ClCG05G009740 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G009740
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	RING/U-box superfamily protein LENGTH=320
Location	CG_Chr05 : 10777227 .. 10779054 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATGCCTCAAAACCCTCGACCTCGAATCGTCGTCAATGGCGGCTTCCCGAGGACGACCACCATGCATTACTATTGGTGCCGGTTTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTCTAGAAATTTCCATTACTTGCCCTTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCTAGGGCTAGAAATTTCCCTCGTCTCCCCAATTTAGCTGCCGGAAATCGCACGATTTCCCCCCCGATTGTCCCTCAGTGGGGATTCGAAACCGATGAGTCTTGGATCACGCTCCGATTCTCCAGCCCACAGGCTAATTCCGGGATTGAGGCGATTCCGAGGGTGAAAATTACGGAGTACCATTTGGAGAAGGATTCGAATTGTGCGATTTGTAAAGAGGAATTCGAAATCGGAGAGGAAGTAAGGGAGTTGCCTTGCAAGCATTTCTATCATTCGGATTGTGTGGTTCCTTGGTTGAGGATCCATAATACTTGCCCAGTTTGCCGGTATACGTTGGAGAATACCGCCGCCGCTGACGGCGAGGGGAGTGGGAGCGGTTTTAATGCCGGAAGGGGTGAGGAATTCGGGGAAGAAGAAGGAGAAGGAAGAGGGAATGGAGGATGGTGGAATTTGGTGTGTTGTTGGTGGCCATTCCGTTTCATCGGCGATTGGGCTCGCCGCCTCCGGTTTGCTGATTCCGGTGATAGTTTCTTCGTCGTTGAACGTAAGATTTTTTATTTTGAAATTTCTTCATCTATGGATGAAGATAGGGAAGAAAAACAAAACACAAACTACTTTTTAATAATCAAAATGAATGGTTGAAATTATTACAATTATTACTATTAGATTAATTAACACATCAAATATTTGTACTTATTTGGTTCCAAACTTTCAAATTTACCAATTACGTATTTGAATTTTCAATTTTATTTATCTTTATTTGCTAACTATTTGATTTTTTTTTTAATTTTTTTTTAATTTAAAAAACTTAAATTTAATTTTTAAAAATATTAATAAAAAATAGATAACAAAATAAGAAATTTAAAAGTAAAATGAGTGTATAAACTTAATTTTCAAACATTAAAAACCAATAATCCAATAATTATCCAACTGCACTTTAAAAATTATCTTACACATAAAATTTGAATTATTTTTATTTGATATCATTTTGGTTCATGTAATTTGAGAGTTTTCAACTAGTCCCCATATTATCAAATGTATACTTCCTTCTCATTATTAGTTTCTCGTTGATTTTTACAAAAAAATAAAAATAAAAATTTAATGTCTATTAGCATTTTTCATCATAAATTTTGAAAACAAATTCACACACCAAATTTCCTTACATGAAAATTATTGTTATTATTTAATTAAATTCGATAAAAATTAACTTCGAAACTAATTTAAGATTTATTGAAAATTCATGCACTAAAATTGAACCAACCTAAAGTACAAAATTGTTATTTTAACCTTAACCTAATTATTATTTTCTCTTTAAACAAAAAAAAAAAAAAAAACAGAAAGTGACAGAATTCCATGAAGATCCATGTCTTAAGACAACTGGATTTAAAATGACAAAATGGACCATCAATGTCAAACTAGTCAACTTAAAAGTACAAATTTGAGCATCAAAATCATACCAGTCTAGTCAAAATTCGAATCCACAAAAGAAAAACTAAGTAAACTATAACTTAAACAGACAAAAAAAATCAAATTATACACTAAAAAAACAAATAAGTTAATCTAAATATTGAAATATAATGTTAATGTGTACTGGTTGGAGATTGCAGCAGGTTCATGGATGTACTCTTGGCTTGCTAATTAA

mRNA sequence

ATGTCGATGCCTCAAAACCCTCGACCTCGAATCGTCGTCAATGGCGGCTTCCCGAGGACGACCACCATGCATTACTATTGGTGCCGGTTTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTCTAGAAATTTCCATTACTTGCCCTTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCTAGGGCTAGAAATTTCCCTCGTCTCCCCAATTTAGCTGCCGGAAATCGCACGATTTCCCCCCCGATTGTCCCTCAGTGGGGATTCGAAACCGATGAGTCTTGGATCACGCTCCGATTCTCCAGCCCACAGGCTAATTCCGGGATTGAGGCGATTCCGAGGGTGAAAATTACGGAGTACCATTTGGAGAAGGATTCGAATTGTGCGATTTGTAAAGAGGAATTCGAAATCGGAGAGGAAGTAAGGGAGTTGCCTTGCAAGCATTTCTATCATTCGGATTGTGTGGTTCCTTGGTTGAGGATCCATAATACTTGCCCAGTTTGCCGGTATACGTTGGAGAATACCGCCGCCGCTGACGGCGAGGGGAGTGGGAGCGGTTTTAATGCCGGAAGGGGTGAGGAATTCGGGGAAGAAGAAGGAGAAGGAAGAGGGAATGGAGGATGGTGGAATTTGGTGTGTTGTTGGTGGCCATTCCGTTTCATCGGCGATTGGGCTCGCCGCCTCCGGTTTGCTGATTCCGGTGATAGTTTCTTCGTCGTTGAACCAGGTTCATGGATGTACTCTTGGCTTGCTAATTAA

Coding sequence (CDS)

ATGTCGATGCCTCAAAACCCTCGACCTCGAATCGTCGTCAATGGCGGCTTCCCGAGGACGACCACCATGCATTACTATTGGTGCCGGTTTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTCTAGAAATTTCCATTACTTGCCCTTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCTAGGGCTAGAAATTTCCCTCGTCTCCCCAATTTAGCTGCCGGAAATCGCACGATTTCCCCCCCGATTGTCCCTCAGTGGGGATTCGAAACCGATGAGTCTTGGATCACGCTCCGATTCTCCAGCCCACAGGCTAATTCCGGGATTGAGGCGATTCCGAGGGTGAAAATTACGGAGTACCATTTGGAGAAGGATTCGAATTGTGCGATTTGTAAAGAGGAATTCGAAATCGGAGAGGAAGTAAGGGAGTTGCCTTGCAAGCATTTCTATCATTCGGATTGTGTGGTTCCTTGGTTGAGGATCCATAATACTTGCCCAGTTTGCCGGTATACGTTGGAGAATACCGCCGCCGCTGACGGCGAGGGGAGTGGGAGCGGTTTTAATGCCGGAAGGGGTGAGGAATTCGGGGAAGAAGAAGGAGAAGGAAGAGGGAATGGAGGATGGTGGAATTTGGTGTGTTGTTGGTGGCCATTCCGTTTCATCGGCGATTGGGCTCGCCGCCTCCGGTTTGCTGATTCCGGTGATAGTTTCTTCGTCGTTGAACCAGGTTCATGGATGTACTCTTGGCTTGCTAATTAA

Protein sequence

MSMPQNPRPRIVVNGGFPRTTTMHYYWCRFCRRIIRISLGNPLEISITCPFCSRNLRHELDVARARNFPRLPNLAAGNRTISPPIVPQWGFETDESWITLRFSSPQANSGIEAIPRVKITEYHLEKDSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENTAAADGEGSGSGFNAGRGEEFGEEEGEGRGNGGWWNLVCCWWPFRFIGDWARRLRFADSGDSFFVVEPGSWMYSWLAN

Homology

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BLAST of ClCG05G009740 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-22
Identity = 53/136 (38.97%), Postives = 69/136 (50.74%), Query Frame = 1


Query: 91  FETDESWITLRFSSPQANSGIEAIPRVKITEYHLEK-DSNCAICKEEFEIGEEVRELPCK 150
           FE   +  T R   P   S I+A+P +KI + HL   DSNC +CK+EFE+G E +++PC 
Sbjct: 150 FEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCN 209

Query: 151 HFYHSDCVVPWLRIHNTCPVCRYTLENTAAADGEGSGSGFNAGRGEEFGEEEGEGRGNGG 210
           H YHSDC+VPWL  HN+CPVCR  L + +      + +                 R NG 
Sbjct: 210 HIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN 269

Query: 211 -WWNLVCCWWPFRFIG 225
              N    +WPFR  G
Sbjct: 270 ERRNPFSSFWPFRSSG 285

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BLAST of ClCG05G009740 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.2e-21
Identity = 48/127 (37.80%), Postives = 75/127 (59.06%), Query Frame = 1


Query: 101 RFSSPQAN-SGIEAIPRVKITEYHLEKDSN-CAICKEEFEIGEEVRELPCKHFYHSDCVV 160
           R+ +P A+ S I+A+P VK+T+  L+ + N CA+C +EFE G +V+++PCKH +H DC++
Sbjct: 185 RYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLL 244

Query: 161 PWLRIHNTCPVCRYTLE------NTAAADGEGSGSGFNAGRGEE-----------FGEEE 209
           PWL +HN+CPVCR+ L          +   +GSG G  +  G++           F  ++
Sbjct: 245 PWLELHNSCPVCRFELPTDDPDYENRSQGSQGSGDGQGSVEGQQTPRFSIQLPWPFRRQD 304

[Close]

BLAST of ClCG05G009740 vs. Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-20
Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 1


Query: 105 PQANSGIEAIPRVKITEYHLEKDSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIH 164
           P + S IE++PRV+I++ H + ++NCA+C E FE G E RE+PCKH +H DC+VPWL I 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIR 249

Query: 165 NTCPVCRYTL 175
           N+CPVCR+ L
Sbjct: 250 NSCPVCRFEL 259

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BLAST of ClCG05G009740 vs. Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.1e-20
Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 1


Query: 105 PQANSGIEAIPRVKITEYHLEKDSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIH 164
           P + S IE++PRV+I++ H+  ++NCA+C E FE   E RE+PCKH +H DC+VPWL I 
Sbjct: 174 PASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIR 233

Query: 165 NTCPVCRYTL 175
           N+CPVCR+ L
Sbjct: 234 NSCPVCRFEL 243

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BLAST of ClCG05G009740 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.0e-19
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 1


Query: 101 RFSSPQAN-SGIEAIPRVKITEYHLEKDSN-CAICKEEFEIGEEVRELPCKHFYHSDCVV 160
           R+ +P A+ S IEA+P V IT+ +L  + N CA+C ++FE G E +++PCKH YH DC++
Sbjct: 193 RYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLL 252

Query: 161 PWLRIHNTCPVCRYTLENTAAADGEGSGSGFNAGRGEEFGEEEGE 204
           PWL +HN+CPVCR+ L  T   D E    G     G   G+  G+
Sbjct: 253 PWLELHNSCPVCRHELP-TDDPDYERRVRGAQGTSGGNDGDNSGQ 296

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BLAST of ClCG05G009740 vs. TrEMBL
Match: A0A0A0LC10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214060 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 2.7e-115
Identity = 201/249 (80.72%), Postives = 209/249 (83.94%), Query Frame = 1


Query: 4   PQNPRPRIVVNGGFPRTTTMHYYWCRFCRRIIRISLGNPLEISITCPFCSRNLRHELDVA 63
           PQNPR R+VVNGGF RTT MHYYWCR CRRIIRISLGNPLEISITCPFCSRNLRHELDVA
Sbjct: 6   PQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVA 65

Query: 64  RARNFPRLPNLAAGNRTISPPIVPQWGFE-TDESWITLRFSSPQANSGIEAIPRVKITEY 123
           RARNFPRLP        ISPPIV +WGFE TD SWITL+F  P  NSGIE IPRV+IT  
Sbjct: 66  RARNFPRLP-------AISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGK 125

Query: 124 HLEKDSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENTAAADG 183
           HLEKDSNCAICKEEFE+GEEVRELPCKHFYHSDCV+PWLR+HNTCPVCRYTLEN      
Sbjct: 126 HLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIG---D 185

Query: 184 EGSGSGFNAGRGEEF---GEEEGEGRGNGGWWNLVCCWWPFRFIGDWARRLRFADSGDSF 243
           EGSGSGFN GRGEEF    EEEGE RGN GWWNLVCCWWPFR +GDWARRLRFADSGDSF
Sbjct: 186 EGSGSGFNGGRGEEFREEEEEEGERRGN-GWWNLVCCWWPFRLVGDWARRLRFADSGDSF 243

Query: 244 FVVEPGSWM 249
           F VE   WM
Sbjct: 246 FAVERKRWM 243

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BLAST of ClCG05G009740 vs. TrEMBL
Match: V7BR96_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G213500g PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.2e-40
Identity = 103/280 (36.79%), Postives = 136/280 (48.57%), Query Frame = 1


Query: 2   SMPQNPRPRIVVNGGFPRTTTMHYYWCRFCRRIIRISLGNPLEISITCPFCSRNLRHELD 61
           SM    R R+VVNG   RT T HY+WC +C+R +R+   N  + SI CP+C  +LR+ELD
Sbjct: 59  SMSLTGRSRVVVNG-VRRTRTFHYFWCLYCQRTVRLPFTNS-DGSI-CPYCFHHLRYELD 118

Query: 62  VARARNFPRLPN----------LAAGNRTISPPI----------VPQWGFETDE-----S 121
           ++R R    +PN          L +    + PP+            QW  E +      +
Sbjct: 119 ISRPRLLMNVPNNLQPSPATQLLDSLALVLDPPLRRQNNNHFNTTTQWETENEHGSDHHA 178

Query: 122 WITLRFSSPQ----------------------------ANSGIEAIPRVKITEYHLEKDS 181
           WITLRF  P                             A+S I A+P VK+T+ HL  D 
Sbjct: 179 WITLRFPRPTRADRPIFSDDDFINGVIENSNRTRPPPAASSAISALPVVKLTQAHLASDP 238

Query: 182 NCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENTAAADGEGSGSG 229
           NC +CK+EFE+  E RELPCKHFYHSDC++PWLR+HNTCPVCRY L+     D   S   
Sbjct: 239 NCPVCKDEFEVEMEARELPCKHFYHSDCIIPWLRMHNTCPVCRYELQGVVTPDANYS--- 298

[Close]

BLAST of ClCG05G009740 vs. TrEMBL
Match: A0A022QH37_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a025958mg PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.3e-34
Identity = 103/283 (36.40%), Postives = 132/283 (46.64%), Query Frame = 1


Query: 3   MPQNPRPRIVVNGGFPRTTTMHYYWCRFCRRIIRISLGNPLEISITCPFCSRNLRHELDV 62
           MP    P I VNG   RT T HYYWCR C+R IR +  NP EI   CP C   + HELD+
Sbjct: 1   MPTFRHPGITVNG-VRRTRTYHYYWCRRCQRSIRTTTTNPSEI--LCPVCFGQINHELDI 60

Query: 63  ARARNF--PRLPNLAAGN------RTISPPIVPQWGFETDESWITLRFSSPQANSG---- 122
           +R R    P   + +         R + PPI       T  + + L+F  P   +G    
Sbjct: 61  SRPRPLLEPGFESSSGARLLDSLARMLDPPIPNA----THRASVLLQFIGPDGRTGPVSR 120

Query: 123 -----------------------------IEAIPRVKIT-EYHLEKDSNCAICKEEFEIG 182
                                        IEA+P V++  EY    D+ C +CK+EFE+G
Sbjct: 121 PSSDQGLDELIQELTQNDRPGPPTASPSAIEALPVVELRGEYLKNNDTCCPVCKDEFEVG 180

Query: 183 EEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTL----------ENTAAADGEGSG---- 229
             VRELPCKHFYHSDC+VPWL I+NTCPVCRY +           N  A++    G    
Sbjct: 181 VLVRELPCKHFYHSDCIVPWLHINNTCPVCRYEIRGLNNNNNNNNNNDASNNNFFGDDYN 240

[Close]

BLAST of ClCG05G009740 vs. TrEMBL
Match: M5Y2G7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024978mg PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.4e-31
Identity = 92/283 (32.51%), Postives = 121/283 (42.76%), Query Frame = 1


Query: 5   QNPRPRIVVNGGFPRTTTMHYYWCRFCRRIIRIS-------------------------- 64
           Q  RPR++VNG   R  T  Y+WC+ C+R IRI+                          
Sbjct: 4   QAHRPRVIVNG-IRRMRTFRYFWCQHCQRTIRIASSNPYAILCPFCSTEFNHELDILSPR 63

Query: 65  -LGNPLEIS-----------ITCPFCSRNLRHELDVARARN-----FPRLPNLAAGNRTI 124
            + + L +S           I  P   R      +    R+     F R P   +  R I
Sbjct: 64  LVNDHLTLSPAAQLLQTLSLILDPMHRRAREQTENEDHGRSWITLQFDRPPR--SSPRQI 123

Query: 125 SPPIVP---------------QWGFETDESWITLRFSSPQANSGIEAIPRVKITEYHLEK 184
            PP+VP                W  E D          P   S I+A+P VK+TE  +  
Sbjct: 124 VPPLVPLANNSEDVVNDVTGGTWTVEND-----CPGPPPAPASAIQALPLVKVTEGQMRN 183

Query: 185 DSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENTAAADGEGSG 230
           +  C +CKE F +G EVRE+PCKH YHSDC++PWL IHNTCPVCRY L        EG+ 
Sbjct: 184 EPTCPVCKEVFAVGGEVREMPCKHLYHSDCILPWLHIHNTCPVCRYELPE------EGTS 243

[Close]

BLAST of ClCG05G009740 vs. TrEMBL
Match: K7L7I0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G185400 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-27
Identity = 59/123 (47.97%), Postives = 76/123 (61.79%), Query Frame = 1


Query: 105 PQANSGIEAIPRVKITEYHLEKDSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIH 164
           P A+S I A+P VK+T+ HL  D NC ICK+EF +  E RELPCKHFYHSDC++PWLR+H
Sbjct: 177 PAASSAIAALPMVKLTQTHLASDPNCPICKDEFLLDMEARELPCKHFYHSDCIIPWLRMH 236

Query: 165 NTCPVCRYTLENTAAADGEGSGSGFNAGRGEEFGEEEGEGRGNGGWWNLVCCWWPFRFIG 224
           NTCPVCRY L+   +A+        NA       ++E         WN +  +WP R + 
Sbjct: 237 NTCPVCRYELQGVTSAN--------NANYYRLQNDDENAASSLVWIWNQLASFWPIRSVL 291

Query: 225 DWA 228
           DWA
Sbjct: 297 DWA 291

[Close]

BLAST of ClCG05G009740 vs. TAIR10
Match: AT1G68180.1 (AT1G68180.1 RING/U-box superfamily protein)

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-35
Identity = 91/243 (37.45%), Postives = 116/243 (47.74%), Query Frame = 1


Query: 8   RPRIVVNGGFPRTTTMHYYWCRFCRRIIRI---SLGNPLEISITCPFCSR--NLRHELDV 67
           RPR++VNG   RT T HY++CR C R IR+    L  P+     CPFCSR  NL  ELD+
Sbjct: 6   RPRVIVNGT-RRTRTFHYFYCRHCSRTIRLRSFGLYGPI-----CPFCSREINLHDELDI 65

Query: 68  ARARN----------FPRLPNLAAGNRTISPPIVPQWGFETDESWITLRFS-----SPQA 127
            R                L N    NR     +V    + TDE +  +  S      P +
Sbjct: 66  MRPSRPYWDSDTDWITLHLINEPRSNRFNHDDLV----YNTDEEFADVMPSVQIGPPPAS 125

Query: 128 NSGIEAIPRVKITEYHLEKDSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIHNTC 187
            S IEA+  V IT+  L K+  CAICKEEFE+GEE +EL C H YHS C+V WL IHNTC
Sbjct: 126 QSAIEAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTC 185

Query: 188 PVCRYTLENTAAADGEGSGSGFNAGRGEEFGEEEGEGRGNGGWWNLVCCWWPFRFIGDWA 231
           P+CR+ +    +      G  +N            +   +  +   VC  WP R + DW 
Sbjct: 186 PICRFEVNLGVSESNVDEGGSYNI-----------DNDRSNRFRTRVCSLWPLRMMIDWV 227

[Close]

BLAST of ClCG05G009740 vs. TAIR10
Match: AT2G40830.2 (AT2G40830.2 RING-H2 finger C1A)

HSP 1 Score: 108.6 bits (270), Expect = 5.7e-24
Identity = 53/136 (38.97%), Postives = 69/136 (50.74%), Query Frame = 1


Query: 91  FETDESWITLRFSSPQANSGIEAIPRVKITEYHLEK-DSNCAICKEEFEIGEEVRELPCK 150
           FE   +  T R   P   S I+A+P +KI + HL   DSNC +CK+EFE+G E +++PC 
Sbjct: 150 FEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCN 209

Query: 151 HFYHSDCVVPWLRIHNTCPVCRYTLENTAAADGEGSGSGFNAGRGEEFGEEEGEGRGNGG 210
           H YHSDC+VPWL  HN+CPVCR  L + +      + +                 R NG 
Sbjct: 210 HIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN 269

Query: 211 -WWNLVCCWWPFRFIG 225
              N    +WPFR  G
Sbjct: 270 ERRNPFSSFWPFRSSG 285

[Close]

BLAST of ClCG05G009740 vs. TAIR10
Match: AT3G56580.2 (AT3G56580.2 RING/U-box superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-22
Identity = 50/118 (42.37%), Postives = 66/118 (55.93%), Query Frame = 1


Query: 105 PQANSGIEAIPRVKITEYHLEK-DSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRI 164
           P   S I+A+P +KIT+ HL+  DS+C +CK+EFE+  E +++PC H YHSDC+VPWL  
Sbjct: 160 PAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQ 219

Query: 165 HNTCPVCRYTLENTAAADGEGSGSGFNAGRGEEFGEEEGEGRGNGGWWNLVCCWWPFR 222
           HN+CPVCR  L +       GS S   + +          GR N    N+    WPFR
Sbjct: 220 HNSCPVCRKELPS------RGSSSSTQSSQ-----NRSTNGRENSRRRNIFSNLWPFR 266

[Close]

BLAST of ClCG05G009740 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 4.1e-22
Identity = 48/127 (37.80%), Postives = 75/127 (59.06%), Query Frame = 1


Query: 101 RFSSPQAN-SGIEAIPRVKITEYHLEKDSN-CAICKEEFEIGEEVRELPCKHFYHSDCVV 160
           R+ +P A+ S I+A+P VK+T+  L+ + N CA+C +EFE G +V+++PCKH +H DC++
Sbjct: 185 RYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLL 244

Query: 161 PWLRIHNTCPVCRYTLE------NTAAADGEGSGSGFNAGRGEE-----------FGEEE 209
           PWL +HN+CPVCR+ L          +   +GSG G  +  G++           F  ++
Sbjct: 245 PWLELHNSCPVCRFELPTDDPDYENRSQGSQGSGDGQGSVEGQQTPRFSIQLPWPFRRQD 304

[Close]

BLAST of ClCG05G009740 vs. TAIR10
Match: AT3G46620.1 (AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-21
Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 1


Query: 105 PQANSGIEAIPRVKITEYHLEKDSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIH 164
           P + S IE++PRV+I++ H + ++NCA+C E FE G E RE+PCKH +H DC+VPWL I 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIR 249

Query: 165 NTCPVCRYTL 175
           N+CPVCR+ L
Sbjct: 250 NSCPVCRFEL 259

[Close]

BLAST of ClCG05G009740 vs. NCBI nr
Match: gi|659112139|ref|XP_008456082.1| (PREDICTED: uncharacterized protein LOC103496124 isoform X1 [Cucumis melo])

HSP 1 Score: 449.9 bits (1156), Expect = 3.0e-123
Identity = 215/259 (83.01%), Postives = 220/259 (84.94%), Query Frame = 1


Query: 4   PQNPRPRIVVNGGFPRTTTMHYYWCRFCRRIIRISLGNPLEISITCPFCSRNLRHELDVA 63
           PQNPR RIVVNGGF RTT MHYYWCR CRRIIRISLGNPLEISITCPFCSRNLRHELDVA
Sbjct: 6   PQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVA 65

Query: 64  RARNFPRLPNLAAGNRTISPPIVPQWGFE-TDESWITLRFSSPQANSGIEAIPRVKITEY 123
           RARNFPRLP        ISPPIV +WGFE TDESWITL+F  P  NSGIE IPRV+IT  
Sbjct: 66  RARNFPRLP-------PISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGK 125

Query: 124 HLEKDSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENTAAADG 183
           HLEKDSNCAICKEEFE+GEEVRELPCKHFYHSDCVVPWLR+HNTCPVCRYTLEN      
Sbjct: 126 HLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIG---D 185

Query: 184 EGSGSGFNAGRGEEFGEE-------EGEGRGNGGWWNLVCCWWPFRFIGDWARRLRFADS 243
           EGSGSGFN GRGEE GEE       EGEGRGN GWWNLVCCWWP R IGDWARRLRFADS
Sbjct: 186 EGSGSGFNGGRGEELGEEEEEEEEGEGEGRGN-GWWNLVCCWWPLRLIGDWARRLRFADS 245

Query: 244 GDSFFVVEPGSWMYSWLAN 255
           GDSFFVVEPGSWMYSWLAN
Sbjct: 246 GDSFFVVEPGSWMYSWLAN 253

[Close]

BLAST of ClCG05G009740 vs. NCBI nr
Match: gi|449464484|ref|XP_004149959.1| (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus])

HSP 1 Score: 445.3 bits (1144), Expect = 7.3e-122
Identity = 210/255 (82.35%), Postives = 218/255 (85.49%), Query Frame = 1


Query: 4   PQNPRPRIVVNGGFPRTTTMHYYWCRFCRRIIRISLGNPLEISITCPFCSRNLRHELDVA 63
           PQNPR R+VVNGGF RTT MHYYWCR CRRIIRISLGNPLEISITCPFCSRNLRHELDVA
Sbjct: 6   PQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVA 65

Query: 64  RARNFPRLPNLAAGNRTISPPIVPQWGFE-TDESWITLRFSSPQANSGIEAIPRVKITEY 123
           RARNFPRLP        ISPPIV +WGFE TD SWITL+F  P  NSGIE IPRV+IT  
Sbjct: 66  RARNFPRLP-------AISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGK 125

Query: 124 HLEKDSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENTAAADG 183
           HLEKDSNCAICKEEFE+GEEVRELPCKHFYHSDCV+PWLR+HNTCPVCRYTLEN      
Sbjct: 126 HLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIG---D 185

Query: 184 EGSGSGFNAGRGEEF---GEEEGEGRGNGGWWNLVCCWWPFRFIGDWARRLRFADSGDSF 243
           EGSGSGFN GRGEEF    EEEGE RGN GWWNLVCCWWPFR +GDWARRLRFADSGDSF
Sbjct: 186 EGSGSGFNGGRGEEFREEEEEEGERRGN-GWWNLVCCWWPFRLVGDWARRLRFADSGDSF 245

Query: 244 FVVEPGSWMYSWLAN 255
           F VEPGSWMYSWLAN
Sbjct: 246 FAVEPGSWMYSWLAN 249

[Close]

BLAST of ClCG05G009740 vs. NCBI nr
Match: gi|659112141|ref|XP_008456083.1| (PREDICTED: uncharacterized protein LOC103496124 isoform X2 [Cucumis melo])

HSP 1 Score: 439.5 bits (1129), Expect = 4.0e-120
Identity = 213/259 (82.24%), Postives = 218/259 (84.17%), Query Frame = 1


Query: 4   PQNPRPRIVVNGGFPRTTTMHYYWCRFCRRIIRISLGNPLEISITCPFCSRNLRHELDVA 63
           PQNPR RIVVNGGF RTT MHYYWCR CRRIIRISLGNPLEISITCPFCSRNLRHELDVA
Sbjct: 6   PQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVA 65

Query: 64  RARNFPRLPNLAAGNRTISPPIVPQWGFE-TDESWITLRFSSPQANSGIEAIPRVKITEY 123
           RARNFPRLP        ISPPIV +WGFE TDESWITL+F  P  NSGIE IPRV+IT  
Sbjct: 66  RARNFPRLP-------PISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGK 125

Query: 124 HLEKDSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENTAAADG 183
           HLEKDSNCAICKEEFE+GEEVRELPCKHFYHSDCVVPWLR+HNTCPVCRYTLEN      
Sbjct: 126 HLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIG---D 185

Query: 184 EGSGSGFNAGRGEEFGEE-------EGEGRGNGGWWNLVCCWWPFRFIGDWARRLRFADS 243
           EGSGSGFN GRGEE GEE       EGEGRGN GWWNLVCCWWP R IGDWARRLRFADS
Sbjct: 186 EGSGSGFNGGRGEELGEEEEEEEEGEGEGRGN-GWWNLVCCWWPLRLIGDWARRLRFADS 245

Query: 244 GDSFFVVEPGSWMYSWLAN 255
           GDSFFVVE  SWMYSWLAN
Sbjct: 246 GDSFFVVE-RSWMYSWLAN 252

[Close]

BLAST of ClCG05G009740 vs. NCBI nr
Match: gi|778680175|ref|XP_011651263.1| (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus])

HSP 1 Score: 434.9 bits (1117), Expect = 9.8e-119
Identity = 208/255 (81.57%), Postives = 216/255 (84.71%), Query Frame = 1


Query: 4   PQNPRPRIVVNGGFPRTTTMHYYWCRFCRRIIRISLGNPLEISITCPFCSRNLRHELDVA 63
           PQNPR R+VVNGGF RTT MHYYWCR CRRIIRISLGNPLEISITCPFCSRNLRHELDVA
Sbjct: 6   PQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVA 65

Query: 64  RARNFPRLPNLAAGNRTISPPIVPQWGFE-TDESWITLRFSSPQANSGIEAIPRVKITEY 123
           RARNFPRLP        ISPPIV +WGFE TD SWITL+F  P  NSGIE IPRV+IT  
Sbjct: 66  RARNFPRLP-------AISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGK 125

Query: 124 HLEKDSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENTAAADG 183
           HLEKDSNCAICKEEFE+GEEVRELPCKHFYHSDCV+PWLR+HNTCPVCRYTLEN      
Sbjct: 126 HLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIG---D 185

Query: 184 EGSGSGFNAGRGEEF---GEEEGEGRGNGGWWNLVCCWWPFRFIGDWARRLRFADSGDSF 243
           EGSGSGFN GRGEEF    EEEGE RGN GWWNLVCCWWPFR +GDWARRLRFADSGDSF
Sbjct: 186 EGSGSGFNGGRGEEFREEEEEEGERRGN-GWWNLVCCWWPFRLVGDWARRLRFADSGDSF 245

Query: 244 FVVEPGSWMYSWLAN 255
           F VE  SWMYSWLAN
Sbjct: 246 FAVE-RSWMYSWLAN 248

[Close]

BLAST of ClCG05G009740 vs. NCBI nr
Match: gi|778680186|ref|XP_011651266.1| (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X3 [Cucumis sativus])

HSP 1 Score: 423.7 bits (1088), Expect = 2.3e-115
Identity = 201/246 (81.71%), Postives = 209/246 (84.96%), Query Frame = 1


Query: 4   PQNPRPRIVVNGGFPRTTTMHYYWCRFCRRIIRISLGNPLEISITCPFCSRNLRHELDVA 63
           PQNPR R+VVNGGF RTT MHYYWCR CRRIIRISLGNPLEISITCPFCSRNLRHELDVA
Sbjct: 6   PQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVA 65

Query: 64  RARNFPRLPNLAAGNRTISPPIVPQWGFE-TDESWITLRFSSPQANSGIEAIPRVKITEY 123
           RARNFPRLP        ISPPIV +WGFE TD SWITL+F  P  NSGIE IPRV+IT  
Sbjct: 66  RARNFPRLP-------AISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGK 125

Query: 124 HLEKDSNCAICKEEFEIGEEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENTAAADG 183
           HLEKDSNCAICKEEFE+GEEVRELPCKHFYHSDCV+PWLR+HNTCPVCRYTLEN      
Sbjct: 126 HLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIG---D 185

Query: 184 EGSGSGFNAGRGEEF---GEEEGEGRGNGGWWNLVCCWWPFRFIGDWARRLRFADSGDSF 243
           EGSGSGFN GRGEEF    EEEGE RGN GWWNLVCCWWPFR +GDWARRLRFADSGDSF
Sbjct: 186 EGSGSGFNGGRGEEFREEEEEEGERRGN-GWWNLVCCWWPFRLVGDWARRLRFADSGDSF 240

Query: 244 FVVEPG 246
           F VEPG
Sbjct: 246 FAVEPG 240

The following BLAST results are available for this feature:

BLAST of ClCG05G009740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RHC1A_ARATH	1.0e-22	38.97	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2...	[more]
RNG1L_ARATH	7.2e-21	37.80	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1...	[more]
RDUF1_ARATH	2.7e-20	55.71	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1	[more]
RDUF2_ARATH	6.1e-20	54.29	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1	[more]
RING1_GOSHI	3.0e-19	43.81	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1	[more]

BLAST of ClCG05G009740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC10_CUCSA	2.7e-115	80.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214060 PE=4 SV=1	[more]
V7BR96_PHAVU	2.2e-40	36.79	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G213500g PE=4 SV=1	[more]
A0A022QH37_ERYGU	2.3e-34	36.40	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a025958mg PE=4 SV=1	[more]
M5Y2G7_PRUPE	5.4e-31	32.51	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024978mg PE=4 S...	[more]
K7L7I0_SOYBN	1.6e-27	47.97	Uncharacterized protein OS=Glycine max GN=GLYMA_08G185400 PE=4 SV=1	[more]

BLAST of ClCG05G009740 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68180.1	2.5e-35	37.45	RING/U-box superfamily protein	[more]
AT2G40830.2	5.7e-24	38.97	RING-H2 finger C1A	[more]
AT3G56580.2	2.4e-22	42.37	RING/U-box superfamily protein	[more]
AT3G19950.1	4.1e-22	37.80	RING/U-box superfamily protein	[more]
AT3G46620.1	1.5e-21	55.71	zinc finger (C3HC4-type RING finger) family protein	[more]

BLAST of ClCG05G009740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112139\|ref\|XP_008456082.1\|	3.0e-123	83.01	PREDICTED: uncharacterized protein LOC103496124 isoform X1 [Cucumis melo]	[more]
gi\|449464484\|ref\|XP_004149959.1\|	7.3e-122	82.35	PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus]	[more]
gi\|659112141\|ref\|XP_008456083.1\|	4.0e-120	82.24	PREDICTED: uncharacterized protein LOC103496124 isoform X2 [Cucumis melo]	[more]
gi\|778680175\|ref\|XP_011651263.1\|	9.8e-119	81.57	PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus]	[more]
gi\|778680186\|ref\|XP_011651266.1\|	2.3e-115	81.71	PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016874	ligase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G009740.1	ClCG05G009740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 129..171 score: 1.1
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 130..170 score: 4.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 130..171 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 125..174 score: 5.2
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 24..196 score: 1.6
None	No IPR available	PANTHER	PTHR22763:SF88	RING/U-BOX DOMAIN-CONTAINING PROTEIN	coord: 24..196 score: 1.6
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 111..175 score: 8.48

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G009740	Csa3G214060	Cucumber (Chinese Long) v2	cuwcgB224
ClCG05G009740	MELO3C019481	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G009740	Cla013043	Watermelon (97103) v1	wcgwmB286
ClCG05G009740	Cla97C05G092100	Watermelon (97103) v2	wcgwmbB229
ClCG05G009740	Bhi01G001227	Wax gourd	wcgwgoB427
ClCG05G009740	CSPI03G18810	Wild cucumber (PI 183967)	cpiwcgB228
ClCG05G009740	Cucsa.049550	Cucumber (Gy14) v1	cgywcgB032
ClCG05G009740	CmaCh04G005160	Cucurbita maxima (Rimu)	cmawcgB659
ClCG05G009740	CmoCh04G005550	Cucurbita moschata (Rifu)	cmowcgB660
ClCG05G009740	Lsi05G001870	Bottle gourd (USVL1VR-Ls)	lsiwcgB332
ClCG05G009740	Cp4.1LG01g02150	Cucurbita pepo (Zucchini)	cpewcgB394
ClCG05G009740	CsGy3G018660	Cucumber (Gy14) v2	cgybwcgB206
ClCG05G009740	MELO3C019481.2	Melon (DHL92) v3.6.1	medwcgB417
ClCG05G009740	Carg26428	Silver-seed gourd	carwcgB0064
ClCG05G009740	CsaV3_3G018890	Cucumber (Chinese Long) v3	cucwcgB228

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G009740	Silver-seed gourd	carwcgB0636
ClCG05G009740	Cucumber (Chinese Long) v3	cucwcgB238
ClCG05G009740	Cucumber (Gy14) v1	cgywcgB003
ClCG05G009740	Cucurbita maxima (Rimu)	cmawcgB297
ClCG05G009740	Cucurbita moschata (Rifu)	cmowcgB291
ClCG05G009740	Wild cucumber (PI 183967)	cpiwcgB237
ClCG05G009740	Cucumber (Chinese Long) v2	cuwcgB230
ClCG05G009740	Cucurbita pepo (Zucchini)	cpewcgB208
ClCG05G009740	Cucumber (Gy14) v2	cgybwcgB214