CsGy3G018660 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G018660
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUbiquitin--protein ligase
LocationChr3 : 14789427 .. 14791517 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCATCCCTCAGCCTCAAAACCCCCGATCTCGAGTCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCCAGGGCTCGAAATTTCCCTCGTCTCCCCGCCATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGAAACCGATGCGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATTGAGGAGATTCCAAGGGTGAGAATTACGGGGAAGCATTTGGAGAAGGATTCGAATTGTGCGATTTGTAAAGAGGAATTTGAAATGGGAGAGGAAGTTAGGGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGTGTTGTTCCTTGGTTGAGAATGCATAACACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAATTCCGGGAAGAAGAAGAAGAAGGTGAAAGAAGAGGGAATGGATGGTGGAACTTGGTGTGTTGCTGGTGGCCGTTCCGTGTAGTCGGCGATTGGGCTCGCCGTCTCCGGTTTGCTGATTCGGGTGATAGTTTCTTCGCCGTTGAACGTAAGGTTTTTTCTTTTCAAGTTTCTTCAGAGATGGATGGAGTTGGGAAACAAAATATAAATAACAAACCATTTTTTTATAATCAAAATGAAATCGTTGAGATTATTACAATTATTTTAAATTTTATCTTTAATTTTGTAATTTTAGATTAGATTACTGTGTTTTGAATTCTCTTGTAACCATTTATATTTTTTACTTTTGCTGAGAATTTTTCAAAAAAAAAAAAAAATACAAACTACACAATTTATAAACACAACTCCGTATTTGATAAAAGATTAAATGTTAATTTGTATTGGTAGAGTTTGACATAAAATGTCTAATTTCAATCTATATACTTTGGTAGTTTAATATCTACTAGCATTCTAACCATAAATTTTAATAACACATTCACGTAAATATTATAAATATTATTATTATTGTCAAACCAAATAGAATAAAAAATAATTTTGAGAACTATATTAAAAATGTATTGAATACATTCAAACAAATACTAAAATATAATTTTCTTAAAAAACAAAAAAGTGACAGAAATCCATGAAGATCCTTACACAAGACAACTAGATTCAAAATGACAAAATGGACCATCAAAATCAAACAAGTCAACTTAGAAAAGGACAAAATTTGACCATCAAAATCAAACTAATCAAATTCACAAAAACATAACTAAACTCTAACTCAAAACAATCAAATAGACAAAAAAAAAAAAATAATAAAAAAAAAAAGAGTTTGCAAAATCTAAATATTTAAATCTAATGTTAATTAATGTGTACTGGTTGGAGTTTGCAGCAGGTTCGTGGATGTACTCTTGGCTAGCCAATTAACCCACCCCCGGTAATATCTACTACATTCCTTACTCTTCATTTCCTTTCATTTCTTAACCAATTGATTAGGTACATGAAATTGTGTTGGATTTAGTAATGTAATTAACAAGCATTTTGCTTTCTTATTCCATTTCTTTCTTGTAAGTAACTACCAAAATTGCAGACAGTCAAAAGGAACCTTTGTTTAAGAACTGTACATCTTTTACTAAAGAAAATAAGACTATATAATAATAGTTCCTTTTGAGGTCTGCAACTTCAAATCTCTCCTTTCATAAATTAATTATATTTTTTTCTAAAACATATATAATTTAAACCCAACCAAGGAGGAGAGTTGGTTCCCTTTGGAAAACAACATCCCTATTTCCCTGCGTAGGGTTAATATAAAGGGAAATATCACCTTTTGTCTTCTTCTTATTCTTCTTCTTATTCTTCTTCGGACTCTCTATACTGACTTTCTTTGTTCTTGAGGAGTGAACCAAAAATGAGTTTCCCATCTGATTGTATTCTTCAGACTATTGTATGTTGATTATGTAGGTGATAGATGTAAATGAGTTGTAG

mRNA sequence

ATGTCCATCCCTCAGCCTCAAAACCCCCGATCTCGAGTCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCCAGGGCTCGAAATTTCCCTCGTCTCCCCGCCATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGAAACCGATGCGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATTGAGGAGATTCCAAGGGTGAGAATTACGGGGAAGCATTTGGAGAAGGATTCGAATTGTGCGATTTGTAAAGAGGAATTTGAAATGGGAGAGGAAGTTAGGGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGTGTTGTTCCTTGGTTGAGAATGCATAACACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAATTCCGGGAAGAAGAAGAAGAAGGTGAAAGAAGAGGGAATGGATGGTGGAACTTGGTGTGTTGCTGGTGGCCGTTCCGTGTAGTCGGCGATTGGGCTCGCCGTCTCCGGTTTGCTGATTCGGGTGATAGTTTCTTCGCCGTTGAACGTAAGGTGATAGATGTAAATGAGTTGTAG

Coding sequence (CDS)

ATGTCCATCCCTCAGCCTCAAAACCCCCGATCTCGAGTCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCCAGGGCTCGAAATTTCCCTCGTCTCCCCGCCATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGAAACCGATGCGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATTGAGGAGATTCCAAGGGTGAGAATTACGGGGAAGCATTTGGAGAAGGATTCGAATTGTGCGATTTGTAAAGAGGAATTTGAAATGGGAGAGGAAGTTAGGGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGTGTTGTTCCTTGGTTGAGAATGCATAACACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAATTCCGGGAAGAAGAAGAAGAAGGTGAAAGAAGAGGGAATGGATGGTGGAACTTGGTGTGTTGCTGGTGGCCGTTCCGTGTAGTCGGCGATTGGGCTCGCCGTCTCCGGTTTGCTGATTCGGGTGATAGTTTCTTCGCCGTTGAACGTAAGGTGATAGATGTAAATGAGTTGTAG

Protein sequence

MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGSGFNGGRGEEFREEEEEGERRGNGWWNLVCCWWPFRVVGDWARRLRFADSGDSFFAVERKVIDVNEL
Homology
[Close]
BLAST of CsGy3G018660 vs. NCBI nr
Match: KGN57566.1 (hypothetical protein Csa_3G214060 [Cucumis sativus])

HSP 1 Score: 453.8 bits (1166), Expect = 3.8e-124
Identity = 235/240 (97.92%), Postives = 237/240 (98.75%), Query Frame = 0 

Query: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGE-EFXXXXXXXXXXXXXXXXXXXXXXPFRVVGDWARRLRFADSGDSFFAVERK 240
           GFNGGRGE   XXXXXXXXXXXXXXXXXXXXXXPFR+VGDWARRLRFADSGDSFFAVERK
Sbjct: 181 GFNGGRGEXXXXXXXXXXXXXXXXXXXXXXXXXPFRLVGDWARRLRFADSGDSFFAVERK 240

[Close]
BLAST of CsGy3G018660 vs. NCBI nr
Match: XP_011651263.1 (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus] >XP_011651264.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus] >XP_011651265.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus])

HSP 1 Score: 451.4 bits (1160), Expect = 1.9e-123
Identity = 234/239 (97.91%), Postives = 236/239 (98.74%), Query Frame = 0 

Query: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGE-EFXXXXXXXXXXXXXXXXXXXXXXPFRVVGDWARRLRFADSGDSFFAVER 239
           GFNGGRGE   XXXXXXXXXXXXXXXXXXXXXXPFR+VGDWARRLRFADSGDSFFAVER
Sbjct: 181 GFNGGRGEXXXXXXXXXXXXXXXXXXXXXXXXXPFRLVGDWARRLRFADSGDSFFAVER 239

[Close]
BLAST of CsGy3G018660 vs. NCBI nr
Match: XP_004149959.1 (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651258.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651259.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651260.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651261.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651262.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus])

HSP 1 Score: 449.5 bits (1155), Expect = 7.3e-123
Identity = 233/238 (97.90%), Postives = 235/238 (98.74%), Query Frame = 0 

Query: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGE-EFXXXXXXXXXXXXXXXXXXXXXXPFRVVGDWARRLRFADSGDSFFAVE 238
           GFNGGRGE   XXXXXXXXXXXXXXXXXXXXXXPFR+VGDWARRLRFADSGDSFFAVE
Sbjct: 181 GFNGGRGEXXXXXXXXXXXXXXXXXXXXXXXXXPFRLVGDWARRLRFADSGDSFFAVE 238

[Close]
BLAST of CsGy3G018660 vs. NCBI nr
Match: XP_011651266.1 (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X3 [Cucumis sativus])

HSP 1 Score: 449.5 bits (1155), Expect = 7.3e-123
Identity = 233/238 (97.90%), Postives = 235/238 (98.74%), Query Frame = 0 

Query: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGE-EFXXXXXXXXXXXXXXXXXXXXXXPFRVVGDWARRLRFADSGDSFFAVE 238
           GFNGGRGE   XXXXXXXXXXXXXXXXXXXXXXPFR+VGDWARRLRFADSGDSFFAVE
Sbjct: 181 GFNGGRGEXXXXXXXXXXXXXXXXXXXXXXXXXPFRLVGDWARRLRFADSGDSFFAVE 238

[Close]
BLAST of CsGy3G018660 vs. NCBI nr
Match: XP_008456082.1 (PREDICTED: uncharacterized protein LOC103496124 [Cucumis melo])

HSP 1 Score: 413.3 bits (1061), Expect = 5.8e-112
Identity = 208/242 (85.95%), Postives = 212/242 (87.60%), Query Frame = 0 

Query: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSR+VVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLP ISPPIVQRWGFE+TD SWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGS-- 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGS  
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSXX 180

Query: 181 ---GSGFNGGRGEEFXXXXXXXXXXXXXXXXXXXXXXPFRVVGDWARRLRFADSGDSFFA 238
                          XXXXXXXXXXXXX         P R++GDWARRLRFADSGDSFF 
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV 240

[Close]
BLAST of CsGy3G018660 vs. TAIR10
Match: AT1G68180.1 (RING/U-box superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 2.9e-33
Identity = 84/209 (40.19%), Postives = 110/209 (52.63%), Query Frame = 0 

Query: 10  RSRVVVNGGFTRTTNMHYYWCRICRRIIRI---SLGNPLEISITCPFCSR--NLRHELDV 69
           R RV+VN G  RT   HY++CR C R IR+    L  P+     CPFCSR  NL  ELD+
Sbjct: 6   RPRVIVN-GTRRTRTFHYFYCRHCSRTIRLRSFGLYGPI-----CPFCSREINLHDELDI 65

Query: 70  ARA--------RNFPRLPAISPPIVQRWGFEE----TDASWITLQ-----FPRPAVNSGI 129
            R          ++  L  I+ P   R+  ++    TD  +  +       P PA  S I
Sbjct: 66  MRPSRPYWDSDTDWITLHLINEPRSNRFNHDDLVYNTDEEFADVMPSVQIGPPPASQSAI 125

Query: 130 EEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCR 189
           E +  V IT + L K+  CAICKEEFE+GEE +EL C H YHS C+V WL +HNTCP+CR
Sbjct: 126 EAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICR 185

Query: 190 YTLENIG------DEGSGSGFNGGRGEEF 191
           + + N+G      DEG     +  R   F
Sbjct: 186 FEV-NLGVSESNVDEGGSYNIDNDRSNRF 207

[Close]
BLAST of CsGy3G018660 vs. TAIR10
Match: AT2G40830.2 (RING-H2 finger C1A)

HSP 1 Score: 108.2 bits (269), Expect = 7.2e-24
Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = 0 

Query: 86  FEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL-EKDSNCAICKEEFEMGEEVRELPC 145
           FE+  A   T + P PA  S I+ +P ++I  +HL   DSNC +CK+EFE+G E +++PC
Sbjct: 150 FEQLSAG-TTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPC 209

Query: 146 KHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGS 179
            H YHSDC+VPWL  HN+CPVCR  L +     S
Sbjct: 210 NHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSS 242

[Close]
BLAST of CsGy3G018660 vs. TAIR10
Match: AT3G56580.2 (RING/U-box superfamily protein)

HSP 1 Score: 105.5 bits (262), Expect = 4.7e-23
Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 0 

Query: 99  PRPAVNSGIEEIPRVRITGKHLE-KDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWL 158
           P PA  S I+ +P ++IT KHL+  DS+C +CK+EFE+  E +++PC H YHSDC+VPWL
Sbjct: 158 PPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWL 217

Query: 159 RMHNTCPVCRYTLENIGDEGS 179
             HN+CPVCR  L + G   S
Sbjct: 218 VQHNSCPVCRKELPSRGSSSS 238

[Close]
BLAST of CsGy3G018660 vs. TAIR10
Match: AT3G10815.1 (RING/U-box superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 2.3e-22
Identity = 56/170 (32.94%), Postives = 80/170 (47.06%), Query Frame = 0 

Query: 20  TRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHEL----------------D 79
           T T   + +WC  CRR I +      E +  C +C       L                +
Sbjct: 2   TTTRRKNTHWCHTCRRGIHLQGEGRREGA--CIYCGNTFLERLYENVELSPFDLFGLAYE 61

Query: 80  VARARNFPRLPAISPPIVQRWGFEETDASWITLQ---FPRPAVNSGIEEIPRVRITGKHL 139
            AR R   R   I     ++  FEE       LQ    P PA  + I  + +++I  KHL
Sbjct: 62  EARNRRNNRRSVIG----EQLSFEELFNRLPALQDRRGPPPASLAAINSLQKIKIRQKHL 121

Query: 140 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTL 171
             D  C +C+++FE+G + R++PCKH YHS+C++PWL   NTCPVCR  L
Sbjct: 122 GLDPYCPVCQDQFEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCRKEL 165

[Close]
BLAST of CsGy3G018660 vs. TAIR10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 101.3 bits (251), Expect = 8.8e-22
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0 

Query: 88  ETDASWITLQFPRPAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHF 147
           E  A+ I      PA  S IE +PRV I+  H+  ++NCA+C E FE   E RE+PCKH 
Sbjct: 161 EASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHL 220

Query: 148 YHSDCVVPWLRMHNTCPVCRYTL 171
           +H DC+VPWL + N+CPVCR+ L
Sbjct: 221 FHDDCIVPWLSIRNSCPVCRFEL 243

[Close]
BLAST of CsGy3G018660 vs. Swiss-Prot
Match: sp|O22197|RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-22
Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = 0 

Query: 86  FEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL-EKDSNCAICKEEFEMGEEVRELPC 145
           FE+  A   T + P PA  S I+ +P ++I  +HL   DSNC +CK+EFE+G E +++PC
Sbjct: 150 FEQLSAG-TTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPC 209

Query: 146 KHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGS 179
            H YHSDC+VPWL  HN+CPVCR  L +     S
Sbjct: 210 NHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSS 242

[Close]
BLAST of CsGy3G018660 vs. Swiss-Prot
Match: sp|Q94AK4|RZF1_ARATH (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.4e-22
Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 0 

Query: 99  PRPAVNSGIEEIPRVRITGKHLE-KDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWL 158
           P PA  S I+ +P ++IT KHL+  DS+C +CK+EFE+  E +++PC H YHSDC+VPWL
Sbjct: 158 PPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWL 217

Query: 159 RMHNTCPVCRYTLENIGDEGS 179
             HN+CPVCR  L + G   S
Sbjct: 218 VQHNSCPVCRKELPSRGSSSS 238

[Close]
BLAST of CsGy3G018660 vs. Swiss-Prot
Match: sp|Q940T5|RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.6e-20
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0 

Query: 88  ETDASWITLQFPRPAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHF 147
           E  A+ I      PA  S IE +PRV I+  H+  ++NCA+C E FE   E RE+PCKH 
Sbjct: 161 EASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHL 220

Query: 148 YHSDCVVPWLRMHNTCPVCRYTL 171
           +H DC+VPWL + N+CPVCR+ L
Sbjct: 221 FHDDCIVPWLSIRNSCPVCRFEL 243

[Close]
BLAST of CsGy3G018660 vs. Swiss-Prot
Match: sp|Q9SNB6|RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.1e-20
Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 0 

Query: 101 PAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMH 160
           PA  S IE +PRV I+  H + ++NCA+C E FE G E RE+PCKH +H DC+VPWL + 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIR 249

Query: 161 NTCPVCRYTL 171
           N+CPVCR+ L
Sbjct: 250 NSCPVCRFEL 259

[Close]
BLAST of CsGy3G018660 vs. Swiss-Prot
Match: sp|Q7T0Q3|R126A_XENLA (E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis OX=8355 GN=rnf126-a PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.5e-20
Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = 0 

Query: 77  SPPIVQRWGFE--ETDASWITLQF----PRPAVNSGIEEIPRVRITGKHLEKDSNCAICK 136
           S P+   WG    +T  + +  QF    P PA N  I+ +P ++IT +H+     C +CK
Sbjct: 173 SNPMDYAWGANGLDTIITQLLNQFENTGPPPADNEKIQALPTIQITEEHVGSGLECPVCK 232

Query: 137 EEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTL 171
           E++ +GE VR+LPC H +H+DC++PWL  H+TCPVCR +L
Sbjct: 233 EDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272

[Close]
BLAST of CsGy3G018660 vs. TrEMBL
Match: tr|A0A0A0LC10|A0A0A0LC10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214060 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 2.5e-124
Identity = 235/240 (97.92%), Postives = 237/240 (98.75%), Query Frame = 0 

Query: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGE-EFXXXXXXXXXXXXXXXXXXXXXXPFRVVGDWARRLRFADSGDSFFAVERK 240
           GFNGGRGE   XXXXXXXXXXXXXXXXXXXXXXPFR+VGDWARRLRFADSGDSFFAVERK
Sbjct: 181 GFNGGRGEXXXXXXXXXXXXXXXXXXXXXXXXXPFRLVGDWARRLRFADSGDSFFAVERK 240

[Close]
BLAST of CsGy3G018660 vs. TrEMBL
Match: tr|A0A1S3C2I0|A0A1S3C2I0_CUCME (uncharacterized protein LOC103496124 OS=Cucumis melo OX=3656 GN=LOC103496124 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 3.8e-112
Identity = 208/242 (85.95%), Postives = 212/242 (87.60%), Query Frame = 0 

Query: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSR+VVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLP ISPPIVQRWGFE+TD SWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGS-- 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGS  
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSXX 180

Query: 181 ---GSGFNGGRGEEFXXXXXXXXXXXXXXXXXXXXXXPFRVVGDWARRLRFADSGDSFFA 238
                          XXXXXXXXXXXXX         P R++GDWARRLRFADSGDSFF 
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV 240

[Close]
BLAST of CsGy3G018660 vs. TrEMBL
Match: tr|V7BR96|V7BR96_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G213500g PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 7.3e-39
Identity = 87/223 (39.01%), Postives = 112/223 (50.22%), Query Frame = 0 

Query: 10  RSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARARN 69
           RSRVVVN G  RT   HY+WC  C+R +R+   N       CP+C  +LR+ELD++R R 
Sbjct: 65  RSRVVVN-GVRRTRTFHYFWCLYCQRTVRLPFTN--SDGSICPYCFHHLRYELDISRPRL 124

Query: 70  FPRLP-----------------AISPPI----------VQRWGFEETDAS----WITLQF 129
              +P                  + PP+            +W  E    S    WITL+F
Sbjct: 125 LMNVPNNLQPSPATQLLDSLALVLDPPLRRQNNNHFNTTTQWETENEHGSDHHAWITLRF 184

Query: 130 PR----------------------------PAVNSGIEEIPRVRITGKHLEKDSNCAICK 174
           PR                            PA +S I  +P V++T  HL  D NC +CK
Sbjct: 185 PRPTRADRPIFSDDDFINGVIENSNRTRPPPAASSAISALPVVKLTQAHLASDPNCPVCK 244

[Close]
BLAST of CsGy3G018660 vs. TrEMBL
Match: tr|A0A151T7Z5|A0A151T7Z5_CAJCA (RING finger protein 115 family OS=Cajanus cajan OX=3821 GN=KK1_017722 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.8e-38
Identity = 95/291 (32.65%), Postives = 125/291 (42.96%), Query Frame = 0 

Query: 7   QNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 66
           Q  R R+VVN G  RT   HY+WC  C+R +R+   N  +I   CP+C   LR+ELD++R
Sbjct: 3   QTGRPRIVVN-GVRRTRTFHYFWCLYCQRTVRLPFTNN-DIGSLCPYCFHQLRYELDISR 62

Query: 67  ARNFPRLP-----------------AISPPI-------VQRWGFEETDAS----WITLQF 126
            R    +P                  + PP+         +W  EE D +    WITL+F
Sbjct: 63  PRLLMNVPNNLEPSPATQLMHGLALILDPPLRXXXXXXXXQWQTEENDGNSDPQWITLRF 122

Query: 127 -----------------------------------------------PRPAVNSGIEEIP 186
                                                          P PA +S I  +P
Sbjct: 123 SRPTRPPRPISPPQNLVPNTTHTLFDENNNTLDEFIDGVIQNNNRPGPPPATSSAIAALP 182

Query: 187 RVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLE 223
            V++T  HL  DSNC+ICK+EFE+  E RELPCKHFYHS+C+VPWLRMHNTCPVCRY L+
Sbjct: 183 MVKLTQAHLASDSNCSICKDEFELDMEARELPCKHFYHSECIVPWLRMHNTCPVCRYELQ 242

[Close]
BLAST of CsGy3G018660 vs. TrEMBL
Match: tr|K7M9N3|K7M9N3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100785893 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.1e-37
Identity = 88/251 (35.06%), Postives = 114/251 (45.42%), Query Frame = 0 

Query: 10  RSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARARN 69
           R R+VVN G  RT   HY+WC  C+R +R+   N      TCP+C   LR+ELD++R R 
Sbjct: 6   RPRIVVN-GVRRTRTFHYFWCLYCQRTVRLPFTN--NDGSTCPYCFHQLRYELDISRPRL 65

Query: 70  FPRLP-----------------AISPPI----------VQRWGFEETDA----SWITLQF 129
              +P                  + PP+             W  E  D     +WITL+F
Sbjct: 66  LMNVPNNLEPSQATQLMHNLALILDPPLRRQNNNHLNTTPHWETENEDGLNPQAWITLRF 125

Query: 130 PR-------------------------------------------------PAVNSGIEE 181
           PR                                                 PA +S I  
Sbjct: 126 PRPTXXXXXXXXXXXXXXXXXDTDHDTLFENTILDDFIDGVIQNNNRPGPPPATSSAIAA 185

The following BLAST results are available for this feature:
BLAST of CsGy3G018660 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57566.13.8e-12497.92hypothetical protein Csa_3G214060 [Cucumis sativus][more]
XP_011651263.11.9e-12397.91PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus] >XP_0... [more]
XP_004149959.17.3e-12397.90PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_0... [more]
XP_011651266.17.3e-12397.90PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X3 [Cucumis sativus][more]
XP_008456082.15.8e-11285.95PREDICTED: uncharacterized protein LOC103496124 [Cucumis melo][more]
BLAST of CsGy3G018660 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68180.12.9e-3340.19RING/U-box superfamily protein[more]
AT2G40830.27.2e-2447.87RING-H2 finger C1A[more]
AT3G56580.24.7e-2351.85RING/U-box superfamily protein[more]
AT3G10815.12.3e-2232.94RING/U-box superfamily protein[more]
AT5G59550.18.8e-2249.40zinc finger (C3HC4-type RING finger) family protein[more]
BLAST of CsGy3G018660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O22197|RHC1A_ARATH1.3e-2247.87Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
sp|Q94AK4|RZF1_ARATH8.4e-2251.85E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV... [more]
sp|Q940T5|RDUF2_ARATH1.6e-2049.40E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ... [more]
sp|Q9SNB6|RDUF1_ARATH2.1e-2055.71E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ... [more]
sp|Q7T0Q3|R126A_XENLA3.5e-2042.00E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis OX=8355 GN=rnf126-a PE=2 ... [more]
BLAST of CsGy3G018660 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LC10|A0A0A0LC10_CUCSA2.5e-12497.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214060 PE=4 SV=1[more]
tr|A0A1S3C2I0|A0A1S3C2I0_CUCME3.8e-11285.95uncharacterized protein LOC103496124 OS=Cucumis melo OX=3656 GN=LOC103496124 PE=... [more]
tr|V7BR96|V7BR96_PHAVU7.3e-3939.01Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G213500g PE=4 ... [more]
tr|A0A151T7Z5|A0A151T7Z5_CAJCA2.8e-3832.65RING finger protein 115 family OS=Cajanus cajan OX=3821 GN=KK1_017722 PE=4 SV=1[more]
tr|K7M9N3|K7M9N3_SOYBN1.1e-3735.06Uncharacterized protein OS=Glycine max OX=3847 GN=100785893 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G018660.1CsGy3G018660.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 126..166
e-value: 2.6E-7
score: 40.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 125..167
e-value: 2.1E-13
score: 50.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 126..167
score: 12.357
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 93..172
e-value: 1.0E-21
score: 78.3
NoneNo IPR availablePANTHERPTHR44290FAMILY NOT NAMEDcoord: 98..217
coord: 24..69
NoneNo IPR availableCDDcd16667RING-H2_RNF126_likecoord: 126..167
e-value: 8.88666E-24
score: 90.0696
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 107..171

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G018660Cla013043Watermelon (97103) v1cgybwmB221
CsGy3G018660Csa3G214060Cucumber (Chinese Long) v2cgybcuB109
CsGy3G018660MELO3C019481Melon (DHL92) v3.5.1cgybmeB204
CsGy3G018660ClCG05G009740Watermelon (Charleston Gray)cgybwcgB206
CsGy3G018660CSPI03G18810Wild cucumber (PI 183967)cgybcpiB110
CsGy3G018660CmaCh04G005160Cucurbita maxima (Rimu)cgybcmaB419
CsGy3G018660CmoCh04G005550Cucurbita moschata (Rifu)cgybcmoB396
CsGy3G018660Lsi05G001870Bottle gourd (USVL1VR-Ls)cgyblsiB189
CsGy3G018660Cp4.1LG01g02150Cucurbita pepo (Zucchini)cgybcpeB372
CsGy3G018660MELO3C019481.2Melon (DHL92) v3.6.1cgybmedB210
CsGy3G018660CsaV3_3G018890Cucumber (Chinese Long) v3cgybcucB117
CsGy3G018660Cla97C05G092100Watermelon (97103) v2cgybwmbB199
CsGy3G018660Bhi01G001227Wax gourdcgybwgoB269
CsGy3G018660Carg26428Silver-seed gourdcarcgybB0064
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G018660Cucurbita maxima (Rimu)cgybcmaB332
CsGy3G018660Cucurbita maxima (Rimu)cgybcmaB410
CsGy3G018660Cucurbita moschata (Rifu)cgybcmoB301
CsGy3G018660Cucurbita moschata (Rifu)cgybcmoB316
CsGy3G018660Cucurbita moschata (Rifu)cgybcmoB386
CsGy3G018660Cucurbita pepo (Zucchini)cgybcpeB317
CsGy3G018660Cucurbita pepo (Zucchini)cgybcpeB362
CsGy3G018660Bottle gourd (USVL1VR-Ls)cgyblsiB198
CsGy3G018660Melon (DHL92) v3.5.1cgybmeB210
CsGy3G018660Melon (DHL92) v3.6.1cgybmedB215
CsGy3G018660Watermelon (Charleston Gray)cgybwcgB214
CsGy3G018660Watermelon (97103) v1cgybwmB229
CsGy3G018660Silver-seed gourdcarcgybB0380
CsGy3G018660Silver-seed gourdcarcgybB0650
CsGy3G018660Watermelon (97103) v2cgybwmbB206
CsGy3G018660Wax gourdcgybwgoB271