MELO3C019481.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C019481.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionE3 ubiquitin-protein ligase RING1-like
Locationchr06 : 11469475 .. 11471105 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGTCGGATACCCATTTAGACCCTCAAAAGCTATTTATCCGAACTTCTATTAAACTTCTGCGCACGTGGGTGCGCCTCTCGCATAGGCGATTGGGCATTAAAAACTCTTCAAACTTTTGCAGATTCACATCCAAAAACAATGCTATTTATCGAAAACATTTTATGAAACCATCCCTCAAAAGCTACCTTCATCTTCTCCATCCTCTTCATCTCTTCAAACTTTTGCAGATTCATATCCATCAAACCACACATTCACAACCTAATAAGTCTTCAATGCAAAGCTTTCATTTCTTTAGTTAAAAGTGCAAAAAAGTATCAACAAACCACAAAAACAGAGCTTGAACAACAACAAGAAACTCCAATTCAATTTCCCTTTCTTCCACGACAACTTCTTTTGTAATCTTATGTTCAAACAAAATCCAAGTTACGACAAGGAATAACTTTCCCATCACTTCTCTTCCTCCGTTTCCCTATATCATCCTCTCTTTCTTCCTTTCTCAATACATGTCCATTAAACCTTCAATTCTTAGAGTATGTCCATCCCCCAGCCTCAAAACCCCCGATCTCGAATCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCTAGGGCTCGAAATTTCCCTCGTCTCCCCCCGATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGATACCGATGAGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATAGAGGAGATTCCAAGGGTGAGAATTACGGGAAAGCATTTGGAGAAGGATTCGAACTGTGCGATTTGTAAGGAGGAATTTGAAATGGGAGAGGAAGTTAGGGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGCGTTGTTCCTTGGTTGAGAATGCATAATACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAACTCGGGGAAGAAGAAGAAGAAGAAGAAGAAGGCGAAGGCGAAGGAAGAGGGAATGGATGGTGGAACTTGGTGTGTTGTTGGTGGCCGCTCCGTTTAATAGGCGATTGGGCTCGCCGTCTCCGGTTTGCTGATTCGGGTGATAGTTTCTTCGTCGTTGAACGTAAGGTTTTTTCTTTTCAAGTTTCTTCATCTTCATCTATGGATGGAGTTGGGAATCAAAATAAAAATAACAAACCATTTCTTATAATCAAAATGAAATTGTTTAGATTATTACCATTTTTCTTTTACCAAATATTTATTTCATTTTTTCAAATTTTAAAAATTTGCCTAAATTTAAATTTAGAAAATTATAAAAAAAAATAGAACCTTTAAAATGGAAAACACAGATAAAACATTTCATGTCGTAAACATCTTATAAAATATGAGAAATCAAGTAAAACAAATTGTTTGTCAAATTTTTCTATCTTTTAGAAAATATCTTTAAATTTTATATTTAATTTTGTAATTTTAGATCAGATACGTATATTTAA

mRNA sequence

TGGGTCGGATACCCATTTAGACCCTCAAAAGCTATTTATCCGAACTTCTATTAAACTTCTGCGCACGTGGGTGCGCCTCTCGCATAGGCGATTGGGCATTAAAAACTCTTCAAACTTTTGCAGATTCACATCCAAAAACAATGCTATTTATCGAAAACATTTTATGAAACCATCCCTCAAAAGCTACCTTCATCTTCTCCATCCTCTTCATCTCTTCAAACTTTTGCAGATTCATATCCATCAAACCACACATTCACAACCTAATAAGTCTTCAATGCAAAGCTTTCATTTCTTTAGTTAAAAGTGCAAAAAAGTATCAACAAACCACAAAAACAGAGCTTGAACAACAACAAGAAACTCCAATTCAATTTCCCTTTCTTCCACGACAACTTCTTTTGTAATCTTATGTTCAAACAAAATCCAAGTTACGACAAGGAATAACTTTCCCATCACTTCTCTTCCTCCGTTTCCCTATATCATCCTCTCTTTCTTCCTTTCTCAATACATGTCCATTAAACCTTCAATTCTTAGAGTATGTCCATCCCCCAGCCTCAAAACCCCCGATCTCGAATCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCTAGGGCTCGAAATTTCCCTCGTCTCCCCCCGATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGATACCGATGAGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATAGAGGAGATTCCAAGGGTGAGAATTACGGGAAAGCATTTGGAGAAGGATTCGAACTGTGCGATTTGTAAGGAGGAATTTGAAATGGGAGAGGAAGTTAGGGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGCGTTGTTCCTTGGTTGAGAATGCATAATACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAACTCGGGGAAGAAGAAGAAGAAGAAGAAGAAGGCGAAGGCGAAGGAAGAGGGAATGGATGGTGGAACTTGGTGTGTTGTTGGTGGCCGCTCCGTTTAATAGGCGATTGGGCTCGCCGTCTCCGGTTTGCTGATTCGGGTGATAGTTTCTTCGTCGTTGAACATACGTATATTTAA

Coding sequence (CDS)

ATGTCCATCCCCCAGCCTCAAAACCCCCGATCTCGAATCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCTAGGGCTCGAAATTTCCCTCGTCTCCCCCCGATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGATACCGATGAGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATAGAGGAGATTCCAAGGGTGAGAATTACGGGAAAGCATTTGGAGAAGGATTCGAACTGTGCGATTTGTAAGGAGGAATTTGAAATGGGAGAGGAAGTTAGGGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGCGTTGTTCCTTGGTTGAGAATGCATAATACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAACTCGGGGAAGAAGAAGAAGAAGAAGAAGAAGGCGAAGGCGAAGGAAGAGGGAATGGATGGTGGAACTTGGTGTGTTGTTGGTGGCCGCTCCGTTTAATAGGCGATTGGGCTCGCCGTCTCCGGTTTGCTGATTCGGGTGATAGTTTCTTCGTCGTTGAACATACGTATATTTAA

Protein sequence

MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGSGFNGGRGEELGEEEEEEEEGEGEGRGNGWWNLVCCWWPLRLIGDWARRLRFADSGDSFFVVEHTYI
BLAST of MELO3C019481.2 vs. NCBI nr
Match: XP_008456082.1 (PREDICTED: uncharacterized protein LOC103496124 [Cucumis melo])

HSP 1 Score: 463.4 bits (1191), Expect = 4.9e-127
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0

Query: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSXX 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSXX
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV 240

Query: 241 VE 243
           VE
Sbjct: 241 VE 242

BLAST of MELO3C019481.2 vs. NCBI nr
Match: XP_011651263.1 (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus] >XP_011651264.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus] >XP_011651265.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus])

HSP 1 Score: 416.8 bits (1070), Expect = 5.2e-113
Identity = 211/246 (85.77%), Postives = 218/246 (88.62%), Query Frame = 0

Query: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSR+VVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLP ISPPIVQRWGFE+TD SWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSXX 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGS  
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGS-- 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV 240
                       XXXXXXXXXXXXXXXX         P RL+GDWARRLRFADSGDSFF 
Sbjct: 181 --GSGFNGGRGEXXXXXXXXXXXXXXXXXXXXXXXXXPFRLVGDWARRLRFADSGDSFFA 240

Query: 241 VEHTYI 247
           VE +++
Sbjct: 241 VERSWM 242

BLAST of MELO3C019481.2 vs. NCBI nr
Match: XP_004149959.1 (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651258.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651259.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651260.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651261.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651262.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus])

HSP 1 Score: 415.2 bits (1066), Expect = 1.5e-112
Identity = 211/242 (87.19%), Postives = 215/242 (88.84%), Query Frame = 0

Query: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSR+VVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLP ISPPIVQRWGFE+TD SWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSXX 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGS  
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGS-- 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV 240
                       XXXXXXXXXXXXXXXX         P RL+GDWARRLRFADSGDSFF 
Sbjct: 181 --GSGFNGGRGEXXXXXXXXXXXXXXXXXXXXXXXXXPFRLVGDWARRLRFADSGDSFFA 238

Query: 241 VE 243
           VE
Sbjct: 241 VE 238

BLAST of MELO3C019481.2 vs. NCBI nr
Match: KGN57566.1 (hypothetical protein Csa_3G214060 [Cucumis sativus])

HSP 1 Score: 415.2 bits (1066), Expect = 1.5e-112
Identity = 211/242 (87.19%), Postives = 215/242 (88.84%), Query Frame = 0

Query: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSR+VVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLP ISPPIVQRWGFE+TD SWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSXX 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGS  
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGS-- 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV 240
                       XXXXXXXXXXXXXXXX         P RL+GDWARRLRFADSGDSFF 
Sbjct: 181 --GSGFNGGRGEXXXXXXXXXXXXXXXXXXXXXXXXXPFRLVGDWARRLRFADSGDSFFA 238

Query: 241 VE 243
           VE
Sbjct: 241 VE 238

BLAST of MELO3C019481.2 vs. NCBI nr
Match: XP_011651266.1 (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X3 [Cucumis sativus])

HSP 1 Score: 415.2 bits (1066), Expect = 1.5e-112
Identity = 211/242 (87.19%), Postives = 215/242 (88.84%), Query Frame = 0

Query: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSR+VVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLP ISPPIVQRWGFE+TD SWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSXX 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGS  
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGS-- 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV 240
                       XXXXXXXXXXXXXXXX         P RL+GDWARRLRFADSGDSFF 
Sbjct: 181 --GSGFNGGRGEXXXXXXXXXXXXXXXXXXXXXXXXXPFRLVGDWARRLRFADSGDSFFA 238

Query: 241 VE 243
           VE
Sbjct: 241 VE 238

BLAST of MELO3C019481.2 vs. TAIR10
Match: AT1G68180.1 (RING/U-box superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-34
Identity = 92/248 (37.10%), Postives = 120/248 (48.39%), Query Frame = 0

Query: 10  RSRIVVNGGFTRTTNMHYYWCRICRRIIRI---SLGNPLEISITCPFCSR--NLRHELDV 69
           R R++VN G  RT   HY++CR C R IR+    L  P+     CPFCSR  NL  ELD+
Sbjct: 6   RPRVIVN-GTRRTRTFHYFYCRHCSRTIRLRSFGLYGPI-----CPFCSREINLHDELDI 65

Query: 70  ARA--------RNFPRLPPISPPIVQRWGFED----TDESWITLQ-----FPRPAVNSGI 129
            R          ++  L  I+ P   R+  +D    TDE +  +       P PA  S I
Sbjct: 66  MRPSRPYWDSDTDWITLHLINEPRSNRFNHDDLVYNTDEEFADVMPSVQIGPPPASQSAI 125

Query: 130 EEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCR 189
           E +  V IT + L K+  CAICKEEFE+GEE +EL C H YHS C+V WL +HNTCP+CR
Sbjct: 126 EAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICR 185

Query: 190 YTLENIG------DEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRL 230
           + + N+G      DEG                               +   VC  WPLR+
Sbjct: 186 FEV-NLGVSESNVDEGG-------------------SYNIDNDRSNRFRTRVCSLWPLRM 227

BLAST of MELO3C019481.2 vs. TAIR10
Match: AT2G40830.2 (RING-H2 finger C1A)

HSP 1 Score: 106.3 bits (264), Expect = 2.7e-23
Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0

Query: 95  TLQFPRPAVNSGIEEIPRVRITGKHL-EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV 154
           T + P PA  S I+ +P ++I  +HL   DSNC +CK+EFE+G E +++PC H YHSDC+
Sbjct: 158 TRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCI 217

Query: 155 VPWLRMHNTCPVCRYTLENIGDEGS 179
           VPWL  HN+CPVCR  L +     S
Sbjct: 218 VPWLVQHNSCPVCRQELPSASGPSS 242

BLAST of MELO3C019481.2 vs. TAIR10
Match: AT3G56580.2 (RING/U-box superfamily protein)

HSP 1 Score: 105.5 bits (262), Expect = 4.7e-23
Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 0

Query: 99  PRPAVNSGIEEIPRVRITGKHLE-KDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWL 158
           P PA  S I+ +P ++IT KHL+  DS+C +CK+EFE+  E +++PC H YHSDC+VPWL
Sbjct: 158 PPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWL 217

Query: 159 RMHNTCPVCRYTLENIGDEGS 179
             HN+CPVCR  L + G   S
Sbjct: 218 VQHNSCPVCRKELPSRGSSSS 238

BLAST of MELO3C019481.2 vs. TAIR10
Match: AT3G10815.1 (RING/U-box superfamily protein)

HSP 1 Score: 101.3 bits (251), Expect = 8.8e-22
Identity = 55/170 (32.35%), Postives = 80/170 (47.06%), Query Frame = 0

Query: 20  TRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHEL----------------D 79
           T T   + +WC  CRR I +      E +  C +C       L                +
Sbjct: 2   TTTRRKNTHWCHTCRRGIHLQGEGRREGA--CIYCGNTFLERLYENVELSPFDLFGLAYE 61

Query: 80  VARARNFPRLPPISPPIVQRWGFEDTDESWITLQ---FPRPAVNSGIEEIPRVRITGKHL 139
            AR R   R   I     ++  FE+       LQ    P PA  + I  + +++I  KHL
Sbjct: 62  EARNRRNNRRSVIG----EQLSFEELFNRLPALQDRRGPPPASLAAINSLQKIKIRQKHL 121

Query: 140 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTL 171
             D  C +C+++FE+G + R++PCKH YHS+C++PWL   NTCPVCR  L
Sbjct: 122 GLDPYCPVCQDQFEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCRKEL 165

BLAST of MELO3C019481.2 vs. TAIR10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-21
Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 0

Query: 101 PAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMH 160
           PA  S IE +PRV I+  H + ++NCA+C E FE G E RE+PCKH +H DC+VPWL + 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIR 249

Query: 161 NTCPVCRYTL 171
           N+CPVCR+ L
Sbjct: 250 NSCPVCRFEL 259

BLAST of MELO3C019481.2 vs. Swiss-Prot
Match: sp|O22197|RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.9e-22
Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0

Query: 95  TLQFPRPAVNSGIEEIPRVRITGKHL-EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV 154
           T + P PA  S I+ +P ++I  +HL   DSNC +CK+EFE+G E +++PC H YHSDC+
Sbjct: 158 TRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCI 217

Query: 155 VPWLRMHNTCPVCRYTLENIGDEGS 179
           VPWL  HN+CPVCR  L +     S
Sbjct: 218 VPWLVQHNSCPVCRQELPSASGPSS 242

BLAST of MELO3C019481.2 vs. Swiss-Prot
Match: sp|Q94AK4|RZF1_ARATH (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.4e-22
Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 0

Query: 99  PRPAVNSGIEEIPRVRITGKHLE-KDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWL 158
           P PA  S I+ +P ++IT KHL+  DS+C +CK+EFE+  E +++PC H YHSDC+VPWL
Sbjct: 158 PPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWL 217

Query: 159 RMHNTCPVCRYTLENIGDEGS 179
             HN+CPVCR  L + G   S
Sbjct: 218 VQHNSCPVCRKELPSRGSSSS 238

BLAST of MELO3C019481.2 vs. Swiss-Prot
Match: sp|Q7T0Q3|R126A_XENLA (E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis OX=8355 GN=rnf126-a PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-20
Identity = 43/100 (43.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query: 77  SPPIVQRWGFE--DTDESWITLQF----PRPAVNSGIEEIPRVRITGKHLEKDSNCAICK 136
           S P+   WG    DT  + +  QF    P PA N  I+ +P ++IT +H+     C +CK
Sbjct: 173 SNPMDYAWGANGLDTIITQLLNQFENTGPPPADNEKIQALPTIQITEEHVGSGLECPVCK 232

Query: 137 EEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTL 171
           E++ +GE VR+LPC H +H+DC++PWL  H+TCPVCR +L
Sbjct: 233 EDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272

BLAST of MELO3C019481.2 vs. Swiss-Prot
Match: sp|Q9SNB6|RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.5e-20
Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 0

Query: 101 PAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMH 160
           PA  S IE +PRV I+  H + ++NCA+C E FE G E RE+PCKH +H DC+VPWL + 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIR 249

Query: 161 NTCPVCRYTL 171
           N+CPVCR+ L
Sbjct: 250 NSCPVCRFEL 259

BLAST of MELO3C019481.2 vs. Swiss-Prot
Match: sp|Q6DIP3|RN126_XENTR (E3 ubiquitin-protein ligase RNF126 OS=Xenopus tropicalis OX=8364 GN=rnf126 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.6e-20
Identity = 42/100 (42.00%), Postives = 62/100 (62.00%), Query Frame = 0

Query: 77  SPPIVQRWGFE--DTDESWITLQF----PRPAVNSGIEEIPRVRITGKHLEKDSNCAICK 136
           S P+   WG    DT  + +  QF    P PA    I+ +P ++IT +H+     C +CK
Sbjct: 172 SNPMDYAWGANGLDTIITQLLNQFENTGPPPADTEKIQALPTIQITEEHVGSGLECPVCK 231

Query: 137 EEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTL 171
           E++ +GE VR+LPC H +H+DC++PWL  H+TCPVCR +L
Sbjct: 232 EDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271

BLAST of MELO3C019481.2 vs. TrEMBL
Match: tr|A0A1S3C2I0|A0A1S3C2I0_CUCME (uncharacterized protein LOC103496124 OS=Cucumis melo OX=3656 GN=LOC103496124 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 3.2e-127
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0

Query: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSXX 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSXX
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV 240

Query: 241 VE 243
           VE
Sbjct: 241 VE 242

BLAST of MELO3C019481.2 vs. TrEMBL
Match: tr|A0A0A0LC10|A0A0A0LC10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214060 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.0e-112
Identity = 211/242 (87.19%), Postives = 215/242 (88.84%), Query Frame = 0

Query: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSR+VVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLP ISPPIVQRWGFE+TD SWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSXX 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGS  
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGS-- 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWWNLVCCWWPLRLIGDWARRLRFADSGDSFFV 240
                       XXXXXXXXXXXXXXXX         P RL+GDWARRLRFADSGDSFF 
Sbjct: 181 --GSGFNGGRGEXXXXXXXXXXXXXXXXXXXXXXXXXPFRLVGDWARRLRFADSGDSFFA 238

Query: 241 VE 243
           VE
Sbjct: 241 VE 238

BLAST of MELO3C019481.2 vs. TrEMBL
Match: tr|V7BR96|V7BR96_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G213500g PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.8e-38
Identity = 86/223 (38.57%), Postives = 113/223 (50.67%), Query Frame = 0

Query: 10  RSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARARN 69
           RSR+VVN G  RT   HY+WC  C+R +R+   N       CP+C  +LR+ELD++R R 
Sbjct: 65  RSRVVVN-GVRRTRTFHYFWCLYCQRTVRLPFTN--SDGSICPYCFHHLRYELDISRPRL 124

Query: 70  FPRLP-----------------PISPPI----------VQRWGFEDTDES----WITLQF 129
              +P                  + PP+            +W  E+   S    WITL+F
Sbjct: 125 LMNVPNNLQPSPATQLLDSLALVLDPPLRRQNNNHFNTTTQWETENEHGSDHHAWITLRF 184

Query: 130 PR----------------------------PAVNSGIEEIPRVRITGKHLEKDSNCAICK 174
           PR                            PA +S I  +P V++T  HL  D NC +CK
Sbjct: 185 PRPTRADRPIFSDDDFINGVIENSNRTRPPPAASSAISALPVVKLTQAHLASDPNCPVCK 244

BLAST of MELO3C019481.2 vs. TrEMBL
Match: tr|K7M9N3|K7M9N3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100785893 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 8.1e-38
Identity = 97/299 (32.44%), Postives = 127/299 (42.47%), Query Frame = 0

Query: 10  RSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARARN 69
           R RIVVN G  RT   HY+WC  C+R +R+   N      TCP+C   LR+ELD++R R 
Sbjct: 6   RPRIVVN-GVRRTRTFHYFWCLYCQRTVRLPFTN--NDGSTCPYCFHQLRYELDISRPRL 65

Query: 70  FPRLPP-----------------ISPPI----------VQRWGFEDTD----ESWITLQF 129
              +P                  + PP+             W  E+ D    ++WITL+F
Sbjct: 66  LMNVPNNLEPSQATQLMHNLALILDPPLRRQNNNHLNTTPHWETENEDGLNPQAWITLRF 125

Query: 130 PR-------------------------------------------------PAVNSGIEE 189
           PR                                                 PA +S I  
Sbjct: 126 PRPTXXXXXXXXXXXXXXXXXDTDHDTLFENTILDDFIDGVIQNNNRPGPPPATSSAIAA 185

Query: 190 IPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYT 228
           +P V++T  HL  D NC ICK+EFE+  E RELPCKHFYHSDC++PWLRMHNTCPVCRY 
Sbjct: 186 LPMVKLTQTHLASDPNCPICKDEFELDMEARELPCKHFYHSDCIIPWLRMHNTCPVCRYE 245

BLAST of MELO3C019481.2 vs. TrEMBL
Match: tr|A0A151T7Z5|A0A151T7Z5_CAJCA (RING finger protein 115 family OS=Cajanus cajan OX=3821 GN=KK1_017722 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 8.1e-38
Identity = 97/297 (32.66%), Postives = 129/297 (43.43%), Query Frame = 0

Query: 7   QNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 66
           Q  R RIVVN G  RT   HY+WC  C+R +R+   N  +I   CP+C   LR+ELD++R
Sbjct: 3   QTGRPRIVVN-GVRRTRTFHYFWCLYCQRTVRLPFTNN-DIGSLCPYCFHQLRYELDISR 62

Query: 67  ARNFPRLPP-----------------ISPPI-------VQRWGFED----TDESWITLQF 126
            R    +P                  + PP+         +W  E+    +D  WITL+F
Sbjct: 63  PRLLMNVPNNLEPSPATQLMHGLALILDPPLRXXXXXXXXQWQTEENDGNSDPQWITLRF 122

Query: 127 -----------------------------------------------PRPAVNSGIEEIP 186
                                                          P PA +S I  +P
Sbjct: 123 SRPTRPPRPISPPQNLVPNTTHTLFDENNNTLDEFIDGVIQNNNRPGPPPATSSAIAALP 182

Query: 187 RVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLE 228
            V++T  HL  DSNC+ICK+EFE+  E RELPCKHFYHS+C+VPWLRMHNTCPVCRY L+
Sbjct: 183 MVKLTQAHLASDSNCSICKDEFELDMEARELPCKHFYHSECIVPWLRMHNTCPVCRYELQ 242

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008456082.14.9e-127100.00PREDICTED: uncharacterized protein LOC103496124 [Cucumis melo][more]
XP_011651263.15.2e-11385.77PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus] >XP_0... [more]
XP_004149959.11.5e-11287.19PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_0... [more]
KGN57566.11.5e-11287.19hypothetical protein Csa_3G214060 [Cucumis sativus][more]
XP_011651266.11.5e-11287.19PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X3 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT1G68180.11.5e-3437.10RING/U-box superfamily protein[more]
AT2G40830.22.7e-2349.41RING-H2 finger C1A[more]
AT3G56580.24.7e-2351.85RING/U-box superfamily protein[more]
AT3G10815.18.8e-2232.35RING/U-box superfamily protein[more]
AT3G46620.12.0e-2155.71zinc finger (C3HC4-type RING finger) family protein[more]
Match NameE-valueIdentityDescription
sp|O22197|RHC1A_ARATH4.9e-2249.41Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
sp|Q94AK4|RZF1_ARATH8.4e-2251.85E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV... [more]
sp|Q7T0Q3|R126A_XENLA2.7e-2043.00E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis OX=8355 GN=rnf126-a PE=2 ... [more]
sp|Q9SNB6|RDUF1_ARATH3.5e-2055.71E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ... [more]
sp|Q6DIP3|RN126_XENTR4.6e-2042.00E3 ubiquitin-protein ligase RNF126 OS=Xenopus tropicalis OX=8364 GN=rnf126 PE=2 ... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3C2I0|A0A1S3C2I0_CUCME3.2e-127100.00uncharacterized protein LOC103496124 OS=Cucumis melo OX=3656 GN=LOC103496124 PE=... [more]
tr|A0A0A0LC10|A0A0A0LC10_CUCSA1.0e-11287.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214060 PE=4 SV=1[more]
tr|V7BR96|V7BR96_PHAVU2.8e-3838.57Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G213500g PE=4 ... [more]
tr|K7M9N3|K7M9N3_SOYBN8.1e-3832.44Uncharacterized protein OS=Glycine max OX=3847 GN=100785893 PE=4 SV=1[more]
tr|A0A151T7Z5|A0A151T7Z5_CAJCA8.1e-3832.66RING finger protein 115 family OS=Cajanus cajan OX=3821 GN=KK1_017722 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0016874 ligase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019481.2.1MELO3C019481.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 126..166
e-value: 2.6E-7
score: 40.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 125..167
e-value: 2.1E-13
score: 50.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 126..167
score: 12.357
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 91..172
e-value: 1.1E-21
score: 78.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..204
NoneNo IPR availablePANTHERPTHR44290FAMILY NOT NAMEDcoord: 24..68
coord: 98..222
NoneNo IPR availableCDDcd16667RING-H2_RNF126_likecoord: 126..167
e-value: 2.78055E-23
score: 88.5288
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 107..171