MELO3C002159 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C002159
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Nascent polypeptide-associated complex subunit beta
Location	chr12 : 24747457 .. 24751744 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCTTCAAGGTAGAACTCTTCCTTCCATTTTCCCTTCACTTCTCATCGTTATCTCAATCCTCTCTTGTTCTTTCTATTTTTTGATTGCTCTTCTTCATCTTCGACGATGAATTTCTTCTGCTGAGGGTTCTACTGTGGTGTATTTTTATTTTATTAGCCGGATTTTGTTTTTGCTTCTTTTGAGGTGTTCGCGTTCATCGATTTGATATGTATTTTTGTCTTTGAAACTTCTCGTCATTGATTTTCGTCTTTATATGTTAAACTTGTTTGTGTTATTGAATTTCTTGATTACTTTACAGATCGTGTTTATATCTATACTATCTGTAATTGCGTTCTTCGATTGTGAGTTTAGAAGTGAAGTAAAGAACAGCTTAGGTTAGAGGATTTAGTGTAGCCGTAGTTACTGTACCGAGCAGGAGCTTACATTACATGTACATTACATTTCTTGTATTTTCTCAGCGATTGTGATAACATGATGAACGGATAAATTTATACCTTGATAATGTTCAAGGTAGACCTCTTCCTTCCATTTTCGCTTCACTTCTCATCGTTATCTCATTCTTCTCTTGTTCTTGCTATTCTTCATCTTCGACGATGAACTTCTTCTGCCGAGGGTTCTACTGTGGCGTATATTCATTTTCTCAACGGATTCTGTTTTTACTTCTGTTGAGGTGTTCGTGTTCATCGTTATTCATTTTCTCGTTATTCATTTTCATTTTTATAGGCTAAACTTGTTTTTGTTATTGGATTTCTTGATTATTTTACAGAACGTGTTTAAATCTCTACTGGTTTTTAATTGCGTTTTTCGATTGTGAGTTCAGAAGTGAAGGAAAGAACAGCTTAGGCTATAGGATTTTGTGGAGCCGAAGTTCCTGTACAGAGGAGGAGCTTACATTTCTTGAACATTACATTTCTTGTATTTTTCTTGAAGATTATGATAACATGATGAACGGATAATTTTATACTATTGAAATTAATTTTTTGGATAAGCTAAGGCTTGATAACGTACTTTAGTGCTGTTTTCCTTTCAGATACTGCAACTGTTAAATGAATTTTCGGATGAGATTTCTGTTTCATTTATAGTTTTTAGAAAATGTGACGACGCACGTGTATGTATTCATCTGTTTTACATTTCTTTTCTTCGTTGGCGCTTCTATTTTTTTAATTGCTGTAATATTTAGAGTTTGAGTGGAGTTTTTAATCACTTTTCAAGTTTTCAATTCTCATAAATCTTATCCTTCTTGTTTCATATTAAAAGAAACAATCTCATAAATATTATTCGTGTTCTTCCTATGTTGTGCAGATGGATCATACAAAGCTCCAGAAAATGGCTGGTGCGGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGTTGGTTGCCTTTTTATCTTTTGAAAGTTTTTTAGAGTGTAAGAAGATTTAGTCATCTGTCGTTTGATTTATTTAACAAGAAATCATAAATTATCTCAACCGTAAGATCGAACTCTGGATGTTTCTCATGGTAGGTTTTTTTGGTAAATAATTTATTTGAACCATACTGATATCCTTTCTCCCATCCAGTTCTGCTTTTCTCAATTCTCTCATTCATTGTTCTATTAATTTCGGCCATTCATTTTTATACTCGTTAGAAATTTCAATAGTTCGTAGTTAATCTTTAAAATTTCTGATGTGCAGATAATGTTTTACGACAGCATAAATAATTTTCCTTTTTCCAATTTTTGTCAATTTAAATTGTAGTGTTTAGTTGACTAATGAATGAATATACTAACATAAATTTCATGCTTGTTTGAGTGTTGGATCTTTCAGTTTGGCATATGTTCTTGATATTTTTCATTCTTACTGTAATGGAGGTGCTGTTGGAATATCATTTTTTAATTTTCTTTCTTCTTTTGTTTCTTAAAGATCAATATTTTGCTTTCTCAGTTTTTAGTTTTCTTTCTTTTGTCAATTAAAGGAAGAAGAAGGCTGTTCACAAGACAACTACCACAGACGATAAACGGCTTCAAAGTACCTTGAAAAGAATAGGAGTTAATGCAATTCCTGCTATTGAGGAAGTCAACATTTTCAAGGATGATGTAGTTATTCAATTTACTAACCCGAAGGGTAATTTACGCAACTATATATGTACCCCATGGTTGTTTACCATCAACATCTTGATATGAAGTTAATTTAGTTGTTTTTTGTTATCTATTTCAGTTCAGGCTTCCATTGCGGCAAACACATGGGTTGTTAGTGGTTCTCCTCAAACGAAAAGTATGTCTTCTCACTCTCACCACATTTGAATATACTATAACATTTAACTGATCTCATATTGTAAATTCTAGGGCATTCTTGAAGTAGATATCTAAAAACTGAAACTATTTTTTCTTGCAAATTTTGGCCAACCATTTTAAAACGAACATATGAAAATGACAACGTAGAGTTGTCTACAGACTTGGCTGTTAATAAGATAAATAATCAATATTGCCTACCTATTATTTCAATCATTATTTTGTATCTTAAACCATTTTTAATTCAGCGATGAATATTAATCATCGATTATTTTCCTACGGTGCTGTTTGTAAATGCTTTGAAAAAACTACCGCTCAATTATGTAAGATAAAATTTTGTTATTTGATGAGAAAAAAAAATGCTTATTTGGCACGGTTGCATGTTTGAAGCTGTTTTGAAAATGCTGTTGATTGTATACGAACTTTCAAGTATGTATAGGAATTTAATATGAACACTACACGCTATTCTAGTACTGTATCGTTTGAATTAAATATGAAACTCTTCTATTGAAGCATGTTACAAAGCCTTGAAACTTTTTTAGATAGTTCTTAGTAGAAAATTTAATATAGTCTTGAATCTCTTTTCCTTTTTTAATGTGCATTTGGAATGCGGTAAAGTTGCACAAGGGTTGTTGGGGATTAAGATAAATATTGTAAAAGATGTAATGCAAAATAACATGCTGCTGACTGCCGTTGGCTTGGAATTTGAAACTCGGCCTAATATGGGTCCCTTCAACTATGTTTAAAATAAAGGGTTTGCATTGTATAACCGTTTCACTTAGTAGAGATATTTGGCCATCATTTTAATGGGGGAAATAGTTCAGATTGATACCAAAAAGTTTAGGATAATAGTTTCGTCTTTGCTAAATTATACTATTCTTGATATGTACTTCAATTGTGACATTTGATGTGACCATATTTTTCTTAGCATGTTTGAATGAGTGCACTCGTTAATTTATTGAATGGACGCATTCTTAACTTCTTACCAAAAGCTATTTCGAAAAGTCTGTAATACCTTTGATTCATCTCCTAGGGTGGCATTTTATCATGCTAGAAAATGATACTTCTGCTTACATCTTTTTTCCTCTCAATTAAAGTTGTTTTCATATAAGGAAAAAAAAAAAACATGGCATTGGGTGGTTTAGTTTGACTTGTTTATTTCTCATGGTGAAGCTTTTCTATTAACTCTGGCCAAGATACTCATCGTCATATTTGCCTGTCTTTCGTTATTATCCATCACGATCGAAATGCCATCTCTAATATTTAATTTTTTCTCTCAGAATTGCAAGATATCCTGCCCGGAATTATCAACCAATTGGGTAAGTACACGTGATTGCATTTTTGTGTTCCATCTCGAGTTGCAATTTAAATAACAAGACTTGTTTACGTGTTTAAATTTTAGGACCCGATAACTTGGACAACTTGAGGAAGTTGGCCGAGCAGTTCCAGAAGCAAGCACCTGGAGCAGGTGCCGGTGCTGCAGCAGCAGCAGCAGCTGCCAATGGTGAGGATGATGATGATGATGTTCCCGACCTTGTCGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGAAGCAAGCCTCTTAGATAGAGGAGCTCCCAGATGATTTTGTTTAGCTTTTCTTGTTTTTTTTAACTTCTTTACATAATTTAAAAATGTTTGGGAAGAGTTCCATTTTTCTCCGTGTATTTGTTTTTGCTAATCTTTGTTCCCCCCTCCACCTTGCTCACATGTAACTTCCCCGATGAATGGATTTTCGATTGCCTGCCCGGCCCCCTCCCCCTTCAACTGCCAGCCTTAATTCCTCTGAGTAATGTTTTCCATATTTAATGTGCGGAATTTATAGGAAAAATATGGGGATTAAAGTTTTAAGGTCAACTTTTGTATTCGAATATGTTAAGGTATGCTTATTAAGTAGTCATTTCCCCCTCTTCGCT

mRNA sequence

ACCTTCAAGGTAGAACTCTTCCTTCCATTTTCCCTTCACTTCTCATCGTTATCTCAATCCTCTCTTGTTCTTTCTATTTTTTGATTGCTCTTCTTCATCTTCGACGATGAATTTCTTCTGCTGAGGGTTCTACTGTGGTGTATTTTTATTTTATTAGCCGGATTTTGTTTTTGCTTCTTTTGAGATGGATCATACAAAGCTCCAGAAAATGGCTGGTGCGGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGAAGAAGAAGGCTGTTCACAAGACAACTACCACAGACGATAAACGGCTTCAAAGTACCTTGAAAAGAATAGGAGTTAATGCAATTCCTGCTATTGAGGAAGTCAACATTTTCAAGGATGATGTAGTTATTCAATTTACTAACCCGAAGGTTCAGGCTTCCATTGCGGCAAACACATGGGTTGTTAGTGGTTCTCCTCAAACGAAAAAATTGCAAGATATCCTGCCCGGAATTATCAACCAATTGGGACCCGATAACTTGGACAACTTGAGGAAGTTGGCCGAGCAGTTCCAGAAGCAAGCACCTGGAGCAGGTGCCGGTGCTGCAGCAGCAGCAGCAGCTGCCAATGGTGAGGATGATGATGATGATGTTCCCGACCTTGTCGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGAAGCAAGCCTCTTAGATAGAGGAGCTCCCAGATGATTTTGTTTAGCTTTTCTTGTTTTTTTTAACTTCTTTACATAATTTAAAAATGTTTGGGAAGAGTTCCATTTTTCTCCGTGTATTTGTTTTTGCTAATCTTTGTTCCCCCCTCCACCTTGCTCACATGTAACTTCCCCGATGAATGGATTTTCGATTGCCTGCCCGGCCCCCTCCCCCTTCAACTGCCAGCCTTAATTCCTCTGAGTAATGTTTTCCATATTTAATGTGCGGAATTTATAGGAAAAATATGGGGATTAAAGTTTTAAGGTCAACTTTTGTATTCGAATATGTTAAGGTATGCTTATTAAGTAGTCATTTCCCCCTCTTCGCT

Coding sequence (CDS)

ATGGATCATACAAAGCTCCAGAAAATGGCTGGTGCGGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGAAGAAGAAGGCTGTTCACAAGACAACTACCACAGACGATAAACGGCTTCAAAGTACCTTGAAAAGAATAGGAGTTAATGCAATTCCTGCTATTGAGGAAGTCAACATTTTCAAGGATGATGTAGTTATTCAATTTACTAACCCGAAGGTTCAGGCTTCCATTGCGGCAAACACATGGGTTGTTAGTGGTTCTCCTCAAACGAAAAAATTGCAAGATATCCTGCCCGGAATTATCAACCAATTGGGACCCGATAACTTGGACAACTTGAGGAAGTTGGCCGAGCAGTTCCAGAAGCAAGCACCTGGAGCAGGTGCCGGTGCTGCAGCAGCAGCAGCAGCTGCCAATGGTGAGGATGATGATGATGATGTTCCCGACCTTGTCGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGAAGCAAGCCTCTTAG

Homology

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BLAST of MELO3C002159 vs. Swiss-Prot
Match: BTF3L_ARATH (Nascent polypeptide-associated complex subunit beta OS=Arabidopsis thaliana GN=At1g73230 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 5.7e-67
Identity = 131/162 (80.86%), Postives = 139/162 (85.80%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL KMA  VRTGGKG+VRRKKKAVHKTTTTDDKRLQSTLKR+GVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRVGVNSIPAIEEVNIF 60

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF NPKVQASIAANTWVVSG+PQTKKLQDILP II+QLGPDNLDNL+KLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGTPQTKKLQDILPQIISQLGPDNLDNLKKLAEQFQ 120

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEK 163
           KQAPGAG       A    EDDDDDVPDLV G+TFE  A E+
Sbjct: 121 KQAPGAG----DVPATIQEEDDDDDVPDLVVGETFETPATEE 158

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BLAST of MELO3C002159 vs. Swiss-Prot
Match: BTF3_ARATH (Basic transcription factor 3 OS=Arabidopsis thaliana GN=BTF3 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.1e-65
Identity = 132/162 (81.48%), Postives = 141/162 (87.04%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL KMA  VRTGGKG+VRRKKKAVHKT TTDDKRLQSTLKRIGVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRKKKAVHKTNTTDDKRLQSTLKRIGVNSIPAIEEVNIF 60

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILP II+QLGPDN+DNL+KLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGSPQTKKLQDILPQIISQLGPDNMDNLKKLAEQFQ 120

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEK 163
           KQA G G     AA+A   E+DDDDVP+LV G+TFE AAEEK
Sbjct: 121 KQASGEG----NAASATIQEEDDDDVPELV-GETFETAAEEK 157

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BLAST of MELO3C002159 vs. Swiss-Prot
Match: BTF3_HUMAN (Transcription factor BTF3 OS=Homo sapiens GN=BTF3 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.6e-39
Identity = 86/163 (52.76%), Postives = 112/163 (68.71%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL K+   VR GGKG+ RRKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F
Sbjct: 50  MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 109

Query: 61  KDD-VVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQF 120
            +   VI F NPKVQAS+AANT+ ++G  +TK+L ++LP I+NQLG D+L +LR+LAE  
Sbjct: 110 TNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEAL 169

Query: 121 QKQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEK 163
            KQ+          A  A GEDDDD+VPDLVE   F+ A++ +
Sbjct: 170 PKQS------VDGKAPLATGEDDDDEVPDLVE--NFDEASKNE 204

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BLAST of MELO3C002159 vs. Swiss-Prot
Match: BTF3_MOUSE (Transcription factor BTF3 OS=Mus musculus GN=Btf3 PE=1 SV=3)

HSP 1 Score: 161.8 bits (408), Expect = 6.6e-39
Identity = 86/163 (52.76%), Postives = 112/163 (68.71%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL K+   VR GGKG+ RRKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F
Sbjct: 48  MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 107

Query: 61  KDD-VVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQF 120
            +   VI F NPKVQAS+AANT+ ++G  +TK+L ++LP I+NQLG D+L +LR+LAE  
Sbjct: 108 TNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEAL 167

Query: 121 QKQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEK 163
            KQ+          A  A GEDDDD+VPDLVE   F+ A++ +
Sbjct: 168 PKQS------VDGKAPLATGEDDDDEVPDLVE--NFDEASKNE 202

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BLAST of MELO3C002159 vs. Swiss-Prot
Match: BT3L4_DANRE (Transcription factor BTF3 homolog 4 OS=Danio rerio GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-38
Identity = 86/163 (52.76%), Postives = 115/163 (70.55%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ 
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLVVNNIAGIEEVNMI 60

Query: 61  KDD-VVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQF 120
           KDD  VI F NPKVQAS++ANT+ ++G  +TK+L ++LPGI++QLG D+L +LRKLAEQF
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAETKQLTEMLPGILSQLGADSLTSLRKLAEQF 120

Query: 121 QKQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEK 163
            +Q          A  A + +++DDDVPDLVE   F+ A++ +
Sbjct: 121 PRQVLD-----NKAPKAEDIDEEDDDVPDLVE--NFDEASKNE 156

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BLAST of MELO3C002159 vs. TrEMBL
Match: A0A0A0LTU8_CUCSA (Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus GN=Csa_1G043055 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 8.8e-83
Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 77  MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 136

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 137 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 196

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS 166
           KQAPG GAG  AAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS
Sbjct: 197 KQAPGVGAG--AAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS 239

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BLAST of MELO3C002159 vs. TrEMBL
Match: A0A0U4IR75_ZIZJJ (Nascent polypeptide-associated complex subunit beta OS=Ziziphus jujuba GN=BTF3 PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.7e-73
Identity = 147/165 (89.09%), Postives = 152/165 (92.12%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL KMAGAVRTGGKGS+RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MNREKLMKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILP I+NQLGPDNLDNL+KLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGSPQTKKLQDILPSILNQLGPDNLDNLKKLAEQFQ 120

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS 166
           KQAPGAGAG  AAAA A  EDDDDDVPDLV GQTFEAAAEE  A+
Sbjct: 121 KQAPGAGAGDGAAAATA-PEDDDDDVPDLVAGQTFEAAAEEGHAA 164

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BLAST of MELO3C002159 vs. TrEMBL
Match: D7TXR6_VITVI (Nascent polypeptide-associated complex subunit beta OS=Vitis vinifera GN=VIT_17s0053g00620 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.8e-73
Identity = 146/161 (90.68%), Postives = 150/161 (93.17%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL KMAGAVRTGGKGS+RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MNREKLMKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEE 162
           KQAPGAGAGAAAA      +DDDD+VPDLV GQTFEAAAEE
Sbjct: 121 KQAPGAGAGAAAAQ-----DDDDDEVPDLVAGQTFEAAAEE 156

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BLAST of MELO3C002159 vs. TrEMBL
Match: A0A0B0MH75_GOSAR (Nascent polypeptide-associated complex subunit beta OS=Gossypium arboreum GN=F383_22910 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.2e-71
Identity = 142/165 (86.06%), Postives = 150/165 (90.91%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  +L KMAGAVRTGGKGS+RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MNKERLMKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS 166
           KQAPGAG G    A A   E+DD++VPDLV G+TFEAAAEE QA+
Sbjct: 121 KQAPGAGEGTGTGAVATQ-EEDDEEVPDLVPGETFEAAAEEVQAA 164

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BLAST of MELO3C002159 vs. TrEMBL
Match: A0A165WBJ6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_015291 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 7.7e-71
Identity = 142/164 (86.59%), Postives = 148/164 (90.24%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL KMAGAVRTGGKGSVRRKKKA+HKT TTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MNREKLMKMAGAVRTGGKGSVRRKKKAIHKTATTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF +PKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFVSPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQA 165
           KQAPGAGA A AAA      DDDD+VP+LV G+TFEAAAEE  A
Sbjct: 121 KQAPGAGADAGAAAVQG---DDDDEVPELVPGETFEAAAEETPA 161

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BLAST of MELO3C002159 vs. TAIR10
Match: AT1G73230.1 (AT1G73230.1 Nascent polypeptide-associated complex NAC)

HSP 1 Score: 255.0 bits (650), Expect = 3.2e-68
Identity = 131/162 (80.86%), Postives = 139/162 (85.80%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL KMA  VRTGGKG+VRRKKKAVHKTTTTDDKRLQSTLKR+GVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRVGVNSIPAIEEVNIF 60

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF NPKVQASIAANTWVVSG+PQTKKLQDILP II+QLGPDNLDNL+KLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGTPQTKKLQDILPQIISQLGPDNLDNLKKLAEQFQ 120

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEK 163
           KQAPGAG       A    EDDDDDVPDLV G+TFE  A E+
Sbjct: 121 KQAPGAG----DVPATIQEEDDDDDVPDLVVGETFETPATEE 158

[Close]

BLAST of MELO3C002159 vs. TAIR10
Match: AT1G17880.1 (AT1G17880.1 basic transcription factor 3)

HSP 1 Score: 250.8 bits (639), Expect = 6.1e-67
Identity = 132/162 (81.48%), Postives = 141/162 (87.04%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL KMA  VRTGGKG+VRRKKKAVHKT TTDDKRLQSTLKRIGVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRKKKAVHKTNTTDDKRLQSTLKRIGVNSIPAIEEVNIF 60

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILP II+QLGPDN+DNL+KLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGSPQTKKLQDILPQIISQLGPDNMDNLKKLAEQFQ 120

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEK 163
           KQA G G     AA+A   E+DDDDVP+LV G+TFE AAEEK
Sbjct: 121 KQASGEG----NAASATIQEEDDDDVPELV-GETFETAAEEK 157

[Close]

BLAST of MELO3C002159 vs. NCBI nr
Match: gi|659066946|ref|XP_008467234.1| (PREDICTED: transcription factor BTF3 homolog 4-like [Cucumis melo])

HSP 1 Score: 323.9 bits (829), Expect = 1.6e-85
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS 166
           KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS
Sbjct: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS 165

[Close]

BLAST of MELO3C002159 vs. NCBI nr
Match: gi|449439495|ref|XP_004137521.1| (PREDICTED: transcription factor BTF3 homolog 4-like [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 1.3e-82
Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS 166
           KQAPG GAG  AAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS
Sbjct: 121 KQAPGVGAG--AAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS 163

[Close]

BLAST of MELO3C002159 vs. NCBI nr
Match: gi|700209106|gb|KGN64202.1| (hypothetical protein Csa_1G043055 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 1.3e-82
Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 77  MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 136

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 137 KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 196

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS 166
           KQAPG GAG  AAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS
Sbjct: 197 KQAPGVGAG--AAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS 239

[Close]

BLAST of MELO3C002159 vs. NCBI nr
Match: gi|1009133550|ref|XP_015883963.1| (PREDICTED: transcription factor BTF3 homolog 4-like [Ziziphus jujuba])

HSP 1 Score: 283.5 bits (724), Expect = 2.4e-73
Identity = 147/165 (89.09%), Postives = 152/165 (92.12%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL KMAGAVRTGGKGS+RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MNREKLMKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILP I+NQLGPDNLDNL+KLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGSPQTKKLQDILPSILNQLGPDNLDNLKKLAEQFQ 120

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEEKQAS 166
           KQAPGAGAG  AAAA A  EDDDDDVPDLV GQTFEAAAEE  A+
Sbjct: 121 KQAPGAGAGDGAAAATA-PEDDDDDVPDLVAGQTFEAAAEEGHAA 164

[Close]

BLAST of MELO3C002159 vs. NCBI nr
Match: gi|225457458|ref|XP_002265041.1| (PREDICTED: transcription factor BTF3 homolog 4 [Vitis vinifera])

HSP 1 Score: 282.0 bits (720), Expect = 7.0e-73
Identity = 146/161 (90.68%), Postives = 150/161 (93.17%), Query Frame = 1


Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL KMAGAVRTGGKGS+RRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MNREKLMKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF NPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 121 KQAPGAGAGAAAAAAAANGEDDDDDVPDLVEGQTFEAAAEE 162
           KQAPGAGAGAAAA      +DDDD+VPDLV GQTFEAAAEE
Sbjct: 121 KQAPGAGAGAAAAQ-----DDDDDEVPDLVAGQTFEAAAEE 156

The following BLAST results are available for this feature:

BLAST of MELO3C002159 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BTF3L_ARATH	5.7e-67	80.86	Nascent polypeptide-associated complex subunit beta OS=Arabidopsis thaliana GN=A...	[more]
BTF3_ARATH	1.1e-65	81.48	Basic transcription factor 3 OS=Arabidopsis thaliana GN=BTF3 PE=1 SV=1	[more]
BTF3_HUMAN	6.6e-39	52.76	Transcription factor BTF3 OS=Homo sapiens GN=BTF3 PE=1 SV=1	[more]
BTF3_MOUSE	6.6e-39	52.76	Transcription factor BTF3 OS=Mus musculus GN=Btf3 PE=1 SV=3	[more]
BT3L4_DANRE	1.5e-38	52.76	Transcription factor BTF3 homolog 4 OS=Danio rerio GN=btf3l4 PE=2 SV=1	[more]

BLAST of MELO3C002159 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTU8_CUCSA	8.8e-83	98.18	Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus GN=Csa_1G...	[more]
A0A0U4IR75_ZIZJJ	1.7e-73	89.09	Nascent polypeptide-associated complex subunit beta OS=Ziziphus jujuba GN=BTF3 P...	[more]
D7TXR6_VITVI	4.8e-73	90.68	Nascent polypeptide-associated complex subunit beta OS=Vitis vinifera GN=VIT_17s...	[more]
A0A0B0MH75_GOSAR	1.2e-71	86.06	Nascent polypeptide-associated complex subunit beta OS=Gossypium arboreum GN=F38...	[more]
A0A165WBJ6_DAUCA	7.7e-71	86.59	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_015291 PE=4 SV=1	[more]

BLAST of MELO3C002159 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73230.1	3.2e-68	80.86	Nascent polypeptide-associated complex NAC	[more]
AT1G17880.1	6.1e-67	81.48	basic transcription factor 3	[more]

BLAST of MELO3C002159 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659066946\|ref\|XP_008467234.1\|	1.6e-85	100.00	PREDICTED: transcription factor BTF3 homolog 4-like [Cucumis melo]	[more]
gi\|449439495\|ref\|XP_004137521.1\|	1.3e-82	98.18	PREDICTED: transcription factor BTF3 homolog 4-like [Cucumis sativus]	[more]
gi\|700209106\|gb\|KGN64202.1\|	1.3e-82	98.18	hypothetical protein Csa_1G043055 [Cucumis sativus]	[more]
gi\|1009133550\|ref\|XP_015883963.1\|	2.4e-73	89.09	PREDICTED: transcription factor BTF3 homolog 4-like [Ziziphus jujuba]	[more]
gi\|225457458\|ref\|XP_002265041.1\|	7.0e-73	90.68	PREDICTED: transcription factor BTF3 homolog 4 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002715	Nas_poly-pep-assoc_cplx_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU45014	melon EST collection version 4.0	transcribed_cluster
MU61265	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002159T2	MELO3C002159T2	mRNA
MELO3C002159T1	MELO3C002159T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU45014	MU45014	transcribed_cluster
MU61265	MU61265	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C002159	Cla008391	Watermelon (97103) v1	mewmB166
MELO3C002159	ClCG01G014900	Watermelon (Charleston Gray)	mewcgB130
MELO3C002159	Cla97C01G013930	Watermelon (97103) v2	mewmbB133
MELO3C002159	Bhi08G001103	Wax gourd	mewgoB173
MELO3C002159	Cucsa.122190	Cucumber (Gy14) v1	cgymeB185
MELO3C002159	CmaCh13G009680	Cucurbita maxima (Rimu)	cmameB193
MELO3C002159	CmaCh18G000920	Cucurbita maxima (Rimu)	cmameB365
MELO3C002159	CmoCh18G000690	Cucurbita moschata (Rifu)	cmomeB356
MELO3C002159	CmoCh13G010020	Cucurbita moschata (Rifu)	cmomeB180
MELO3C002159	Lsi02G002620	Bottle gourd (USVL1VR-Ls)	lsimeB179
MELO3C002159	Cp4.1LG20g01770	Cucurbita pepo (Zucchini)	cpemeB478
MELO3C002159	Cp4.1LG09g11010	Cucurbita pepo (Zucchini)	cpemeB026
MELO3C002159	CsGy1G007320	Cucumber (Gy14) v2	cgybmeB022
MELO3C002159	Carg04871	Silver-seed gourd	carmeB0393
MELO3C002159	Carg06647	Silver-seed gourd	carmeB0499

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C002159	Cucumber (Chinese Long) v3	cucmeB024
MELO3C002159	Wild cucumber (PI 183967)	cpimeB024
MELO3C002159	Cucumber (Chinese Long) v2	cumeB027