NS 292
           H  C+LPWL + NSCPVCR ELP +D           V       E+S +G         
Sbjct: 246 HPDCILPWLAIRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGG 295

[Close]
BLAST of ClCG01G008200 vs. TrEMBL
Match: A0A0A0KT93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G350590 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 8.1e-154
Identity = 262/301 (87.04%), Postives = 274/301 (91.03%), Query Frame = 1 

Query: 6   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 65
           MSSAVDKPFFCHQCDRAVTV+VSISSDPLCP C+EGFLEEYDNSN+N    L FDP SFF
Sbjct: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSN----LNFDPTSFF 60

Query: 66  PPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIF 125
            P PFRRFNPLVFSSS VVDLQNPG+FSRT  PP QS+SSVHHEPYDPFVFLQNHLR IF
Sbjct: 61  LPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIF 120

Query: 126 ESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 185
           ESGADVVFEIPRHSSHSGV MPQN GDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIE
Sbjct: 121 ESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIE 180

Query: 186 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCR 245
           KLST+TVTE LLNSEMNQCAVC+D F KG  VKQMPC HVFHDYCLLPWLELHNSCP+CR
Sbjct: 181 KLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICR 240

Query: 246 FELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 305
           FELPTDD+DYENRTRGNR+QG  SSGEESGSG+SGSS  RVERRFRVPLWWPFG RNDGS
Sbjct: 241 FELPTDDSDYENRTRGNRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGS 297

Query: 306 D 307
           D
Sbjct: 301 D 297

[Close]
BLAST of ClCG01G008200 vs. TrEMBL
Match: D7LAT9_ARALL (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479513 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 5.3e-89
Identity = 175/310 (56.45%), Postives = 210/310 (67.74%), Query Frame = 1 

Query: 10  VDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRS---FFP 69
           VDK FFC+QC+R VT+++S S+DP CP CN+GFLEEY++ N NP++N  F+P S    FP
Sbjct: 17  VDKMFFCYQCNRTVTISISSSADPFCPICNQGFLEEYEDPNPNPSLN--FNPNSVDSLFP 76

Query: 70  -PHPFRRFNPLVFSSSMV----VDLQNPGLFSRTSTPPPQSSS-SVHHEPYDPFVFLQNH 129
              PF    PL+F SS      +DL +   F+ +  P  +S+  +   + +DPF FLQNH
Sbjct: 77  MADPFSTLLPLLFGSSAASPSGIDLMSSSFFAPSMQPQARSTQQNPQSDAFDPFTFLQNH 136

Query: 130 LRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 189
           L+ +  SG  V F I  H S  G  MP NFGDYF GPGLEQLIQ LA+NDPNRYGTPPAS
Sbjct: 137 LQNLRSSGTHVQFVIENHPSDLGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPAS 196

Query: 190 KSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNS 249
           KSAI+ L TV VT+ +L SEMNQCAVC+D FE G+ VKQMPC HVFH  CLLPWL+LHNS
Sbjct: 197 KSAIDGLPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLQLHNS 256

Query: 250 CPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGG 309
           CPVCRFELPTDD DYENRT     QGI +SG+       GS  G+   RF + L WPF  
Sbjct: 257 CPVCRFELPTDDPDYENRT-----QGIQASGD-----GQGSVEGQQTPRFSIQLPWPF-R 313

Query: 310 RNDGSDHGGG 311
           R DGS  G G
Sbjct: 317 RQDGSGSGSG 313

[Close]
BLAST of ClCG01G008200 vs. TrEMBL
Match: A0A061E403_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_007702 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.0e-87
Identity = 173/322 (53.73%), Postives = 204/322 (63.35%), Query Frame = 1 

Query: 12  KPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNAN-------PNVNLE-FDPRS 71
           KPFFC+QC+R V VT+S SSDP CP CNEGFLEEY+N N N       PN NL  F    
Sbjct: 19  KPFFCYQCNRTVNVTISPSSDPSCPICNEGFLEEYENPNPNQGSAFQSPNPNLNPFSEPY 78

Query: 72  FFPPHPFRRFNPLVFSSSMV-----------VDLQNPGLFSRTSTPPPQSSSSVHHEPY- 131
                PF    PL+F SS             +D+ NP LF         S+ S   +P+ 
Sbjct: 79  LSLSDPFSSLLPLLFPSSSSSTTTSSSSPASIDVHNPSLFG--------STRSARGDPFA 138

Query: 132 -DPFVFLQNHLRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADND 191
            DPF F+QNHL  +  SGA + F I  + S  G  +P N GDYFIGPGLEQLIQ LA+ND
Sbjct: 139 FDPFAFIQNHLNDLRSSGAHIEFVIQNNPSEPGFRLPANIGDYFIGPGLEQLIQQLAEND 198

Query: 192 PNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYC 251
           PNRYGTPPASKSAI+ L +V +T+  LNSE NQCAVC+D FE+GT+ KQMPC H++H  C
Sbjct: 199 PNRYGTPPASKSAIDSLPSVKITKNHLNSEFNQCAVCMDEFEEGTQAKQMPCKHLYHKDC 258

Query: 252 LLPWLELHNSCPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTG----RV 309
           +LPWLELHNSCPVCR ELPTDD DYE R RG +  G G+ GE SG G+SG  +      V
Sbjct: 259 ILPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTGGGNDGEGSGGGDSGQRSAGDNRTV 318

[Close]
BLAST of ClCG01G008200 vs. TrEMBL
Match: A0A067KMS3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05980 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.3e-87
Identity = 173/319 (54.23%), Postives = 207/319 (64.89%), Query Frame = 1 

Query: 5   TMSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNA-----NPNVNLEF 64
           T  +A  K FFC+QC+R VTV VS SSDP CP C++GFLEEY+N N      NPN N  F
Sbjct: 8   TADAARTKWFFCYQCNRTVTVPVSASSDPSCPICHDGFLEEYENPNPHLNSQNPNPN-NF 67

Query: 65  DPRSFFPPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQN 124
           +   F  P P     PL+FSS+  +D QNP L   T T      +S   E ++P  FL+N
Sbjct: 68  NDSIFSFPDPISTLLPLLFSST-TIDFQNPNLLGNTRT------ASSDPEAFNPMDFLRN 127

Query: 125 HLRGIFESGADVVFEIPRH-SSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPP 184
           H++ +   GA + F I  H S   G  +P N GDYFIGPGLEQLIQ LA+NDPNRYGTPP
Sbjct: 128 HIQNLQSGGARIQFVIENHPSDQGGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPP 187

Query: 185 ASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELH 244
           ASKSAI+ L TV +TE +LNSE+NQCAVC D FEKG + KQMPC HV+H+ C++PWLELH
Sbjct: 188 ASKSAIDALPTVNITEEMLNSELNQCAVCKDEFEKGAEAKQMPCKHVYHNDCIVPWLELH 247

Query: 245 NSCPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTG---RVERRFRVPLW 304
           NSCPVCR+ELPTDD+DYE RTR  R        E  GS N+  S G    VERRF + L 
Sbjct: 248 NSCPVCRYELPTDDSDYETRTRVAR--------ESQGSNNTEGSVGDNRTVERRFSISLP 307

Query: 305 WPFGGRNDGSDHGGGNDSN 315
           WPFG     SD G G  S+
Sbjct: 308 WPFGRHGSSSDGGAGGQSS 310

[Close]
BLAST of ClCG01G008200 vs. TrEMBL
Match: V4LVM7_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021059mg PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 4.7e-85
Identity = 170/325 (52.31%), Postives = 202/325 (62.15%), Query Frame = 1 

Query: 2   ATTTMSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDP 61
           +T + + A+DK FFC+QCDR VTV+VS + DP CP CN GFLEEY+  N NP  NL  + 
Sbjct: 7   STDSTAPAIDKMFFCYQCDRTVTVSVSSTVDPFCPRCNGGFLEEYEEPNPNPAPNL--NS 66

Query: 62  RSFFP-PHPFRRFNPLVFS-----SSMVVDLQNPGLFSRTSTPPPQSSSSVHH------- 121
             FFP   PF    PL+F+     SS V+D  NP  F  +  P         H       
Sbjct: 67  GGFFPMADPFSTLLPLLFAPPGTNSSSVMDFINPSFFGPSMQPRSTQQPQQQHQHQNLPQ 126

Query: 122 -EPYDPFVFLQNHLRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLA 181
            E +DP  FLQNHL+ +  SG  V F I  + S     MP N GDYF GPGLEQLIQ LA
Sbjct: 127 GEAFDPITFLQNHLQHLRSSGTHVQFVIESNPSDPSNRMPGNLGDYFFGPGLEQLIQQLA 186

Query: 182 DNDPNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFH 241
           +NDPNRYGTPPASKSAI+ L TV VT+ +L SEMNQCAVC+D FE G+ VKQMPC HVFH
Sbjct: 187 ENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFH 246

Query: 242 DYCLLPWLELHNSCPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVE 301
             CLLPWL+LHNSCPVCR+ELPTDD DYENR +       G  G+ SG G       +  
Sbjct: 247 QDCLLPWLQLHNSCPVCRYELPTDDPDYENRAQ-------GQGGQSSGDGQGSVEGQQTP 306

Query: 302 RRFRVPLWWPFGGRN-DGSDHGGGN 312
           R F + L WPF  R+  GS+ G G+
Sbjct: 307 RSFSIQLPWPFRRRDGSGSEPGSGS 322

[Close]
BLAST of ClCG01G008200 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 328.9 bits (842), Expect = 3.3e-90
Identity = 171/308 (55.52%), Postives = 203/308 (65.91%), Query Frame = 1 

Query: 10  VDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRS---FFP 69
           VDK FFC+QC++ VT+++S S+DP CP CN+GFLEEY++ N  PN +L F+P S   FFP
Sbjct: 17  VDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPN--PNQSLNFNPNSSDSFFP 76

Query: 70  -PHPFRRFNPLVFSSSMVVD--LQNPGLFSRTSTPPPQSSS-SVHHEPYDPFVFLQNHLR 129
              PF    PL+F SS      +    LF  +  P  +S+  +   + +DPF FLQNHL+
Sbjct: 77  MADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQ 136

Query: 130 GIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKS 189
            +  SG    F I  H S  G  MP NFGDYF GPGLEQLIQ LA+NDPNRYGTPPASKS
Sbjct: 137 TLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKS 196

Query: 190 AIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCP 249
           AI+ L TV VT+ +L SEMNQCAVC+D FE G+ VKQMPC HVFH  CLLPWLELHNSCP
Sbjct: 197 AIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCP 256

Query: 250 VCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRN 309
           VCRFELPTDD DYENR++G++  G G           GS  G+   RF + L WPF  R 
Sbjct: 257 VCRFELPTDDPDYENRSQGSQGSGDG----------QGSVEGQQTPRFSIQLPWPF-RRQ 311

Query: 310 DGSDHGGG 311
           DGS  G G
Sbjct: 317 DGSGSGSG 311

[Close]
BLAST of ClCG01G008200 vs. TAIR10
Match: AT5G56340.1 (AT5G56340.1 RING/U-box superfamily protein)

HSP 1 Score: 159.5 bits (402), Expect = 3.5e-39
Identity = 86/178 (48.31%), Postives = 104/178 (58.43%), Query Frame = 1 

Query: 149 NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCL 208
           + GDYFIGPGL+ L+Q LA+NDPNR GTPPA K A+E L TV + E L      QC+VCL
Sbjct: 210 SLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL------QCSVCL 269

Query: 209 DGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFELPTD-DADYENRTRGNRVQGI 268
           D FEKGT+ K+MPC H FH  C++PWLELH+SCPVCRFELP+  D D E +T   RV   
Sbjct: 270 DDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKTDSERVLRT 329

Query: 269 GSSGEESGSGNSGSSTGRVE------------RRFRVPLWWPFGGRNDGSDHGGGNDS 314
             +  E+ +GN   + G  +            RRF  P  WPF G    S     + S
Sbjct: 330 -RNVRETSNGNVVENVGNADRGREDEVRSGNGRRFSFP--WPFSGLFSSSSSSSSSTS 378


HSP 2 Score: 34.3 bits (77), Expect = 1.7e-01
Identity = 14/40 (35.00%), Postives = 19/40 (47.50%), Query Frame = 1 

Query: 6  MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEE 46
          M   +   ++CH C + V   +   S+  CPFC  GF+EE
Sbjct: 1  MEETMAARYWCHMCSQMVNPVME--SEIKCPFCQSGFIEE 38

[Close]
BLAST of ClCG01G008200 vs. TAIR10
Match: AT1G55530.1 (AT1G55530.1 RING/U-box superfamily protein)

HSP 1 Score: 157.1 bits (396), Expect = 1.7e-38
Identity = 74/137 (54.01%), Postives = 89/137 (64.96%), Query Frame = 1 

Query: 149 NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCL 208
           + GDYFIGPG E L+Q LA+NDPNRYGTPPA K A+E L+TV + E L      QC+VCL
Sbjct: 174 SLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL------QCSVCL 233

Query: 209 DGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFELPTDDADYENRTRGNRVQGIG 268
           D FE GT+ K MPC H FH  CLLPWLELH+SCPVCR++LP D+A  ++ T  +   G  
Sbjct: 234 DDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSVTTTSDNNGSS 293

Query: 269 SSGEESGSGNSGSSTGR 286
           S+   +  G   S   R
Sbjct: 294 SASATTSHGAENSDGNR 304

[Close]
BLAST of ClCG01G008200 vs. TAIR10
Match: AT2G40830.2 (AT2G40830.2 RING-H2 finger C1A)

HSP 1 Score: 147.1 bits (370), Expect = 1.8e-35
Identity = 98/304 (32.24%), Postives = 146/304 (48.03%), Query Frame = 1 

Query: 15  FCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPPHPFRRFN 74
           +CH+C RAV +      +P+C +C  GF+EE D + A+P                F   +
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTFDLMD 68

Query: 75  PL-VFSSSMVVDLQNPG-LFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIFESGADVV 134
              VF  + + +  +   +  RT +  P++   +      P +     +   +    D  
Sbjct: 69  AFSVFMRNRLAERSHDREIRGRTISSGPENFPGLA-----PLLIFGGQVP--YRLTGDNA 128

Query: 135 FEIPRHSSHSGVSMPQ-NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLSTVT 194
            E   +    G+ + + N GDYF GPGLE+L + L+     R G PPA +SAI+ L T+ 
Sbjct: 129 VEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDALPTIK 188

Query: 195 VTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCRFELP-- 254
           + +  L S  + C VC D FE G++ KQMPCNH++H  C++PWL  HNSCPVCR ELP  
Sbjct: 189 IAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSA 248

Query: 255 TDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPF---GGRNDGSD 311
           +  +  +NRT   R     SS   S S  +G+     ERR     +WPF   G  +  + 
Sbjct: 249 SGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN-----ERRNPFSSFWPFRSSGSSSSSTQ 296

[Close]
BLAST of ClCG01G008200 vs. TAIR10
Match: AT3G56580.2 (AT3G56580.2 RING/U-box superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 3.4e-34
Identity = 96/309 (31.07%), Postives = 146/309 (47.25%), Query Frame = 1 

Query: 8   SAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFFPP 67
           S++    +CH+C RAV +    + D +C +C  GF+EE D   +  + ++E DP +F   
Sbjct: 2   SSIRNTHWCHRCQRAVWLR---ARDAVCSYCGGGFVEEIDIGPSRAHRDVERDP-TFDLM 61

Query: 68  HPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIFES 127
             F  F      S +     +  +  R  +   +S S++      P +            
Sbjct: 62  EAFSAF----MRSRLAERSYDREISGRLGSAGSESFSNLA-----PLLIFGGQAPFRLAG 121

Query: 128 GADVVFEIPRHSSHSGVSMPQ--NFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 187
           G +   E   + +  G+ + +  N GDYF GPGLE+LI+ L+    +R G PPA KS+I+
Sbjct: 122 GDNSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSID 181

Query: 188 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCR 247
            L T+ +T+  L S  + C VC D FE  ++ KQMPC+H++H  C++PWL  HNSCPVCR
Sbjct: 182 ALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCR 241

Query: 248 FELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 307
            ELP         +RG+      SS  +S    S +      RR      WPF   +  S
Sbjct: 242 KELP---------SRGS------SSSTQSSQNRSTNGRENSRRRNIFSNLWPFRSSSSSS 281

Query: 308 DHGGGNDSN 315
                + +N
Sbjct: 302 TQNRRDTNN 281

[Close]
BLAST of ClCG01G008200 vs. NCBI nr
Match: gi|449464310|ref|XP_004149872.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 551.2 bits (1419), Expect = 1.2e-153
Identity = 262/301 (87.04%), Postives = 274/301 (91.03%), Query Frame = 1 

Query: 6   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 65
           MSSAVDKPFFCHQCDRAVTV+VSISSDPLCP C+EGFLEEYDNSN+N    L FDP SFF
Sbjct: 1   MSSAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSN----LNFDPTSFF 60

Query: 66  PPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIF 125
            P PFRRFNPLVFSSS VVDLQNPG+FSRT  PP QS+SSVHHEPYDPFVFLQNHLR IF
Sbjct: 61  LPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIF 120

Query: 126 ESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 185
           ESGADVVFEIPRHSSHSGV MPQN GDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIE
Sbjct: 121 ESGADVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIE 180

Query: 186 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNSCPVCR 245
           KLST+TVTE LLNSEMNQCAVC+D F KG  VKQMPC HVFHDYCLLPWLELHNSCP+CR
Sbjct: 181 KLSTITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICR 240

Query: 246 FELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGGRNDGS 305
           FELPTDD+DYENRTRGNR+QG  SSGEESGSG+SGSS  RVERRFRVPLWWPFG RNDGS
Sbjct: 241 FELPTDDSDYENRTRGNRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGS 297

Query: 306 D 307
           D
Sbjct: 301 D 297

[Close]
BLAST of ClCG01G008200 vs. NCBI nr
Match: gi|659096543|ref|XP_008449154.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 367.1 bits (941), Expect = 3.1e-98
Identity = 179/210 (85.24%), Postives = 189/210 (90.00%), Query Frame = 1 

Query: 6   MSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRSFF 65
           MS AVDKPFFCHQCDRA+TV+VSISSDPLCP C+EGFLEEYDNSN+N N+NL  D RSFF
Sbjct: 1   MSFAVDKPFFCHQCDRAITVSVSISSDPLCPLCHEGFLEEYDNSNSNSNLNL--DLRSFF 60

Query: 66  PPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQNHLRGIF 125
            P PFRRFNPLVFSSS VVDLQNPG+FSRT   PPQSSSSVH EPYDPFVFLQNHLR IF
Sbjct: 61  LPQPFRRFNPLVFSSSTVVDLQNPGIFSRTLASPPQSSSSVHPEPYDPFVFLQNHLRSIF 120

Query: 126 ESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIE 185
           ESGADVVFEIP HS HSGV MPQN GDYFIGPGLEQLIQLLADNDPNRYGTP ASKSAIE
Sbjct: 121 ESGADVVFEIPCHSFHSGVPMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPSASKSAIE 180

Query: 186 KLSTVTVTEVLLNSEMNQCAVCLDGFEKGT 216
           KLST+TVTE LLNSEMNQCA+C+D FEKG+
Sbjct: 181 KLSTITVTEDLLNSEMNQCAICIDDFEKGS 208

[Close]
BLAST of ClCG01G008200 vs. NCBI nr
Match: gi|297830662|ref|XP_002883213.1| (zinc finger family protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 335.9 bits (860), Expect = 7.7e-89
Identity = 175/310 (56.45%), Postives = 210/310 (67.74%), Query Frame = 1 

Query: 10  VDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNANPNVNLEFDPRS---FFP 69
           VDK FFC+QC+R VT+++S S+DP CP CN+GFLEEY++ N NP++N  F+P S    FP
Sbjct: 17  VDKMFFCYQCNRTVTISISSSADPFCPICNQGFLEEYEDPNPNPSLN--FNPNSVDSLFP 76

Query: 70  -PHPFRRFNPLVFSSSMV----VDLQNPGLFSRTSTPPPQSSS-SVHHEPYDPFVFLQNH 129
              PF    PL+F SS      +DL +   F+ +  P  +S+  +   + +DPF FLQNH
Sbjct: 77  MADPFSTLLPLLFGSSAASPSGIDLMSSSFFAPSMQPQARSTQQNPQSDAFDPFTFLQNH 136

Query: 130 LRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPPAS 189
           L+ +  SG  V F I  H S  G  MP NFGDYF GPGLEQLIQ LA+NDPNRYGTPPAS
Sbjct: 137 LQNLRSSGTHVQFVIENHPSDLGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPAS 196

Query: 190 KSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELHNS 249
           KSAI+ L TV VT+ +L SEMNQCAVC+D FE G+ VKQMPC HVFH  CLLPWL+LHNS
Sbjct: 197 KSAIDGLPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLQLHNS 256

Query: 250 CPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTGRVERRFRVPLWWPFGG 309
           CPVCRFELPTDD DYENRT     QGI +SG+       GS  G+   RF + L WPF  
Sbjct: 257 CPVCRFELPTDDPDYENRT-----QGIQASGD-----GQGSVEGQQTPRFSIQLPWPF-R 313

Query: 310 RNDGSDHGGG 311
           R DGS  G G
Sbjct: 317 RQDGSGSGSG 313

[Close]
BLAST of ClCG01G008200 vs. NCBI nr
Match: gi|590689534|ref|XP_007043255.1| (RING/U-box superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 331.6 bits (849), Expect = 1.4e-87
Identity = 173/322 (53.73%), Postives = 204/322 (63.35%), Query Frame = 1 

Query: 12  KPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNAN-------PNVNLE-FDPRS 71
           KPFFC+QC+R V VT+S SSDP CP CNEGFLEEY+N N N       PN NL  F    
Sbjct: 19  KPFFCYQCNRTVNVTISPSSDPSCPICNEGFLEEYENPNPNQGSAFQSPNPNLNPFSEPY 78

Query: 72  FFPPHPFRRFNPLVFSSSMV-----------VDLQNPGLFSRTSTPPPQSSSSVHHEPY- 131
                PF    PL+F SS             +D+ NP LF         S+ S   +P+ 
Sbjct: 79  LSLSDPFSSLLPLLFPSSSSSTTTSSSSPASIDVHNPSLFG--------STRSARGDPFA 138

Query: 132 -DPFVFLQNHLRGIFESGADVVFEIPRHSSHSGVSMPQNFGDYFIGPGLEQLIQLLADND 191
            DPF F+QNHL  +  SGA + F I  + S  G  +P N GDYFIGPGLEQLIQ LA+ND
Sbjct: 139 FDPFAFIQNHLNDLRSSGAHIEFVIQNNPSEPGFRLPANIGDYFIGPGLEQLIQQLAEND 198

Query: 192 PNRYGTPPASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYC 251
           PNRYGTPPASKSAI+ L +V +T+  LNSE NQCAVC+D FE+GT+ KQMPC H++H  C
Sbjct: 199 PNRYGTPPASKSAIDSLPSVKITKNHLNSEFNQCAVCMDEFEEGTQAKQMPCKHLYHKDC 258

Query: 252 LLPWLELHNSCPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTG----RV 309
           +LPWLELHNSCPVCR ELPTDD DYE R RG +  G G+ GE SG G+SG  +      V
Sbjct: 259 ILPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTGGGNDGEGSGGGDSGQRSAGDNRTV 318

[Close]
BLAST of ClCG01G008200 vs. NCBI nr
Match: gi|802600248|ref|XP_012072845.1| (PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas])

HSP 1 Score: 331.3 bits (848), Expect = 1.9e-87
Identity = 173/319 (54.23%), Postives = 207/319 (64.89%), Query Frame = 1 

Query: 5   TMSSAVDKPFFCHQCDRAVTVTVSISSDPLCPFCNEGFLEEYDNSNA-----NPNVNLEF 64
           T  +A  K FFC+QC+R VTV VS SSDP CP C++GFLEEY+N N      NPN N  F
Sbjct: 8   TADAARTKWFFCYQCNRTVTVPVSASSDPSCPICHDGFLEEYENPNPHLNSQNPNPN-NF 67

Query: 65  DPRSFFPPHPFRRFNPLVFSSSMVVDLQNPGLFSRTSTPPPQSSSSVHHEPYDPFVFLQN 124
           +   F  P P     PL+FSS+  +D QNP L   T T      +S   E ++P  FL+N
Sbjct: 68  NDSIFSFPDPISTLLPLLFSST-TIDFQNPNLLGNTRT------ASSDPEAFNPMDFLRN 127

Query: 125 HLRGIFESGADVVFEIPRH-SSHSGVSMPQNFGDYFIGPGLEQLIQLLADNDPNRYGTPP 184
           H++ +   GA + F I  H S   G  +P N GDYFIGPGLEQLIQ LA+NDPNRYGTPP
Sbjct: 128 HIQNLQSGGARIQFVIENHPSDQGGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPP 187

Query: 185 ASKSAIEKLSTVTVTEVLLNSEMNQCAVCLDGFEKGTKVKQMPCNHVFHDYCLLPWLELH 244
           ASKSAI+ L TV +TE +LNSE+NQCAVC D FEKG + KQMPC HV+H+ C++PWLELH
Sbjct: 188 ASKSAIDALPTVNITEEMLNSELNQCAVCKDEFEKGAEAKQMPCKHVYHNDCIVPWLELH 247

Query: 245 NSCPVCRFELPTDDADYENRTRGNRVQGIGSSGEESGSGNSGSSTG---RVERRFRVPLW 304
           NSCPVCR+ELPTDD+DYE RTR  R        E  GS N+  S G    VERRF + L 
Sbjct: 248 NSCPVCRYELPTDDSDYETRTRVAR--------ESQGSNNTEGSVGDNRTVERRFSISLP 307

Query: 305 WPFGGRNDGSDHGGGNDSN 315
           WPFG     SD G G  S+
Sbjct: 308 WPFGRHGSSSDGGAGGQSS 310

The following BLAST results are available for this feature:
BLAST of ClCG01G008200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNG1L_ARATH5.9e-8955.52E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
RING1_GOSHI7.9e-8653.65E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
RHC1A_ARATH3.2e-3432.24Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2... [more]
RDUF2_ARATH1.4e-2630.53E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1[more]
RHC2A_ARATH1.7e-2428.53Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2... [more]
BLAST of ClCG01G008200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KT93_CUCSA8.1e-15487.04Uncharacterized protein OS=Cucumis sativus GN=Csa_5G350590 PE=4 SV=1[more]
D7LAT9_ARALL5.3e-8956.45Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479... [more]
A0A061E403_THECC1.0e-8753.73RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_007702 PE=4 S... [more]
A0A067KMS3_JATCU1.3e-8754.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05980 PE=4 SV=1[more]
V4LVM7_EUTSA4.7e-8552.31Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021059mg PE=4 SV=1[more]
BLAST of ClCG01G008200 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19950.13.3e-9055.52 RING/U-box superfamily protein[more]
AT5G56340.13.5e-3948.31 RING/U-box superfamily protein[more]
AT1G55530.11.7e-3854.01 RING/U-box superfamily protein[more]
AT2G40830.21.8e-3532.24 RING-H2 finger C1A[more]
AT3G56580.23.4e-3431.07 RING/U-box superfamily protein[more]
BLAST of ClCG01G008200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464310|ref|XP_004149872.1|1.2e-15387.04PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus][more]
gi|659096543|ref|XP_008449154.1|3.1e-9885.24PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo][more]
gi|297830662|ref|XP_002883213.1|7.7e-8956.45zinc finger family protein [Arabidopsis lyrata subsp. lyrata][more]
gi|590689534|ref|XP_007043255.1|1.4e-8753.73RING/U-box superfamily protein, putative [Theobroma cacao][more]
gi|802600248|ref|XP_012072845.1|1.9e-8754.23PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G008200.1ClCG01G008200.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 202..245
score: 4.0
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 204..244
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 204..245
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 200..248
score: 8.3
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 1..298
score: 6.1
NoneNo IPR availablePANTHERPTHR22763:SF5E3 UBIQUITIN-PROTEIN LIGASE CIP8coord: 1..298
score: 6.1
NoneNo IPR availablePFAMPF14369zinc_ribbon_9coord: 14..46
score: 5.3
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 183..251
score: 6.83

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG01G008200Csa5G350590Cucumber (Chinese Long) v2cuwcgB377
ClCG01G008200Cla009094Watermelon (97103) v1wcgwmB144
ClCG01G008200Cla97C01G008530Watermelon (97103) v2wcgwmbB089
ClCG01G008200Bhi12G001017Wax gourdwcgwgoB204
ClCG01G008200CSPI05G13810Wild cucumber (PI 183967)cpiwcgB394
ClCG01G008200Cucsa.014020Cucumber (Gy14) v1cgywcgB378
ClCG01G008200CmaCh15G007860Cucurbita maxima (Rimu)cmawcgB258
ClCG01G008200CmoCh15G008150Cucurbita moschata (Rifu)cmowcgB246
ClCG01G008200Lsi09G008650Bottle gourd (USVL1VR-Ls)lsiwcgB009
ClCG01G008200CsGy5G013660Cucumber (Gy14) v2cgybwcgB341
ClCG01G008200Carg01418Silver-seed gourdcarwcgB0801
ClCG01G008200CsaV3_5G020690Cucumber (Chinese Long) v3cucwcgB395
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G008200Cucurbita maxima (Rimu)cmawcgB260
ClCG01G008200Cucurbita maxima (Rimu)cmawcgB634
ClCG01G008200Cucurbita moschata (Rifu)cmowcgB248
ClCG01G008200Cucurbita moschata (Rifu)cmowcgB636
ClCG01G008200Wild cucumber (PI 183967)cpiwcgB390
ClCG01G008200Cucumber (Chinese Long) v2cuwcgB367
ClCG01G008200Melon (DHL92) v3.5.1mewcgB016
ClCG01G008200Melon (DHL92) v3.5.1mewcgB019
ClCG01G008200Cucurbita pepo (Zucchini)cpewcgB166
ClCG01G008200Cucurbita pepo (Zucchini)cpewcgB370
ClCG01G008200Bottle gourd (USVL1VR-Ls)lsiwcgB008
ClCG01G008200Cucumber (Gy14) v2cgybwcgB335
ClCG01G008200Melon (DHL92) v3.6.1medwcgB015
ClCG01G008200Melon (DHL92) v3.6.1medwcgB018
ClCG01G008200Silver-seed gourdcarwcgB0510
ClCG01G008200Silver-seed gourdcarwcgB0800
ClCG01G008200Cucumber (Chinese Long) v3cucwcgB388
ClCG01G008200Wax gourdwcgwgoB194