CmoCh15G008150 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G008150
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRING/U-box superfamily protein
LocationCmo_Chr15 : 4056920 .. 4057858 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTCCACCGCCAGTCTCGCCGCCGTCGACAAGCCTTTCTTCTGCCACCAGTGTGATCGCGCCGTTACTGTTATTGTATCCCTTTCATCGGATCCTCTGTGTCCGTTTTGTAATGAGGGGTTTCTTGAAGAGTACGAGAATTCCAATTCCAACTCGAATGTCAATCTTGATCGCGGAACACTTCTCCTTCCCGATCCTTTCCGTGGTTTTAATCCTCTTGTTGTTTCCTCTTCGACCGTTGTTGATCTTCAAAACCCTGGTTTATTTTCAAGAACTTTAAGTTTGGCTTCCCAATCCAATTCGTCAGTTCAGCCTGAGCCGTATGACCCCTTTGTTTTTCTTCAGAATCATTTACGGGGTATCTTCGATAGTGGTGCGGATGTTGTGTTTGAAATTCCGCGCCATGCTTCCCACTCTGGCTTTTCAATGCCTCAAAATGTTGGCGATTACTTCATTGGACCAGGCCTTGAGCAGCTAATTCAATTACTGGCTGACAATGATCCGAACCGATATGGAACTCCGCCGGCGTCTAAATCGGCGATTGAGAAGCTTCCGACTGTGACTGTTACCGAGGATCTTCTGAATTCGGAAATGAACCAGTGTGCCGTCTGCATTGATGGGTTTGAAAAAGATACTAAGGTTAAGCAGATGCCCTGCAAGCATGTATTTCACGATTATTGTATATTGCCTTGGCTTGAATTGCATAATTCATGCCCTGTTTGCCGGTTCGAGTTGCCTACAGATGATTCTGATTACGAGAATCGAACTCGTGGAAGCCAGGTGCAGGCGAATGAATCTTCCGGAGAAGAATCAGGGTCAGGAAACAGAGGAAGCAATAGTGGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTATGGTGGCCGTTTGGGGGGCGGAACGATGGGAGTGACTCCGGCGATGGGAATGTCAGCGAATGA

mRNA sequence

ATGTTCTCCACCGCCAGTCTCGCCGCCGTCGACAAGCCTTTCTTCTGCCACCAGTGTGATCGCGCCGTTACTGTTATTGTATCCCTTTCATCGGATCCTCTGTGTCCGTTTTGTAATGAGGGGTTTCTTGAAGAGTACGAGAATTCCAATTCCAACTCGAATGTCAATCTTGATCGCGGAACACTTCTCCTTCCCGATCCTTTCCGTGGTTTTAATCCTCTTGTTGTTTCCTCTTCGACCGTTGTTGATCTTCAAAACCCTGGTTTATTTTCAAGAACTTTAAGTTTGGCTTCCCAATCCAATTCGTCAGTTCAGCCTGAGCCGTATGACCCCTTTGTTTTTCTTCAGAATCATTTACGGGGTATCTTCGATAGTGGTGCGGATGTTGTGTTTGAAATTCCGCGCCATGCTTCCCACTCTGGCTTTTCAATGCCTCAAAATGTTGGCGATTACTTCATTGGACCAGGCCTTGAGCAGCTAATTCAATTACTGGCTGACAATGATCCGAACCGATATGGAACTCCGCCGGCGTCTAAATCGGCGATTGAGAAGCTTCCGACTGTGACTGTTACCGAGGATCTTCTGAATTCGGAAATGAACCAGTGTGCCGTCTGCATTGATGGGTTTGAAAAAGATACTAAGGTTAAGCAGATGCCCTGCAAGCATGTATTTCACGATTATTGTATATTGCCTTGGCTTGAATTGCATAATTCATGCCCTGTTTGCCGGTTCGAGTTGCCTACAGATGATTCTGATTACGAGAATCGAACTCGTGGAAGCCAGGTGCAGGCGAATGAATCTTCCGGAGAAGAATCAGGGTCAGGAAACAGAGGAAGCAATAGTGGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTATGGTGGCCGTTTGGGGGGCGGAACGATGGGAGTGACTCCGGCGATGGGAATGTCAGCGAATGA

Coding sequence (CDS)

ATGTTCTCCACCGCCAGTCTCGCCGCCGTCGACAAGCCTTTCTTCTGCCACCAGTGTGATCGCGCCGTTACTGTTATTGTATCCCTTTCATCGGATCCTCTGTGTCCGTTTTGTAATGAGGGGTTTCTTGAAGAGTACGAGAATTCCAATTCCAACTCGAATGTCAATCTTGATCGCGGAACACTTCTCCTTCCCGATCCTTTCCGTGGTTTTAATCCTCTTGTTGTTTCCTCTTCGACCGTTGTTGATCTTCAAAACCCTGGTTTATTTTCAAGAACTTTAAGTTTGGCTTCCCAATCCAATTCGTCAGTTCAGCCTGAGCCGTATGACCCCTTTGTTTTTCTTCAGAATCATTTACGGGGTATCTTCGATAGTGGTGCGGATGTTGTGTTTGAAATTCCGCGCCATGCTTCCCACTCTGGCTTTTCAATGCCTCAAAATGTTGGCGATTACTTCATTGGACCAGGCCTTGAGCAGCTAATTCAATTACTGGCTGACAATGATCCGAACCGATATGGAACTCCGCCGGCGTCTAAATCGGCGATTGAGAAGCTTCCGACTGTGACTGTTACCGAGGATCTTCTGAATTCGGAAATGAACCAGTGTGCCGTCTGCATTGATGGGTTTGAAAAAGATACTAAGGTTAAGCAGATGCCCTGCAAGCATGTATTTCACGATTATTGTATATTGCCTTGGCTTGAATTGCATAATTCATGCCCTGTTTGCCGGTTCGAGTTGCCTACAGATGATTCTGATTACGAGAATCGAACTCGTGGAAGCCAGGTGCAGGCGAATGAATCTTCCGGAGAAGAATCAGGGTCAGGAAACAGAGGAAGCAATAGTGGGCGTGTTGAGAGGAGGTTTAGAGTGCCGCTATGGTGGCCGTTTGGGGGGCGGAACGATGGGAGTGACTCCGGCGATGGGAATGTCAGCGAATGA
Homology
[Close]
BLAST of CmoCh15G008150 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.2e-89
Identity = 171/314 (54.46%), Postives = 209/314 (66.56%), Query Frame = 1 

Query: 3   STASLAAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNLDRGT- 62
           S A+   VDK FFC+QC++ VT+ +S S+DP CP CN+GFLEEYE+ N N ++N +  + 
Sbjct: 10  SAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSS 69

Query: 63  ---LLLPDPFRGFNPLVVSSSTVVD--LQNPGLFSRTLSLASQSNS-SVQPEPYDPFVFL 122
                + DPF    PL+  SS      +    LF  ++   ++S   + Q + +DPF FL
Sbjct: 70  DSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFL 129

Query: 123 QNHLRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTP 182
           QNHL+ +  SG    F I  H S  G  MP N GDYF GPGLEQLIQ LA+NDPNRYGTP
Sbjct: 130 QNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTP 189

Query: 183 PASKSAIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLEL 242
           PASKSAI+ LPTV VT+D+L SEMNQCAVC+D FE  + VKQMPCKHVFH  C+LPWLEL
Sbjct: 190 PASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLEL 249

Query: 243 HNSCPVCRFELPTDDSDYENRTRGSQVQANESSGEESGSGN-RGSNSGRVERRFRVPLWW 302
           HNSCPVCRFELPTDD DYENR++GSQ           GSG+ +GS  G+   RF + L W
Sbjct: 250 HNSCPVCRFELPTDDPDYENRSQGSQ-----------GSGDGQGSVEGQQTPRFSIQLPW 309

Query: 303 PFGGRNDGSDSGDG 309
           PF  R DGS SG G
Sbjct: 310 PF-RRQDGSGSGSG 311

[Close]
BLAST of CmoCh15G008150 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.0e-88
Identity = 169/321 (52.65%), Postives = 203/321 (63.24%), Query Frame = 1 

Query: 6   SLAAVDKPFFCHQCDRAVTVIVSL-SSDPLCPFCNEGFLEEYENSNSN----------SN 65
           ++   +KPFFC+QC+R V V +S  SSDP CP CNEGFLEEY+N N N          ++
Sbjct: 15  TVGVTNKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNS 74

Query: 66  VNLDRGTLLLPDPFRGFNPLV--------VSSSTVVDLQNPGLFSRTLSLASQSNSSVQP 125
           +      L L DPF    PL+         SSS  +D  NP L   T S          P
Sbjct: 75  IPFHDLFLTLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRS------GRGDP 134

Query: 126 EPYDPFVFLQNHLRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLAD 185
             +DPF F+QNHL  +  SGA + F I  + S  GF +P N+GDYFIGPGLEQLIQ LA+
Sbjct: 135 FAFDPFTFIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAE 194

Query: 186 NDPNRYGTPPASKSAIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHD 245
           NDPNRYGTPPASKSAIE LP V +T+  LNSE NQCAVC+D FE+ T+ KQMPCKH++H 
Sbjct: 195 NDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHK 254

Query: 246 YCILPWLELHNSCPVCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVER 305
            C+LPWLELHNSCPVCR ELPTDD DYE R RG+Q  +  + G+ SG  + G N   VER
Sbjct: 255 DCLLPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDNR-TVER 314

Query: 306 RFRVPLWWPFGGRNDGSDSGD 308
            FR+ L WPF  R  G   GD
Sbjct: 315 SFRISLPWPFQARGPGPAPGD 328

[Close]
BLAST of CmoCh15G008150 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-34
Identity = 102/305 (33.44%), Postives = 149/305 (48.85%), Query Frame = 1 

Query: 15  FCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNLDRGTLLLPDPFRGFNPL 74
           +CH+C RAV +      +P+C +C  GF+EE + + ++             D FR    +
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQASPF-----------DMFRSHRGV 68

Query: 75  VVSSSTVVDLQNPGLFSRTLSLASQSNS--------SVQPEPYDPFVFL-----QNHLRG 134
           V    T   +    +F R   LA +S+         S  PE +     L     Q   R 
Sbjct: 69  VERDQTFDLMDAFSVFMRN-RLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRL 128

Query: 135 IFDSGADVVFEIPRHASHSGFSMPQ-NVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKS 194
             D+  + +F    +    G  + + N GDYF GPGLE+L + L+     R G PPA +S
Sbjct: 129 TGDNAVEALF----NGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRS 188

Query: 195 AIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCP 254
           AI+ LPT+ + +  L S  + C VC D FE  ++ KQMPC H++H  CI+PWL  HNSCP
Sbjct: 189 AIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCP 248

Query: 255 VCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRN 306
           VCR ELP+      ++ R +  +   SS   S S +R + +   ERR     +WPF  R+
Sbjct: 249 VCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN---ERRNPFSSFWPF--RS 288

[Close]
BLAST of CmoCh15G008150 vs. Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.1e-30
Identity = 101/328 (30.79%), Postives = 152/328 (46.34%), Query Frame = 1 

Query: 3   STASLAAVDKPFFCHQCDRAVTVIVSLSSDP--LCPFCNEGFLEEYENSNSNSNVNLDRG 62
           +T +   +   ++C+ C R ++V     ++   LCP+CN GF+EE E+S++++   +   
Sbjct: 20  TTTTTTTLTTSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPAS 79

Query: 63  TLLLPDPFRGFNPLV--------VSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPF 122
           T  +         ++         S + V+ L   G           +   V+ E  D  
Sbjct: 80  TPEVRSVEETHRSIIRRRRSNRRTSFNPVIVLHGGG--------GGGAGERVENEEGDGA 139

Query: 123 VFLQNHLRGIFDSGADVVFEIPRHASHSGF-SMPQNVGDYFIGPGLEQLIQLLAD----- 182
              +      +D G           S SG   +P +V +  +G G E+L++ L+      
Sbjct: 140 TRERRAYEFYYDDG-----------SGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASG 199

Query: 183 NDPNRYGTPPASKSAIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHD 242
           N   R G PPASKSAIE LP V +++    +E N CAVC + FE   + ++MPCKH+FH 
Sbjct: 200 NGIGRSGNPPASKSAIESLPRVEISDCHTKAEAN-CAVCTEVFEAGIEGREMPCKHIFHG 259

Query: 243 YCILPWLELHNSCPVCRFELPTDD---SDYENRTRGSQVQANESSGEESGSGNRGSNSGR 302
            CI+PWL + NSCPVCRFELP+D    S+ E    G  +      G   G  N G   G 
Sbjct: 260 DCIVPWLSIRNSCPVCRFELPSDPIQRSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREG- 319

Query: 303 VERRFRVPLWWPFGGRNDGSDSGDGNVS 312
            ER   V L    GG   GS+ G   +S
Sbjct: 320 -ERILPVVLTEMDGG-GLGSNEGPRRIS 324

[Close]
BLAST of CmoCh15G008150 vs. Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-29
Identity = 101/321 (31.46%), Postives = 154/321 (47.98%), Query Frame = 1 

Query: 14  FFCHQCDRAVTVIVSLSSDPL----CPFCNEGFLEEYENSNSNSNVNLDRGTLLLPDPFR 73
           ++C+ C R V+V     +  +    CP C+ GF+E+  +S+S +                
Sbjct: 18  YWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSAAT--------------- 77

Query: 74  GFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRGIFDSGADV 133
               L + +ST V   N    +   S+  +  S  +P  ++P + LQ    G  + G + 
Sbjct: 78  ---ELTIPASTEVRSIN----NNRRSVIRRRRSGRRPS-FNPVIVLQGGA-GEREEGEEG 137

Query: 134 VFEIPRHA--------SHSGFS-MPQNVGDYFIGPGLEQLIQLLADNDPN-----RYGTP 193
                R A        S SG   +P +V +  +G G E+L++ L+  + +     R G P
Sbjct: 138 DAARDRRAFEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNP 197

Query: 194 PASKSAIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLEL 253
           PASKSAIE LP V +++  + SE N CAVC + FE +T+ ++MPCKH+FHD CI+PWL +
Sbjct: 198 PASKSAIESLPRVEISDCHIGSEAN-CAVCTEIFETETEAREMPCKHLFHDDCIVPWLSI 257

Query: 254 HNSCPVCRFELPTD-----DSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRV 312
            NSCPVCRFELP++     +++ E+   G  +      G   G  N     G  ER   V
Sbjct: 258 RNSCPVCRFELPSEPNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDG--ERVLPV 311

[Close]
BLAST of CmoCh15G008150 vs. TrEMBL
Match: A0A0A0KT93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G350590 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 5.2e-145
Identity = 248/298 (83.22%), Postives = 267/298 (89.60%), Query Frame = 1 

Query: 8   AAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNLDRGTLLLPDP 67
           +AVDKPFFCHQCDRAVTV VS+SSDPLCP C+EGFLEEY+NSNSN  +N D  +  LP P
Sbjct: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSN--LNFDPTSFFLPQP 62

Query: 68  FRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRGIFDSGA 127
           FR FNPLV SSSTVVDLQNPG+FSRTL+  SQS SSV  EPYDPFVFLQNHLR IF+SGA
Sbjct: 63  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 122

Query: 128 DVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLPT 187
           DVVFEIPRH+SHSG  MPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIEKL T
Sbjct: 123 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 182

Query: 188 VTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCPVCRFELP 247
           +TVTEDLLNSEMNQCAVCID F K   VKQMPCKHVFHDYC+LPWLELHNSCP+CRFELP
Sbjct: 183 ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 242

Query: 248 TDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRNDGSDS 306
           TDDSDYENRTRG+++Q NESSGEESGSG+ GS+  RVERRFRVPLWWPFG RNDGSDS
Sbjct: 243 TDDSDYENRTRGNRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDS 298

[Close]
BLAST of CmoCh15G008150 vs. TrEMBL
Match: A0A061E403_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_007702 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 2.5e-91
Identity = 177/327 (54.13%), Postives = 210/327 (64.22%), Query Frame = 1 

Query: 6   SLAAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNS-------NVNLD 65
           ++    KPFFC+QC+R V V +S SSDP CP CNEGFLEEYEN N N        N NL+
Sbjct: 13  TVGVTSKPFFCYQCNRTVNVTISPSSDPSCPICNEGFLEEYENPNPNQGSAFQSPNPNLN 72

Query: 66  RGT---LLLPDPFRGFNPLVVSSSTV-----------VDLQNPGLFSRTLSLASQSNSSV 125
             +   L L DPF    PL+  SS+            +D+ NP LF  T S         
Sbjct: 73  PFSEPYLSLSDPFSSLLPLLFPSSSSSTTTSSSSPASIDVHNPSLFGSTRSARGD----- 132

Query: 126 QPEPYDPFVFLQNHLRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLL 185
            P  +DPF F+QNHL  +  SGA + F I  + S  GF +P N+GDYFIGPGLEQLIQ L
Sbjct: 133 -PFAFDPFAFIQNHLNDLRSSGAHIEFVIQNNPSEPGFRLPANIGDYFIGPGLEQLIQQL 192

Query: 186 ADNDPNRYGTPPASKSAIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVF 245
           A+NDPNRYGTPPASKSAI+ LP+V +T++ LNSE NQCAVC+D FE+ T+ KQMPCKH++
Sbjct: 193 AENDPNRYGTPPASKSAIDSLPSVKITKNHLNSEFNQCAVCMDEFEEGTQAKQMPCKHLY 252

Query: 246 HDYCILPWLELHNSCPVCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSG-- 305
           H  CILPWLELHNSCPVCR ELPTDD DYE R RG+Q     + GE SG G+ G  S   
Sbjct: 253 HKDCILPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTGGGNDGEGSGGGDSGQRSAGD 312

Query: 306 --RVERRFRVPLWWPFGGRNDGSDSGD 308
              VER FR+ L WPF  R  GS SGD
Sbjct: 313 NRTVERSFRISLPWPFRARGSGSGSGD 333

[Close]
BLAST of CmoCh15G008150 vs. TrEMBL
Match: A0A067KMS3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05980 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.2e-90
Identity = 175/311 (56.27%), Postives = 209/311 (67.20%), Query Frame = 1 

Query: 8   AAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNV------NLDRGT 67
           AA  K FFC+QC+R VTV VS SSDP CP C++GFLEEYEN N + N       N +   
Sbjct: 11  AARTKWFFCYQCNRTVTVPVSASSDPSCPICHDGFLEEYENPNPHLNSQNPNPNNFNDSI 70

Query: 68  LLLPDPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRG 127
              PDP     PL+ SS+T+ D QNP L   T + +S       PE ++P  FL+NH++ 
Sbjct: 71  FSFPDPISTLLPLLFSSTTI-DFQNPNLLGNTRTASSD------PEAFNPMDFLRNHIQN 130

Query: 128 IFDSGADVVFEIPRHAS-HSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKS 187
           +   GA + F I  H S   GF +P N+GDYFIGPGLEQLIQ LA+NDPNRYGTPPASKS
Sbjct: 131 LQSGGARIQFVIENHPSDQGGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKS 190

Query: 188 AIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCP 247
           AI+ LPTV +TE++LNSE+NQCAVC D FEK  + KQMPCKHV+H+ CI+PWLELHNSCP
Sbjct: 191 AIDALPTVNITEEMLNSELNQCAVCKDEFEKGAEAKQMPCKHVYHNDCIVPWLELHNSCP 250

Query: 248 VCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRN 307
           VCR+ELPTDDSDYE RTR     A ES G  +  G+ G N   VERRF + L WPFG   
Sbjct: 251 VCRYELPTDDSDYETRTR----VARESQGSNNTEGSVGDNR-TVERRFSISLPWPFGRHG 309

Query: 308 DGSDSGDGNVS 312
             SD G G  S
Sbjct: 311 SSSDGGAGGQS 309

[Close]
BLAST of CmoCh15G008150 vs. TrEMBL
Match: D7LAT9_ARALL (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479513 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.8e-89
Identity = 175/315 (55.56%), Postives = 213/315 (67.62%), Query Frame = 1 

Query: 3   STASLAAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNLDRGTL 62
           S A+   VDK FFC+QC+R VT+ +S S+DP CP CN+GFLEEYE+ N N ++N +  ++
Sbjct: 10  SAATEPEVDKMFFCYQCNRTVTISISSSADPFCPICNQGFLEEYEDPNPNPSLNFNPNSV 69

Query: 63  --LLP--DPFRGFNPLVVSSSTV----VDLQNPGLFSRTLSLASQSNS-SVQPEPYDPFV 122
             L P  DPF    PL+  SS      +DL +   F+ ++   ++S   + Q + +DPF 
Sbjct: 70  DSLFPMADPFSTLLPLLFGSSAASPSGIDLMSSSFFAPSMQPQARSTQQNPQSDAFDPFT 129

Query: 123 FLQNHLRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYG 182
           FLQNHL+ +  SG  V F I  H S  G  MP N GDYF GPGLEQLIQ LA+NDPNRYG
Sbjct: 130 FLQNHLQNLRSSGTHVQFVIENHPSDLGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYG 189

Query: 183 TPPASKSAIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWL 242
           TPPASKSAI+ LPTV VT+D+L SEMNQCAVC+D FE  + VKQMPCKHVFH  C+LPWL
Sbjct: 190 TPPASKSAIDGLPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWL 249

Query: 243 ELHNSCPVCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLW 302
           +LHNSCPVCRFELPTDD DYENRT+G Q          SG G +GS  G+   RF + L 
Sbjct: 250 QLHNSCPVCRFELPTDDPDYENRTQGIQA---------SGDG-QGSVEGQQTPRFSIQLP 309

Query: 303 WPFGGRNDGSDSGDG 309
           WPF  R DGS SG G
Sbjct: 310 WPF-RRQDGSGSGSG 313

[Close]
BLAST of CmoCh15G008150 vs. TrEMBL
Match: A0A0D2VAA1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G068800 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.5e-88
Identity = 170/317 (53.63%), Postives = 204/317 (64.35%), Query Frame = 1 

Query: 9   AVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYEN---SNSNSNVN-LDRGTLLL 68
           A +KPFFC+QC+R VTV +  S+DP CP CNEGFLEEYEN    N N N N L    L +
Sbjct: 19  ATNKPFFCYQCNRTVTVTIYPSADPSCPLCNEGFLEEYENPSFENPNPNSNPLSEPFLSV 78

Query: 69  PDPFRGFNPLVVSSSTV----------VDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVF 128
            DPF    PL+  SS+           +DL NP  F  T S          P  +DPF F
Sbjct: 79  SDPFSSLLPLLFPSSSSTTSSSPSPASIDLHNPNSFGSTRS------GRGDPFAFDPFTF 138

Query: 129 LQNHLRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGT 188
           +QNHL  +   GA + F I  + S  GF +P N+GDYFIGPGLEQLIQ LA+NDPNRYGT
Sbjct: 139 IQNHLNDLRSRGAQIEFVIQNNPSEPGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGT 198

Query: 189 PPASKSAIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLE 248
           PPASKSAI+ LP+V + ++ LNSE NQCAVC+D FE+  + KQMPCKH++H  CILPWLE
Sbjct: 199 PPASKSAIDALPSVKIAKNNLNSEFNQCAVCMDEFEEGAEAKQMPCKHLYHKDCILPWLE 258

Query: 249 LHNSCPVCRFELPTDDSDYENRTRGSQVQANESSGEESGSGN--RGSNSGRVERRFRVPL 308
           LHNSCPVCR ELPTDD DYE R RG+Q     + G+ SG  N  R  ++   ER FR+ L
Sbjct: 259 LHNSCPVCRHELPTDDPDYERRVRGAQATGGGNDGDSSGGDNEQRSGDNRTAERSFRISL 318

Query: 309 WWPFGGRNDGSDSGDGN 310
            WPF  R  GS SG G+
Sbjct: 319 PWPFRARGSGSGSGSGD 329

[Close]
BLAST of CmoCh15G008150 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 331.3 bits (848), Expect = 6.6e-91
Identity = 171/314 (54.46%), Postives = 209/314 (66.56%), Query Frame = 1 

Query: 3   STASLAAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNLDRGT- 62
           S A+   VDK FFC+QC++ VT+ +S S+DP CP CN+GFLEEYE+ N N ++N +  + 
Sbjct: 10  SAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSS 69

Query: 63  ---LLLPDPFRGFNPLVVSSSTVVD--LQNPGLFSRTLSLASQSNS-SVQPEPYDPFVFL 122
                + DPF    PL+  SS      +    LF  ++   ++S   + Q + +DPF FL
Sbjct: 70  DSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFL 129

Query: 123 QNHLRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTP 182
           QNHL+ +  SG    F I  H S  G  MP N GDYF GPGLEQLIQ LA+NDPNRYGTP
Sbjct: 130 QNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTP 189

Query: 183 PASKSAIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLEL 242
           PASKSAI+ LPTV VT+D+L SEMNQCAVC+D FE  + VKQMPCKHVFH  C+LPWLEL
Sbjct: 190 PASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLEL 249

Query: 243 HNSCPVCRFELPTDDSDYENRTRGSQVQANESSGEESGSGN-RGSNSGRVERRFRVPLWW 302
           HNSCPVCRFELPTDD DYENR++GSQ           GSG+ +GS  G+   RF + L W
Sbjct: 250 HNSCPVCRFELPTDDPDYENRSQGSQ-----------GSGDGQGSVEGQQTPRFSIQLPW 309

Query: 303 PFGGRNDGSDSGDG 309
           PF  R DGS SG G
Sbjct: 310 PF-RRQDGSGSGSG 311

[Close]
BLAST of CmoCh15G008150 vs. TAIR10
Match: AT5G56340.1 (AT5G56340.1 RING/U-box superfamily protein)

HSP 1 Score: 162.2 bits (409), Expect = 5.3e-40
Identity = 90/178 (50.56%), Postives = 111/178 (62.36%), Query Frame = 1 

Query: 147 NVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLPTVTVTEDLLNSEMNQCAVCI 206
           ++GDYFIGPGL+ L+Q LA+NDPNR GTPPA K A+E LPTV + E L      QC+VC+
Sbjct: 210 SLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL------QCSVCL 269

Query: 207 DGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCPVCRFELPTD---------DSDYENRT 266
           D FEK T+ K+MPCKH FH  CI+PWLELH+SCPVCRFELP+          DS+   RT
Sbjct: 270 DDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKTDSERVLRT 329

Query: 267 RGSQVQANESSGEESGSGNRGS----NSGRVERRFRVPLWWPFGGRNDGSDSGDGNVS 312
           R  +  +N +  E  G+ +RG      SG   RRF  P  WPF G    S S   + S
Sbjct: 330 RNVRETSNGNVVENVGNADRGREDEVRSGN-GRRFSFP--WPFSGLFSSSSSSSSSTS 378

[Close]
BLAST of CmoCh15G008150 vs. TAIR10
Match: AT1G55530.1 (AT1G55530.1 RING/U-box superfamily protein)

HSP 1 Score: 152.5 bits (384), Expect = 4.2e-37
Identity = 79/169 (46.75%), Postives = 98/169 (57.99%), Query Frame = 1 

Query: 147 NVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLPTVTVTEDLLNSEMNQCAVCI 206
           ++GDYFIGPG E L+Q LA+NDPNRYGTPPA K A+E L TV + E L      QC+VC+
Sbjct: 174 SLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL------QCSVCL 233

Query: 207 DGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCPVCRFELPTDDSDYENRTR------GS 266
           D FE  T+ K MPC H FH  C+LPWLELH+SCPVCR++LP D++  ++ T        S
Sbjct: 234 DDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSVTTTSDNNGSS 293

Query: 267 QVQANESSGEESGSGNRGSNSGRVERR-------------FRVPLWWPF 297
              A  S G E+  GNR       E               F +P  WPF
Sbjct: 294 SASATTSHGAENSDGNRRQEEEEEEEEEEEEENENNDGSGFSIP--WPF 334

[Close]
BLAST of CmoCh15G008150 vs. TAIR10
Match: AT2G40830.2 (AT2G40830.2 RING-H2 finger C1A)

HSP 1 Score: 148.3 bits (373), Expect = 8.0e-36
Identity = 102/305 (33.44%), Postives = 149/305 (48.85%), Query Frame = 1 

Query: 15  FCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNLDRGTLLLPDPFRGFNPL 74
           +CH+C RAV +      +P+C +C  GF+EE + + ++             D FR    +
Sbjct: 9   WCHRCQRAVRLH---GQEPVCFYCGGGFVEELDMAQASPF-----------DMFRSHRGV 68

Query: 75  VVSSSTVVDLQNPGLFSRTLSLASQSNS--------SVQPEPYDPFVFL-----QNHLRG 134
           V    T   +    +F R   LA +S+         S  PE +     L     Q   R 
Sbjct: 69  VERDQTFDLMDAFSVFMRN-RLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRL 128

Query: 135 IFDSGADVVFEIPRHASHSGFSMPQ-NVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKS 194
             D+  + +F    +    G  + + N GDYF GPGLE+L + L+     R G PPA +S
Sbjct: 129 TGDNAVEALF----NGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRS 188

Query: 195 AIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCP 254
           AI+ LPT+ + +  L S  + C VC D FE  ++ KQMPC H++H  CI+PWL  HNSCP
Sbjct: 189 AIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCP 248

Query: 255 VCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRN 306
           VCR ELP+      ++ R +  +   SS   S S +R + +   ERR     +WPF  R+
Sbjct: 249 VCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN---ERRNPFSSFWPF--RS 288

[Close]
BLAST of CmoCh15G008150 vs. TAIR10
Match: AT4G26400.2 (AT4G26400.2 RING/U-box superfamily protein)

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-35
Identity = 75/168 (44.64%), Postives = 102/168 (60.71%), Query Frame = 1 

Query: 148 VGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLPTVTVTEDLLNSEMNQCAVCID 207
           +GDYF+G  L+ L++ LADND  R+G+ PA K  ++ LPTV ++E L      QC++C+D
Sbjct: 193 IGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKISESL------QCSICLD 252

Query: 208 GFEKDTKVKQMPCKHVFHDYCILPWLELHNSCPVCRFELPTDDSDYEN----RTRGSQVQ 267
            F+K ++ K+MPCKH FH  CI+PWLELH+SCPVCR+ELP DD    N    RTR  ++ 
Sbjct: 253 DFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDETKVNPVRPRTRTLEIN 312

Query: 268 ANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRNDGSDSGDGNVS 312
            +  + E+        NS   ERRF  P  WPF G    S S   + S
Sbjct: 313 VSNENVEDD-----ARNSNVSERRFSFP--WPFSGLFSSSSSSSASAS 347

[Close]
BLAST of CmoCh15G008150 vs. NCBI nr
Match: gi|449464310|ref|XP_004149872.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 521.9 bits (1343), Expect = 7.5e-145
Identity = 248/298 (83.22%), Postives = 267/298 (89.60%), Query Frame = 1 

Query: 8   AAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNLDRGTLLLPDP 67
           +AVDKPFFCHQCDRAVTV VS+SSDPLCP C+EGFLEEY+NSNSN  +N D  +  LP P
Sbjct: 3   SAVDKPFFCHQCDRAVTVSVSISSDPLCPLCHEGFLEEYDNSNSN--LNFDPTSFFLPQP 62

Query: 68  FRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRGIFDSGA 127
           FR FNPLV SSSTVVDLQNPG+FSRTL+  SQS SSV  EPYDPFVFLQNHLR IF+SGA
Sbjct: 63  FRRFNPLVFSSSTVVDLQNPGIFSRTLAPPSQSTSSVHHEPYDPFVFLQNHLRSIFESGA 122

Query: 128 DVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLPT 187
           DVVFEIPRH+SHSG  MPQNVGDYFIGPGLEQLIQLLA+NDPNRYGTPPASKSAIEKL T
Sbjct: 123 DVVFEIPRHSSHSGVPMPQNVGDYFIGPGLEQLIQLLAENDPNRYGTPPASKSAIEKLST 182

Query: 188 VTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCPVCRFELP 247
           +TVTEDLLNSEMNQCAVCID F K   VKQMPCKHVFHDYC+LPWLELHNSCP+CRFELP
Sbjct: 183 ITVTEDLLNSEMNQCAVCIDDFGKGIVVKQMPCKHVFHDYCLLPWLELHNSCPICRFELP 242

Query: 248 TDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRNDGSDS 306
           TDDSDYENRTRG+++Q NESSGEESGSG+ GS+  RVERRFRVPLWWPFG RNDGSDS
Sbjct: 243 TDDSDYENRTRGNRMQGNESSGEESGSGSSGSSMRRVERRFRVPLWWPFGSRNDGSDS 298

[Close]
BLAST of CmoCh15G008150 vs. NCBI nr
Match: gi|659096543|ref|XP_008449154.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 356.7 bits (914), Expect = 4.2e-95
Identity = 169/203 (83.25%), Postives = 182/203 (89.66%), Query Frame = 1 

Query: 9   AVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNLDRGTLLLPDPF 68
           AVDKPFFCHQCDRA+TV VS+SSDPLCP C+EGFLEEY+NSNSNSN+NLD  +  LP PF
Sbjct: 4   AVDKPFFCHQCDRAITVSVSISSDPLCPLCHEGFLEEYDNSNSNSNLNLDLRSFFLPQPF 63

Query: 69  RGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRGIFDSGAD 128
           R FNPLV SSSTVVDLQNPG+FSRTL+   QS+SSV PEPYDPFVFLQNHLR IF+SGAD
Sbjct: 64  RRFNPLVFSSSTVVDLQNPGIFSRTLASPPQSSSSVHPEPYDPFVFLQNHLRSIFESGAD 123

Query: 129 VVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKSAIEKLPTV 188
           VVFEIP H+ HSG  MPQNVGDYFIGPGLEQLIQLLADNDPNRYGTP ASKSAIEKL T+
Sbjct: 124 VVFEIPCHSFHSGVPMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPSASKSAIEKLSTI 183

Query: 189 TVTEDLLNSEMNQCAVCIDGFEK 212
           TVTEDLLNSEMNQCA+CID FEK
Sbjct: 184 TVTEDLLNSEMNQCAICIDDFEK 206

[Close]
BLAST of CmoCh15G008150 vs. NCBI nr
Match: gi|590689534|ref|XP_007043255.1| (RING/U-box superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 343.6 bits (880), Expect = 3.7e-91
Identity = 177/327 (54.13%), Postives = 210/327 (64.22%), Query Frame = 1 

Query: 6   SLAAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNS-------NVNLD 65
           ++    KPFFC+QC+R V V +S SSDP CP CNEGFLEEYEN N N        N NL+
Sbjct: 13  TVGVTSKPFFCYQCNRTVNVTISPSSDPSCPICNEGFLEEYENPNPNQGSAFQSPNPNLN 72

Query: 66  RGT---LLLPDPFRGFNPLVVSSSTV-----------VDLQNPGLFSRTLSLASQSNSSV 125
             +   L L DPF    PL+  SS+            +D+ NP LF  T S         
Sbjct: 73  PFSEPYLSLSDPFSSLLPLLFPSSSSSTTTSSSSPASIDVHNPSLFGSTRSARGD----- 132

Query: 126 QPEPYDPFVFLQNHLRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLL 185
            P  +DPF F+QNHL  +  SGA + F I  + S  GF +P N+GDYFIGPGLEQLIQ L
Sbjct: 133 -PFAFDPFAFIQNHLNDLRSSGAHIEFVIQNNPSEPGFRLPANIGDYFIGPGLEQLIQQL 192

Query: 186 ADNDPNRYGTPPASKSAIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVF 245
           A+NDPNRYGTPPASKSAI+ LP+V +T++ LNSE NQCAVC+D FE+ T+ KQMPCKH++
Sbjct: 193 AENDPNRYGTPPASKSAIDSLPSVKITKNHLNSEFNQCAVCMDEFEEGTQAKQMPCKHLY 252

Query: 246 HDYCILPWLELHNSCPVCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSG-- 305
           H  CILPWLELHNSCPVCR ELPTDD DYE R RG+Q     + GE SG G+ G  S   
Sbjct: 253 HKDCILPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTGGGNDGEGSGGGDSGQRSAGD 312

Query: 306 --RVERRFRVPLWWPFGGRNDGSDSGD 308
              VER FR+ L WPF  R  GS SGD
Sbjct: 313 NRTVERSFRISLPWPFRARGSGSGSGD 333

[Close]
BLAST of CmoCh15G008150 vs. NCBI nr
Match: gi|802600248|ref|XP_012072845.1| (PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas])

HSP 1 Score: 340.5 bits (872), Expect = 3.1e-90
Identity = 175/311 (56.27%), Postives = 209/311 (67.20%), Query Frame = 1 

Query: 8   AAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNV------NLDRGT 67
           AA  K FFC+QC+R VTV VS SSDP CP C++GFLEEYEN N + N       N +   
Sbjct: 11  AARTKWFFCYQCNRTVTVPVSASSDPSCPICHDGFLEEYENPNPHLNSQNPNPNNFNDSI 70

Query: 68  LLLPDPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLRG 127
              PDP     PL+ SS+T+ D QNP L   T + +S       PE ++P  FL+NH++ 
Sbjct: 71  FSFPDPISTLLPLLFSSTTI-DFQNPNLLGNTRTASSD------PEAFNPMDFLRNHIQN 130

Query: 128 IFDSGADVVFEIPRHAS-HSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKS 187
           +   GA + F I  H S   GF +P N+GDYFIGPGLEQLIQ LA+NDPNRYGTPPASKS
Sbjct: 131 LQSGGARIQFVIENHPSDQGGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKS 190

Query: 188 AIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHNSCP 247
           AI+ LPTV +TE++LNSE+NQCAVC D FEK  + KQMPCKHV+H+ CI+PWLELHNSCP
Sbjct: 191 AIDALPTVNITEEMLNSELNQCAVCKDEFEKGAEAKQMPCKHVYHNDCIVPWLELHNSCP 250

Query: 248 VCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRN 307
           VCR+ELPTDDSDYE RTR     A ES G  +  G+ G N   VERRF + L WPFG   
Sbjct: 251 VCRYELPTDDSDYETRTR----VARESQGSNNTEGSVGDNR-TVERRFSISLPWPFGRHG 309

Query: 308 DGSDSGDGNVS 312
             SD G G  S
Sbjct: 311 SSSDGGAGGQS 309

[Close]
BLAST of CmoCh15G008150 vs. NCBI nr
Match: gi|729346272|ref|XP_010541863.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X2 [Tarenaya hassleriana])

HSP 1 Score: 338.2 bits (866), Expect = 1.5e-89
Identity = 169/309 (54.69%), Postives = 205/309 (66.34%), Query Frame = 1 

Query: 6   SLAAVDKPFFCHQCDRAVTVIVSLSSDPLCPFCNEGFLEEYENSNSNSNVNLD-RGTLLL 65
           S +A DK FFC+QC+R VTV +S S+DP CP CN+GFLEEYE+ N N + NL+  G    
Sbjct: 9   STSAADKLFFCYQCNRTVTVSISSSTDPFCPLCNDGFLEEYEDPNPNPSPNLNPSGVFPF 68

Query: 66  PDPFRGFNPLVVS-----SSTVVDLQNPGLFSRTLSLASQSNSSVQPEP--YDPFVFLQN 125
            DP     P++ +     SS V+D  NP +F + +        S QP+P  +DP  FLQN
Sbjct: 69  SDPLSSLLPILFAPSASPSSNVIDFFNPSIFGQPMP-----GRSTQPDPIAFDPVTFLQN 128

Query: 126 HLRGIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPA 185
           HL+ +  SG  V F I  H S   F +P N+GDYF GPGLEQLIQ LA+NDPNRYGTPPA
Sbjct: 129 HLQSLRSSGTHVQFVIENHPSDPEFRLPGNLGDYFFGPGLEQLIQQLAENDPNRYGTPPA 188

Query: 186 SKSAIEKLPTVTVTEDLLNSEMNQCAVCIDGFEKDTKVKQMPCKHVFHDYCILPWLELHN 245
           SKSAI+ LPTV VTEDLLNSEMNQCAVC+D FEK +  KQMPCKHV+H +C+LPWL+LHN
Sbjct: 189 SKSAIDALPTVKVTEDLLNSEMNQCAVCMDEFEKGSDAKQMPCKHVYHQHCLLPWLQLHN 248

Query: 246 SCPVCRFELPTDDSDYENRTRGSQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFG 305
           SCPVCR+ELPTDD DYEN   G+Q          SG G     +    RRF + L WPF 
Sbjct: 249 SCPVCRYELPTDDPDYENMNHGAQ---------RSGDGQGTGENQTTPRRFSISLPWPFR 303

Query: 306 GRNDGSDSG 307
            ++ GS SG
Sbjct: 309 RQDGGSGSG 303

The following BLAST results are available for this feature:
BLAST of CmoCh15G008150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNG1L_ARATH1.2e-8954.46E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
RING1_GOSHI1.0e-8852.65E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
RHC1A_ARATH1.4e-3433.44Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2... [more]
RDUF1_ARATH6.1e-3030.79E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1[more]
RDUF2_ARATH1.8e-2931.46E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1[more]
BLAST of CmoCh15G008150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KT93_CUCSA5.2e-14583.22Uncharacterized protein OS=Cucumis sativus GN=Csa_5G350590 PE=4 SV=1[more]
A0A061E403_THECC2.5e-9154.13RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_007702 PE=4 S... [more]
A0A067KMS3_JATCU2.2e-9056.27Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05980 PE=4 SV=1[more]
D7LAT9_ARALL1.8e-8955.56Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479... [more]
A0A0D2VAA1_GOSRA1.5e-8853.63Uncharacterized protein OS=Gossypium raimondii GN=B456_013G068800 PE=4 SV=1[more]
BLAST of CmoCh15G008150 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19950.16.6e-9154.46 RING/U-box superfamily protein[more]
AT5G56340.15.3e-4050.56 RING/U-box superfamily protein[more]
AT1G55530.14.2e-3746.75 RING/U-box superfamily protein[more]
AT2G40830.28.0e-3633.44 RING-H2 finger C1A[more]
AT4G26400.21.0e-3544.64 RING/U-box superfamily protein[more]
BLAST of CmoCh15G008150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464310|ref|XP_004149872.1|7.5e-14583.22PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus][more]
gi|659096543|ref|XP_008449154.1|4.2e-9583.25PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo][more]
gi|590689534|ref|XP_007043255.1|3.7e-9154.13RING/U-box superfamily protein, putative [Theobroma cacao][more]
gi|802600248|ref|XP_012072845.1|3.1e-9056.27PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas][more]
gi|729346272|ref|XP_010541863.1|1.5e-8954.69PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X2 [Tarenaya hassleria... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G008150.1CmoCh15G008150.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 200..243
score: 4.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 202..242
score: 8.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 202..243
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 198..246
score: 5.0
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 1..296
score: 7.2
NoneNo IPR availablePANTHERPTHR22763:SF5E3 UBIQUITIN-PROTEIN LIGASE CIP8coord: 1..296
score: 7.2
NoneNo IPR availablePFAMPF14369zinc_ribbon_9coord: 14..46
score: 1.2
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 181..251
score: 9.28