MELO3C019481 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C019481
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRING finger protein 126
Locationchr6 : 10391812 .. 10393716 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCATTAAACCTTCAATTCTTAGAGTATGTCCATCCCCCAGCCTCAAAACCCCCGATCTCGAATCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCTAGGGCTCGAAATTTCCCTCGTCTCCCCCCGATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGATACCGATGAGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATAGAGGAGATTCCAAGGGTGAGAATTACGGGAAAGCATTTGGAGAAGGATTCGAACTGTGCGATTTGTAAGGAGGAATTTGAAATGGGAGAGGAAGTTAGGGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGCGTTGTTCCTTGGTTGAGAATGCATAATACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAACTCGGGGAAGAAGAAGAAGAAGAAGAAGAAGGCGAAGGCGAAGGAAGAGGGAATGGATGGTGGAACTTGGTGTGTTGTTGGTGGCCGCTCCGTTTAATAGGCGATTGGGCTCGCCGTCTCCGGTTTGCTGATTCGGGTGATAGTTTCTTCGTCGTTGAACGTAAGGTTTTTTCTTTTCAAGTTTCTTCATCTTCATCTATGGATGGAGTTGGGAATCAAAATAAAAATAACAAACCATTTCTTATAATCAAAATGAAATTGTTTAGATTATTACCATTTTTCTTTTACCAAATATTTATTTCATTTTTTCAAATTTTAAAAATTTGCCTAAATTTAAATTTAGAAAATTATAAAAAAAAATAGAACCTTTAAAATGGAAAACACAGATAAAACATTTCATGTCGTAAACATCTTATAAAATATGAGAAATCAAGTAAAACAAATTGTTTGTCAAATTTTTCTATCTTTTAGAAAATATCTTTAAATTTTATATTTAATTTTGTAATTTTAGATCAGATACGTATATTTAAAAGAAAATTGGGGTTATATTCAAATGGAAACGATTTACAAAATATCCTAAAATTTATTAAATTCTTTTATAACCCAATCTCTTATTTAAGTTTTTTATTTTTGGTAAGAATTTCTGAAAAACAATACAAACTATGAAACTGCACAGTTTATAAATTGGACTCCTTATTTGGTAAAAGATTAAATGTTAACTTTACAATTTTCTACTTTATTTATTCACTATACATTCGAATGTCTAATTTCAATTTATATACTTTGGTAGTTGATCTTAGCTATTATTAACTATTAGCATTGTTACCATAAATTTTAATAACATAATATTTACGGACATGATAAATATTTTTATTATTATTAACAAACCAAATATAATAAAAACTAATTTTGATAACTAAATTAAAAAATTATTAAATACACTCAAACAGATAGTAAACATTATTTTCTTAAAGAACAAAAAGACAAAAAATGACAGAATTCCATGAAGATCCTAACATAAGACAACCAGATTAAACATGACAAAATGGACCATCAAAATCAAACAAGTCAACTTAAAAAAGGACAAAAATTGACCATTAAAATCAAACTAGTCTAATCTCAATCAAATTCACAAAAACATAAGTAAAATCCAACTCAAAACAGTCAAACAGACAAAAATTTCAAAATTATACACTTAAAAAAGAAAGAAAAAAAAAAGAAAGAGTTTACAAAATCCAAATATTTAAATATAATTTTAATGTGTACTGGTTGGAGATTGCAGCAGGTTCGTGGATGTACTCTTGGCTAG

mRNA sequence

ATGTCCATTAAACCTTCAATTCTTAGAGTATGTCCATCCCCCAGCCTCAAAACCCCCGATCTCGAATCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCTAGGGCTCGAAATTTCCCTCGTCTCCCCCCGATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGATACCGATGAGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATAGAGGAGATTCCAAGGGTGAGAATTACGGGAAAGCATTTGGAGAAGGATTCGAACTGTGCGATTTGTAAGGAGGAATTTGAAATGGGAGAGGAAGTTAGGGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGCGTTGTTCCTTGGTTGAGAATGCATAATACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAACTCGGGGAAGAAGAAGAAGAAGAAGAAGAAGGCGAAGGCGAAGGAAGAGGGAATGGATGGTGGAACTTGCAGGTTCGTGGATGTACTCTTGGCTAG

Coding sequence (CDS)

ATGTCCATCCCCCAGCCTCAAAACCCCCGATCTCGAATCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCTAGGGCTCGAAATTTCCCTCGTCTCCCCCCGATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGATACCGATGAGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATAGAGGAGATTCCAAGGGTGAGAATTACGGGAAAGCATTTGGAGAAGGATTCGAACTGTGCGATTTGTAAGGAGGAATTTGAAATGGGAGAGGAAGTTAGGGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGCGTTGTTCCTTGGTTGAGAATGCATAATACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAACTCGGGGAAGAAGAAGAAGAAGAAGAAGAAGGCGAAGGCGAAGGAAGAGGGAATGGATGGTGGAACTTGCAGGTTCGTGGATGTACTCTTGGCTAG

Protein sequence

MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGSGFNGGRGEELGEEEEEEEEGEGEGRGNGWWNLQVRGCTLG*
Homology
[Close]
BLAST of MELO3C019481 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.7e-21
Identity = 47/115 (40.87%), Postives = 61/115 (53.04%), Query Frame = 1 

Query: 95  TLQFPRPAVNSGIEEIPRVRITGKHLEK-DSNCAICKEEFEMGEEVRELPCKHFYHSDCV 154
           T + P PA  S I+ +P ++I  +HL   DSNC +CK+EFE+G E +++PC H YHSDC+
Sbjct: 158 TRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCI 217

Query: 155 VPWLRMHNTCPVCRYTLENIGDEGSGSGFNGGRGEELGEEEEEEEEGEGEGRGNG 209
           VPWL  HN+CPVCR  L +     SG   +  R                  R NG
Sbjct: 218 VPWLVQHNSCPVCRQELPS----ASGPSSSQNRTTPTRNYRSSSSSSSSNSRENG 268

[Close]
BLAST of MELO3C019481 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.2e-21
Identity = 50/135 (37.04%), Postives = 74/135 (54.81%), Query Frame = 1 

Query: 101 PAVNSGIEEIPRVRITGKHLEKDSN-CAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRM 160
           PA  S I+ +P V++T   L+ + N CA+C +EFE G +V+++PCKH +H DC++PWL +
Sbjct: 190 PASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLEL 249

Query: 161 HNTCPVCRYTL---------ENIGDEGSGSGFNGGRGEELGEEEEE------EEEGEGEG 217
           HN+CPVCR+ L          + G +GSG G     G++      +       ++G G G
Sbjct: 250 HNSCPVCRFELPTDDPDYENRSQGSQGSGDGQGSVEGQQTPRFSIQLPWPFRRQDGSGSG 309

[Close]
BLAST of MELO3C019481 vs. Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-19
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 1 

Query: 101 PAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMH 160
           PA  S IE +PRV I+  H + ++NCA+C E FE G E RE+PCKH +H DC+VPWL + 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIR 249

Query: 161 NTCPVCRYTL 171
           N+CPVCR+ L
Sbjct: 250 NSCPVCRFEL 259

[Close]
BLAST of MELO3C019481 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.5e-19
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 1 

Query: 101 PAVNSGIEEIPRVRITGKHLEKDSN-CAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRM 160
           PA  S IE +P V IT  +L  + N CA+C ++FE G E +++PCKH YH DC++PWL +
Sbjct: 198 PASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLEL 257

Query: 161 HNTCPVCRYTL--ENIGDEGSGSGFNGGRGEELGEEEEEEEEGEGEGRGNGW-----WNL 217
           HN+CPVCR+ L  ++   E    G  G  G   G+   +  +G+       +     W  
Sbjct: 258 HNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDNRTVERSFRISLPWPF 317

[Close]
BLAST of MELO3C019481 vs. Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.5e-19
Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 1 

Query: 101 PAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMH 160
           PA  S IE +PRV I+  H+  ++NCA+C E FE   E RE+PCKH +H DC+VPWL + 
Sbjct: 174 PASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIR 233

Query: 161 NTCPVCRYTL 171
           N+CPVCR+ L
Sbjct: 234 NSCPVCRFEL 243

[Close]
BLAST of MELO3C019481 vs. TrEMBL
Match: A0A0A0LC10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214060 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 3.0e-118
Identity = 200/212 (94.34%), Postives = 203/212 (95.75%), Query Frame = 1 

Query: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSR+VVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLP ISPPIVQRWGFE+TD SWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGEELGEEEEEEEEGEGEGRGNGWWNL 213
           GFNGGRGEE  EEEEE    EGE RGNGWWNL
Sbjct: 181 GFNGGRGEEFREEEEE----EGERRGNGWWNL 208

[Close]
BLAST of MELO3C019481 vs. TrEMBL
Match: V7BR96_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G213500g PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.8e-36
Identity = 88/223 (39.46%), Postives = 116/223 (52.02%), Query Frame = 1 

Query: 10  RSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARARN 69
           RSR+VVNG   RT   HY+WC  C+R +R+   N  + SI CP+C  +LR+ELD++R R 
Sbjct: 65  RSRVVVNG-VRRTRTFHYFWCLYCQRTVRLPFTNS-DGSI-CPYCFHHLRYELDISRPRL 124

Query: 70  FPRLPP-----------------ISPPI----------VQRWGFEDTDES----WITLQF 129
              +P                  + PP+            +W  E+   S    WITL+F
Sbjct: 125 LMNVPNNLQPSPATQLLDSLALVLDPPLRRQNNNHFNTTTQWETENEHGSDHHAWITLRF 184

Query: 130 PRP----------------------------AVNSGIEEIPRVRITGKHLEKDSNCAICK 174
           PRP                            A +S I  +P V++T  HL  D NC +CK
Sbjct: 185 PRPTRADRPIFSDDDFINGVIENSNRTRPPPAASSAISALPVVKLTQAHLASDPNCPVCK 244

[Close]
BLAST of MELO3C019481 vs. TrEMBL
Match: A0A022QH37_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a025958mg PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.5e-32
Identity = 94/254 (37.01%), Postives = 118/254 (46.46%), Query Frame = 1 

Query: 13  IVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARARNFPR 72
           I VNG   RT   HYYWCR C+R IR +  NP EI   CP C   + HELD++R R  P 
Sbjct: 9   ITVNG-VRRTRTYHYYWCRRCQRSIRTTTTNPSEI--LCPVCFGQINHELDISRPR--PL 68

Query: 73  LPP-----------------ISPPIVQRWGFEDTDESWITLQF----------------- 132
           L P                 + PPI        T  + + LQF                 
Sbjct: 69  LEPGFESSSGARLLDSLARMLDPPIPNA-----THRASVLLQFIGPDGRTGPVSRPSSDQ 128

Query: 133 ----------------PRPAVNSGIEEIPRVRITGKHLE-KDSNCAICKEEFEMGEEVRE 192
                           P  A  S IE +P V + G++L+  D+ C +CK+EFE+G  VRE
Sbjct: 129 GLDELIQELTQNDRPGPPTASPSAIEALPVVELRGEYLKNNDTCCPVCKDEFEVGVLVRE 188

Query: 193 LPCKHFYHSDCVVPWLRMHNTCPVCRYTLENI------------------GDEGSGSGFN 198
           LPCKHFYHSDC+VPWL ++NTCPVCRY +  +                  GD+ +  GF 
Sbjct: 189 LPCKHFYHSDCIVPWLHINNTCPVCRYEIRGLNNNNNNNNNNDASNNNFFGDDYNFEGFM 248

[Close]
BLAST of MELO3C019481 vs. TrEMBL
Match: M5Y2G7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024978mg PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.4e-32
Identity = 89/263 (33.84%), Postives = 116/263 (44.11%), Query Frame = 1 

Query: 7   QNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 66
           Q  R R++VNG   R     Y+WC+ C+R IRI+  NP   +I CPFCS    HELD+  
Sbjct: 4   QAHRPRVIVNG-IRRMRTFRYFWCQHCQRTIRIASSNPY--AILCPFCSTEFNHELDILS 63

Query: 67  ARNFPRLPPISPP--IVQRWGF---------------EDTDESWITLQF----------- 126
            R       +SP   ++Q                   ED   SWITLQF           
Sbjct: 64  PRLVNDHLTLSPAAQLLQTLSLILDPMHRRAREQTENEDHGRSWITLQFDRPPRSSPRQI 123

Query: 127 -------------------------------PRPAVNSGIEEIPRVRITGKHLEKDSNCA 186
                                          P PA  S I+ +P V++T   +  +  C 
Sbjct: 124 VPPLVPLANNSEDVVNDVTGGTWTVENDCPGPPPAPASAIQALPLVKVTEGQMRNEPTCP 183

Query: 187 ICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGSGFNGGRG 211
           +CKE F +G EVRE+PCKH YHSDC++PWL +HNTCPVCRY L    +EG+    N    
Sbjct: 184 VCKEVFAVGGEVREMPCKHLYHSDCILPWLHIHNTCPVCRYELP---EEGTSCDNNNNEF 243

[Close]
BLAST of MELO3C019481 vs. TrEMBL
Match: C5XSW2_SORBI (Putative uncharacterized protein Sb04g034270 OS=Sorghum bicolor GN=Sb04g034270 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-27
Identity = 57/103 (55.34%), Postives = 67/103 (65.05%), Query Frame = 1 

Query: 99  PRPAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLR 158
           P PA +S I+ +P VRITG HL   S C +CKE+FE+GE  R+LPCKH YHSDC+VPWLR
Sbjct: 163 PAPAPSSAIDSLPTVRITGAHLSDGSQCPVCKEDFELGEAARQLPCKHVYHSDCIVPWLR 222

Query: 159 MHNTCPVCRYTLENIGDEGSGSGFNGGRGEELGEEEEEEEEGE 202
           +HN+CPVCRY L   G  G GS     RG   G     E E E
Sbjct: 223 LHNSCPVCRYQLPGAGSNGGGSLQAAPRGGSNGNNRNRERERE 265

[Close]
BLAST of MELO3C019481 vs. TAIR10
Match: AT1G68180.1 (AT1G68180.1 RING/U-box superfamily protein)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31
Identity = 84/205 (40.98%), Postives = 108/205 (52.68%), Query Frame = 1 

Query: 10  RSRIVVNGGFTRTTNMHYYWCRICRRIIRI---SLGNPLEISITCPFCSR--NLRHELDV 69
           R R++VNG   RT   HY++CR C R IR+    L  P+     CPFCSR  NL  ELD+
Sbjct: 6   RPRVIVNGT-RRTRTFHYFYCRHCSRTIRLRSFGLYGPI-----CPFCSREINLHDELDI 65

Query: 70  ARAR--------NFPRLPPISPPIVQRWGFED----TDESWITLQ-----FPRPAVNSGI 129
            R          ++  L  I+ P   R+  +D    TDE +  +       P PA  S I
Sbjct: 66  MRPSRPYWDSDTDWITLHLINEPRSNRFNHDDLVYNTDEEFADVMPSVQIGPPPASQSAI 125

Query: 130 EEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCR 187
           E +  V IT + L K+  CAICKEEFE+GEE +EL C H YHS C+V WL +HNTCP+CR
Sbjct: 126 EAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICR 185

[Close]
BLAST of MELO3C019481 vs. TAIR10
Match: AT2G40830.2 (AT2G40830.2 RING-H2 finger C1A)

HSP 1 Score: 103.2 bits (256), Expect = 2.1e-22
Identity = 47/115 (40.87%), Postives = 61/115 (53.04%), Query Frame = 1 

Query: 95  TLQFPRPAVNSGIEEIPRVRITGKHLEK-DSNCAICKEEFEMGEEVRELPCKHFYHSDCV 154
           T + P PA  S I+ +P ++I  +HL   DSNC +CK+EFE+G E +++PC H YHSDC+
Sbjct: 158 TRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCI 217

Query: 155 VPWLRMHNTCPVCRYTLENIGDEGSGSGFNGGRGEELGEEEEEEEEGEGEGRGNG 209
           VPWL  HN+CPVCR  L +     SG   +  R                  R NG
Sbjct: 218 VPWLVQHNSCPVCRQELPS----ASGPSSSQNRTTPTRNYRSSSSSSSSNSRENG 268

[Close]
BLAST of MELO3C019481 vs. TAIR10
Match: AT3G56580.2 (AT3G56580.2 RING/U-box superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-22
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 1 

Query: 99  PRPAVNSGIEEIPRVRITGKHLEK-DSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWL 158
           P PA  S I+ +P ++IT KHL+  DS+C +CK+EFE+  E +++PC H YHSDC+VPWL
Sbjct: 158 PPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWL 217

Query: 159 RMHNTCPVCRYTLENIGDEGS 179
             HN+CPVCR  L + G   S
Sbjct: 218 VQHNSCPVCRKELPSRGSSSS 238

[Close]
BLAST of MELO3C019481 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 4.6e-22
Identity = 50/135 (37.04%), Postives = 74/135 (54.81%), Query Frame = 1 

Query: 101 PAVNSGIEEIPRVRITGKHLEKDSN-CAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRM 160
           PA  S I+ +P V++T   L+ + N CA+C +EFE G +V+++PCKH +H DC++PWL +
Sbjct: 190 PASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLEL 249

Query: 161 HNTCPVCRYTL---------ENIGDEGSGSGFNGGRGEELGEEEEE------EEEGEGEG 217
           HN+CPVCR+ L          + G +GSG G     G++      +       ++G G G
Sbjct: 250 HNSCPVCRFELPTDDPDYENRSQGSQGSGDGQGSVEGQQTPRFSIQLPWPFRRQDGSGSG 309

[Close]
BLAST of MELO3C019481 vs. TAIR10
Match: AT3G46620.1 (AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 97.8 bits (242), Expect = 8.7e-21
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 1 

Query: 101 PAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMH 160
           PA  S IE +PRV I+  H + ++NCA+C E FE G E RE+PCKH +H DC+VPWL + 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIR 249

Query: 161 NTCPVCRYTL 171
           N+CPVCR+ L
Sbjct: 250 NSCPVCRFEL 259

[Close]
BLAST of MELO3C019481 vs. NCBI nr
Match: gi|659112141|ref|XP_008456083.1| (PREDICTED: uncharacterized protein LOC103496124 isoform X2 [Cucumis melo])

HSP 1 Score: 461.8 bits (1187), Expect = 6.5e-127
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1 

Query: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGEELGEEEEEEEEGEGEGRGNGWWNL 213
           GFNGGRGEELGEEEEEEEEGEGEGRGNGWWNL
Sbjct: 181 GFNGGRGEELGEEEEEEEEGEGEGRGNGWWNL 212

[Close]
BLAST of MELO3C019481 vs. NCBI nr
Match: gi|659112139|ref|XP_008456082.1| (PREDICTED: uncharacterized protein LOC103496124 isoform X1 [Cucumis melo])

HSP 1 Score: 461.8 bits (1187), Expect = 6.5e-127
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1 

Query: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGEELGEEEEEEEEGEGEGRGNGWWNL 213
           GFNGGRGEELGEEEEEEEEGEGEGRGNGWWNL
Sbjct: 181 GFNGGRGEELGEEEEEEEEGEGEGRGNGWWNL 212

[Close]
BLAST of MELO3C019481 vs. NCBI nr
Match: gi|449464484|ref|XP_004149959.1| (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 4.2e-118
Identity = 200/212 (94.34%), Postives = 203/212 (95.75%), Query Frame = 1 

Query: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSR+VVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLP ISPPIVQRWGFE+TD SWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGEELGEEEEEEEEGEGEGRGNGWWNL 213
           GFNGGRGEE  EEEEE    EGE RGNGWWNL
Sbjct: 181 GFNGGRGEEFREEEEE----EGERRGNGWWNL 208

[Close]
BLAST of MELO3C019481 vs. NCBI nr
Match: gi|778680186|ref|XP_011651266.1| (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X3 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 4.2e-118
Identity = 200/212 (94.34%), Postives = 203/212 (95.75%), Query Frame = 1 

Query: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSR+VVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLP ISPPIVQRWGFE+TD SWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGEELGEEEEEEEEGEGEGRGNGWWNL 213
           GFNGGRGEE  EEEEE    EGE RGNGWWNL
Sbjct: 181 GFNGGRGEEFREEEEE----EGERRGNGWWNL 208

[Close]
BLAST of MELO3C019481 vs. NCBI nr
Match: gi|700202433|gb|KGN57566.1| (hypothetical protein Csa_3G214060 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 4.2e-118
Identity = 200/212 (94.34%), Postives = 203/212 (95.75%), Query Frame = 1 

Query: 1   MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60
           MSIPQPQNPRSR+VVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH
Sbjct: 1   MSIPQPQNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRH 60

Query: 61  ELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHL 120
           ELDVARARNFPRLP ISPPIVQRWGFE+TD SWITLQFPRPAVNSGIEEIPRVRITGKHL
Sbjct: 61  ELDVARARNFPRLPAISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKHL 120

Query: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGS 180
           EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCV+PWLRMHNTCPVCRYTLENIGDEGSGS
Sbjct: 121 EKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENIGDEGSGS 180

Query: 181 GFNGGRGEELGEEEEEEEEGEGEGRGNGWWNL 213
           GFNGGRGEE  EEEEE    EGE RGNGWWNL
Sbjct: 181 GFNGGRGEEFREEEEE----EGERRGNGWWNL 208

The following BLAST results are available for this feature:
BLAST of MELO3C019481 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RHC1A_ARATH3.7e-2140.87Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2... [more]
RNG1L_ARATH8.2e-2137.04E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
RDUF1_ARATH1.6e-1955.71E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1[more]
RING1_GOSHI3.5e-1937.90E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
RDUF2_ARATH3.5e-1954.29E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1[more]
BLAST of MELO3C019481 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC10_CUCSA3.0e-11894.34Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214060 PE=4 SV=1[more]
V7BR96_PHAVU2.8e-3639.46Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G213500g PE=4 SV=1[more]
A0A022QH37_ERYGU5.5e-3237.01Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a025958mg PE=4 SV=1[more]
M5Y2G7_PRUPE9.4e-3233.84Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024978mg PE=4 S... [more]
C5XSW2_SORBI1.8e-2755.34Putative uncharacterized protein Sb04g034270 OS=Sorghum bicolor GN=Sb04g034270 P... [more]
BLAST of MELO3C019481 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68180.11.1e-3140.98 RING/U-box superfamily protein[more]
AT2G40830.22.1e-2240.87 RING-H2 finger C1A[more]
AT3G56580.23.5e-2251.85 RING/U-box superfamily protein[more]
AT3G19950.14.6e-2237.04 RING/U-box superfamily protein[more]
AT3G46620.18.7e-2155.71 zinc finger (C3HC4-type RING finger) family protein[more]
BLAST of MELO3C019481 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659112141|ref|XP_008456083.1|6.5e-127100.00PREDICTED: uncharacterized protein LOC103496124 isoform X2 [Cucumis melo][more]
gi|659112139|ref|XP_008456082.1|6.5e-127100.00PREDICTED: uncharacterized protein LOC103496124 isoform X1 [Cucumis melo][more]
gi|449464484|ref|XP_004149959.1|4.2e-11894.34PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus][more]
gi|778680186|ref|XP_011651266.1|4.2e-11894.34PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X3 [Cucumis sativus][more]
gi|700202433|gb|KGN57566.1|4.2e-11894.34hypothetical protein Csa_3G214060 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU63868melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019481T1MELO3C019481T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU63868MU63868transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 125..167
score: 8.1
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 126..166
score: 2.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 126..167
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 121..170
score: 1.4
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 26..215
score: 9.9
NoneNo IPR availablePANTHERPTHR22763:SF88RING/U-BOX DOMAIN-CONTAINING PROTEINcoord: 26..215
score: 9.9
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 107..171
score: 3.3