Cla011041 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla011041
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	NHL1 (Fragment) (AHRD V1 **-- B0LZM3_ARATH); contains Interpro domain(s) IPR010847 Harpin-induced 1
Location	Chr1 : 16528528 .. 16529828 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGTAAAGGATTGTGACCACCACCACCACCACGACTGCGAGCGCCGCCGTCTCTTCCACCGAATAGCCTGTGCCGTCTTCACCTTGGTCCTCCTGATTGGGTTAGTCATCTTCCTCATCTGGGCCATCCTCCGGCCGTCGAAGCCCCGCCTCATCCTCCAAGACGTCACCGTTTTTGGCCTGAACGTCTCGTCGGTGCCACCCACCGCCATCTCGACGACCATGCAGATCACCATCTCTTCCCACAACCCTAACACCCGCATTGGCATTTACTATCAGCTCATGGATGTCTACGCTGCCTACCGGGGCCAGCAGGTCACTCTCCCGACGCTGTTGCCGCCGACTTACCAAGGCCACAATGATGTTACCGTTTGGTCACCGTTTTTGTACGGTGAAGCTGTGCCGGTGGCGCCGCAGTTTGCTGAAGCTTTGAATGAGGATAACAATGTTGGAGCCATGCTGTTCAATATCAAGGTCAATGGACAGGTTTGTTCAATTTCTAATCTCACCCACAAGTTCTTTACCTTTCTTTAGATTCCATTTTCATAGCTAAACTTTTCATTTTCATTAATTTTAAATTTAATATTTACAAGTTTGGTTAAGAGCTTTTTCAAGTGTTGGTTTTGGTCTTTCAGTTTTTTATACATCTTATTTCGGTATTTCTAATTATAAAATAGTTCTATTTTGGTTATTAATTTTTTTTAAAAGAAAAACATAATATTTTGGCCTTCTTACGTTTAAACCTTTCTTTTTAAGTGATCATATATGAAACCACAATATGTTGGTTGGTCGAGTAGATATTAGGTGAAAAGATTATCATAATTTGAATGATAAGAATTTTTTTTTTCTTAGTTTTAAAAATAAATTATAGGTTAAAAAATACTTTTGGTCCCTAAACTTTTATGAAATCAACAACTTAGCCCTGAACTTTACTGTTAATAATTTAGTCCCTTAATTTTCAAATTTGTAGTGATTTTAATCTCAACTTTAATAAATAACTAGTACATGTACTTACCGTTTGTTATTTTGAAATTTGGTTGAAGTAAAACATACATTTTGAAATTTGTTGACAAGTTGAAAAAAAAAAAATCATCTTACAAAAGTAAGATGTAAACAGTATCTTAATACAAAAATTTGTTGAACAGGTTCGGTGGAAGGTCGGGAGCTGGATCTCAGGCAGATATCGACTAAACGCGAACTGTCCGGCATATATAAAGTTCGGCGACCCAAAGCATGGAATTGCATTTGGACCAGCAATGAAGTTTCAGTTTGTTCAAGGTTGCTATGTTGATATTTGA

mRNA sequence

ATGACAGTAAAGGATTGTGACCACCACCACCACCACGACTGCGAGCGCCGCCGTCTCTTCCACCGAATAGCCTGTGCCGTCTTCACCTTGGTCCTCCTGATTGGGTTAGTCATCTTCCTCATCTGGGCCATCCTCCGGCCGTCGAAGCCCCGCCTCATCCTCCAAGACGTCACCGTTTTTGGCCTGAACGTCTCGTCGGTGCCACCCACCGCCATCTCGACGACCATGCAGATCACCATCTCTTCCCACAACCCTAACACCCGCATTGGCATTTACTATCAGCTCATGGATGTCTACGCTGCCTACCGGGGCCAGCAGGTCACTCTCCCGACGCTGTTGCCGCCGACTTACCAAGGCCACAATGATGTTACCGTTTGGTCACCGTTTTTGTACGGTGAAGCTGTGCCGGTGGCGCCGCAGTTTGCTGAAGCTTTGAATGAGGATAACAATGTTGGAGCCATGCTGTTCAATATCAAGGTCAATGGACAGGTTCGGTGGAAGGTCGGGAGCTGGATCTCAGGCAGATATCGACTAAACGCGAACTGTCCGGCATATATAAAGTTCGGCGACCCAAAGCATGGAATTGCATTTGGACCAGCAATGAAGTTTCAGTTTGTTCAAGGTTGCTATGTTGATATTTGA

Coding sequence (CDS)

ATGACAGTAAAGGATTGTGACCACCACCACCACCACGACTGCGAGCGCCGCCGTCTCTTCCACCGAATAGCCTGTGCCGTCTTCACCTTGGTCCTCCTGATTGGGTTAGTCATCTTCCTCATCTGGGCCATCCTCCGGCCGTCGAAGCCCCGCCTCATCCTCCAAGACGTCACCGTTTTTGGCCTGAACGTCTCGTCGGTGCCACCCACCGCCATCTCGACGACCATGCAGATCACCATCTCTTCCCACAACCCTAACACCCGCATTGGCATTTACTATCAGCTCATGGATGTCTACGCTGCCTACCGGGGCCAGCAGGTCACTCTCCCGACGCTGTTGCCGCCGACTTACCAAGGCCACAATGATGTTACCGTTTGGTCACCGTTTTTGTACGGTGAAGCTGTGCCGGTGGCGCCGCAGTTTGCTGAAGCTTTGAATGAGGATAACAATGTTGGAGCCATGCTGTTCAATATCAAGGTCAATGGACAGGTTCGGTGGAAGGTCGGGAGCTGGATCTCAGGCAGATATCGACTAAACGCGAACTGTCCGGCATATATAAAGTTCGGCGACCCAAAGCATGGAATTGCATTTGGACCAGCAATGAAGTTTCAGTTTGTTCAAGGTTGCTATGTTGATATTTGA

Protein sequence

MTVKDCDHHHHHDCERRRLFHRIACAVFTLVLLIGLVIFLIWAILRPSKPRLILQDVTVFGLNVSSVPPTAISTTMQITISSHNPNTRIGIYYQLMDVYAAYRGQQVTLPTLLPPTYQGHNDVTVWSPFLYGEAVPVAPQFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNANCPAYIKFGDPKHGIAFGPAMKFQFVQGCYVDI

Homology

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BLAST of Cla011041 vs. Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.5e-48
Identity = 95/214 (44.39%), Postives = 135/214 (63.08%), Query Frame = 1


Query: 1   MTVKDCDHHHHHDCERRRLFHRIACAVFTLVLLIGLVIFLIWAILRPSKPRLILQDVTVF 60
           MT KDC +H            RI   +   ++++ + IFL+W IL+P+KPR ILQD TV+
Sbjct: 1   MTTKDCGNHGGGGGGGTA--SRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVY 60

Query: 61  GLNVSSVPPTAISTTMQITISSHNPNTRIGIYYQLMDVYAAYRGQQVTLPTLLPPTYQGH 120
             N+S   P  +++  QITI+S N N+RIGIYY  + VYA YR QQ+TL T +PPTYQGH
Sbjct: 61  AFNLSQ--PNLLTSNFQITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPQFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
            +  VWSPF+YG +VP+AP  A AL ++ N G +   I+ +G+VRWKVG+ I+G+Y L+ 
Sbjct: 121 KEDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHV 180

Query: 181 NCPAYIKFGDPKHGIAFGP-AMKFQFVQGCYVDI 214
            C A+I   D   G+  G  A+K+  +  C V++
Sbjct: 181 RCQAFINLADKAAGVHVGENAVKYMLINKCSVNV 210

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BLAST of Cla011041 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.6e-13
Identity = 45/158 (28.48%), Postives = 81/158 (51.27%), Query Frame = 1


Query: 27  VFTLVLLIGLVIFLIWAILRPSKPRLILQDVTVFGLNVSSVPPTAISTTMQITISSHNPN 86
           + +L++++G+   + W I+RP   +  + D ++   + +S P   +   + +T+   NPN
Sbjct: 45  IISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTS-PDNILRYNLALTVPVRNPN 104

Query: 87  TRIGIYYQLMDVYAAYRGQQVTLPTLLPPTYQGHNDVTVWSPFLYGEAVPV--APQFAEA 146
            RIG+YY  ++ +A Y G++ +  T L P YQGH + TV +P   G+ + +  A Q +  
Sbjct: 105 KRIGLYYDRIEAHAYYEGKRFSTIT-LTPFYQGHKNTTVLTPTFQGQNLVIFNAGQ-SRT 164

Query: 147 LNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNANC 183
           LN +   G     IK   +VR+K+G     R +   +C
Sbjct: 165 LNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDC 199

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BLAST of Cla011041 vs. TrEMBL
Match: A0A0A0LVW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G169420 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.2e-116
Identity = 200/213 (93.90%), Postives = 208/213 (97.65%), Query Frame = 1


Query: 1   MTVKDCDHHHHHDCERRRLFHRIACAVFTLVLLIGLVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHHDCERRRL+ RIAC +FT+VLLIGLVIFLIWAILRPSKPRLILQDVT+ 
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  GLNVSSVPPTAISTTMQITISSHNPNTRIGIYYQLMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNVSSVPP AISTTMQITISSHNPN RIG+YYQ+MDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQITISSHNPNNRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPQFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
           NDVTVWSPFLYGEAVPVAP+FAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKHGIAFGPAMKFQFVQGCYVDI 214
           NCPAYIKFGDPK+GIAFGPAMKFQFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 213

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BLAST of Cla011041 vs. TrEMBL
Match: A0A0A0KI64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425840 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.1e-74
Identity = 132/213 (61.97%), Postives = 165/213 (77.46%), Query Frame = 1


Query: 1   MTVKDCDHHHHHDCERRRLFHRIACAVFTLVLLIGLVIFLIWAILRPSKPRLILQDVTVF 60
           M+ KD     HH+ + ++   R+   +  L++++G++IF++WA+LRPSKP  ILQDVTVF
Sbjct: 1   MSAKDDKDCGHHEDDYQQFLRRLGIVLLILIIIVGIIIFIVWAVLRPSKPHFILQDVTVF 60

Query: 61  GLNVSSVPPTAISTTMQITISSHNPNTRIGIYYQLMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLN +SV P  +S  +Q+TISS NPN RIGIYY  MDVY AYRGQQVTLPTLLP TYQGH
Sbjct: 61  GLN-ASVTPNLLSLDLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPQFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
            DV VWSPFL G+AVPVAP  A +L +D NVGA+LFN+K++GQV+WKVG+WISGRY LN 
Sbjct: 121 RDVVVWSPFLSGDAVPVAPDVAMSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNV 180

Query: 181 NCPAYIKFGDPKHGIAFGPAMKFQFVQGCYVDI 214
           NCPA+IKFG+P   IA G AMKFQ VQ C V++
Sbjct: 181 NCPAFIKFGNPDRAIAIGSAMKFQIVQSCNVEV 212

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BLAST of Cla011041 vs. TrEMBL
Match: A0A068UGU2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00023887001 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.9e-68
Identity = 121/213 (56.81%), Postives = 157/213 (73.71%), Query Frame = 1


Query: 1   MTVKDCDHHHHHDCERRRLFHRIACAVFTLVLLIGLVIFLIWAILRPSKPRLILQDVTVF 60
           M+ KDC H+ H   E+R+LF R+  A+   ++LI  +I L+W ILRP+KP  +LQD TV+
Sbjct: 1   MSAKDCGHYEH---EQRKLFRRLFVALLAFIILILFIILLVWLILRPTKPHFLLQDATVY 60

Query: 61  GLNVSSVPPTAISTTMQITISSHNPNTRIGIYYQLMDVYAAYRGQQVTLPTLLPPTYQGH 120
             NVS+  P  +++  QIT+SS NPN RIGI Y  +D YA+YRGQQ+TLPTLLP TYQGH
Sbjct: 61  AFNVSA--PNLLTSNFQITLSSRNPNDRIGISYDRLDAYASYRGQQITLPTLLPSTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPQFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
            D+TVWSPFLYG +VP+AP + +AL +D   G +L NIKVNG+VRWKVG++ISGRY L  
Sbjct: 121 KDITVWSPFLYGNSVPIAPYYTDALTQDQFAGTVLINIKVNGRVRWKVGTFISGRYHLYV 180

Query: 181 NCPAYIKFGDPKHGIAFGPAMKFQFVQGCYVDI 214
           NCPAYI  G+   GI  GPA+K+Q VQ C+VD+
Sbjct: 181 NCPAYINLGNRNSGIMVGPAIKYQLVQSCHVDV 208

[Close]

BLAST of Cla011041 vs. TrEMBL
Match: A0A0D2QBT8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G083100 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.0e-67
Identity = 122/213 (57.28%), Postives = 158/213 (74.18%), Query Frame = 1


Query: 1   MTVKDCDHHHHHDCERRRLFHRIACAVFTLVLLIGLVIFLIWAILRPSKPRLILQDVTVF 60
           M+ KDC HH     +  +L  RI  A+  + +++G++IFL+WAIL P KPR ILQDVT++
Sbjct: 1   MSAKDCGHHD----DEEQLAKRITVAIVGVFVVVGIIIFLVWAILHPDKPRFILQDVTIY 60

Query: 61  GLNVSSVPPTAISTTMQITISSHNPNTRIGIYYQLMDVYAAYRGQQVTLPTLLPPTYQGH 120
             N+++  P  +++ MQIT+SS NPN RIGIYYQ +D++A+Y  QQ+TLPTL+P TYQGH
Sbjct: 61  AFNLTA--PNMLTSNMQITLSSRNPNDRIGIYYQKLDIFASYHNQQITLPTLVPRTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPQFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
            DVTVWSPFLYG AVPVAP   E L++D N G +L NIKV GQ++WKVG+WISGRY++NA
Sbjct: 121 LDVTVWSPFLYGNAVPVAPFLEEGLSQDMNTGMVLLNIKVYGQLKWKVGTWISGRYQINA 180

Query: 181 NCPAYIKFGDPKHGIAFGPAMKFQFVQGCYVDI 214
           NCPAYI F D    I  G AMK+Q VQ C VD+
Sbjct: 181 NCPAYISFTDRTKAIQVGSAMKYQLVQTCTVDV 207

[Close]

BLAST of Cla011041 vs. TrEMBL
Match: V4RS29_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029271mg PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.9e-66
Identity = 122/215 (56.74%), Postives = 160/215 (74.42%), Query Frame = 1


Query: 1   MTVKDCDHHHHHDCERRRLFHRIACAVFTLVLLIGLVIFLIWAILRPSKPRLILQDVTVF 60
           M+ KDC H H    ++++L   I  AV  L++++ L+IFL WAI RPSKP  ILQD T++
Sbjct: 1   MSEKDCGHSHD---DKKKLVRLILYAVGGLIIVVLLIIFLFWAITRPSKPSFILQDATLY 60

Query: 61  GLNVSS--VPPTAISTTMQITISSHNPNTRIGIYYQLMDVYAAYRGQQVTLPTLLPPTYQ 120
             N+S+   PP A++T +Q+TI++ NPN +IGIYYQ  DVYA+YR QQ++L TLLP TYQ
Sbjct: 61  AFNLSTGPSPPNALTTNLQVTITTRNPNDKIGIYYQKADVYASYRNQQISLATLLPATYQ 120

Query: 121 GHNDVTVWSPFLYGEAVPVAPQFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRL 180
           GH DV VWSPFLYG +VPV+P  AEAL +D N G ++ NIKV+G+++WKVG+WISGRY L
Sbjct: 121 GHKDVIVWSPFLYGNSVPVSPFVAEALGQDLNAGMVMVNIKVDGRIKWKVGTWISGRYHL 180

Query: 181 NANCPAYIKFGDPKHGIAFGPAMKFQFVQGCYVDI 214
           + NCPAYI FGD   GIA G ++KFQ VQ C VD+
Sbjct: 181 HVNCPAYITFGDKSKGIASGASVKFQLVQSCSVDV 212

[Close]

BLAST of Cla011041 vs. NCBI nr
Match: gi|449443654|ref|XP_004139592.1| (PREDICTED: protein YLS9-like [Cucumis sativus])

HSP 1 Score: 427.2 bits (1097), Expect = 1.7e-116
Identity = 200/213 (93.90%), Postives = 208/213 (97.65%), Query Frame = 1


Query: 1   MTVKDCDHHHHHDCERRRLFHRIACAVFTLVLLIGLVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHHDCERRRL+ RIAC +FT+VLLIGLVIFLIWAILRPSKPRLILQDVT+ 
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  GLNVSSVPPTAISTTMQITISSHNPNTRIGIYYQLMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNVSSVPP AISTTMQITISSHNPN RIG+YYQ+MDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQITISSHNPNNRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPQFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
           NDVTVWSPFLYGEAVPVAP+FAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKHGIAFGPAMKFQFVQGCYVDI 214
           NCPAYIKFGDPK+GIAFGPAMKFQFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 213

[Close]

BLAST of Cla011041 vs. NCBI nr
Match: gi|659127309|ref|XP_008463636.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 426.0 bits (1094), Expect = 3.8e-116
Identity = 199/213 (93.43%), Postives = 208/213 (97.65%), Query Frame = 1


Query: 1   MTVKDCDHHHHHDCERRRLFHRIACAVFTLVLLIGLVIFLIWAILRPSKPRLILQDVTVF 60
           MTVKDCDHHHHHDCERRRL+ RIAC +F+L+LLIGLVIFLIWAILRPSKPRLILQDVT+ 
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFSLLLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  GLNVSSVPPTAISTTMQITISSHNPNTRIGIYYQLMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNVSSVPP AISTTMQITISSHNPNTRIG+YYQ+MDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQITISSHNPNTRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPQFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
           NDVTVWSPFLYGEAVPVAP+FAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKHGIAFGPAMKFQFVQGCYVDI 214
           NCPAYIKFGDPK+GIAFGP MKFQFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPTMKFQFVQGCYVDI 213

[Close]

BLAST of Cla011041 vs. NCBI nr
Match: gi|449444813|ref|XP_004140168.1| (PREDICTED: protein YLS9-like [Cucumis sativus])

HSP 1 Score: 287.7 bits (735), Expect = 1.6e-74
Identity = 132/213 (61.97%), Postives = 165/213 (77.46%), Query Frame = 1


Query: 1   MTVKDCDHHHHHDCERRRLFHRIACAVFTLVLLIGLVIFLIWAILRPSKPRLILQDVTVF 60
           M+ KD     HH+ + ++   R+   +  L++++G++IF++WA+LRPSKP  ILQDVTVF
Sbjct: 1   MSAKDDKDCGHHEDDYQQFLRRLGIVLLILIIIVGIIIFIVWAVLRPSKPHFILQDVTVF 60

Query: 61  GLNVSSVPPTAISTTMQITISSHNPNTRIGIYYQLMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLN +SV P  +S  +Q+TISS NPN RIGIYY  MDVY AYRGQQVTLPTLLP TYQGH
Sbjct: 61  GLN-ASVTPNLLSLDLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPQFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
            DV VWSPFL G+AVPVAP  A +L +D NVGA+LFN+K++GQV+WKVG+WISGRY LN 
Sbjct: 121 RDVVVWSPFLSGDAVPVAPDVAMSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNV 180

Query: 181 NCPAYIKFGDPKHGIAFGPAMKFQFVQGCYVDI 214
           NCPA+IKFG+P   IA G AMKFQ VQ C V++
Sbjct: 181 NCPAFIKFGNPDRAIAIGSAMKFQIVQSCNVEV 212

[Close]

BLAST of Cla011041 vs. NCBI nr
Match: gi|659097380|ref|XP_008449594.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 285.4 bits (729), Expect = 8.1e-74
Identity = 132/210 (62.86%), Postives = 163/210 (77.62%), Query Frame = 1


Query: 4   KDCDHHHHHDCERRRLFHRIACAVFTLVLLIGLVIFLIWAILRPSKPRLILQDVTVFGLN 63
           KDC H    D + ++   R+   +  L++++G++IF++WA+LRPSKP  ILQDVTVFGLN
Sbjct: 7   KDCGH----DDDYQQFLRRLGIVLLILIIIVGIIIFIVWAVLRPSKPHFILQDVTVFGLN 66

Query: 64  VSSVPPTAISTTMQITISSHNPNTRIGIYYQLMDVYAAYRGQQVTLPTLLPPTYQGHNDV 123
            +SV P  +S  +Q+TISS NPN RIGIYY  MDVY AYRGQQVTLPTLLP TYQGH DV
Sbjct: 67  -ASVSPNLLSLNLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGHRDV 126

Query: 124 TVWSPFLYGEAVPVAPQFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNANCP 183
            VWSPFL G+AVPVAP  A +L +D NVGA+LFN+K++GQV+WKVG+WISGRY LN NCP
Sbjct: 127 VVWSPFLSGDAVPVAPDVAMSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNCP 186

Query: 184 AYIKFGDPKHGIAFGPAMKFQFVQGCYVDI 214
           A+IKFG+P   IA G AMKFQ VQ C V++
Sbjct: 187 AFIKFGNPDRAIAIGSAMKFQIVQSCNVEV 211

[Close]

BLAST of Cla011041 vs. NCBI nr
Match: gi|661889271|emb|CDP06858.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 265.0 bits (676), Expect = 1.1e-67
Identity = 121/213 (56.81%), Postives = 157/213 (73.71%), Query Frame = 1


Query: 1   MTVKDCDHHHHHDCERRRLFHRIACAVFTLVLLIGLVIFLIWAILRPSKPRLILQDVTVF 60
           M+ KDC H+ H   E+R+LF R+  A+   ++LI  +I L+W ILRP+KP  +LQD TV+
Sbjct: 1   MSAKDCGHYEH---EQRKLFRRLFVALLAFIILILFIILLVWLILRPTKPHFLLQDATVY 60

Query: 61  GLNVSSVPPTAISTTMQITISSHNPNTRIGIYYQLMDVYAAYRGQQVTLPTLLPPTYQGH 120
             NVS+  P  +++  QIT+SS NPN RIGI Y  +D YA+YRGQQ+TLPTLLP TYQGH
Sbjct: 61  AFNVSA--PNLLTSNFQITLSSRNPNDRIGISYDRLDAYASYRGQQITLPTLLPSTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPQFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
            D+TVWSPFLYG +VP+AP + +AL +D   G +L NIKVNG+VRWKVG++ISGRY L  
Sbjct: 121 KDITVWSPFLYGNSVPIAPYYTDALTQDQFAGTVLINIKVNGRVRWKVGTFISGRYHLYV 180

Query: 181 NCPAYIKFGDPKHGIAFGPAMKFQFVQGCYVDI 214
           NCPAYI  G+   GI  GPA+K+Q VQ C+VD+
Sbjct: 181 NCPAYINLGNRNSGIMVGPAIKYQLVQSCHVDV 208

The following BLAST results are available for this feature:

BLAST of Cla011041 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NHL12_ARATH	1.5e-48	44.39	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1	[more]
YLS9_ARATH	3.6e-13	28.48	Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1	[more]

BLAST of Cla011041 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVW5_CUCSA	1.2e-116	93.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G169420 PE=4 SV=1	[more]
A0A0A0KI64_CUCSA	1.1e-74	61.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G425840 PE=4 SV=1	[more]
A0A068UGU2_COFCA	7.9e-68	56.81	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00023887001 PE=4 SV=1	[more]
A0A0D2QBT8_GOSRA	3.0e-67	57.28	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G083100 PE=4 SV=1	[more]
V4RS29_9ROSI	1.9e-66	56.74	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029271mg PE=4 SV=1	[more]

BLAST of Cla011041 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443654\|ref\|XP_004139592.1\|	1.7e-116	93.90	PREDICTED: protein YLS9-like [Cucumis sativus]	[more]
gi\|659127309\|ref\|XP_008463636.1\|	3.8e-116	93.43	PREDICTED: protein YLS9-like [Cucumis melo]	[more]
gi\|449444813\|ref\|XP_004140168.1\|	1.6e-74	61.97	PREDICTED: protein YLS9-like [Cucumis sativus]	[more]
gi\|659097380\|ref\|XP_008449594.1\|	8.1e-74	62.86	PREDICTED: protein YLS9-like [Cucumis melo]	[more]
gi\|661889271\|emb\|CDP06858.1\|	1.1e-67	56.81	unnamed protein product [Coffea canephora]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006952	defense response
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004871	signal transducer activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla011041	Cla011041.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 79..182 score: 8.8
None	No IPR available	PANTHER	PTHR31415	FAMILY NOT NAMED	coord: 1..213 score: 1.2E
None	No IPR available	PANTHER	PTHR31415:SF17	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 1..213 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla011041	Cla97C01G011240	Watermelon (97103) v2	wmwmbB246
Cla011041	Csa1G169420	Cucumber (Chinese Long) v2	cuwmB042
Cla011041	MELO3C025577	Melon (DHL92) v3.5.1	mewmB173
Cla011041	ClCG01G011600	Watermelon (Charleston Gray)	wcgwmB155
Cla011041	CSPI01G15080	Wild cucumber (PI 183967)	cpiwmB044
Cla011041	Cucsa.319610	Cucumber (Gy14) v1	cgywmB581
Cla011041	CmaCh13G003440	Cucurbita maxima (Rimu)	cmawmB202
Cla011041	CmoCh13G003670	Cucurbita moschata (Rifu)	cmowmB189
Cla011041	Lsi02G011930	Bottle gourd (USVL1VR-Ls)	lsiwmB205
Cla011041	CsGy1G014860	Cucumber (Gy14) v2	cgybwmB043
Cla011041	MELO3C025577.2	Melon (DHL92) v3.6.1	medwmB161
Cla011041	CsaV3_1G015180	Cucumber (Chinese Long) v3	cucwmB049
Cla011041	BhiUN452G21	Wax gourd	wgowmB531

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla011041	Silver-seed gourd	carwmB0002
Cla011041	Cucurbita maxima (Rimu)	cmawmB386
Cla011041	Cucurbita pepo (Zucchini)	cpewmB014