Csa3G214060 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G214060
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRING finger protein; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
LocationChr3 : 14329790 .. 14330564 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCATCCCTCAGCCTCAAAACCCCCGATCTCGAGTCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAACCTCCGCCATGAATTGGACGTAGCCAGGGCTCGAAATTTCCCTCGTCTCCCCGCCATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGAAACCGATGCGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATTGAGGAGATTCCAAGGGTGAGAATTACGGGGAAGCATTTGGAGAAGGATTCGAATTGTGCGATTTGTAAAGAGGAATTTGAAATGGGAGAGGAAGTTAGAGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGTGTTATTCCTTGGTTGAGAATGCATAACACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAATTCCGGGAAGAAGAAGAAGAAGAAGGTGAAAGAAGAGGGAATGGATGGTGGAACTTGGTGTGTTGCTGGTGGCCGTTCCGTTTAGTCGGCGATTGGGCTCGCCGTCTCCGGTTTGCTGATTCGGGTGATAGTTTCTTCGCCGTTGAACGTAAGGTTTTTTCTTTTCAAGTTTCTTCAGAGATGGATGGAGTTGGGAAACAAAATATAA

mRNA sequence

ATGTCCATCCCTCAGCCTCAAAACCCCCGATCTCGAGTCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAACCTCCGCCATGAATTGGACGTAGCCAGGGCTCGAAATTTCCCTCGTCTCCCCGCCATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGAAACCGATGCGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATTGAGGAGATTCCAAGGGTGAGAATTACGGGGAAGCATTTGGAGAAGGATTCGAATTGTGCGATTTGTAAAGAGGAATTTGAAATGGGAGAGGAAGTTAGAGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGTGTTATTCCTTGGTTGAGAATGCATAACACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAATTCCGGGAAGAAGAAGAAGAAGAAGGTGAAAGAAGAGGGAATGGATGGTGGAACTTGGTGTGTTGCTGGTGGCCGTTCCGTTTAGTCGGCGATTGGGCTCGCCGTCTCCGGTTTGCTGATTCGGGTGATAGTTTCTTCGCCGTTGAACGTAAGAGATGGATGGAGTTGGGAAACAAAATATAA

Coding sequence (CDS)

ATGTCCATCCCTCAGCCTCAAAACCCCCGATCTCGAGTCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAACCTCCGCCATGAATTGGACGTAGCCAGGGCTCGAAATTTCCCTCGTCTCCCCGCCATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGAAACCGATGCGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATTGAGGAGATTCCAAGGGTGAGAATTACGGGGAAGCATTTGGAGAAGGATTCGAATTGTGCGATTTGTAAAGAGGAATTTGAAATGGGAGAGGAAGTTAGAGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGTGTTATTCCTTGGTTGAGAATGCATAACACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAATTCCGGGAAGAAGAAGAAGAAGAAGGTGAAAGAAGAGGGAATGGATGGTGGAACTTGGTGTGTTGCTGGTGGCCGTTCCGTTTAGTCGGCGATTGGGCTCGCCGTCTCCGGTTTGCTGATTCGGGTGATAGTTTCTTCGCCGTTGAACGTAAGAGATGGATGGAGTTGGGAAACAAAATATAA

Protein sequence

MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGSGFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVERKRWMELGNKI*
Homology
[Close]
BLAST of Csa3G214060 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.8e-23
Identity = 55/137 (40.15%), Postives = 72/137 (52.55%), Query Frame = 1 

Query: 86  FEETDASWITLQFPRPAVNSGIEEIPRVRITGKHLEK-DSNCAICKEEFEMGEEVRELPC 145
           FE+  A   T + P PA  S I+ +P ++I  +HL   DSNC +CK+EFE+G E +++PC
Sbjct: 150 FEQLSAG-TTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPC 209

Query: 146 KHFYHSDCVIPWLRMHNTCPVCRYTLENI-GDEGSGSGFNGGRGEEFREEEEEEGER-RG 205
            H YHSDC++PWL  HN+CPVCR  L +  G   S +     R             R  G
Sbjct: 210 NHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENG 269

Query: 206 NGWWNLVCCWWPFRLVG 220
           N   N    +WPFR  G
Sbjct: 270 NERRNPFSSFWPFRSSG 285

[Close]
BLAST of Csa3G214060 vs. Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.3e-19
Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 1 

Query: 101 PAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMH 160
           PA  S IE +PRV I+  H + ++NCA+C E FE G E RE+PCKH +H DC++PWL + 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIR 249

Query: 161 NTCPVCRYTL 171
           N+CPVCR+ L
Sbjct: 250 NSCPVCRFEL 259

[Close]
BLAST of Csa3G214060 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.0e-19
Identity = 41/99 (41.41%), Postives = 61/99 (61.62%), Query Frame = 1 

Query: 101 PAVNSGIEEIPRVRITGKHLEKDSN-CAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRM 160
           PA  S I+ +P V++T   L+ + N CA+C +EFE G +V+++PCKH +H DC++PWL +
Sbjct: 190 PASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLEL 249

Query: 161 HNTCPVCRYTL---------ENIGDEGSGSGFNGGRGEE 190
           HN+CPVCR+ L          + G +GSG G     G++
Sbjct: 250 HNSCPVCRFELPTDDPDYENRSQGSQGSGDGQGSVEGQQ 288

[Close]
BLAST of Csa3G214060 vs. Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.9e-19
Identity = 40/83 (48.19%), Postives = 52/83 (62.65%), Query Frame = 1 

Query: 88  ETDASWITLQFPRPAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHF 147
           E  A+ I      PA  S IE +PRV I+  H+  ++NCA+C E FE   E RE+PCKH 
Sbjct: 161 EASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHL 220

Query: 148 YHSDCVIPWLRMHNTCPVCRYTL 171
           +H DC++PWL + N+CPVCR+ L
Sbjct: 221 FHDDCIVPWLSIRNSCPVCRFEL 243

[Close]
BLAST of Csa3G214060 vs. Swiss-Prot
Match: R126A_XENLA (E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.7e-19
Identity = 44/100 (44.00%), Postives = 59/100 (59.00%), Query Frame = 1 

Query: 77  SPPIVQRWGFEETDASWITL--QF----PRPAVNSGIEEIPRVRITGKHLEKDSNCAICK 136
           S P+   WG    D     L  QF    P PA N  I+ +P ++IT +H+     C +CK
Sbjct: 173 SNPMDYAWGANGLDTIITQLLNQFENTGPPPADNEKIQALPTIQITEEHVGSGLECPVCK 232

Query: 137 EEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTL 171
           E++ +GE VR+LPC H +H+DC+IPWL  H+TCPVCR +L
Sbjct: 233 EDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272

[Close]
BLAST of Csa3G214060 vs. TrEMBL
Match: A0A0A0LC10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214060 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 1.3e-151
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1 

Query: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVERK 240
           GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVERK
Sbjct: 181 GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVERK 240

Query: 241 RWMELGNKI 250
           RWMELGNKI
Sbjct: 241 RWMELGNKI 249

[Close]
BLAST of Csa3G214060 vs. TrEMBL
Match: V7BR96_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G213500g PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39
Identity = 103/273 (37.73%), Postives = 132/273 (48.35%), Query Frame = 1 

Query: 10  RSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARARN 69
           RSRVVVNG   RT   HY+WC  C+R +R+   N  + SI CP+C  +LR+ELD++R R 
Sbjct: 65  RSRVVVNG-VRRTRTFHYFWCLYCQRTVRLPFTNS-DGSI-CPYCFHHLRYELDISRPRL 124

Query: 70  FPRLP-----------------AISPPI----------VQRWGFEETDAS----WITLQF 129
              +P                  + PP+            +W  E    S    WITL+F
Sbjct: 125 LMNVPNNLQPSPATQLLDSLALVLDPPLRRQNNNHFNTTTQWETENEHGSDHHAWITLRF 184

Query: 130 PRP----------------------------AVNSGIEEIPRVRITGKHLEKDSNCAICK 189
           PRP                            A +S I  +P V++T  HL  D NC +CK
Sbjct: 185 PRPTRADRPIFSDDDFINGVIENSNRTRPPPAASSAISALPVVKLTQAHLASDPNCPVCK 244

Query: 190 EEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGSGFNGGRGEEF 224
           +EFE+  E RELPCKHFYHSDC+IPWLRMHNTCPVCRY L+ +    +   F   R E  
Sbjct: 245 DEFEVEMEARELPCKHFYHSDCIIPWLRMHNTCPVCRYELQGVVTPDANYSFQ--RDEND 304

[Close]
BLAST of Csa3G214060 vs. TrEMBL
Match: A0A0L9VH95_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g270800 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.9e-34
Identity = 97/288 (33.68%), Postives = 122/288 (42.36%), Query Frame = 1 

Query: 10  RSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARA-- 69
           RSR+VVNG   RT   HY+WC  C+R +RI   N      TCP+C  +LR+ELD++R   
Sbjct: 6   RSRIVVNG-VRRTRTFHYFWCLYCQRTVRIPFTN--NDGSTCPYCFHHLRYELDISRPRL 65

Query: 70  -------------------------RNFPRLPAISPPIVQRWGFEETDAS----WITLQF 129
                                        R           W  E    +    WITL+F
Sbjct: 66  LMNVPNNLQPSPATQLLHNLALILDPPLRRQNNNHFNTTTHWETENEHGADSQAWITLRF 125

Query: 130 PR------------------------------------------PAVNSGIEEIPRVRIT 189
           PR                                          PA +S I  +P V++T
Sbjct: 126 PRPTPAPRPISPPQNMVPPTNDTDTLLDDFIDGMIQNNNRPGPPPAASSAIAALPMVKLT 185

Query: 190 GKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDE 224
             HL  D NC ICK+EFE+  E RELPC HFYHSDC+IPWLRMHNTCPVCRY L+ +   
Sbjct: 186 QTHLGSDPNCPICKDEFELDMEARELPCNHFYHSDCIIPWLRMHNTCPVCRYELQGVVTP 245

[Close]
BLAST of Csa3G214060 vs. TrEMBL
Match: A0A0S3S1U9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G009900 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.9e-34
Identity = 97/288 (33.68%), Postives = 122/288 (42.36%), Query Frame = 1 

Query: 10  RSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARA-- 69
           RSR+VVNG   RT   HY+WC  C+R +RI   N      TCP+C  +LR+ELD++R   
Sbjct: 6   RSRIVVNG-VRRTRTFHYFWCLYCQRTVRIPFTN--NDGSTCPYCFHHLRYELDISRPRL 65

Query: 70  -------------------------RNFPRLPAISPPIVQRWGFEETDAS----WITLQF 129
                                        R           W  E    +    WITL+F
Sbjct: 66  LMNVPNNLQPSPATQLLHNLALILDPPLRRQNNNHFNTTTHWETENEHGADSQAWITLRF 125

Query: 130 PR------------------------------------------PAVNSGIEEIPRVRIT 189
           PR                                          PA +S I  +P V++T
Sbjct: 126 PRPTPAPRPISPPQNMVPPTNDTDTLLDDFIDGMIQNNNRPGPPPAASSAIAALPMVKLT 185

Query: 190 GKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDE 224
             HL  D NC ICK+EFE+  E RELPC HFYHSDC+IPWLRMHNTCPVCRY L+ +   
Sbjct: 186 QTHLGSDPNCPICKDEFELDMEARELPCNHFYHSDCIIPWLRMHNTCPVCRYELQGVVTP 245

[Close]
BLAST of Csa3G214060 vs. TrEMBL
Match: D7KW89_ARALL (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475935 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.7e-32
Identity = 93/244 (38.11%), Postives = 122/244 (50.00%), Query Frame = 1 

Query: 10  RSRVVVNGGFTRTTNMHYYWCRICRRIIRI---SLGNPLEISITCPFCSR--NLRHELDV 69
           R RV+VNG   RT   HY++CR C R IR+    L  P+     CPFCSR  NL  ELD+
Sbjct: 6   RPRVIVNGT-RRTRTFHYFYCRHCSRTIRLRSFGLYGPI-----CPFCSREINLHDELDI 65

Query: 70  ARAR--------NFPRLPAISPPIVQRWGFEE----TDASWITLQ-----FPRPAVNSGI 129
            R          ++  L  I+PP   R+  ++    TD  +  +       P PA  S I
Sbjct: 66  MRPSRPYWDTDTDWITLHLINPPRSNRFNRDDLVYNTDEEFADVMPSVQIGPPPASQSAI 125

Query: 130 EEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCR 189
           E +  V IT + L K+  CAICKEEFE+GEE +EL C H YHS C++ WL +HNTCP+CR
Sbjct: 126 EAVRTVTITEEDLAKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICR 185

Query: 190 YTLENIG------DEGSGSGFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDW 226
           + + N+G      DEG     +  R   FR                 VC  WP R++ DW
Sbjct: 186 FEV-NLGVPESNVDEGGSHHVDNDRTNRFRTR---------------VCSLWPLRMMIDW 227

[Close]
BLAST of Csa3G214060 vs. TAIR10
Match: AT1G68180.1 (AT1G68180.1 RING/U-box superfamily protein)

HSP 1 Score: 145.2 bits (365), Expect = 5.4e-35
Identity = 92/244 (37.70%), Postives = 119/244 (48.77%), Query Frame = 1 

Query: 10  RSRVVVNGGFTRTTNMHYYWCRICRRIIRI---SLGNPLEISITCPFCSR--NLRHELDV 69
           R RV+VNG   RT   HY++CR C R IR+    L  P+     CPFCSR  NL  ELD+
Sbjct: 6   RPRVIVNGT-RRTRTFHYFYCRHCSRTIRLRSFGLYGPI-----CPFCSREINLHDELDI 65

Query: 70  ARAR--------NFPRLPAISPPIVQRWGFEE----TDASWITLQ-----FPRPAVNSGI 129
            R          ++  L  I+ P   R+  ++    TD  +  +       P PA  S I
Sbjct: 66  MRPSRPYWDSDTDWITLHLINEPRSNRFNHDDLVYNTDEEFADVMPSVQIGPPPASQSAI 125

Query: 130 EEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCR 189
           E +  V IT + L K+  CAICKEEFE+GEE +EL C H YHS C++ WL +HNTCP+CR
Sbjct: 126 EAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICR 185

Query: 190 YTLENIG------DEGSGSGFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDW 226
           + + N+G      DEG     +  R   FR                 VC  WP R++ DW
Sbjct: 186 FEV-NLGVSESNVDEGGSYNIDNDRSNRFRTR---------------VCSLWPLRMMIDW 227

[Close]
BLAST of Csa3G214060 vs. TAIR10
Match: AT3G56580.2 (AT3G56580.2 RING/U-box superfamily protein)

HSP 1 Score: 109.8 bits (273), Expect = 2.5e-24
Identity = 52/119 (43.70%), Postives = 69/119 (57.98%), Query Frame = 1 

Query: 99  PRPAVNSGIEEIPRVRITGKHLEK-DSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWL 158
           P PA  S I+ +P ++IT KHL+  DS+C +CK+EFE+  E +++PC H YHSDC++PWL
Sbjct: 158 PPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWL 217

Query: 159 RMHNTCPVCRYTLENIGDEGSGSGFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFR 217
             HN+CPVCR  L + G   S       +  + R     E  RR N + NL    WPFR
Sbjct: 218 VQHNSCPVCRKELPSRGSSSS------TQSSQNRSTNGRENSRRRNIFSNL----WPFR 266

[Close]
BLAST of Csa3G214060 vs. TAIR10
Match: AT2G40830.2 (AT2G40830.2 RING-H2 finger C1A)

HSP 1 Score: 109.4 bits (272), Expect = 3.3e-24
Identity = 55/137 (40.15%), Postives = 72/137 (52.55%), Query Frame = 1 

Query: 86  FEETDASWITLQFPRPAVNSGIEEIPRVRITGKHLEK-DSNCAICKEEFEMGEEVRELPC 145
           FE+  A   T + P PA  S I+ +P ++I  +HL   DSNC +CK+EFE+G E +++PC
Sbjct: 150 FEQLSAG-TTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPC 209

Query: 146 KHFYHSDCVIPWLRMHNTCPVCRYTLENI-GDEGSGSGFNGGRGEEFREEEEEEGER-RG 205
            H YHSDC++PWL  HN+CPVCR  L +  G   S +     R             R  G
Sbjct: 210 NHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENG 269

Query: 206 NGWWNLVCCWWPFRLVG 220
           N   N    +WPFR  G
Sbjct: 270 NERRNPFSSFWPFRSSG 285

[Close]
BLAST of Csa3G214060 vs. TAIR10
Match: AT3G10815.1 (AT3G10815.1 RING/U-box superfamily protein)

HSP 1 Score: 99.4 bits (246), Expect = 3.4e-21
Identity = 67/219 (30.59%), Postives = 91/219 (41.55%), Query Frame = 1 

Query: 20  TRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHEL----------------D 79
           TR  N H  WC  CRR I +      E +  C +C       L                +
Sbjct: 4   TRRKNTH--WCHTCRRGIHLQGEGRREGA--CIYCGNTFLERLYENVELSPFDLFGLAYE 63

Query: 80  VARARNFPRLPAISPPIVQRWGFEETDASWITLQF---PRPAVNSGIEEIPRVRITGKHL 139
            AR R   R   I     ++  FEE       LQ    P PA  + I  + +++I  KHL
Sbjct: 64  EARNRRNNRRSVIG----EQLSFEELFNRLPALQDRRGPPPASLAAINSLQKIKIRQKHL 123

Query: 140 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 199
             D  C +C+++FE+G + R++PCKH YHS+C++PWL   NTCPVCR             
Sbjct: 124 GLDPYCPVCQDQFEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCR------------- 183

Query: 200 GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVG 220
                     +E  ++    R N  W+L    WPFR  G
Sbjct: 184 ----------KELPQDRNNSRKNPLWHL----WPFRSSG 187

[Close]
BLAST of Csa3G214060 vs. TAIR10
Match: AT3G46620.1 (AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-20
Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 1 

Query: 101 PAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMH 160
           PA  S IE +PRV I+  H + ++NCA+C E FE G E RE+PCKH +H DC++PWL + 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIR 249

Query: 161 NTCPVCRYTL 171
           N+CPVCR+ L
Sbjct: 250 NSCPVCRFEL 259

[Close]
BLAST of Csa3G214060 vs. NCBI nr
Match: gi|700202433|gb|KGN57566.1| (hypothetical protein Csa_3G214060 [Cucumis sativus])

HSP 1 Score: 543.5 bits (1399), Expect = 1.9e-151
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1 

Query: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVERK 240
           GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVERK
Sbjct: 181 GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVERK 240

Query: 241 RWMELGNKI 250
           RWMELGNKI
Sbjct: 241 RWMELGNKI 249

[Close]
BLAST of Csa3G214060 vs. NCBI nr
Match: gi|449464484|ref|XP_004149959.1| (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus])

HSP 1 Score: 524.2 bits (1349), Expect = 1.2e-145
Identity = 240/243 (98.77%), Postives = 240/243 (98.77%), Query Frame = 1 

Query: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVERK 240
           GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVE  
Sbjct: 181 GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVEPG 240

Query: 241 RWM 244
            WM
Sbjct: 241 SWM 243

[Close]
BLAST of Csa3G214060 vs. NCBI nr
Match: gi|778680175|ref|XP_011651263.1| (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus])

HSP 1 Score: 523.5 bits (1347), Expect = 2.1e-145
Identity = 241/243 (99.18%), Postives = 241/243 (99.18%), Query Frame = 1 

Query: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVERK 240
           GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVER 
Sbjct: 181 GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVERS 240

Query: 241 RWM 244
            WM
Sbjct: 241 -WM 242

[Close]
BLAST of Csa3G214060 vs. NCBI nr
Match: gi|778680186|ref|XP_011651266.1| (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X3 [Cucumis sativus])

HSP 1 Score: 520.0 bits (1338), Expect = 2.3e-144
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1 

Query: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVE 239
           GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVE
Sbjct: 181 GFNGGRGEEFREEEEEEGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFAVE 238

[Close]
BLAST of Csa3G214060 vs. NCBI nr
Match: gi|659112139|ref|XP_008456082.1| (PREDICTED: uncharacterized protein LOC103496124 isoform X1 [Cucumis melo])

HSP 1 Score: 500.7 bits (1288), Expect = 1.4e-138
Identity = 229/247 (92.71%), Postives = 233/247 (94.33%), Query Frame = 1 

Query: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSR+VVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLP ISPPIVQRWGFE+TD SWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGEEFREEEEE----EGERRGNGWWNLVCCWWPFRLVGDWARRLRFADSGDSFFA 240
           GFNGGRGEE  EEEEE    EGE RGNGWWNLVCCWWP RL+GDWARRLRFADSGDSFF 
Sbjct: 181 GFNGGRGEELGEEEEEEEEGEGEGRGNGWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV 240

Query: 241 VERKRWM 244
           VE   WM
Sbjct: 241 VEPGSWM 247

The following BLAST results are available for this feature:
BLAST of Csa3G214060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RHC1A_ARATH5.8e-2340.15Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2... [more]
RDUF1_ARATH2.3e-1954.29E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1[more]
RNG1L_ARATH3.0e-1941.41E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
RDUF2_ARATH3.9e-1948.19E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1[more]
R126A_XENLA6.7e-1944.00E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1[more]
BLAST of Csa3G214060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC10_CUCSA1.3e-151100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214060 PE=4 SV=1[more]
V7BR96_PHAVU2.4e-3937.73Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G213500g PE=4 SV=1[more]
A0A0L9VH95_PHAAN3.9e-3433.68Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g270800 PE=4 SV=1[more]
A0A0S3S1U9_PHAAN3.9e-3433.68Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G009900 PE=... [more]
D7KW89_ARALL3.7e-3238.11Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475... [more]
BLAST of Csa3G214060 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68180.15.4e-3537.70 RING/U-box superfamily protein[more]
AT3G56580.22.5e-2443.70 RING/U-box superfamily protein[more]
AT2G40830.23.3e-2440.15 RING-H2 finger C1A[more]
AT3G10815.13.4e-2130.59 RING/U-box superfamily protein[more]
AT3G46620.11.3e-2054.29 zinc finger (C3HC4-type RING finger) family protein[more]
BLAST of Csa3G214060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202433|gb|KGN57566.1|1.9e-151100.00hypothetical protein Csa_3G214060 [Cucumis sativus][more]
gi|449464484|ref|XP_004149959.1|1.2e-14598.77PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus][more]
gi|778680175|ref|XP_011651263.1|2.1e-14599.18PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus][more]
gi|778680186|ref|XP_011651266.1|2.3e-144100.00PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X3 [Cucumis sativus][more]
gi|659112139|ref|XP_008456082.1|1.4e-13892.71PREDICTED: uncharacterized protein LOC103496124 isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G214060.1Csa3G214060.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 125..167
score: 7.8
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 126..166
score: 3.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 126..167
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 121..170
score: 2.7
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 10..207
score: 2.1
NoneNo IPR availablePANTHERPTHR22763:SF39RING/U-BOX DOMAIN-CONTAINING PROTEINcoord: 10..207
score: 2.1
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 107..171
score: 5.42

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G214060Cla013043Watermelon (97103) v1cuwmB237
Csa3G214060MELO3C019481Melon (DHL92) v3.5.1cumeB163
Csa3G214060ClCG05G009740Watermelon (Charleston Gray)cuwcgB224
Csa3G214060Lsi05G001870Bottle gourd (USVL1VR-Ls)culsiB202
Csa3G214060MELO3C019481.2Melon (DHL92) v3.6.1cumedB232
Csa3G214060Cla97C05G092100Watermelon (97103) v2cuwmbB206
Csa3G214060Bhi01G001227Wax gourdcuwgoB280
Csa3G214060CSPI03G18810Wild cucumber (PI 183967)cpicuB120
Csa3G214060Cucsa.049550Cucumber (Gy14) v1cgycuB029
Csa3G214060CmaCh04G005160Cucurbita maxima (Rimu)cmacuB697
Csa3G214060CmoCh04G005550Cucurbita moschata (Rifu)cmocuB696
Csa3G214060Cp4.1LG01g02150Cucurbita pepo (Zucchini)cpecuB389
Csa3G214060CsGy3G018660Cucumber (Gy14) v2cgybcuB109
Csa3G214060Carg26428Silver-seed gourdcarcuB0064
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G214060Melon (DHL92) v3.6.1cumedB238
Csa3G214060Silver-seed gourdcarcuB0400
Csa3G214060Silver-seed gourdcarcuB0675
Csa3G214060Watermelon (97103) v2cuwmbB215
Csa3G214060Wax gourdcuwgoB283
Csa3G214060Cucurbita maxima (Rimu)cmacuB320
Csa3G214060Cucurbita maxima (Rimu)cmacuB331
Csa3G214060Cucurbita maxima (Rimu)cmacuB705
Csa3G214060Cucurbita moschata (Rifu)cmocuB307
Csa3G214060Cucurbita moschata (Rifu)cmocuB320
Csa3G214060Cucurbita moschata (Rifu)cmocuB687
Csa3G214060Melon (DHL92) v3.5.1cumeB166
Csa3G214060Watermelon (Charleston Gray)cuwcgB230
Csa3G214060Watermelon (97103) v1cuwmB243
Csa3G214060Cucurbita pepo (Zucchini)cpecuB205
Csa3G214060Cucurbita pepo (Zucchini)cpecuB217
Csa3G214060Cucurbita pepo (Zucchini)cpecuB395
Csa3G214060Bottle gourd (USVL1VR-Ls)culsiB211