CsGy1G014860 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGTACTTCCATTCTCACCTTGTATAAATCTATCTAAGCTTGTTTGTGAAACCAAAGAAGGAAAAAAACTATAGACCCAAAAGAAATATATGTTTTTCAAACTCTTGACTTTACACACATCTCCATCCATTCAACCCTCTCTCTCTTTCTCTTCTATCTCTAGCAACAATGACGGTAAAGGATTGCGACCACCACCACCATCACGACTGCGAGCGCCGCCGTCTCTACCGGCGAATAGCCTGTGTCATCTTCACCGTGGTGCTTCTAATTGGCCTAGTCATCTTCCTCATCTGGGCCATCCTCCGACCGTCGAAGCCCCGTCTCATCCTCCAAGACGTCACCCTTCTTGGCCTTAATGTCTCGTCAGTGCCACCAGCCGCAATCTCGACAACCATGCAAATCACCATCTCCTCCCACAACCCCAACAACCGCATTGGTGTTTACTATCAGGTCATGGATGTCTACGCCGCGTACCGCGGCCAGCAAGTCACTCTCCCGACGCTCTTGCCGCCTACTTACCAGGGCCACAATGATGTTACTGTTTGGTCGCCGTTTTTGTATGGCGAAGCTGTGCCGGTGGCACCGGAATTTGCTGAAGCTTTGAATGAAGATAACAATGTTGGAGCCATGCTGTTCAATATTAAGGTCAATGGACAGGTTTGTTTATTTTCAACTCTCTGACTCACAAGTTCTTTATCTTTCTTTACATACCTTTTTCATAGCTTAACTTCTCATTTTAATGTTTAATTCTATACACATATTTTGTTATTTTAAAGCATAAAGCACTTAGGCTTTTAATCCTGGTAATGGAAGGTTTGAATCCTTCGTATCCTATTGTTGTATCTTTTGAGTCAATTCAAATTATTAAAATTGGCGTTCCAAATACTTATGGGAGGATTTAAATCTTTCTAACCTGGTCAGATGACATAAAGTTGAACTTTCGTCAAGTTAACATAAGAAGAGAAATTCGAAGAAAAGAAAGAAGTTGCATCTCTTGTTTGTAATTTAATATTTATTGTAGACTTTATCGTCGTATTGCACAACAGGTTAGATGGAAAGTCGGGAGCTGGATTTCGGGCAGATATCGGCTAAACGCGAACTGCCCGGCGTATATAAAGTTTGGTGATCCAAAGAATGGAATTGCTTTCGGACCCGCCATGAAGTTTCAGTTCGTTCAGGGCTGTTATGTTGATATTTGAGATCTCTCAAAGTCCCCTTTATTTGTACTTCTTTTTCTTTTTCCATGTTCCTTAAAAAGTATCTGTTAACGTAGTTACCAACAGCAATGAAAACTAATAGAATTTTAGTTATTCTTGATTATTTTGTTACTATTTTCATTGTGCCTCTCCTACAGTTTATCTCACCCTTTCCTTCTTCTTTCAGTGGTGAGCATTATTGATCAGTTTGGCGTCGTGTCTTAGCTCGATTTGACATTGATAAGCTTAAGTTAATAT CTTGTACTTCCATTCTCACCTTGTATAAATCTATCTAAGCTTGTTTGTGAAACCAAAGAAGGAAAAAAACTATAGACCCAAAAGAAATATATGTTTTTCAAACTCTTGACTTTACACACATCTCCATCCATTCAACCCTCTCTCTCTTTCTCTTCTATCTCTAGCAACAATGACGGTAAAGGATTGCGACCACCACCACCATCACGACTGCGAGCGCCGCCGTCTCTACCGGCGAATAGCCTGTGTCATCTTCACCGTGGTGCTTCTAATTGGCCTAGTCATCTTCCTCATCTGGGCCATCCTCCGACCGTCGAAGCCCCGTCTCATCCTCCAAGACGTCACCCTTCTTGGCCTTAATGTCTCGTCAGTGCCACCAGCCGCAATCTCGACAACCATGCAAATCACCATCTCCTCCCACAACCCCAACAACCGCATTGGTGTTTACTATCAGGTCATGGATGTCTACGCCGCGTACCGCGGCCAGCAAGTCACTCTCCCGACGCTCTTGCCGCCTACTTACCAGGGCCACAATGATGTTACTGTTTGGTCGCCGTTTTTGTATGGCGAAGCTGTGCCGGTGGCACCGGAATTTGCTGAAGCTTTGAATGAAGATAACAATGTTGGAGCCATGCTGTTCAATATTAAGGTCAATGGACAGGTTAGATGGAAAGTCGGGAGCTGGATTTCGGGCAGATATCGGCTAAACGCGAACTGCCCGGCGTATATAAAGTTTGGTGATCCAAAGAATGGAATTGCTTTCGGACCCGCCATGAAGTTTCAGTTCGTTCAGGGCTGTTATGTTGATATTTGAGATCTCTCAAAGTCCCCTTTATTTGTACTTCTTTTTCTTTTTCCATGTTCCTTAAAAAGTATCTGTTAACGTAGTTACCAACAGCAATGAAAACTAATAGAATTTTAGTTATTCTTGATTATTTTGTTACTATTTTCATTGTGCCTCTCCTACAGTTTATCTCACCCTTTCCTTCTTCTTTCAGTGGTGAGCATTATTGATCAGTTTGGCGTCGTGTCTTAGCTCGATTTGACATTGATAAGCTTAAGTTAATAT ATGACGGTAAAGGATTGCGACCACCACCACCATCACGACTGCGAGCGCCGCCGTCTCTACCGGCGAATAGCCTGTGTCATCTTCACCGTGGTGCTTCTAATTGGCCTAGTCATCTTCCTCATCTGGGCCATCCTCCGACCGTCGAAGCCCCGTCTCATCCTCCAAGACGTCACCCTTCTTGGCCTTAATGTCTCGTCAGTGCCACCAGCCGCAATCTCGACAACCATGCAAATCACCATCTCCTCCCACAACCCCAACAACCGCATTGGTGTTTACTATCAGGTCATGGATGTCTACGCCGCGTACCGCGGCCAGCAAGTCACTCTCCCGACGCTCTTGCCGCCTACTTACCAGGGCCACAATGATGTTACTGTTTGGTCGCCGTTTTTGTATGGCGAAGCTGTGCCGGTGGCACCGGAATTTGCTGAAGCTTTGAATGAAGATAACAATGTTGGAGCCATGCTGTTCAATATTAAGGTCAATGGACAGGTTAGATGGAAAGTCGGGAGCTGGATTTCGGGCAGATATCGGCTAAACGCGAACTGCCCGGCGTATATAAAGTTTGGTGATCCAAAGAATGGAATTGCTTTCGGACCCGCCATGAAGTTTCAGTTCGTTCAGGGCTGTTATGTTGATATTTGA MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLLGLNVSSVPPAAISTTMQITISSHNPNNRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGHNDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNANCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI
BLAST of CsGy1G014860 vs. NCBI nr
Match: XP_004139592.1 (PREDICTED: protein YLS9-like [Cucumis sativus] >KGN64967.1 hypothetical protein Csa_1G169420 [Cucumis sativus]) HSP 1 Score: 381.7 bits (979), Expect = 1.6e-102 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of CsGy1G014860 vs. NCBI nr
Match: XP_008463636.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]) HSP 1 Score: 377.9 bits (969), Expect = 2.3e-101 Identity = 211/213 (99.06%), Postives = 211/213 (99.06%), Query Frame = 0
BLAST of CsGy1G014860 vs. NCBI nr
Match: XP_022973165.1 (NDR1/HIN1-like protein 1 [Cucurbita maxima]) HSP 1 Score: 367.5 bits (942), Expect = 3.1e-98 Identity = 203/213 (95.31%), Postives = 209/213 (98.12%), Query Frame = 0
BLAST of CsGy1G014860 vs. NCBI nr
Match: XP_023520711.1 (NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 366.7 bits (940), Expect = 5.4e-98 Identity = 203/213 (95.31%), Postives = 208/213 (97.65%), Query Frame = 0
BLAST of CsGy1G014860 vs. NCBI nr
Match: XP_022927415.1 (NDR1/HIN1-like protein 1 [Cucurbita moschata]) HSP 1 Score: 365.9 bits (938), Expect = 9.1e-98 Identity = 202/213 (94.84%), Postives = 209/213 (98.12%), Query Frame = 0
BLAST of CsGy1G014860 vs. TAIR10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 221.5 bits (563), Expect = 5.0e-58 Identity = 102/177 (57.63%), Postives = 133/177 (75.14%), Query Frame = 0
BLAST of CsGy1G014860 vs. TAIR10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 214.2 bits (544), Expect = 8.1e-56 Identity = 101/180 (56.11%), Postives = 129/180 (71.67%), Query Frame = 0
BLAST of CsGy1G014860 vs. TAIR10
Match: AT3G11660.1 (NDR1/HIN1-like 1) HSP 1 Score: 213.0 bits (541), Expect = 1.8e-55 Identity = 95/175 (54.29%), Postives = 127/175 (72.57%), Query Frame = 0
BLAST of CsGy1G014860 vs. TAIR10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 184.5 bits (467), Expect = 6.8e-47 Identity = 84/172 (48.84%), Postives = 120/172 (69.77%), Query Frame = 0
BLAST of CsGy1G014860 vs. TAIR10
Match: AT2G35960.1 (NDR1/HIN1-like 12) HSP 1 Score: 181.8 bits (460), Expect = 4.4e-46 Identity = 85/177 (48.02%), Postives = 120/177 (67.80%), Query Frame = 0
BLAST of CsGy1G014860 vs. Swiss-Prot
Match: sp|Q9SRN0|NHL1_ARATH (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 3.2e-54 Identity = 95/175 (54.29%), Postives = 127/175 (72.57%), Query Frame = 0
BLAST of CsGy1G014860 vs. Swiss-Prot
Match: sp|Q9SJ54|NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 8.0e-45 Identity = 85/177 (48.02%), Postives = 120/177 (67.80%), Query Frame = 0
BLAST of CsGy1G014860 vs. Swiss-Prot
Match: sp|Q9FI03|NHL26_ARATH (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.5e-35 Identity = 62/154 (40.26%), Postives = 102/154 (66.23%), Query Frame = 0
BLAST of CsGy1G014860 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.4e-11 Identity = 43/150 (28.67%), Postives = 75/150 (50.00%), Query Frame = 0
BLAST of CsGy1G014860 vs. Swiss-Prot
Match: sp|Q9FNH6|NHL3_ARATH (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.4e-09 Identity = 44/162 (27.16%), Postives = 72/162 (44.44%), Query Frame = 0
BLAST of CsGy1G014860 vs. TrEMBL
Match: tr|A0A0A0LVW5|A0A0A0LVW5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169420 PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 1.1e-102 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of CsGy1G014860 vs. TrEMBL
Match: tr|A0A1S3CJQ5|A0A1S3CJQ5_CUCME (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103501736 PE=4 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 1.5e-101 Identity = 211/213 (99.06%), Postives = 211/213 (99.06%), Query Frame = 0
BLAST of CsGy1G014860 vs. TrEMBL
Match: tr|A0A1S3BNB5|A0A1S3BNB5_CUCME (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103491431 PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 2.1e-66 Identity = 119/173 (68.79%), Postives = 142/173 (82.08%), Query Frame = 0
BLAST of CsGy1G014860 vs. TrEMBL
Match: tr|A0A0A0KI64|A0A0A0KI64_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425840 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 2.7e-66 Identity = 119/173 (68.79%), Postives = 142/173 (82.08%), Query Frame = 0
BLAST of CsGy1G014860 vs. TrEMBL
Match: tr|A0A1U8JG64|A0A1U8JG64_GOSHI (NDR1/HIN1-Like protein 3 OS=Gossypium hirsutum OX=3635 GN=LOC107906673 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.6e-61 Identity = 111/180 (61.67%), Postives = 141/180 (78.33%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|