Cp4.1LG08g04360 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g04360
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptiontRNA/rRNA methyltransferase family protein
LocationCp4.1LG08 : 1509651 .. 1513006 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACGACACCGTATTGAAAAGAATTCATCAGACGCCCGGGCCAGGCTGAACTGTGAACCGCTCCTTCTTCTTCGATCCGCCGCCAGAACTGAGTTGCGGGCTCTGTCAAAACCCTCAATCCGTAAACCCCATCACTTTCTCTTCAATCATTTCATCGCCATTGAATTCGAAATGGGGTTCGAAAGCTACGTCGTCGTACATAACATAGCCAAAAGGCACAACGTTGGCACATTGGCCCGAAGCGCCACCGCGTTCGGTGTATCGGAGGTCATCCTCGTCGGCCGTCGGGACTTCAACGCCTTTGGTAGCCATGGTTCCACTTCTCACGTCCGGTTCCGTCATTTTCATTCCCTTCTCGACGCCCGAAATTTCCTTCAGGTTCTGCCCTCTTTCTTTCTTCCCTTCATCGGTCTCGATTAGGTTATGGGTTTGTTTTGAAATTTGAATTTTTTTCTGTCTGTGTCTGTAGGAGAAGGATTGTGATATATGTGGCGTGGAGATCACTGATAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTCGGCAACGAGGTTGGTTTTTGTGTTGGAATTCCATTTTTTATTGCATTTATTAATCACCATATGCTGCTGTCAGTTAATAAGTTCTTCTCTAATTCCATTATACATAGGACCTGTAGAGCTTATTGTCTCCCATTAGTTCTTTCATTTTTCTCAATTACAACTCGGTTTCTCACATATTGTGAGATCCCACATCGATGGGGGAAGTTAACAAAACGTTCTTTATAAGGGTGTGGAAACCTTTTCCTAGCAGACGCAAAGGAAAAGTCCAAAGAGGACAATATAGCGGTGGACTTAGGCCGTTACAAATAGTATGAGAGCTAGACACCGGGCGATGTACCAGCCAGGAGCCTAAGCCCTCGAAGGGTGTGGACATGAGACGATATGCCAGAAAGGACGCTGGGCCACGAAAGGAGGTGGATTGGAGGATCCCACATCGATTGGAGAAGGGAACGAGTGCTAGCAAGGATGGTAGACCCTAAAGGGGGTGGATTGTGAGATCTCACATCGGTTGGGGAGGAGAACGAAACACTCTTTATAAAGGTGTGGAAACCTCTTCCTAGCAGACACGTTTTAAAAATCTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAAGACAACATCTGCTAGTGGTGGGCTTGGAGGCGGCGATGAGTTTAATGCAAGGAGTGAACTCCGATTCCTTGATGAAAAAAATAAACGATAATTGCTTAAAGTTTCTCTGGCAATCATATTCTCTGTGATGGATTATTCTTCCATTTCTTGATGTGATGTCATTAGGATTTAATATGTCATTTTAGATCTCTTGCTTTTTTCTTAAGTCCATGTCTCTATGATGTTCTAGGCATTGTGAGTTAGTTCGTAGCATGATCATCAAGATTGAATTGGATCAGAATCATTTGGAAATAATTTTGATACACTAATTCAGCAAGAAGACACCCTTTTGATGTTTATATGCATATGATATTTCTAGGGAACAGGGCTTTCAGCTAAAGAGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTCGGCACCGCTTCTTTGAATGTCACTGTAGCTGCTTCAATTGTCCTACATCATTTTGGTGGTAATTAATACTCAGAACTGTTGCATTTTCATCTCCCCCTTTTGAGTTTCTTTTAAATACATGTCTAATCTCTATCACCTATGAGAATTACCAGTCTCTCTTAATGTTTTCGGTTTGATACGTTTGGTTTTTTACCATGTAAAATCATGAGTACTGTAAAATTACGTGATCGATGGAAGGACTTTAGGAAGAAATGCATATATGTCTTAAAAGTGTGTAAGGAGGGGCAGTTATCTGATCTGATTATTTTGATCCCTTTCTCTGAGTTCTGAATCAGTTCATTATGGGAAATGATCCCTTCAAGCTGAAACTTAGGAAACTGTGTCCTAGGAATTAGTATGGCTTGGTTGAATCAAATGATGTTGCAGTTTTTAATAGCTCTCATACTTGGTATTAACGATCATCTTGGATCGACATTAAGTATGCATGCTGTAATAGCCCAAGCCTACCGCTAGCAGATATTGTCATCTTTAGGCTTCTCCACAAGGTTTTTAAAACGCATCTACTAGGGAGAGGTTTCCATATCATTATAAAGAGTACTTCGTTCTCCTCCCTAACCGATGTGGGATCTCACAATCCACCCCCCTTTGGGGCCTAGCCTCCTCGCCGACACTCGTTCCCTTCTCCAATCAATGTGGGACCCCTCCAATTCACCCCCTTTTGGGGCCCAGCGTTCTTGCTGGCACACCGCCGTGTGTTCACCCCCTTTCGGGGCTTAGCTTCCTTGTTGGCACATCGCCCATTGTCTAGCTCTGATACCATTTGTAACAACCCAAGCCCCACTAGTAGATCCTGTTCTCTTTGGGCTTTCCCTTTCAGACTTCCTCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTTCTCCTATTATTGTATTAGGGTTCTTTCTCATGTGTGTATATTGGAGGTTTAAGTGAAAATCAGGTTGGTTATGCCTTATTTGATGAACTGGAAATGATACTTGTCCCCTTTTCTAGACATTATTGACCTCTCATCAACCATGTTTTTCAGTTTGGGCAGGCTTTCCCGAGCGATGTCGTGATGGTAACAAGTTTATAGTGGCCGAAAGACCAGTAAAGCAAGGCAAGCGGAATTATTGCCCTGAAACAGAAGAATCTATTGTTGAAGAGCGAAAGTCCAGGCGGGATAATGCTTCGAAAGGCTTCTTTGACGAGGGAACGATCGATGATTCGACATCCAACCTTCTTGATACATTGTTTATTAACGAATGAACGGAGTTGAAGCTGGGAGTCGTCATTCGACATCCAACCTTCTTGATACACAACCCACAGCAGACTGCATGATTATTGTAGCTCATTGCTGGAAGCTGTTCTGGAAAGAAAGAACTCCTTCTCCTTTGTCTTTATCTTTTTTTGTTCTTAGATTTCGATATTCCTAGAACGTTCGTGCAGTTATATTTAGTTAATTAGCTTGATGACTTACTCGGTCGTTTCGTCGAAAGGTACTTCCGACCACCACATTGTTAAGGCAAGTTTGTAAGAATAGGACAGAAAGCAAGCAGAAGGCAGAAGGATTTAAAGCAAAGGGTTGCAAGGTTGACTCAAACATGTTCTTCATTAGGGATGCCATTGATACATACTTAGATTACTTATACAAAAGTTATATCAGTTTGTACCATTTGGAAATTTTGGCTAAATCTTAT

mRNA sequence

AAACGACACCGTATTGAAAAGAATTCATCAGACGCCCGGGCCAGGCTGAACTGTGAACCGCTCCTTCTTCTTCGATCCGCCGCCAGAACTGAGTTGCGGGCTCTGTCAAAACCCTCAATCCGTAAACCCCATCACTTTCTCTTCAATCATTTCATCGCCATTGAATTCGAAATGGGGTTCGAAAGCTACGTCGTCGTACATAACATAGCCAAAAGGCACAACGTTGGCACATTGGCCCGAAGCGCCACCGCGTTCGGTGTATCGGAGGTCATCCTCGTCGGCCGTCGGGACTTCAACGCCTTTGGTAGCCATGGTTCCACTTCTCACGTCCGGTTCCGTCATTTTCATTCCCTTCTCGACGCCCGAAATTTCCTTCAGGAGAAGGATTGTGATATATGTGGCGTGGAGATCACTGATAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTCGGCAACGAGGGAACAGGGCTTTCAGCTAAAGAGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTCGGCACCGCTTCTTTGAATGTCACTGTAGCTGCTTCAATTGTCCTACATCATTTTGGTGTTTGGGCAGGCTTTCCCGAGCGATGTCGTGATGGTAACAAGTTTATAGTGGCCGAAAGACCAGTAAAGCAAGGCAAGCGGAATTATTGCCCTGAAACAGAAGAATCTATTGTTGAAGAGCGAAAGTCCAGGCGGGATAATGCTTCGAAAGGCTTCTTTGACGAGGGAACGATCGATGATTCGACATCCAACCTTCTTGATACATTGTTTATTAACGAATGAACGGAGTTGAAGCTGGGAGTCGTCATTCGACATCCAACCTTCTTGATACACAACCCACAGCAGACTGCATGATTATTGTAGCTCATTGCTGGAAGCTGTTCTGGAAAGAAAGAACTCCTTCTCCTTTGTCTTTATCTTTTTTTGTTCTTAGATTTCGATATTCCTAGAACGTTCGTGCAGTTATATTTAGTTAATTAGCTTGATGACTTACTCGGTCGTTTCGTCGAAAGGTACTTCCGACCACCACATTGTTAAGGCAAGTTTGTAAGAATAGGACAGAAAGCAAGCAGAAGGCAGAAGGATTTAAAGCAAAGGGTTGCAAGGTTGACTCAAACATGTTCTTCATTAGGGATGCCATTGATACATACTTAGATTACTTATACAAAAGTTATATCAGTTTGTACCATTTGGAAATTTTGGCTAAATCTTAT

Coding sequence (CDS)

ATGGGGTTCGAAAGCTACGTCGTCGTACATAACATAGCCAAAAGGCACAACGTTGGCACATTGGCCCGAAGCGCCACCGCGTTCGGTGTATCGGAGGTCATCCTCGTCGGCCGTCGGGACTTCAACGCCTTTGGTAGCCATGGTTCCACTTCTCACGTCCGGTTCCGTCATTTTCATTCCCTTCTCGACGCCCGAAATTTCCTTCAGGAGAAGGATTGTGATATATGTGGCGTGGAGATCACTGATAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTCGGCAACGAGGGAACAGGGCTTTCAGCTAAAGAGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTCGGCACCGCTTCTTTGAATGTCACTGTAGCTGCTTCAATTGTCCTACATCATTTTGGTGTTTGGGCAGGCTTTCCCGAGCGATGTCGTGATGGTAACAAGTTTATAGTGGCCGAAAGACCAGTAAAGCAAGGCAAGCGGAATTATTGCCCTGAAACAGAAGAATCTATTGTTGAAGAGCGAAAGTCCAGGCGGGATAATGCTTCGAAAGGCTTCTTTGACGAGGGAACGATCGATGATTCGACATCCAACCTTCTTGATACATTGTTTATTAACGAATGA

Protein sequence

MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE
Homology
[Close]
BLAST of Cp4.1LG08g04360 vs. Swiss-Prot
Match: TRMHL_STAHJ (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH2477 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.9e-11
Identity = 47/146 (32.19%), Postives = 71/146 (48.63%), Query Frame = 1 

Query: 2   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFR 61
           G  + V++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV   
Sbjct: 93  GLSTVVILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVM 152

Query: 62  HFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L    + L+E    + G E  DNA            A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKEHGYWVAGAE-ADNATDYRDMAADMPLAIVIGSEGQGMSRLVKDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of Cp4.1LG08g04360 vs. Swiss-Prot
Match: TRMHL_STAAM (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0531 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-10
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 1 

Query: 2   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFR 61
           G  + +++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L    + L++    + G E  +NA          S A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of Cp4.1LG08g04360 vs. Swiss-Prot
Match: TRMHL_STAAN (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain N315) GN=SA0490 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-10
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 1 

Query: 2   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFR 61
           G  + +++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L    + L++    + G E  +NA          S A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of Cp4.1LG08g04360 vs. Swiss-Prot
Match: TRMHL_STAAR (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0535 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-10
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 1 

Query: 2   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFR 61
           G  + +++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L    + L++    + G E  +NA          S A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of Cp4.1LG08g04360 vs. Swiss-Prot
Match: TRMHL_STAAS (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0489 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-10
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 1 

Query: 2   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFR 61
           G  + +++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L    + L++    + G E  +NA          S A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of Cp4.1LG08g04360 vs. TrEMBL
Match: A0A0A0LAH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150750 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 3.7e-113
Identity = 199/218 (91.28%), Postives = 212/218 (97.25%), Query Frame = 1 

Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           MG ESYVVVHNIAKRHNVGT+ARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDA+ FL+EKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFF+Y
Sbjct: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDG+KFIVAERPV+Q KRNYC ETEE
Sbjct: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGSKFIVAERPVRQVKRNYCTETEE 180

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 219
           SI+EERKSRR+NASKGFFDEG ID+S SNLLDTLFI++
Sbjct: 181 SIMEERKSRRENASKGFFDEGMIDESASNLLDTLFIDQ 218

[Close]
BLAST of Cp4.1LG08g04360 vs. TrEMBL
Match: A5AVL9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02300 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 9.4e-101
Identity = 181/215 (84.19%), Postives = 194/215 (90.23%), Query Frame = 1 

Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           M  ESYVVVHNIAKRHNVGTLARSA+A GVSE+ILVGRRDFN+FGSHGSTSH+RFRHFHS
Sbjct: 1   MVVESYVVVHNIAKRHNVGTLARSASALGVSELILVGRRDFNSFGSHGSTSHLRFRHFHS 60

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDAR+FL+EKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLS KEC ICDFF+Y
Sbjct: 61  LLDARHFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSVKECEICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYG GTASLNVTVAASIVLHHFGVWAGF ER RDGNKF+VAERP +Q +RNYC ET +
Sbjct: 121 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSERIRDGNKFVVAERPAQQVRRNYCTETAD 180

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLF 216
           SI+EERK RR NAS GFFDE    +S SNLLD LF
Sbjct: 181 SIIEERKIRRQNASNGFFDESGSGESPSNLLDALF 215

[Close]
BLAST of Cp4.1LG08g04360 vs. TrEMBL
Match: A0A067L6D1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02058 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.6e-100
Identity = 180/218 (82.57%), Postives = 197/218 (90.37%), Query Frame = 1 

Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           MG ESY+VVHNIAKRHNVGTLARSATAFGV+E+ILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MGIESYIVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LL+ARNFL+EKDCDICGVEI D A+ VN+HPF +STAFLLGNEGTGLSAKEC ICDFF+Y
Sbjct: 61  LLEARNFLKEKDCDICGVEIADGALPVNEHPFNKSTAFLLGNEGTGLSAKECEICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYG GTASLNVTVAASIVLHHFGVWAGF ER R+GNKFIVAERPVKQ K  YC ETEE
Sbjct: 121 IPQYGCGTASLNVTVAASIVLHHFGVWAGFSERIREGNKFIVAERPVKQAK--YCTETEE 180

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 219
           SI+EERK+R+++AS GFFDE    DS SNLLD LF +E
Sbjct: 181 SIIEERKTRKEHASNGFFDESRNGDSASNLLDALFNDE 216

[Close]
BLAST of Cp4.1LG08g04360 vs. TrEMBL
Match: A0A161ZT46_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022857 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.6e-100
Identity = 178/215 (82.79%), Postives = 193/215 (89.77%), Query Frame = 1 

Query: 4   ESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLD 63
           E YVVVHNIAKRHNVGTLARSATAFGV+E+ILVGRRDFN+FGSHGSTSH RFRHFHSL D
Sbjct: 22  ECYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNSFGSHGSTSHCRFRHFHSLAD 81

Query: 64  ARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIYIPQ 123
           AR+FL+EKDCDICGVEITD+AVAVNQHPF +STAFLLGNEGTGLS+KECAICDFF+YIPQ
Sbjct: 82  ARSFLKEKDCDICGVEITDDAVAVNQHPFTKSTAFLLGNEGTGLSSKECAICDFFVYIPQ 141

Query: 124 YGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIV 183
           YG GTASLNVT+AASIVLHHFGVWAGF ER RDGNKF+VAERPVKQ  RNYC ET E+I+
Sbjct: 142 YGCGTASLNVTIAASIVLHHFGVWAGFSERSRDGNKFVVAERPVKQSGRNYCTETAETII 201

Query: 184 EERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 219
           EERK R++NA  GFFDE    DS SNLLD LF  E
Sbjct: 202 EERKLRKENALNGFFDESVKQDSPSNLLDALFDGE 236

[Close]
BLAST of Cp4.1LG08g04360 vs. TrEMBL
Match: A9PAZ0_POPTR (tRNA/rRNA methyltransferase family protein OS=Populus trichocarpa GN=POPTR_0008s20270g PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.3e-99
Identity = 181/215 (84.19%), Postives = 194/215 (90.23%), Query Frame = 1 

Query: 4   ESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLD 63
           ESYVVVHNIAKRHNVGTLARSATAFGV E+ILVGRRDFN+FGSHGSTSH+ FRHFHSL D
Sbjct: 4   ESYVVVHNIAKRHNVGTLARSATAFGVKELILVGRRDFNSFGSHGSTSHLPFRHFHSLSD 63

Query: 64  ARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIYIPQ 123
           ARNFL+EKDCDICGVEITD+A  VN+HPFKRSTAFLLGNEGTGLS KEC ICDFF+YIPQ
Sbjct: 64  ARNFLKEKDCDICGVEITDSAFPVNEHPFKRSTAFLLGNEGTGLSTKECEICDFFVYIPQ 123

Query: 124 YGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIV 183
           YG GTASLNVTVAASIVLHHFGVWAGF ER RDG+KFIVAERPVKQGK  YC ETEESI+
Sbjct: 124 YGCGTASLNVTVAASIVLHHFGVWAGFSERSRDGHKFIVAERPVKQGK--YCTETEESII 183

Query: 184 EERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 219
           +ERKSRR+NAS GFFDE    +STS+ LDTLF  E
Sbjct: 184 QERKSRRENASNGFFDETRNAESTSSPLDTLFTEE 216

[Close]
BLAST of Cp4.1LG08g04360 vs. TAIR10
Match: AT4G15520.1 (AT4G15520.1 tRNA/rRNA methyltransferase (SpoU) family protein)

HSP 1 Score: 358.2 bits (918), Expect = 3.5e-99
Identity = 172/220 (78.18%), Postives = 199/220 (90.45%), Query Frame = 1 

Query: 2   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSL 61
           GFESYVVVHNIAKRHNVGTLARSATAFGV+E+ILVGRRDFNAFGSHGS SH+RFRHFHSL
Sbjct: 3   GFESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFHSL 62

Query: 62  LDARNFL-QEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 121
           ++ARN+L +EKDCDICGVEI D A AVN+HPFKR+TAFLLGNEG+GLSAKE  ICDFF+Y
Sbjct: 63  IEARNYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFFVY 122

Query: 122 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 181
           IPQYG GTASLNVTVAASIVLHHFGVWAGF ER RDG+KFIVA+RPV+QG+RN+C  TEE
Sbjct: 123 IPQYGCGTASLNVTVAASIVLHHFGVWAGFSERVRDGSKFIVADRPVRQGRRNFCAGTEE 182

Query: 182 SIVEERKSRRDNASKGFFDEGTIDD--STSNLLDTLFINE 219
           S++EERK R+++A  GFFD+   ++  S+S+LLD LF+NE
Sbjct: 183 SVIEERKLRKESAENGFFDDNGNENGSSSSDLLDGLFLNE 222

[Close]
BLAST of Cp4.1LG08g04360 vs. TAIR10
Match: AT4G17610.1 (AT4G17610.1 tRNA/rRNA methyltransferase (SpoU) family protein)

HSP 1 Score: 49.3 bits (116), Expect = 3.5e-06
Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 1 

Query: 67   FLQEKDCD---ICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIYIPQ 126
            FL++K  +   I G+E T N+V+++++ F + T  +LG E  G+      I D  I IPQ
Sbjct: 1765 FLEKKKREGFSILGLEQTANSVSLDKYQFPKKTVLVLGREKEGIPVDIIHILDACIEIPQ 1824

Query: 127  YGVGTASLNVTVAASIVLHHF 145
             GV   SLNV V+ +I L  +
Sbjct: 1825 LGV-VRSLNVHVSGAIALWEY 1844

[Close]
BLAST of Cp4.1LG08g04360 vs. NCBI nr
Match: gi|659076582|ref|XP_008438758.1| (PREDICTED: rRNA methyltransferase 1, mitochondrial [Cucumis melo])

HSP 1 Score: 422.9 bits (1086), Expect = 3.3e-115
Identity = 203/218 (93.12%), Postives = 213/218 (97.71%), Query Frame = 1 

Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           MG ESYVVVHNIAKRHNVGT+ARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDA+ FL+EKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY
Sbjct: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPV+Q KRNYC ETEE
Sbjct: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE 180

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 219
           SI+EERKSRR+NASKGFFDEG IDDSTSNLLDTLFI++
Sbjct: 181 SIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 218

[Close]
BLAST of Cp4.1LG08g04360 vs. NCBI nr
Match: gi|449432771|ref|XP_004134172.1| (PREDICTED: rRNA methyltransferase 1, mitochondrial [Cucumis sativus])

HSP 1 Score: 415.6 bits (1067), Expect = 5.3e-113
Identity = 199/218 (91.28%), Postives = 212/218 (97.25%), Query Frame = 1 

Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           MG ESYVVVHNIAKRHNVGT+ARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDA+ FL+EKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFF+Y
Sbjct: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDG+KFIVAERPV+Q KRNYC ETEE
Sbjct: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGSKFIVAERPVRQVKRNYCTETEE 180

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 219
           SI+EERKSRR+NASKGFFDEG ID+S SNLLDTLFI++
Sbjct: 181 SIMEERKSRRENASKGFFDEGMIDESASNLLDTLFIDQ 218

[Close]
BLAST of Cp4.1LG08g04360 vs. NCBI nr
Match: gi|1012004119|ref|XP_015939488.1| (PREDICTED: putative TrmH family tRNA/rRNA methyltransferase [Arachis duranensis])

HSP 1 Score: 375.2 bits (962), Expect = 7.9e-101
Identity = 178/217 (82.03%), Postives = 201/217 (92.63%), Query Frame = 1 

Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           MGFESYVVVHNIAKRHNVGTLARSATAFGVSE+ILVGRRDFN+FGSHGS++H+RFRHFHS
Sbjct: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSELILVGRRDFNSFGSHGSSAHLRFRHFHS 60

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           L DAR FL+EKD DICGVEIT+NA+ VNQHPFK+STAFLLGNEGTGLSAKEC ICDFF+Y
Sbjct: 61  LHDARQFLKEKDFDICGVEITENAMPVNQHPFKKSTAFLLGNEGTGLSAKECEICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYG GTASLNVTVAASIVLHHFGVWAGF ER RDGNKF+VAERPVKQ +RN+C ETE+
Sbjct: 121 IPQYGGGTASLNVTVAASIVLHHFGVWAGFGERSRDGNKFVVAERPVKQVRRNFCTETED 180

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFIN 218
            IVEERK+RR+NA+ GFFDE   ++S+SN+LD LF++
Sbjct: 181 DIVEERKARRENAANGFFDENENNNSSSNMLDALFVD 217

[Close]
BLAST of Cp4.1LG08g04360 vs. NCBI nr
Match: gi|225432460|ref|XP_002278797.1| (PREDICTED: uncharacterized protein LOC100252797 isoform X1 [Vitis vinifera])

HSP 1 Score: 374.4 bits (960), Expect = 1.4e-100
Identity = 181/215 (84.19%), Postives = 194/215 (90.23%), Query Frame = 1 

Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           M  ESYVVVHNIAKRHNVGTLARSA+A GVSE+ILVGRRDFN+FGSHGSTSH+RFRHFHS
Sbjct: 1   MVVESYVVVHNIAKRHNVGTLARSASALGVSELILVGRRDFNSFGSHGSTSHLRFRHFHS 60

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDAR+FL+EKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLS KEC ICDFF+Y
Sbjct: 61  LLDARHFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSVKECEICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYG GTASLNVTVAASIVLHHFGVWAGF ER RDGNKF+VAERP +Q +RNYC ET +
Sbjct: 121 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSERIRDGNKFVVAERPAQQVRRNYCTETAD 180

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLF 216
           SI+EERK RR NAS GFFDE    +S SNLLD LF
Sbjct: 181 SIIEERKIRRQNASNGFFDESGSGESPSNLLDALF 215

[Close]
BLAST of Cp4.1LG08g04360 vs. NCBI nr
Match: gi|802578494|ref|XP_012069459.1| (PREDICTED: uncharacterized protein LOC105631867 [Jatropha curcas])

HSP 1 Score: 373.6 bits (958), Expect = 2.3e-100
Identity = 180/218 (82.57%), Postives = 197/218 (90.37%), Query Frame = 1 

Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           MG ESY+VVHNIAKRHNVGTLARSATAFGV+E+ILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MGIESYIVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LL+ARNFL+EKDCDICGVEI D A+ VN+HPF +STAFLLGNEGTGLSAKEC ICDFF+Y
Sbjct: 61  LLEARNFLKEKDCDICGVEIADGALPVNEHPFNKSTAFLLGNEGTGLSAKECEICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYG GTASLNVTVAASIVLHHFGVWAGF ER R+GNKFIVAERPVKQ K  YC ETEE
Sbjct: 121 IPQYGCGTASLNVTVAASIVLHHFGVWAGFSERIREGNKFIVAERPVKQAK--YCTETEE 180

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 219
           SI+EERK+R+++AS GFFDE    DS SNLLD LF +E
Sbjct: 181 SIIEERKTRKEHASNGFFDESRNGDSASNLLDALFNDE 216

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g04360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRMHL_STAHJ9.9e-1132.19Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus haemolyticus ... [more]
TRMHL_STAAM2.9e-1030.82Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai... [more]
TRMHL_STAAN2.9e-1030.82Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai... [more]
TRMHL_STAAR2.9e-1030.82Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai... [more]
TRMHL_STAAS2.9e-1030.82Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai... [more]
BLAST of Cp4.1LG08g04360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAH1_CUCSA3.7e-11391.28Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150750 PE=4 SV=1[more]
A5AVL9_VITVI9.4e-10184.19Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02300 PE=4 SV=... [more]
A0A067L6D1_JATCU1.6e-10082.57Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02058 PE=4 SV=1[more]
A0A161ZT46_DAUCA3.6e-10082.79Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022857 PE=4 SV=1[more]
A9PAZ0_POPTR2.3e-9984.19tRNA/rRNA methyltransferase family protein OS=Populus trichocarpa GN=POPTR_0008s... [more]
BLAST of Cp4.1LG08g04360 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15520.13.5e-9978.18 tRNA/rRNA methyltransferase (SpoU) family protein[more]
AT4G17610.13.5e-0637.04 tRNA/rRNA methyltransferase (SpoU) family protein[more]
BLAST of Cp4.1LG08g04360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076582|ref|XP_008438758.1|3.3e-11593.12PREDICTED: rRNA methyltransferase 1, mitochondrial [Cucumis melo][more]
gi|449432771|ref|XP_004134172.1|5.3e-11391.28PREDICTED: rRNA methyltransferase 1, mitochondrial [Cucumis sativus][more]
gi|1012004119|ref|XP_015939488.1|7.9e-10182.03PREDICTED: putative TrmH family tRNA/rRNA methyltransferase [Arachis duranensis][more]
gi|225432460|ref|XP_002278797.1|1.4e-10084.19PREDICTED: uncharacterized protein LOC100252797 isoform X1 [Vitis vinifera][more]
gi|802578494|ref|XP_012069459.1|2.3e-10082.57PREDICTED: uncharacterized protein LOC105631867 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008173RNA methyltransferase activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: INTERPRO
TermDefinition
IPR001537SpoU_MeTrfase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0001510 RNA methylation
biological_process GO:0006396 RNA processing
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g04360.1Cp4.1LG08g04360.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001537tRNA/rRNA methyltransferase, SpoU typePFAMPF00588SpoU_methylasecoord: 6..142
score: 2.2
NoneNo IPR availablePANTHERPTHR12029RNA METHYLTRANSFERASEcoord: 6..169
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g04360Cucsa.253780Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g04360CmaCh06G014470Cucurbita maxima (Rimu)cmacpeB853
Cp4.1LG08g04360CmoCh06G014490Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g04360Cla021684Watermelon (97103) v1cpewmB845
Cp4.1LG08g04360Csa3G150750Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g04360MELO3C006586Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g04360ClCG05G005600Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g04360CSPI03G13710Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g04360Lsi05G014780Bottle gourd (USVL1VR-Ls)cpelsiB718
Cp4.1LG08g04360MELO3C006586.2Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g04360CsaV3_3G013940Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g04360Bhi01G000653Wax gourdcpewgoB1110
Cp4.1LG08g04360CsGy3G013860Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g04360Carg20156Silver-seed gourdcarcpeB1165
Cp4.1LG08g04360Carg17385Silver-seed gourdcarcpeB0861
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g04360Melon (DHL92) v3.6.1cpemedB933
Cp4.1LG08g04360Silver-seed gourdcarcpeB0109
Cp4.1LG08g04360Silver-seed gourdcarcpeB0456
Cp4.1LG08g04360Cucumber (Chinese Long) v3cpecucB1073
Cp4.1LG08g04360Cucumber (Chinese Long) v3cpecucB1081
Cp4.1LG08g04360Wax gourdcpewgoB1096
Cp4.1LG08g04360Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG08g04360Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG08g04360Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG08g04360Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g04360Cucurbita maxima (Rimu)cmacpeB412
Cp4.1LG08g04360Cucurbita maxima (Rimu)cmacpeB931
Cp4.1LG08g04360Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g04360Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g04360Cucurbita moschata (Rifu)cmocpeB866
Cp4.1LG08g04360Bottle gourd (USVL1VR-Ls)cpelsiB697
Cp4.1LG08g04360Watermelon (Charleston Gray)cpewcgB788
Cp4.1LG08g04360Watermelon (97103) v1cpewmB853
Cp4.1LG08g04360Melon (DHL92) v3.5.1cpemeB793
Cp4.1LG08g04360Cucumber (Gy14) v2cgybcpeB885
Cp4.1LG08g04360Cucumber (Gy14) v2cgybcpeB894
Cp4.1LG08g04360Cucumber (Gy14) v2cgybcpeB989