CsGy1G007320 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAATTTTTGGTATATATTTTTGGATTTTCCACTACTCGAGGTGAGGTTAAATCCCAACCGTTGGATCAGCTTGATAAATATCACCATCTTCGTCGCGCCCTAATATATGAAGCATTAGCGCCGTCTCATACTGAGGCTATCTTCTACCTCTTCAAACCACTGAGACTCAAAAACCTCAATATCACCTTCAAGGTAGAACTCTTCCTTCCATTTTCGCTTCACTTCTCATCGTTATCTCAATCCTCTCTTGTTCTTTCTATTTTCGGATTGCTCTTCTTCATCTTCGACGATGAATTTCTTCTGCCGAGGGTTCTACTGTTGTGTTTTTTCATTTTATAGCCGGATTTTGTTTTTGCTTCTTTTGAGGCGTTCGCGTTCATCGATTTGATATGTATTTATGTCTTTGAAACTTCTCGTCATTGATTTTCGTCTTTATATGTTAAACTTGTTTGTGTTATTGAATTTATTGATTACTTTACAGATCGTGTTTGTGTCTATACCATCTGTAAGCGTTCTTCGATTGTGAGTTTAGAAGTGAAGTAAAGAACAGCTTAGGTTAGAGGATTTAGTGTAGCCGTAGTTACTGTACTGAACAGGAGCTTACATTACATGAACATTACATTTCTTGTATTTTTCTCAGCGATTGTGATAAATGATGAACGGATAAATTTATACCTTGATAATGTTCAAGGTAGACCTCTTCCTTCCATTTTCGGATTGCTTTTCTTCATCTTCGACGATGAACATCATCTGCCGAGGGTTCTACTGTGGCGTATTTTCATTTTCTAACCGGATTTTGTTTTTACTTCTGTTGAGGTGTTTGTGTTCATCGATTTGATATGTATGTACGTGTTTGAAACTTCTCGTTATTCATTTCTTTGTGTAATTGGCTTTCTTGATTATTTTACAGAACGTGTTTTAATCTTCACTTCTCATCGTTATCTAAATCTTCTCTTGTTCTTACTCATTTCGGATTGCTCTTCTTCATCTTCGACGATGGACTTCTTATGCCGAGGTGTTTGTGTTATTGGATTTCTTGATTATTTTACAGAACGTGTTTAAATCTCTACTGTTCTTTAATTGCGTTTTTCGATTGTGAGTTTAGAAGTGAAGGAAAGAACAGCTTAGGTTATAGGATTTAGTGGAGCTGAAGTTACTGTACGGATGAGGAGCTTACATTTCATGAACATTATATTTTTTGTATTTTTCTCAAAGATTATGATAACACGATGAACAGATAATTTATACTATAGAAATTAACTTTTTGGATAAGCTAGGGCTTGATAACGTATTCTAGTGCTGTTTTCCTTTTAGATACTGCAACTATTACATGAATTTTCGGATGAGATTTCTGTTTGTTATAGTTTTTAAAAAACGTGACGAAGCACCTGTATGTGTTTATCTGTTTTAAATTTCTTTTCTTCGTTAGCGCTTTTATGTTCTTTAATTGCTGTAATATTTCAAGTTCGAATGTAGTTTTTAATCATTTTTCAAGTTCTCAATTCTCATAAATTTTATCCTTTTTGTTTCATATTAAAAGAAACAATCTCATAAATCTTATCCTTGTTCTTCCTATGTTGTGCAGATGGATCATACGAAGCTCCAGAAAATGGCTGGTGCAGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGTTGGTTGCCTTTTTATCTTTTGAAAGTTCCGAAAAGTGTAAGAAGATTTAATCATTTGTCGCTTGATTTATTTAATAAGGAATCATAAATTATTTCAACCGTAAGATGGAACTCTTATAAAATTTACCTGGATGTTTATCATTCTAGTTTTTTTTTGGTAAATAATTTATTTGAACCATGCTGATATCCATTCTCCCATCCATTTCTGCTTTTCTCAATTCTCTCATTCATCGTTCTATTAATTTCAGCCATGCATTTTTATACTAACTAAGAATTTCAATAGCTCGTAGTTATTCTTAAAATTTCTGATATGCAGATAATGTTTTACGACAACATATATAATTTTTCTTTTTCCAATTTTTGTCAATTTAAATGGTACTTTTTAATTGACTAATGAGTGAATATACTAACATAAATTCCATGCTTGTTTGAGTGTTGGATCTTTCAGTTTGGCATATGTTCTTGATATTTCTCGTGCTTACTGTAATGGAGGCGCTGTTGAAATATCATTTTCATCTTCTTTTCTTTAAGATCAATCGTTTGCTTTCTTAATTTTTAGTTTTCTTTCTTATTTTGTCAATTAAAGGAAGAAGAAGGCTGTCCACAAGACAACTACCACAGACGATAAACGGCTTCAAAGTACCTTGAAGAGAATAGGAGTTAATGCAATCCCTGCTATTGAGGAAGTCAACATTTTCAAGGATGATGTAGTTATTCAATTTACTAACCCAAAGGGTAAATTTATGCAACTATATATATACGCATGGTTGTTTACCATCAATATCTTGATATGAAATTCATTTAGTTGTTTCTTGTTATCTATTTCAGTTCAGGCTTCTATTGCGGCAAACACATGGGTTGTTAGTGGTTCTCCTCAAACGAAAAGTATGTCTTCTTACTCTCACCACATTTGCATATAATAAACATTTAACTGATCTCATGTTCTAAATTCTAGGGCATTCTTGTAGTAGATATATCGAAAAAACTGAAACAATTTTTTCTTGCAAATTTTGGTCATACGTTTTAAAAAGAACAAATAGTCCCTAAATGAAAATGACACTACAGAGATGTCAACAGACTTGGCTGTTAGTAATATAACTTCTCCTATTTAATTGTATAATCAATATTGCTACCCTATTATTTCAATCATTCTTTGATATCTCAAACCATTTTTAATACAGTGATGAATATTAATTATCGAAAGTTTTCCTAAAGTGCTGTCATTTGATGAAAAAACCACCGCTTACTTTTGTAAGACCAAATTTTGTTATTTGATGAGAAAAAAAAGCTTTATTTGAACGGTTACATGTTTGTAGCTGTATTGACAATGCTGTTGATTGTACACGAACCTTCAAGTATGTTTAGGAATTTAATATGATTAGTACACTGTATCGTTTGAATTAAATATGAAGCTATTCTAATGAAGCATGTTACAAAATAGCCTTGAAACTTTTTCAGATAGTTCTTTTTAGAAAATTTAAATTAGTCTTGAATCTCTTATCCTTTTTTCTTCTTCTTTTAATGTGCTTTTGGAATGCGGTAAAGTTCTTCGGGATTAGGATAATATTGTAAATGATCTAATGCAAAATAACATGCTGCCTGCTGATGACTGCCGTTGGCTTGGAATTTGAAACAAGGCTAATATGGTTTCCTTCAACTATGTGTAAAACAAAGGGTTTACTTCAATTGTGACATTTGATGTGACAGTATTTTTTTTAACATGTTTGAAGGAGTACACTTTGTTAATTTATTGAATGAATGCGTTCTTACCAAAAGTTATTTCAAAAAGTCATGCTAGAGAATGACACTTCCTAGTTGCCTCTCTTAGGGTGGCATCTTCATGCTAGAAAATGACACTCCGCATACATTTTTTTTCTTCCCTCAATTAAAAAGATGTTTTCATATAAGGAAAACAAACATGGCATTGGGTGTTTTAGTTTTGACTTGTTTGTTTCTCATGGTGAAGCTTTTCTATTAACTCTGGCCAAGATTTTCATTGCGCTATTTGCCTATCTTTTGTTATTATGTATCACGACCAGCTCTAATATTTTAATTTCTTCTCTCAGAATTGCAGGATATTCTGCCCGGAATTATCAACCAATTGGGTAAGTACACGTGATTGCATTTTTGTGTTCCATCCTGAGTCCTACCTAAAATAACAAGACTTGTTTACGTGTTTAAATTTTAGGACCCGATAACTTAGACAACTTGAGGAAGTTGGCTGAGCAGTTCCAGAAGCAAGCACCTGGAGTAGGTGCTGGTGCAGCAGCAGCTGCCGCCAATGGTGAGGATGATGACGATGATGTTCCTGACCTTGTTGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGAAGCAAGCCTCCTAGATAGAGGAGTTCGTTCCCAGATGATTTTGTTTAGCTTTTCTTTATTTTTTCTCTTTACATAATTTTAAAATGCTTGGGAAGAGTTCCATTTTTCTCCGTGTATTTGCTTTTTGCTAATCTTTGTTCCCCCTACCCCATCTTGCTCACATGTAACTTCCCCGATGAATGGATTTTCGATTGCCTGCCCCCTCCCCCTTCAACTGCCTTAATTCCTCTGAGTAATGTTTTTCATATTTTTAAGGTGCGGAATTTATAGGAAAAATATGGGGATTAAAGTTTAAGGTCAGCTTTGTATTTGAATATGTTAAGGTATGCTTATTAAGTAATCATTTCCCCCTCTTCTCACCTCTTCGTGCTGTTAAATTTTACAACGGATATTAGTATCTTTATTTATTAGATTTCTGATAAGTTCCATTGGTCAAAAAATTAAAATGTTGTGTGATTGAATTAGCTATATCTGGGTGATTTTTCTGAATCTTTATGATTTTTGTTAGTTAACGTACCTAACTCTCTCACCTCACATTCGGAGTAGATCGAATAATGCCAAAATATTGATTAGAATAATTTGTAATGTACTTCTAAGAGAAATGAGAGGAGAGAATAGATGCG GAATTTTTGGTATATATTTTTGGATTTTCCACTACTCGAGGTGAGGTTAAATCCCAACCGTTGGATCAGCTTGATAAATATCACCATCTTCGTCGCGCCCTAATATATGAAGCATTAGCGCCGTCTCATACTGAGGCTATCTTCTACCTCTTCAAACCACTGAGACTCAAAAACCTCAATATCACCTTCAAGATGGATCATACGAAGCTCCAGAAAATGGCTGGTGCAGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGAAGAAGAAGGCTGTCCACAAGACAACTACCACAGACGATAAACGGCTTCAAAGTACCTTGAAGAGAATAGGAGTTAATGCAATCCCTGCTATTGAGGAAGTCAACATTTTCAAGGATGATGTAGTTATTCAATTTACTAACCCAAAGGTTCAGGCTTCTATTGCGGCAAACACATGGGTTGTTAGTGGTTCTCCTCAAACGAAAAAATTGCAGGATATTCTGCCCGGAATTATCAACCAATTGGGACCCGATAACTTAGACAACTTGAGGAAGTTGGCTGAGCAGTTCCAGAAGCAAGCACCTGGAGTAGGTGCTGGTGCAGCAGCAGCTGCCGCCAATGGTGAGGATGATGACGATGATGTTCCTGACCTTGTTGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGAAGCAAGCCTCCTAGATAGAGGAGTTCGTTCCCAGATGATTTTGTTTAGCTTTTCTTTATTTTTTCTCTTTACATAATTTTAAAATGCTTGGGAAGAGTTCCATTTTTCTCCGTGTATTTGCTTTTTGCTAATCTTTGTTCCCCCTACCCCATCTTGCTCACATGTAACTTCCCCGATGAATGGATTTTCGATTGCCTGCCCCCTCCCCCTTCAACTGCCTTAATTCCTCTGAGTAATGTTTTTCATATTTTTAAGGTGCGGAATTTATAGGAAAAATATGGGGATTAAAGTTTAAGGTCAGCTTTGTATTTGAATATGTTAAGGTATGCTTATTAAGTAATCATTTCCCCCTCTTCTCACCTCTTCGTGCTGTTAAATTTTACAACGGATATTAGTATCTTTATTTATTAGATTTCTGATAAGTTCCATTGGTCAAAAAATTAAAATGTTGTGTGATTGAATTAGCTATATCTGGGTGATTTTTCTGAATCTTTATGATTTTTGTTAGTTAACGTACCTAACTCTCTCACCTCACATTCGGAGTAGATCGAATAATGCCAAAATATTGATTAGAATAATTTGTAATGTACTTCTAAGAGAAATGAGAGGAGAGAATAGATGCG GAATTTTTGGTATATATTTTTGGATTTTCCACTACTCGAGGTGAGGTTAAATCCCAACCGTTGGATCAGCTTGATAAATATCACCATCTTCGTCGCGCCCTAATATATGAAGCATTAGCGCCGTCTCATACTGAGGCTATCTTCTACCTCTTCAAACCACTGAGACTCAAAAACCTCAATATCACCTTCAAGATGGATCATACGAAGCTCCAGAAAATGGCTGGTGCAGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGAAGAAGAAGGCTGTCCACAAGACAACTACCACAGACGATAAACGGCTTCAAAGTACCTTGAAGAGAATAGGAGTTAATGCAATCCCTGCTATTGAGGAAGTCAACATTTTCAAGGATGATGTAGTTATTCAATTTACTAACCCAAAGGTTCAGGCTTCTATTGCGGCAAACACATGGGTTGTTAGTGGTTCTCCTCAAACGAAAAAATTGCAGGATATTCTGCCCGGAATTATCAACCAATTGGGACCCGATAACTTAGACAACTTGAGGAAGTTGGCTGAGCAGTTCCAGAAGCAAGCACCTGGAGTAGGTGCTGGTGCAGCAGCAGCTGCCGCCAATGGTGAGGATGATGACGATGATGTTCCTGACCTTGTTGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGAAGCAAGCCTCCTAG EFLVYIFGFSTTRGEVKSQPLDQLDKYHHLRRALIYEALAPSHTEAIFYLFKPLRLKNLNITFKMDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPGVGAGAAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS
BLAST of CsGy1G007320 vs. NCBI nr
Match: XP_004137521.1 (PREDICTED: transcription factor BTF3 homolog 4-like [Cucumis sativus]) HSP 1 Score: 236.9 bits (603), Expect = 6.8e-59 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsGy1G007320 vs. NCBI nr
Match: KGN64202.1 (hypothetical protein Csa_1G043055 [Cucumis sativus]) HSP 1 Score: 236.9 bits (603), Expect = 6.8e-59 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsGy1G007320 vs. NCBI nr
Match: XP_016900101.1 (PREDICTED: nascent polypeptide-associated complex subunit beta-like isoform X1 [Cucumis melo]) HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58 Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0
BLAST of CsGy1G007320 vs. NCBI nr
Match: XP_008467234.1 (PREDICTED: nascent polypeptide-associated complex subunit beta-like isoform X2 [Cucumis melo]) HSP 1 Score: 231.9 bits (590), Expect = 2.2e-57 Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0
BLAST of CsGy1G007320 vs. NCBI nr
Match: XP_022954733.1 (nascent polypeptide-associated complex subunit beta-like [Cucurbita moschata] >XP_022994949.1 nascent polypeptide-associated complex subunit beta-like [Cucurbita maxima] >XP_023542222.1 nascent polypeptide-associated complex subunit beta-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023542223.1 nascent polypeptide-associated complex subunit beta-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 229.2 bits (583), Expect = 1.4e-56 Identity = 160/163 (98.16%), Postives = 161/163 (98.77%), Query Frame = 0
BLAST of CsGy1G007320 vs. TAIR10
Match: AT1G17880.1 (basic transcription factor 3) HSP 1 Score: 192.6 bits (488), Expect = 2.7e-49 Identity = 112/160 (70.00%), Postives = 120/160 (75.00%), Query Frame = 0
BLAST of CsGy1G007320 vs. TAIR10
Match: AT1G73230.1 (Nascent polypeptide-associated complex NAC) HSP 1 Score: 191.4 bits (485), Expect = 6.0e-49 Identity = 124/160 (77.50%), Postives = 133/160 (83.12%), Query Frame = 0
BLAST of CsGy1G007320 vs. Swiss-Prot
Match: sp|Q9SMW7|BTF3_ARATH (Basic transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=BTF3 PE=1 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 4.8e-48 Identity = 112/160 (70.00%), Postives = 120/160 (75.00%), Query Frame = 0
BLAST of CsGy1G007320 vs. Swiss-Prot
Match: sp|Q9CAT7|BTF3L_ARATH (Nascent polypeptide-associated complex subunit beta OS=Arabidopsis thaliana OX=3702 GN=At1g73230 PE=2 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.1e-47 Identity = 124/160 (77.50%), Postives = 133/160 (83.12%), Query Frame = 0
BLAST of CsGy1G007320 vs. Swiss-Prot
Match: sp|Q6PC91|BT3L4_DANRE (Transcription factor BTF3 homolog 4 OS=Danio rerio OX=7955 GN=btf3l4 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.8e-26 Identity = 63/122 (51.64%), Postives = 85/122 (69.67%), Query Frame = 0
BLAST of CsGy1G007320 vs. Swiss-Prot
Match: sp|A2R091|NACB_ASPNC (Nascent polypeptide-associated complex subunit beta OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=egd1 PE=3 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.8e-26 Identity = 69/159 (43.40%), Postives = 95/159 (59.75%), Query Frame = 0
BLAST of CsGy1G007320 vs. Swiss-Prot
Match: sp|Q4KLF5|BT3L4_XENLA (Transcription factor BTF3 homolog 4 OS=Xenopus laevis OX=8355 GN=btf3l4 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 5.2e-26 Identity = 61/122 (50.00%), Postives = 84/122 (68.85%), Query Frame = 0
BLAST of CsGy1G007320 vs. TrEMBL
Match: tr|A0A0A0LTU8|A0A0A0LTU8_CUCSA (Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus OX=3659 GN=Csa_1G043055 PE=3 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 4.5e-59 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsGy1G007320 vs. TrEMBL
Match: tr|A0A1S4DVT8|A0A1S4DVT8_CUCME (Nascent polypeptide-associated complex subunit beta OS=Cucumis melo OX=3656 GN=LOC103504634 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 7.7e-59 Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0
BLAST of CsGy1G007320 vs. TrEMBL
Match: tr|A0A1S3CT31|A0A1S3CT31_CUCME (Nascent polypeptide-associated complex subunit beta OS=Cucumis melo OX=3656 GN=LOC103504634 PE=3 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.5e-57 Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0
BLAST of CsGy1G007320 vs. TrEMBL
Match: tr|A0A103Y6K5|A0A103Y6K5_CYNCS (Nascent polypeptide-associated complex subunit beta OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_018253 PE=3 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.0e-51 Identity = 132/175 (75.43%), Postives = 140/175 (80.00%), Query Frame = 0
BLAST of CsGy1G007320 vs. TrEMBL
Match: tr|A0A059A4Q1|A0A059A4Q1_EUCGR (Nascent polypeptide-associated complex subunit beta OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K02308 PE=3 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 5.9e-51 Identity = 141/233 (60.52%), Postives = 158/233 (67.81%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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