Cp4.1LG08g05480 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g05480
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPhosphatase methylesterase 1
LocationCp4.1LG08 : 833612 .. 834345 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGATAAGAAAAAACGGATCTTGCCTTCTCTCTCTCTAAGACTTTAAGATATATATATATATATATATATATATATACTCTCGTCTACGTGCTTCATCGTTCTCGTTGGTAATGGCTTCTTGGAAGAAAACCATAATTTCTCCTATTAGAAAGGCTTGCACCATCTTCAACCAACACCCGAGAGACTCGAAGAAGTCCCACTCCGACTCCGACTCAGGTGAGCTCTCGGGTTTTCTTTTGAATTTTCAACGACGGAGCAAAAAATAAAGAAAATGGTCTTATTTTAAGTTTCTTTTGTAGAGCAAGAGAAGCGAGTAGACGTGAGAGACCTACAAGGAGAGGTGATGGCATGTGGGTATGAAGACGTGCAAGTTATGTGGTCTATTTTAGACAAGACTAACTCTACTACAGCCGCCGCCACCACCAACTCCACCGTCTATAATATGTCTTCTTAATCATCGTCGTGGTGGTCGCCGTTGTCACGGCCGTGGCCAAAAGATTGTAGATAACTCTTTTTCTCTATTTCTCGGTGAGTTATGATTTCGTTATGTTTATAGGGAAGGAATGAATCCCCATGATTTGAAGAAGCTCTTAATCATGGTGAGACTTATTACTCTTAGTTAATGTAAAAATTAAATCTCTTTCCTAGTGGGAAATGGAACCTCATCTTTCTCACCCGTATTTTGATTTAGAGAGAGATTTTTTAAATTTCTTTGTAGTAATAGAATAGAACA

mRNA sequence

TAGATAAGAAAAAACGGATCTTGCCTTCTCTCTCTCTAAGACTTTAAGATATATATATATATATATATATATATATACTCTCGTCTACGTGCTTCATCGTTCTCGTTGGTAATGGCTTCTTGGAAGAAAACCATAATTTCTCCTATTAGAAAGGCTTGCACCATCTTCAACCAACACCCGAGAGACTCGAAGAAGTCCCACTCCGACTCCGACTCAGAGCAAGAGAAGCGAGTAGACGTGAGAGACCTACAAGGAGAGGTGATGGCATGTGGGTATGAAGACGTGCAAGTTATGTGGTCTATTTTAGACAAGACTAACTCTACTACAGCCGCCGCCACCACCAACTCCACCGTCTATAATATGTCTTCTTAATCATCGTCGTGGTGGTCGCCGTTGTCACGGCCGTGGCCAAAAGATTGTAGATAACTCTTTTTCTCTATTTCTCGGTGAGTTATGATTTCGTTATGTTTATAGGGAAGGAATGAATCCCCATGATTTGAAGAAGCTCTTAATCATGGTGAGACTTATTACTCTTAGTTAATGTAAAAATTAAATCTCTTTCCTAGTGGGAAATGGAACCTCATCTTTCTCACCCGTATTTTGATTTAGAGAGAGATTTTTTAAATTTCTTTGTAGTAATAGAATAGAACA

Coding sequence (CDS)

ATGGCTTCTTGGAAGAAAACCATAATTTCTCCTATTAGAAAGGCTTGCACCATCTTCAACCAACACCCGAGAGACTCGAAGAAGTCCCACTCCGACTCCGACTCAGAGCAAGAGAAGCGAGTAGACGTGAGAGACCTACAAGGAGAGGTGATGGCATGTGGGTATGAAGACGTGCAAGTTATGTGGTCTATTTTAGACAAGACTAACTCTACTACAGCCGCCGCCACCACCAACTCCACCGTCTATAATATGTCTTCTTAA

Protein sequence

MASWKKTIISPIRKACTIFNQHPRDSKKSHSDSDSEQEKRVDVRDLQGEVMACGYEDVQVMWSILDKTNSTTAAATTNSTVYNMSS
Homology
[Close]
BLAST of Cp4.1LG08g05480 vs. TrEMBL
Match: A0A0A0L5H1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171230 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 6.3e-24
Identity = 66/87 (75.86%), Postives = 72/87 (82.76%), Query Frame = 1 

Query: 1  MASWKKTIISPIRKACTIFNQHPRDS-KKSHSDSDSEQEKRVDVRDLQGEVMACGYEDVQ 60
          MASWKKTIISP RKACTIFNQ+PRD  KKSHS  DSEQEKRVDVR+LQGEVMACGYEDV 
Sbjct: 1  MASWKKTIISPFRKACTIFNQNPRDHPKKSHS--DSEQEKRVDVRNLQGEVMACGYEDVH 60

Query: 61 VMWSILDKTNSTTAAATTNSTVYNMSS 87
          VMWSILD  +   +AATT +   N+SS
Sbjct: 61 VMWSILD--HKANSAATTATATCNVSS 83

[Close]
BLAST of Cp4.1LG08g05480 vs. TrEMBL
Match: A0A059B5L7_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_H04140 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.3e-18
Identity = 50/72 (69.44%), Postives = 55/72 (76.39%), Query Frame = 1 

Query: 1   MASWKKTIISPIRKACTIFNQHPRDSKKSHSDSDSEQEKRVDVRDLQGEVMACGYEDVQV 60
           MASWKKTI SP RKACT FNQ P   KKSH     E EKRV++ +LQGEVMAC YEDVQV
Sbjct: 42  MASWKKTITSPFRKACTFFNQSPSRDKKSHQ----EHEKRVNMMNLQGEVMACAYEDVQV 101

Query: 61  MWSILDKTNSTT 73
           MWSILDK+ + T
Sbjct: 102 MWSILDKSKAIT 109

[Close]
BLAST of Cp4.1LG08g05480 vs. TrEMBL
Match: A0A067K874_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19104 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 5.1e-18
Identity = 51/78 (65.38%), Postives = 56/78 (71.79%), Query Frame = 1 

Query: 1  MASWKKTIISPIRKACTIFNQHPRDSKKSHSDSDSEQEKRVDVRDLQGEVMACGYEDVQV 60
          MASWKKTI SP +KACT FNQ PRD K   S  +   E RV V DL GEVMACGYEDVQV
Sbjct: 1  MASWKKTIASPFKKACTFFNQQPRDKK---SQPEPGNENRVMVMDLHGEVMACGYEDVQV 60

Query: 61 MWSILDKTNSTTAAATTN 79
          MWSILDK+ ST    T++
Sbjct: 61 MWSILDKSKSTNCNLTSS 75

[Close]
BLAST of Cp4.1LG08g05480 vs. TrEMBL
Match: V7CC75_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G124400g PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-17
Identity = 54/80 (67.50%), Postives = 60/80 (75.00%), Query Frame = 1 

Query: 1  MASWKKTIISPIRKACTIFN-QHPRDSKKSHSDSDSEQEKRVDVRDLQGEVMACGYEDVQ 60
          MASWKKTI +P +KACT FN Q PRD KKS      EQE+RV   DLQGEVMACGYEDVQ
Sbjct: 1  MASWKKTITTPFKKACTFFNNQPPRDQKKSQP----EQERRV--MDLQGEVMACGYEDVQ 60

Query: 61 VMWSILDKTNSTTAAATTNS 80
          VMWSILDK+ ST    T++S
Sbjct: 61 VMWSILDKSKSTNCNITSSS 74

[Close]
BLAST of Cp4.1LG08g05480 vs. TrEMBL
Match: I1MS04_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G042600 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-16
Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 1 

Query: 1  MASWKKTIISPIRKACTIFNQH--PRDSKKSHSDSDSEQEKRVDVRDLQGEVMACGYEDV 60
          MASWKKTI +P +KACT+F Q   PRD KKS +    EQE++V   DLQGEVMACGYEDV
Sbjct: 1  MASWKKTITTPFKKACTVFKQQQPPRDQKKSQT----EQERQV--MDLQGEVMACGYEDV 60

Query: 61 QVMWSILDKTNSTTAAATTNS 80
          QVMWSILDK+ ST    T+++
Sbjct: 61 QVMWSILDKSKSTNCNITSST 75

[Close]
BLAST of Cp4.1LG08g05480 vs. TAIR10
Match: AT1G48330.1 (AT1G48330.1 unknown protein)

HSP 1 Score: 85.9 bits (211), Expect = 1.3e-17
Identity = 42/71 (59.15%), Postives = 56/71 (78.87%), Query Frame = 1 

Query: 1  MASWKKTIISPIRKACTIFNQHPRDSKKSHSDSDSEQEKRVDVRDLQGEVMACGYEDVQV 60
          MASWKKTI +P +KA T FNQ  + ++ +++ +  E EKR  V++LQG+VMACGYEDV V
Sbjct: 1  MASWKKTIATPFKKAATFFNQPQQTNRHANAKAREEHEKRT-VQELQGDVMACGYEDVLV 60

Query: 61 MWSILDKTNST 72
          MWSILDK+NS+
Sbjct: 61 MWSILDKSNSS 70

[Close]
BLAST of Cp4.1LG08g05480 vs. TAIR10
Match: AT3G17580.1 (AT3G17580.1 unknown protein)

HSP 1 Score: 82.4 bits (202), Expect = 1.5e-16
Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = 1 

Query: 1  MASWKKTIISPIRKACTIFNQHPRDSKKS-----HSDSDSEQEKRVDVRDLQGEVMACGY 60
          MASWKKTI +P +KA T FNQ  +  KK       + +  E EKR+ V++LQGEVMACGY
Sbjct: 1  MASWKKTIATPFKKAATFFNQPQQSPKKGCRGRMDAQAREEHEKRM-VQELQGEVMACGY 60

Query: 61 EDVQVMWSILDKTNST 72
          +DV VMWSILDK+NS+
Sbjct: 61 DDVLVMWSILDKSNSS 75

[Close]
BLAST of Cp4.1LG08g05480 vs. NCBI nr
Match: gi|659077054|ref|XP_008439007.1| (PREDICTED: uncharacterized protein LOC103483930 isoform X3 [Cucumis melo])

HSP 1 Score: 122.5 bits (306), Expect = 3.7e-25
Identity = 66/86 (76.74%), Postives = 72/86 (83.72%), Query Frame = 1 

Query: 1  MASWKKTIISPIRKACTIFNQHPRDSKKSHSDSDSEQEKRVDVRDLQGEVMACGYEDVQV 60
          MASWKKTIISP RKACTIFNQ+PRD KKSHS  DSEQEKRVDVR+LQGEVMACGYEDV V
Sbjct: 1  MASWKKTIISPFRKACTIFNQNPRDPKKSHS--DSEQEKRVDVRNLQGEVMACGYEDVHV 60

Query: 61 MWSILDKTNSTTAAATTNSTVYNMSS 87
          MWSILD  +   +AATT +   N+SS
Sbjct: 61 MWSILD--HKANSAATTATATCNVSS 82

[Close]
BLAST of Cp4.1LG08g05480 vs. NCBI nr
Match: gi|449459806|ref|XP_004147637.1| (PREDICTED: uncharacterized protein LOC101206709 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 9.0e-24
Identity = 66/87 (75.86%), Postives = 72/87 (82.76%), Query Frame = 1 

Query: 1  MASWKKTIISPIRKACTIFNQHPRDS-KKSHSDSDSEQEKRVDVRDLQGEVMACGYEDVQ 60
          MASWKKTIISP RKACTIFNQ+PRD  KKSHS  DSEQEKRVDVR+LQGEVMACGYEDV 
Sbjct: 1  MASWKKTIISPFRKACTIFNQNPRDHPKKSHS--DSEQEKRVDVRNLQGEVMACGYEDVH 60

Query: 61 VMWSILDKTNSTTAAATTNSTVYNMSS 87
          VMWSILD  +   +AATT +   N+SS
Sbjct: 61 VMWSILD--HKANSAATTATATCNVSS 83

[Close]
BLAST of Cp4.1LG08g05480 vs. NCBI nr
Match: gi|629095418|gb|KCW61413.1| (hypothetical protein EUGRSUZ_H04140, partial [Eucalyptus grandis])

HSP 1 Score: 99.4 bits (246), Expect = 3.3e-18
Identity = 50/72 (69.44%), Postives = 55/72 (76.39%), Query Frame = 1 

Query: 1   MASWKKTIISPIRKACTIFNQHPRDSKKSHSDSDSEQEKRVDVRDLQGEVMACGYEDVQV 60
           MASWKKTI SP RKACT FNQ P   KKSH     E EKRV++ +LQGEVMAC YEDVQV
Sbjct: 42  MASWKKTITSPFRKACTFFNQSPSRDKKSHQ----EHEKRVNMMNLQGEVMACAYEDVQV 101

Query: 61  MWSILDKTNSTT 73
           MWSILDK+ + T
Sbjct: 102 MWSILDKSKAIT 109

[Close]
BLAST of Cp4.1LG08g05480 vs. NCBI nr
Match: gi|702447391|ref|XP_010024889.1| (PREDICTED: uncharacterized protein LOC104415311 [Eucalyptus grandis])

HSP 1 Score: 99.4 bits (246), Expect = 3.3e-18
Identity = 50/72 (69.44%), Postives = 55/72 (76.39%), Query Frame = 1 

Query: 1  MASWKKTIISPIRKACTIFNQHPRDSKKSHSDSDSEQEKRVDVRDLQGEVMACGYEDVQV 60
          MASWKKTI SP RKACT FNQ P   KKSH     E EKRV++ +LQGEVMAC YEDVQV
Sbjct: 1  MASWKKTITSPFRKACTFFNQSPSRDKKSHQ----EHEKRVNMMNLQGEVMACAYEDVQV 60

Query: 61 MWSILDKTNSTT 73
          MWSILDK+ + T
Sbjct: 61 MWSILDKSKAIT 68

[Close]
BLAST of Cp4.1LG08g05480 vs. NCBI nr
Match: gi|802706977|ref|XP_012084229.1| (PREDICTED: uncharacterized protein LOC105643649 [Jatropha curcas])

HSP 1 Score: 98.2 bits (243), Expect = 7.4e-18
Identity = 51/78 (65.38%), Postives = 56/78 (71.79%), Query Frame = 1 

Query: 1  MASWKKTIISPIRKACTIFNQHPRDSKKSHSDSDSEQEKRVDVRDLQGEVMACGYEDVQV 60
          MASWKKTI SP +KACT FNQ PRD K   S  +   E RV V DL GEVMACGYEDVQV
Sbjct: 1  MASWKKTIASPFKKACTFFNQQPRDKK---SQPEPGNENRVMVMDLHGEVMACGYEDVQV 60

Query: 61 MWSILDKTNSTTAAATTN 79
          MWSILDK+ ST    T++
Sbjct: 61 MWSILDKSKSTNCNLTSS 75

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g05480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG08g05480 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5H1_CUCSA6.3e-2475.86Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171230 PE=4 SV=1[more]
A0A059B5L7_EUCGR2.3e-1869.44Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_H04140 PE=4 ... [more]
A0A067K874_JATCU5.1e-1865.38Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19104 PE=4 SV=1[more]
V7CC75_PHAVU2.0e-1767.50Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G124400g PE=4 SV=1[more]
I1MS04_SOYBN1.3e-1662.96Uncharacterized protein OS=Glycine max GN=GLYMA_17G042600 PE=4 SV=1[more]
BLAST of Cp4.1LG08g05480 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G48330.11.3e-1759.15 unknown protein[more]
AT3G17580.11.5e-1657.89 unknown protein[more]
BLAST of Cp4.1LG08g05480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077054|ref|XP_008439007.1|3.7e-2576.74PREDICTED: uncharacterized protein LOC103483930 isoform X3 [Cucumis melo][more]
gi|449459806|ref|XP_004147637.1|9.0e-2475.86PREDICTED: uncharacterized protein LOC101206709 [Cucumis sativus][more]
gi|629095418|gb|KCW61413.1|3.3e-1869.44hypothetical protein EUGRSUZ_H04140, partial [Eucalyptus grandis][more]
gi|702447391|ref|XP_010024889.1|3.3e-1869.44PREDICTED: uncharacterized protein LOC104415311 [Eucalyptus grandis][more]
gi|802706977|ref|XP_012084229.1|7.4e-1865.38PREDICTED: uncharacterized protein LOC105643649 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0015969 guanosine tetraphosphate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g05480.1Cp4.1LG08g05480.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33181FAMILY NOT NAMEDcoord: 2..72
score: 1.7
NoneNo IPR availablePANTHERPTHR33181:SF10GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MKP6coord: 2..72
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g05480Cucsa.252090Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g05480CmaCh14G015510Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g05480CmaCh06G015940Cucurbita maxima (Rimu)cmacpeB853
Cp4.1LG08g05480CmoCh06G015890Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g05480CmoCh14G015870Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g05480Cla021837Watermelon (97103) v1cpewmB845
Cp4.1LG08g05480Csa3G171230Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g05480MELO3C006761Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g05480ClCG05G006950Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g05480CSPI03G15450Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g05480Lsi05G013760Bottle gourd (USVL1VR-Ls)cpelsiB715
Cp4.1LG08g05480CsaV3_3G015620Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g05480Bhi01G000833Wax gourdcpewgoB1110
Cp4.1LG08g05480CsGy3G015520Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g05480Carg25663Silver-seed gourdcarcpeB1043
Cp4.1LG08g05480Carg19589Silver-seed gourdcarcpeB0396
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g05480Cp4.1LG03g12120Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g05480Cucurbita maxima (Rimu)cmacpeB412
Cp4.1LG08g05480Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g05480Bottle gourd (USVL1VR-Ls)cpelsiB697
Cp4.1LG08g05480Watermelon (97103) v1cpewmB853
Cp4.1LG08g05480Melon (DHL92) v3.5.1cpemeB793
Cp4.1LG08g05480Melon (DHL92) v3.6.1cpemedB951