CsGy1G007320 (gene) Cucumber (Gy14) v2

NameCsGy1G007320
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionNascent polypeptide-associated complex subunit beta
LocationChr1 : 4695311 .. 4699940 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATTTTTGGTATATATTTTTGGATTTTCCACTACTCGAGGTGAGGTTAAATCCCAACCGTTGGATCAGCTTGATAAATATCACCATCTTCGTCGCGCCCTAATATATGAAGCATTAGCGCCGTCTCATACTGAGGCTATCTTCTACCTCTTCAAACCACTGAGACTCAAAAACCTCAATATCACCTTCAAGGTAGAACTCTTCCTTCCATTTTCGCTTCACTTCTCATCGTTATCTCAATCCTCTCTTGTTCTTTCTATTTTCGGATTGCTCTTCTTCATCTTCGACGATGAATTTCTTCTGCCGAGGGTTCTACTGTTGTGTTTTTTCATTTTATAGCCGGATTTTGTTTTTGCTTCTTTTGAGGCGTTCGCGTTCATCGATTTGATATGTATTTATGTCTTTGAAACTTCTCGTCATTGATTTTCGTCTTTATATGTTAAACTTGTTTGTGTTATTGAATTTATTGATTACTTTACAGATCGTGTTTGTGTCTATACCATCTGTAAGCGTTCTTCGATTGTGAGTTTAGAAGTGAAGTAAAGAACAGCTTAGGTTAGAGGATTTAGTGTAGCCGTAGTTACTGTACTGAACAGGAGCTTACATTACATGAACATTACATTTCTTGTATTTTTCTCAGCGATTGTGATAAATGATGAACGGATAAATTTATACCTTGATAATGTTCAAGGTAGACCTCTTCCTTCCATTTTCGGATTGCTTTTCTTCATCTTCGACGATGAACATCATCTGCCGAGGGTTCTACTGTGGCGTATTTTCATTTTCTAACCGGATTTTGTTTTTACTTCTGTTGAGGTGTTTGTGTTCATCGATTTGATATGTATGTACGTGTTTGAAACTTCTCGTTATTCATTTCTTTGTGTAATTGGCTTTCTTGATTATTTTACAGAACGTGTTTTAATCTTCACTTCTCATCGTTATCTAAATCTTCTCTTGTTCTTACTCATTTCGGATTGCTCTTCTTCATCTTCGACGATGGACTTCTTATGCCGAGGTGTTTGTGTTATTGGATTTCTTGATTATTTTACAGAACGTGTTTAAATCTCTACTGTTCTTTAATTGCGTTTTTCGATTGTGAGTTTAGAAGTGAAGGAAAGAACAGCTTAGGTTATAGGATTTAGTGGAGCTGAAGTTACTGTACGGATGAGGAGCTTACATTTCATGAACATTATATTTTTTGTATTTTTCTCAAAGATTATGATAACACGATGAACAGATAATTTATACTATAGAAATTAACTTTTTGGATAAGCTAGGGCTTGATAACGTATTCTAGTGCTGTTTTCCTTTTAGATACTGCAACTATTACATGAATTTTCGGATGAGATTTCTGTTTGTTATAGTTTTTAAAAAACGTGACGAAGCACCTGTATGTGTTTATCTGTTTTAAATTTCTTTTCTTCGTTAGCGCTTTTATGTTCTTTAATTGCTGTAATATTTCAAGTTCGAATGTAGTTTTTAATCATTTTTCAAGTTCTCAATTCTCATAAATTTTATCCTTTTTGTTTCATATTAAAAGAAACAATCTCATAAATCTTATCCTTGTTCTTCCTATGTTGTGCAGATGGATCATACGAAGCTCCAGAAAATGGCTGGTGCAGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGTTGGTTGCCTTTTTATCTTTTGAAAGTTCCGAAAAGTGTAAGAAGATTTAATCATTTGTCGCTTGATTTATTTAATAAGGAATCATAAATTATTTCAACCGTAAGATGGAACTCTTATAAAATTTACCTGGATGTTTATCATTCTAGTTTTTTTTTGGTAAATAATTTATTTGAACCATGCTGATATCCATTCTCCCATCCATTTCTGCTTTTCTCAATTCTCTCATTCATCGTTCTATTAATTTCAGCCATGCATTTTTATACTAACTAAGAATTTCAATAGCTCGTAGTTATTCTTAAAATTTCTGATATGCAGATAATGTTTTACGACAACATATATAATTTTTCTTTTTCCAATTTTTGTCAATTTAAATGGTACTTTTTAATTGACTAATGAGTGAATATACTAACATAAATTCCATGCTTGTTTGAGTGTTGGATCTTTCAGTTTGGCATATGTTCTTGATATTTCTCGTGCTTACTGTAATGGAGGCGCTGTTGAAATATCATTTTCATCTTCTTTTCTTTAAGATCAATCGTTTGCTTTCTTAATTTTTAGTTTTCTTTCTTATTTTGTCAATTAAAGGAAGAAGAAGGCTGTCCACAAGACAACTACCACAGACGATAAACGGCTTCAAAGTACCTTGAAGAGAATAGGAGTTAATGCAATCCCTGCTATTGAGGAAGTCAACATTTTCAAGGATGATGTAGTTATTCAATTTACTAACCCAAAGGGTAAATTTATGCAACTATATATATACGCATGGTTGTTTACCATCAATATCTTGATATGAAATTCATTTAGTTGTTTCTTGTTATCTATTTCAGTTCAGGCTTCTATTGCGGCAAACACATGGGTTGTTAGTGGTTCTCCTCAAACGAAAAGTATGTCTTCTTACTCTCACCACATTTGCATATAATAAACATTTAACTGATCTCATGTTCTAAATTCTAGGGCATTCTTGTAGTAGATATATCGAAAAAACTGAAACAATTTTTTCTTGCAAATTTTGGTCATACGTTTTAAAAAGAACAAATAGTCCCTAAATGAAAATGACACTACAGAGATGTCAACAGACTTGGCTGTTAGTAATATAACTTCTCCTATTTAATTGTATAATCAATATTGCTACCCTATTATTTCAATCATTCTTTGATATCTCAAACCATTTTTAATACAGTGATGAATATTAATTATCGAAAGTTTTCCTAAAGTGCTGTCATTTGATGAAAAAACCACCGCTTACTTTTGTAAGACCAAATTTTGTTATTTGATGAGAAAAAAAAGCTTTATTTGAACGGTTACATGTTTGTAGCTGTATTGACAATGCTGTTGATTGTACACGAACCTTCAAGTATGTTTAGGAATTTAATATGATTAGTACACTGTATCGTTTGAATTAAATATGAAGCTATTCTAATGAAGCATGTTACAAAATAGCCTTGAAACTTTTTCAGATAGTTCTTTTTAGAAAATTTAAATTAGTCTTGAATCTCTTATCCTTTTTTCTTCTTCTTTTAATGTGCTTTTGGAATGCGGTAAAGTTCTTCGGGATTAGGATAATATTGTAAATGATCTAATGCAAAATAACATGCTGCCTGCTGATGACTGCCGTTGGCTTGGAATTTGAAACAAGGCTAATATGGTTTCCTTCAACTATGTGTAAAACAAAGGGTTTACTTCAATTGTGACATTTGATGTGACAGTATTTTTTTTAACATGTTTGAAGGAGTACACTTTGTTAATTTATTGAATGAATGCGTTCTTACCAAAAGTTATTTCAAAAAGTCATGCTAGAGAATGACACTTCCTAGTTGCCTCTCTTAGGGTGGCATCTTCATGCTAGAAAATGACACTCCGCATACATTTTTTTTCTTCCCTCAATTAAAAAGATGTTTTCATATAAGGAAAACAAACATGGCATTGGGTGTTTTAGTTTTGACTTGTTTGTTTCTCATGGTGAAGCTTTTCTATTAACTCTGGCCAAGATTTTCATTGCGCTATTTGCCTATCTTTTGTTATTATGTATCACGACCAGCTCTAATATTTTAATTTCTTCTCTCAGAATTGCAGGATATTCTGCCCGGAATTATCAACCAATTGGGTAAGTACACGTGATTGCATTTTTGTGTTCCATCCTGAGTCCTACCTAAAATAACAAGACTTGTTTACGTGTTTAAATTTTAGGACCCGATAACTTAGACAACTTGAGGAAGTTGGCTGAGCAGTTCCAGAAGCAAGCACCTGGAGTAGGTGCTGGTGCAGCAGCAGCTGCCGCCAATGGTGAGGATGATGACGATGATGTTCCTGACCTTGTTGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGAAGCAAGCCTCCTAGATAGAGGAGTTCGTTCCCAGATGATTTTGTTTAGCTTTTCTTTATTTTTTCTCTTTACATAATTTTAAAATGCTTGGGAAGAGTTCCATTTTTCTCCGTGTATTTGCTTTTTGCTAATCTTTGTTCCCCCTACCCCATCTTGCTCACATGTAACTTCCCCGATGAATGGATTTTCGATTGCCTGCCCCCTCCCCCTTCAACTGCCTTAATTCCTCTGAGTAATGTTTTTCATATTTTTAAGGTGCGGAATTTATAGGAAAAATATGGGGATTAAAGTTTAAGGTCAGCTTTGTATTTGAATATGTTAAGGTATGCTTATTAAGTAATCATTTCCCCCTCTTCTCACCTCTTCGTGCTGTTAAATTTTACAACGGATATTAGTATCTTTATTTATTAGATTTCTGATAAGTTCCATTGGTCAAAAAATTAAAATGTTGTGTGATTGAATTAGCTATATCTGGGTGATTTTTCTGAATCTTTATGATTTTTGTTAGTTAACGTACCTAACTCTCTCACCTCACATTCGGAGTAGATCGAATAATGCCAAAATATTGATTAGAATAATTTGTAATGTACTTCTAAGAGAAATGAGAGGAGAGAATAGATGCG

mRNA sequence

GAATTTTTGGTATATATTTTTGGATTTTCCACTACTCGAGGTGAGGTTAAATCCCAACCGTTGGATCAGCTTGATAAATATCACCATCTTCGTCGCGCCCTAATATATGAAGCATTAGCGCCGTCTCATACTGAGGCTATCTTCTACCTCTTCAAACCACTGAGACTCAAAAACCTCAATATCACCTTCAAGATGGATCATACGAAGCTCCAGAAAATGGCTGGTGCAGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGAAGAAGAAGGCTGTCCACAAGACAACTACCACAGACGATAAACGGCTTCAAAGTACCTTGAAGAGAATAGGAGTTAATGCAATCCCTGCTATTGAGGAAGTCAACATTTTCAAGGATGATGTAGTTATTCAATTTACTAACCCAAAGGTTCAGGCTTCTATTGCGGCAAACACATGGGTTGTTAGTGGTTCTCCTCAAACGAAAAAATTGCAGGATATTCTGCCCGGAATTATCAACCAATTGGGACCCGATAACTTAGACAACTTGAGGAAGTTGGCTGAGCAGTTCCAGAAGCAAGCACCTGGAGTAGGTGCTGGTGCAGCAGCAGCTGCCGCCAATGGTGAGGATGATGACGATGATGTTCCTGACCTTGTTGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGAAGCAAGCCTCCTAGATAGAGGAGTTCGTTCCCAGATGATTTTGTTTAGCTTTTCTTTATTTTTTCTCTTTACATAATTTTAAAATGCTTGGGAAGAGTTCCATTTTTCTCCGTGTATTTGCTTTTTGCTAATCTTTGTTCCCCCTACCCCATCTTGCTCACATGTAACTTCCCCGATGAATGGATTTTCGATTGCCTGCCCCCTCCCCCTTCAACTGCCTTAATTCCTCTGAGTAATGTTTTTCATATTTTTAAGGTGCGGAATTTATAGGAAAAATATGGGGATTAAAGTTTAAGGTCAGCTTTGTATTTGAATATGTTAAGGTATGCTTATTAAGTAATCATTTCCCCCTCTTCTCACCTCTTCGTGCTGTTAAATTTTACAACGGATATTAGTATCTTTATTTATTAGATTTCTGATAAGTTCCATTGGTCAAAAAATTAAAATGTTGTGTGATTGAATTAGCTATATCTGGGTGATTTTTCTGAATCTTTATGATTTTTGTTAGTTAACGTACCTAACTCTCTCACCTCACATTCGGAGTAGATCGAATAATGCCAAAATATTGATTAGAATAATTTGTAATGTACTTCTAAGAGAAATGAGAGGAGAGAATAGATGCG

Coding sequence (CDS)

GAATTTTTGGTATATATTTTTGGATTTTCCACTACTCGAGGTGAGGTTAAATCCCAACCGTTGGATCAGCTTGATAAATATCACCATCTTCGTCGCGCCCTAATATATGAAGCATTAGCGCCGTCTCATACTGAGGCTATCTTCTACCTCTTCAAACCACTGAGACTCAAAAACCTCAATATCACCTTCAAGATGGATCATACGAAGCTCCAGAAAATGGCTGGTGCAGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGAAGAAGAAGGCTGTCCACAAGACAACTACCACAGACGATAAACGGCTTCAAAGTACCTTGAAGAGAATAGGAGTTAATGCAATCCCTGCTATTGAGGAAGTCAACATTTTCAAGGATGATGTAGTTATTCAATTTACTAACCCAAAGGTTCAGGCTTCTATTGCGGCAAACACATGGGTTGTTAGTGGTTCTCCTCAAACGAAAAAATTGCAGGATATTCTGCCCGGAATTATCAACCAATTGGGACCCGATAACTTAGACAACTTGAGGAAGTTGGCTGAGCAGTTCCAGAAGCAAGCACCTGGAGTAGGTGCTGGTGCAGCAGCAGCTGCCGCCAATGGTGAGGATGATGACGATGATGTTCCTGACCTTGTTGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGAAGCAAGCCTCCTAG

Protein sequence

EFLVYIFGFSTTRGEVKSQPLDQLDKYHHLRRALIYEALAPSHTEAIFYLFKPLRLKNLNITFKMDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPGVGAGAAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS
BLAST of CsGy1G007320 vs. NCBI nr
Match: XP_004137521.1 (PREDICTED: transcription factor BTF3 homolog 4-like [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 6.8e-59
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0

Query: 65  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 124
           MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 125 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 184
           KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 185 KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 228
           KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS
Sbjct: 121 KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 163

BLAST of CsGy1G007320 vs. NCBI nr
Match: KGN64202.1 (hypothetical protein Csa_1G043055 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 6.8e-59
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0

Query: 65  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 124
           MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 77  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 136

Query: 125 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 184
           KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 137 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 196

Query: 185 KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 228
           KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS
Sbjct: 197 KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 239

BLAST of CsGy1G007320 vs. NCBI nr
Match: XP_016900101.1 (PREDICTED: nascent polypeptide-associated complex subunit beta-like isoform X1 [Cucumis melo])

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0

Query: 63  FKMDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVN 122
           FKMDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVN
Sbjct: 2   FKMDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVN 61

Query: 123 IFKDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQ 182
           IFKDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQ
Sbjct: 62  IFKDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQ 121

Query: 183 FQK--XXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 228
           FQK  XXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS
Sbjct: 122 FQKXXXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 168

BLAST of CsGy1G007320 vs. NCBI nr
Match: XP_008467234.1 (PREDICTED: nascent polypeptide-associated complex subunit beta-like isoform X2 [Cucumis melo])

HSP 1 Score: 231.9 bits (590), Expect = 2.2e-57
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0

Query: 65  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 124
           MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 125 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 184
           KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 185 K--XXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 228
           K  XXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS
Sbjct: 121 KXXXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 165

BLAST of CsGy1G007320 vs. NCBI nr
Match: XP_022954733.1 (nascent polypeptide-associated complex subunit beta-like [Cucurbita moschata] >XP_022994949.1 nascent polypeptide-associated complex subunit beta-like [Cucurbita maxima] >XP_023542222.1 nascent polypeptide-associated complex subunit beta-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023542223.1 nascent polypeptide-associated complex subunit beta-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.2 bits (583), Expect = 1.4e-56
Identity = 160/163 (98.16%), Postives = 161/163 (98.77%), Query Frame = 0

Query: 65  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 124
           MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 125 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 184
           KDDVVIQFTNPKVQASIAANTWVVSG+PQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFTNPKVQASIAANTWVVSGTPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 185 KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 228
             XXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS
Sbjct: 121 --XXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 161

BLAST of CsGy1G007320 vs. TAIR10
Match: AT1G17880.1 (basic transcription factor 3)

HSP 1 Score: 192.6 bits (488), Expect = 2.7e-49
Identity = 112/160 (70.00%), Postives = 120/160 (75.00%), Query Frame = 0

Query: 65  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 124
           M+  KL KMA  VRTGGKG+VRR             KRLQSTLKRIGVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRKKKAVHKTNTTDDKRLQSTLKRIGVNSIPAIEEVNIF 60

Query: 125 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 184
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILP II+QLGPDN+DNL+KLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGSPQTKKLQDILPQIISQLGPDNMDNLKKLAEQFQ 120

Query: 185 KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEK 225
           K                 XXXX VP+LV G+TFE AAEEK
Sbjct: 121 K--QASGEGNAASATIQEXXXXDVPELV-GETFETAAEEK 157

BLAST of CsGy1G007320 vs. TAIR10
Match: AT1G73230.1 (Nascent polypeptide-associated complex NAC)

HSP 1 Score: 191.4 bits (485), Expect = 6.0e-49
Identity = 124/160 (77.50%), Postives = 133/160 (83.12%), Query Frame = 0

Query: 65  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 124
           M+  KL KMA  VRTGGKG+VRRXXXXXXXXXXXXXKRLQSTLKR+GVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRXXXXXXXXXXXXXKRLQSTLKRVGVNSIPAIEEVNIF 60

Query: 125 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 184
           KDDVVIQF NPKVQASIAANTWVVSG+PQTKKLQDILP II+QLGPDNLDNL+KLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGTPQTKKLQDILPQIISQLGPDNLDNLKKLAEQFQ 120

Query: 185 KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEK 225
           K                XXXXXXVPDLV G+TFE  A E+
Sbjct: 121 K--QAPGAGDVPATIQEXXXXXXVPDLVVGETFETPATEE 158

BLAST of CsGy1G007320 vs. Swiss-Prot
Match: sp|Q9SMW7|BTF3_ARATH (Basic transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=BTF3 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.8e-48
Identity = 112/160 (70.00%), Postives = 120/160 (75.00%), Query Frame = 0

Query: 65  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 124
           M+  KL KMA  VRTGGKG+VRR             KRLQSTLKRIGVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRKKKAVHKTNTTDDKRLQSTLKRIGVNSIPAIEEVNIF 60

Query: 125 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 184
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILP II+QLGPDN+DNL+KLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGSPQTKKLQDILPQIISQLGPDNMDNLKKLAEQFQ 120

Query: 185 KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEK 225
           K                 XXXX VP+LV G+TFE AAEEK
Sbjct: 121 K--QASGEGNAASATIQEXXXXDVPELV-GETFETAAEEK 157

BLAST of CsGy1G007320 vs. Swiss-Prot
Match: sp|Q9CAT7|BTF3L_ARATH (Nascent polypeptide-associated complex subunit beta OS=Arabidopsis thaliana OX=3702 GN=At1g73230 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-47
Identity = 124/160 (77.50%), Postives = 133/160 (83.12%), Query Frame = 0

Query: 65  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 124
           M+  KL KMA  VRTGGKG+VRRXXXXXXXXXXXXXKRLQSTLKR+GVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRXXXXXXXXXXXXXKRLQSTLKRVGVNSIPAIEEVNIF 60

Query: 125 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 184
           KDDVVIQF NPKVQASIAANTWVVSG+PQTKKLQDILP II+QLGPDNLDNL+KLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGTPQTKKLQDILPQIISQLGPDNLDNLKKLAEQFQ 120

Query: 185 KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEK 225
           K                XXXXXXVPDLV G+TFE  A E+
Sbjct: 121 K--QAPGAGDVPATIQEXXXXXXVPDLVVGETFETPATEE 158

BLAST of CsGy1G007320 vs. Swiss-Prot
Match: sp|Q6PC91|BT3L4_DANRE (Transcription factor BTF3 homolog 4 OS=Danio rerio OX=7955 GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-26
Identity = 63/122 (51.64%), Postives = 85/122 (69.67%), Query Frame = 0

Query: 65  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 124
           M+  KL K+   VR GGKG+ RR             K+LQS+LK++ VN I  IEEVN+ 
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLVVNNIAGIEEVNMI 60

Query: 125 KDD-VVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQF 184
           KDD  VI F NPKVQAS++ANT+ ++G  +TK+L ++LPGI++QLG D+L +LRKLAEQF
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAETKQLTEMLPGILSQLGADSLTSLRKLAEQF 120

Query: 185 QK 186
            +
Sbjct: 121 PR 122

BLAST of CsGy1G007320 vs. Swiss-Prot
Match: sp|A2R091|NACB_ASPNC (Nascent polypeptide-associated complex subunit beta OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=egd1 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-26
Identity = 69/159 (43.40%), Postives = 95/159 (59.75%), Query Frame = 0

Query: 65  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 124
           MD  KL +M  +VR GGKG+ RR             K+LQ+TLK++ V  I AIEEVN+F
Sbjct: 1   MDQAKLARMQQSVRIGGKGTPRRKVKKVHKSSGADDKKLQATLKKMNVQPIQAIEEVNMF 60

Query: 125 KDD-VVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQF 184
           K+D  VI F  PKV AS+ +NT+ + G+ + K+L +++PGI+NQLGPD+L +LRKLAE +
Sbjct: 61  KEDGNVIHFGAPKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESY 120

Query: 185 QKXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAE 223
           Q                       +PDLVEG+ FE+  E
Sbjct: 121 QN----MQKNQAGADGKKDDEEDDIPDLVEGENFESNVE 155

BLAST of CsGy1G007320 vs. Swiss-Prot
Match: sp|Q4KLF5|BT3L4_XENLA (Transcription factor BTF3 homolog 4 OS=Xenopus laevis OX=8355 GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.2e-26
Identity = 61/122 (50.00%), Postives = 84/122 (68.85%), Query Frame = 0

Query: 65  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 124
           M+  KL K+   VR GGKG+ RR             K+LQS+LK++ VN I  IEEVN+ 
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60

Query: 125 KDD-VVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQF 184
           KDD  VI F NPKVQAS++ANT+ ++G  + K++ ++LPGI++QLG D+L +LRKLAEQF
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAEVKQITEMLPGILSQLGADSLTSLRKLAEQF 120

Query: 185 QK 186
            +
Sbjct: 121 PR 122

BLAST of CsGy1G007320 vs. TrEMBL
Match: tr|A0A0A0LTU8|A0A0A0LTU8_CUCSA (Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus OX=3659 GN=Csa_1G043055 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.5e-59
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0

Query: 65  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 124
           MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 77  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 136

Query: 125 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 184
           KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 137 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 196

Query: 185 KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 228
           KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS
Sbjct: 197 KXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 239

BLAST of CsGy1G007320 vs. TrEMBL
Match: tr|A0A1S4DVT8|A0A1S4DVT8_CUCME (Nascent polypeptide-associated complex subunit beta OS=Cucumis melo OX=3656 GN=LOC103504634 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 7.7e-59
Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0

Query: 63  FKMDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVN 122
           FKMDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVN
Sbjct: 2   FKMDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVN 61

Query: 123 IFKDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQ 182
           IFKDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQ
Sbjct: 62  IFKDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQ 121

Query: 183 FQK--XXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 228
           FQK  XXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS
Sbjct: 122 FQKXXXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 168

BLAST of CsGy1G007320 vs. TrEMBL
Match: tr|A0A1S3CT31|A0A1S3CT31_CUCME (Nascent polypeptide-associated complex subunit beta OS=Cucumis melo OX=3656 GN=LOC103504634 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.5e-57
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0

Query: 65  MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 124
           MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 125 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 184
           KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 185 K--XXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 228
           K  XXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS
Sbjct: 121 KXXXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQAS 165

BLAST of CsGy1G007320 vs. TrEMBL
Match: tr|A0A103Y6K5|A0A103Y6K5_CYNCS (Nascent polypeptide-associated complex subunit beta OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_018253 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.0e-51
Identity = 132/175 (75.43%), Postives = 140/175 (80.00%), Query Frame = 0

Query: 51  FKPLRLKNLNITFKMDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRI 110
           F+ L +  L+I  KM+  KL KMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRI
Sbjct: 227 FQLLFIARLSIDAKMNVEKLMKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRI 286

Query: 111 GVNAIPAIEEVNIFKDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGP 170
           GVNAIPAIEEVNIFKD+ VIQF NPKVQASIAANTWVVSGSPQTKKLQDILPGI+NQLGP
Sbjct: 287 GVNAIPAIEEVNIFKDETVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPGILNQLGP 346

Query: 171 DNLDNLRKLAEQFQKXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQ 226
           DNLDNLRKLAEQFQK                      VP+LV G+TFEAAAEE Q
Sbjct: 347 DNLDNLRKLAEQFQK--QAPGAGEGTAATTAQEDDYEVPELVAGETFEAAAEEGQ 399

BLAST of CsGy1G007320 vs. TrEMBL
Match: tr|A0A059A4Q1|A0A059A4Q1_EUCGR (Nascent polypeptide-associated complex subunit beta OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K02308 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.9e-51
Identity = 141/233 (60.52%), Postives = 158/233 (67.81%), Query Frame = 0

Query: 3   LVYIFGFSTTRGEVKSQ-PLDQLDKYHHL----RRALIYEALAPSHTE-----AIFYLFK 62
           + + F F+ T   V S   + QL +   L    R A++    APS        ++   F 
Sbjct: 1   MTFHFHFNKTSALVNSTWAMPQLTRSKTLAGKRRAAILKSKRAPSEESCSLSLSLLIFFS 60

Query: 63  PLRLKNLNITFKMDHTKLQKMAGAVRTGGKGSVRRXXXXXXXXXXXXXKRLQSTLKRIGV 122
           P    +     KM+  +L KMAG+VRTGGKG++R XXXXXXXXXXXXXKRLQSTLKRIGV
Sbjct: 61  PKTPSDPKTLTKMNRERLMKMAGSVRTGGKGTMRXXXXXXXXXXXXXXKRLQSTLKRIGV 120

Query: 123 NAIPAIEEVNIFKDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDN 182
           NAIPAIEEVNIFKDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDN
Sbjct: 121 NAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDN 180

Query: 183 LDNLRKLAEQFQKXXXXXXXXXXXXXXXXXXXXXXVPDLVEGQTFEAAAEEKQ 226
           LDNLRKLAEQFQK                      VP+LV G+TFEAAAEE Q
Sbjct: 181 LDNLRKLAEQFQK-QVPGAATGSGATGMQDDDDDEVPELVPGETFEAAAEEGQ 232

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004137521.16.8e-59100.00PREDICTED: transcription factor BTF3 homolog 4-like [Cucumis sativus][more]
KGN64202.16.8e-59100.00hypothetical protein Csa_1G043055 [Cucumis sativus][more]
XP_016900101.11.2e-5898.80PREDICTED: nascent polypeptide-associated complex subunit beta-like isoform X1 [... [more]
XP_008467234.12.2e-5798.79PREDICTED: nascent polypeptide-associated complex subunit beta-like isoform X2 [... [more]
XP_022954733.11.4e-5698.16nascent polypeptide-associated complex subunit beta-like [Cucurbita moschata] >X... [more]
Match NameE-valueIdentityDescription
AT1G17880.12.7e-4970.00basic transcription factor 3[more]
AT1G73230.16.0e-4977.50Nascent polypeptide-associated complex NAC[more]
Match NameE-valueIdentityDescription
sp|Q9SMW7|BTF3_ARATH4.8e-4870.00Basic transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=BTF3 PE=1 SV=1[more]
sp|Q9CAT7|BTF3L_ARATH1.1e-4777.50Nascent polypeptide-associated complex subunit beta OS=Arabidopsis thaliana OX=3... [more]
sp|Q6PC91|BT3L4_DANRE1.8e-2651.64Transcription factor BTF3 homolog 4 OS=Danio rerio OX=7955 GN=btf3l4 PE=2 SV=1[more]
sp|A2R091|NACB_ASPNC1.8e-2643.40Nascent polypeptide-associated complex subunit beta OS=Aspergillus niger (strain... [more]
sp|Q4KLF5|BT3L4_XENLA5.2e-2650.00Transcription factor BTF3 homolog 4 OS=Xenopus laevis OX=8355 GN=btf3l4 PE=2 SV=... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LTU8|A0A0A0LTU8_CUCSA4.5e-59100.00Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus OX=3659 G... [more]
tr|A0A1S4DVT8|A0A1S4DVT8_CUCME7.7e-5998.80Nascent polypeptide-associated complex subunit beta OS=Cucumis melo OX=3656 GN=L... [more]
tr|A0A1S3CT31|A0A1S3CT31_CUCME1.5e-5798.79Nascent polypeptide-associated complex subunit beta OS=Cucumis melo OX=3656 GN=L... [more]
tr|A0A103Y6K5|A0A103Y6K5_CYNCS2.0e-5175.43Nascent polypeptide-associated complex subunit beta OS=Cynara cardunculus var. s... [more]
tr|A0A059A4Q1|A0A059A4Q1_EUCGR5.9e-5160.52Nascent polypeptide-associated complex subunit beta OS=Eucalyptus grandis OX=711... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR038187NAC_A/B_dom_sf
IPR002715Nas_poly-pep-assoc_cplx_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G007320.1CsGy1G007320.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002715Nascent polypeptide-associated complex NAC domainSMARTSM01407NAC_2coord: 100..155
e-value: 3.9E-22
score: 89.6
IPR002715Nascent polypeptide-associated complex NAC domainPFAMPF01849NACcoord: 100..155
e-value: 5.5E-20
score: 71.0
IPR002715Nascent polypeptide-associated complex NAC domainPROSITEPS51151NAC_ABcoord: 97..161
score: 16.097
IPR038187NAC A/B domain superfamilyGENE3DG3DSA:2.20.70.30coord: 112..168
e-value: 1.5E-27
score: 97.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..227
NoneNo IPR availablePANTHERPTHR10351:SF47SUBFAMILY NOT NAMEDcoord: 65..224
NoneNo IPR availablePANTHERPTHR10351TRANSCRIPTION FACTOR BTF3coord: 65..224