Carg17385 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17385
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	tRNA/rRNA methyltransferase
Location	Cucurbita_argyrosperma_scaffold_092 : 355466 .. 359639 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATACTAAATTAAAATTAGCGTTTAACGGTAGTGCGAACAGCCGCGAAACGACACCGTATTGAAAAGAATTCATCAGACGCCAGGGCCAGGCTGAACTGTGAACCGCTCCTTCTTCTTCGATCCGCCGCCAGAACTGAGTTGCAGGCTCTGTCAAAACCCTCAATCCGTAAACCCCATCACTTTCTCTTCAATCATTTCATCGCCATTGAATTCGAAATGGGGTTCGAAAGCTATGTCGTCGTACATAACATAGCCAAAAGGCACAACGTTGGCACATTGGCCCGAAGCGCCACCGCGTTCGGTGTATCGGAGGTCATCCTCGTCGGCCGTCGGGACTTCAACGCCTTCGGTAGCCATGGTTCCACTTCTCACGTCCGGTTCCGTCATTTTCATTCCCTTCTCGACGCCCGAAATTTCCTTCAGGTTCTTCCCTCTTTCTTTCTTCCCTTCATCGGTCTCGATTAGGTTATGGGTTTGTTTTGAAATTTGAATTTTTTTCCATCTGTGTCTGTAGGAGAAGGACTGTGATATATGTGGCGTGGAGATCACTGATAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTCGGCAACGAGGTTGGTTTTTGTGTTGGAATTCCATTTTTTATTGCATTTATTAATCACCATATCCTGCTGCCAGTTAATAAGTTCTTCTCTAATTCCATTATACATAGGACGTGAAGAGCTTATTATCTCCCATTAATTCTTTCATTTTTCTCAATTACAACTCGGTTTCTTACTCACGTTGTGAGATCCCGCATCGATTGGGGAGGATAACAAAACACACTTTATAAGGGTGTGGAAACCTTTCCCTAACAGACACGTTTTAAATCCTTGAGGAGAAGCCCAAAAGGGAAACCCCAAAGAAGACAATATCTACTAGCGGTGGACATGGGCCATTACAAATGATATGAGATCTAGACACCGGGCGATATGCTAGCAAGGAGGCTAAGCCCCTGAAGGGGGTGGACATAAGATGATGTGCCAGAAAGGACGCTGGGCCTCGAAAGGCGTGGATTGAGGGATTCCACATCAATTGGAGAAGGGAACAAGTGTTGGCGAGGATGCTGGGCCCTGAAAGGGATGGATTGTGAGATCCCACATCGGTTGGGGGTTGGAGAGGAGAATGAAACACCCTTTATAAGGGTGTGGAAATCTTTCCCTAGCAGACACGTTTTAAAAATCTTGAGGAGAATCTCGAAAAGGAAAGCCCAAAAGCTCAAAGAAGACAATATCTGCTAGTAGTGGAGTTTAGCGGTTACACGTATACTTAAAATTTGTGAGATTAGTTAGGAGGCCATGAGTATAATGCAAAGAGTGAACTCCGATTCCTTGATGAAAAGAATAAACGATAATTACTTAAAGTTCCTCTGGCAATCATAGTTTCTGTGATGGATTATTCTTCCATTTCTTGATGTGATGTCATTAGGATTTAATATGTCCTTTTAGATCTCTTGCCTTTTCTGTTAAGTCCACGTCTCTATGATGTTCTAGGCATTGTGAGTTAGTTAGTAGCATGATCATCAAGATTGAATTGGATCAGAATCATTTGGGAATAATATTTTGATACAGTAATTCATCAAGGAGACACCCTTTTGATGTTTATATGCATATGATACTTCTAGGGAACAGGGCTTTCTGCTAAAGAGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTCGGCACCGCTTCTTTGAATGTCACTGTAGCTGCTTCAATTGTCCTACATCATTTTGGTGGTAATTAATACTCAGAACTGTTGCATTTTCATCTCCCCCTTTTGAGTTTCTTTTAAATACATGTCTAATCTATATCACCTATAAGAATTACCAGTCTCTCTTAATATTTTCGGTTTGATACGTTTGGTTTTTTACCATGTAAAATCATGAGTACTGTAAAATTACGTGATCGATGAAAGGACTTTAGGAAGAAATGCATATATATCTTAAAAGTATGTAAGGAGGGGCAGTTATCTGATCTGATTATTTTGATCCCTTTCTCTGAGTTCTGAATCAGTTCATTATGGGAAATGATCCCTTCAAGCTGAAACTTAGGAAACTGTGTCCTAGGAATAAGTATGGCTTGGTTGAATCAAATGATGTTGCAGTTTGTAATAGCACTCATGCTTGATATTAATGATCATCTTGGATTGATAAATTATCCTCTTATGGTCATCAAGTTGTAATATCCCAAGCTCACCGCTAGCAGATATTGTTCTCTTTGGGCTTTTTCTTTCGGTCTTCCCCTCAAGGTTTTTAAAACGCATCTACTAGGGAGAGGTTTCCACGCCCTTATAAAGAATACTTTGTTCTCTTCCCTAACCGATGTGGGATCTCACAATCCACCCCCTTCAGGGCCTAGCATCCTTGCTAGCACTCGTTCCCTTCTCCAATCGATGTGGGATCTTCCAATCCACCCCCTTTCGGGACCCAGCGTCCTTTCTGGCATATCGTCTTGTGTCCACCCCCTTTGGGGGCTTAGTCTCCTTGCTGGCACATCGCCCGGTGTCTAGCTCTCATACCATTTGTAACGGCACAAGTCCACCGCTAGTACATATTGTTCTCTTTGGGCTTCCCCTCGTCCTTATAAAGAATACTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATCCACTCTTTTTTGGGGCCCAGCATTCTTGCTGGCACACTGCCTTGTGTCCACCCCCTTTCGGGGTTTAGTCTCCTTGTTGGCACATCGCCCATTGTCTAGCTTTAATACCATTTGTAAAACCCAAGCCCACCGCTAGCAGATATTGTTCTCTTTGGGCTTTCCCTTTCGGACTTCCCTTCAAGGTTTTTAAAACGCAATTGTTAGGGAGAGGTTTCCACACCCTTGTAAACAATGTTTCGTTCTTCTCCCAACTAATGTGGGATCTCACACATGCGTTTCTATAATTATTATGTTTTTTCAACTTGCAATTTGAGAAAATTGTTCGTCTAATTTTTTACATGATATTGAAACAACTCGAGCATGTTGGGAGCTGATCCATTTTTTTTCCCTCTTGTCTTTAAGAACAGTGATATGGTAGCTTGTTATTATTGGATTTATGAGCCCAAAGGAAGAACAAGTTAGTTTGTTTTGAAAAGATACGTCACCTATGAGAACAAACTAAAGGAAATTGAAGTTCTTCAAAAATATGATATTATTGGATTTGAGTCTTTTCAAAAACAGCTTCCAGATTTGGCTACATCTCCTGTTACTATATTAGGGTTCTTTCTTGTGTGTTTATATTGGAGGTTTAAGTGAAAATCAGGTTGGTTATGCCTTATTTGATGAACTGGAAATGATACTTGTCCCCTTTTCTAGACATTATTGACCTCTCATCAACCATGTTTTTCAGTTTGGGCAGGCTTTCCCGAACGATGTCGTGATGGTAACAAGTTTATAGTGGCCGAAAGACCAGTAAAGCAAGGCAAGCGGAATTATTGCCCTGAAACAGAAGAATCTATTGTTGAAGAGCGAAAGTCCAGGCGGGATAATGCTTCGAAAGGCTTCTTTGACGAGGGAACGATCGATGATTCGACATCCAACCTTCTCGATACATTGTTTATTAACGAATGAACGGAGTTGAAGCTGGGAGTCGTCATTCGACATCCAACCTTCTTGATACACAACCCACATCAGACTGCATGATTATTGTAGCTCATTGCTGGAAGCTGTTCTGGAAAGAAAGGAACTCCTTCTCCTTTGTCTTTATCTCTTTTTGTTCTTAGATTTCGATATTCCTAGAACGTTCGTGCGGTTATATTTAGTTAATTAGCTTGATGACTTACTCGGTCGTTTCGTCGAAAGGTACTTCCGATCACCACATTGTTAAGGCGAGTTTGTAAAAATAGGACAGAAAGCAAGCAGAAGGCAGAAGGATTTAAAGCAAAGGGTTGCAAGGTTGACTCAAACATGTTCTTCATTAGGGATGTCATTGATACATACTTAGATTAGTTATACAAAAGTTATATCAGTTTGTACCATTTGGAAATTTGGGCTAAATCTAATCGATAGTCATTAAATTGTTTTTCTACGTGCAATAGGTATTTTTCATAACAAAACATTTAGAATTATGTACGTTGAACTGGAATGTGTACTCTCCGTACAAG

mRNA sequence

TAAATACTAAATTAAAATTAGCGTTTAACGGTAGTGCGAACAGCCGCGAAACGACACCGTATTGAAAAGAATTCATCAGACGCCAGGGCCAGGCTGAACTGTGAACCGCTCCTTCTTCTTCGATCCGCCGCCAGAACTGAGTTGCAGGCTCTGTCAAAACCCTCAATCCGTAAACCCCATCACTTTCTCTTCAATCATTTCATCGCCATTGAATTCGAAATGGGGTTCGAAAGCTATGTCGTCGTACATAACATAGCCAAAAGGCACAACGTTGGCACATTGGCCCGAAGCGCCACCGCGTTCGGTGTATCGGAGGTCATCCTCGTCGGCCGTCGGGACTTCAACGCCTTCGGTAGCCATGGTTCCACTTCTCACGTCCGGTTCCGTCATTTTCATTCCCTTCTCGACGCCCGAAATTTCCTTCAGGAGAAGGACTGTGATATATGTGGCGTGGAGATCACTGATAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTCGGCAACGAGGGAACAGGGCTTTCTGCTAAAGAGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTCGGCACCGCTTCTTTGAATGTCACTGTAGCTGCTTCAATTGTCCTACATCATTTTGGTGTTTGGGCAGGCTTTCCCGAACGATGTCGTGATGGTAACAAGTTTATAGTGGCCGAAAGACCAGTAAAGCAAGGCAAGCGGAATTATTGCCCTGAAACAGAAGAATCTATTGTTGAAGAGCGAAAGTCCAGGCGGGATAATGCTTCGAAAGGCTTCTTTGACGAGGGAACGATCGATGATTCGACATCCAACCTTCTCGATACATTGTTTATTAACGAATGAACGGAGTTGAAGCTGGGAGTCGTCATTCGACATCCAACCTTCTTGATACACAACCCACATCAGACTGCATGATTATTGTAGCTCATTGCTGGAAGCTGTTCTGGAAAGAAAGGAACTCCTTCTCCTTTGTCTTTATCTCTTTTTGTTCTTAGATTTCGATATTCCTAGAACGTTCGTGCGGTTATATTTAGTTAATTAGCTTGATGACTTACTCGGTCGTTTCGTCGAAAGGTACTTCCGATCACCACATTGTTAAGGCGAGTTTGTAAAAATAGGACAGAAAGCAAGCAGAAGGCAGAAGGATTTAAAGCAAAGGGTTGCAAGGTTGACTCAAACATGTTCTTCATTAGGGATGTCATTGATACATACTTAGATTAGTTATACAAAAGTTATATCAGTTTGTACCATTTGGAAATTTGGGCTAAATCTAATCGATAGTCATTAAATTGTTTTTCTACGTGCAATAGGTATTTTTCATAACAAAACATTTAGAATTATGTACGTTGAACTGGAATGTGTACTCTCCGTACAAG

Coding sequence (CDS)

ATGGGGTTCGAAAGCTATGTCGTCGTACATAACATAGCCAAAAGGCACAACGTTGGCACATTGGCCCGAAGCGCCACCGCGTTCGGTGTATCGGAGGTCATCCTCGTCGGCCGTCGGGACTTCAACGCCTTCGGTAGCCATGGTTCCACTTCTCACGTCCGGTTCCGTCATTTTCATTCCCTTCTCGACGCCCGAAATTTCCTTCAGGAGAAGGACTGTGATATATGTGGCGTGGAGATCACTGATAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTCGGCAACGAGGGAACAGGGCTTTCTGCTAAAGAGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTCGGCACCGCTTCTTTGAATGTCACTGTAGCTGCTTCAATTGTCCTACATCATTTTGGTGTTTGGGCAGGCTTTCCCGAACGATGTCGTGATGGTAACAAGTTTATAGTGGCCGAAAGACCAGTAAAGCAAGGCAAGCGGAATTATTGCCCTGAAACAGAAGAATCTATTGTTGAAGAGCGAAAGTCCAGGCGGGATAATGCTTCGAAAGGCTTCTTTGACGAGGGAACGATCGATGATTCGACATCCAACCTTCTCGATACATTGTTTATTAACGAATGA

Protein sequence

MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEESIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE

Homology

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BLAST of Carg17385 vs. NCBI nr
Match: XP_022953920.1 (uncharacterized protein LOC111456233 isoform X2 [Cucurbita moschata])

HSP 1 Score: 448.0 bits (1151), Expect = 1.9e-122
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS
Sbjct: 86  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 145

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY
Sbjct: 146 LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 205

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE
Sbjct: 206 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 265

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 219
           SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE
Sbjct: 266 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 303

[Close]

BLAST of Carg17385 vs. NCBI nr
Match: XP_022953849.1 (uncharacterized protein LOC111456233 isoform X1 [Cucurbita moschata])

HSP 1 Score: 448.0 bits (1151), Expect = 1.9e-122
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS
Sbjct: 93  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 152

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY
Sbjct: 153 LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 212

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE
Sbjct: 213 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 272

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 219
           SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE
Sbjct: 273 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 310

[Close]

BLAST of Carg17385 vs. NCBI nr
Match: XP_022973638.1 (uncharacterized protein LOC111472230 isoform X2 [Cucurbita maxima])

HSP 1 Score: 448.0 bits (1151), Expect = 1.9e-122
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS
Sbjct: 108 MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 167

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY
Sbjct: 168 LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 227

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE
Sbjct: 228 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 287

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 219
           SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE
Sbjct: 288 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 325

[Close]

BLAST of Carg17385 vs. NCBI nr
Match: XP_023539188.1 (uncharacterized protein LOC111799908 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 448.0 bits (1151), Expect = 1.9e-122
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS
Sbjct: 99  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 158

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY
Sbjct: 159 LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 218

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE
Sbjct: 219 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 278

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 219
           SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE
Sbjct: 279 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 316

[Close]

BLAST of Carg17385 vs. NCBI nr
Match: XP_022973637.1 (uncharacterized protein LOC111472230 isoform X1 [Cucurbita maxima])

HSP 1 Score: 438.3 bits (1126), Expect = 1.5e-119
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS
Sbjct: 108 MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 167

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY
Sbjct: 168 LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 227

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE
Sbjct: 228 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 287

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDT 214
           SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDT
Sbjct: 288 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDT 320

[Close]

BLAST of Carg17385 vs. TAIR10
Match: AT4G15520.1 (tRNA/rRNA methyltransferase (SpoU) family protein)

HSP 1 Score: 358.2 bits (918), Expect = 3.5e-99
Identity = 172/220 (78.18%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 2   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSL 61
           GFESYVVVHNIAKRHNVGTLARSATAFGV+E+ILVGRRDFNAFGSHGS SH+RFRHFHSL
Sbjct: 3   GFESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFHSL 62

Query: 62  LDARNFL-QEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 121
           ++ARN+L +EKDCDICGVEI D A AVN+HPFKR+TAFLLGNEG+GLSAKE  ICDFF+Y
Sbjct: 63  IEARNYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFFVY 122

Query: 122 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 181
           IPQYG GTASLNVTVAASIVLHHFGVWAGF ER RDG+KFIVA+RPV+QG+RN+C  TEE
Sbjct: 123 IPQYGCGTASLNVTVAASIVLHHFGVWAGFSERVRDGSKFIVADRPVRQGRRNFCAGTEE 182

Query: 182 SIVEERKSRRDNASKGFFDEGTIDD--STSNLLDTLFINE 219
           S++EERK R+++A  GFFD+   ++  S+S+LLD LF+NE
Sbjct: 183 SVIEERKLRKESAENGFFDDNGNENGSSSSDLLDGLFLNE 222

[Close]

BLAST of Carg17385 vs. TAIR10
Match: AT5G15390.1 (tRNA/rRNA methyltransferase (SpoU) family protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07
Identity = 47/193 (24.35%), Postives = 81/193 (41.97%), Query Frame = 0


Query: 7   VVVHNIAKRHNVGTLARSATAFGVSEVILVG-----RRDFNAFGSHGSTSHVRFRHFHSL 66
           +VV  ++   N+    RSA A G+  V +V      R + N   S G+   +    + + 
Sbjct: 157 LVVEGLSDFGNISAAFRSADALGIQSVHVVSCDSSKRYNGNRHVSMGAEKWLDIEFWDTP 216

Query: 67  LDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIYI 126
            +    L+ +   I    +  + V++    +   TA ++GNEG G+S +   + D    I
Sbjct: 217 KECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTAIVVGNEGRGISDEALELSDLRCSI 276

Query: 127 PQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEES 186
           P  G+   S NV+VAA I++HH                  V++R  + G      E E+ 
Sbjct: 277 PMNGM-VDSFNVSVAAGILMHH-----------------AVSDRTTRLGSHGDLSEAEKE 331

Query: 187 IVEERKSRRDNAS 195
           I+    S R + S
Sbjct: 337 ILMAEFSLRHSRS 331

[Close]

BLAST of Carg17385 vs. Swiss-Prot
Match: sp|Q4L3J1|TRMHL_STAHJ (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=SH2477 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10
Identity = 47/146 (32.19%), Postives = 71/146 (48.63%), Query Frame = 0


Query: 2   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFR 61
           G  + V++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV   
Sbjct: 93  GLSTVVILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVM 152

Query: 62  HFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L    + L+E    + G E  DNA            A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKEHGYWVAGAE-ADNATDYRDMAADMPLAIVIGSEGQGMSRLVKDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]

BLAST of Carg17385 vs. Swiss-Prot
Match: sp|Q99W72|TRMHL_STAAM (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=SAV0531 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-10
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 0


Query: 2   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFR 61
           G  + +++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L    + L++    + G E  +NA          S A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]

BLAST of Carg17385 vs. Swiss-Prot
Match: sp|Q7A794|TRMHL_STAAN (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain N315) OX=158879 GN=SA0490 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-10
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 0


Query: 2   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFR 61
           G  + +++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L    + L++    + G E  +NA          S A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]

BLAST of Carg17385 vs. Swiss-Prot
Match: sp|Q6GJD7|TRMHL_STAAR (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0535 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-10
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 0


Query: 2   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFR 61
           G  + +++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L    + L++    + G E  +NA          S A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]

BLAST of Carg17385 vs. Swiss-Prot
Match: sp|Q6GBV6|TRMHL_STAAS (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0489 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-10
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 0


Query: 2   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFN-----AFGSHGSTSHVRFR 61
           G  + +++  +   HN+G++ R+A A GV  VI+  RR        A  S G+  HV   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L    + L++    + G E  +NA          S A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]

BLAST of Carg17385 vs. TrEMBL
Match: tr|A0A1S3AXA1|A0A1S3AXA1_CUCME (putative TrmH family tRNA/rRNA methyltransferase OS=Cucumis melo OX=3656 GN=LOC103483771 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 4.3e-115
Identity = 203/218 (93.12%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           MG ESYVVVHNIAKRHNVGT+ARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDA+ FL+EKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY
Sbjct: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPV+Q KRNYC ETEE
Sbjct: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE 180

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 219
           SI+EERKSRR+NASKGFFDEG IDDSTSNLLDTLFI++
Sbjct: 181 SIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 218

[Close]

BLAST of Carg17385 vs. TrEMBL
Match: tr|A0A0A0LAH1|A0A0A0LAH1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150750 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 6.8e-113
Identity = 199/218 (91.28%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           MG ESYVVVHNIAKRHNVGT+ARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDA+ FL+EKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFF+Y
Sbjct: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDG+KFIVAERPV+Q KRNYC ETEE
Sbjct: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGSKFIVAERPVRQVKRNYCTETEE 180

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 219
           SI+EERKSRR+NASKGFFDEG ID+S SNLLDTLFI++
Sbjct: 181 SIMEERKSRRENASKGFFDEGMIDESASNLLDTLFIDQ 218

[Close]

BLAST of Carg17385 vs. TrEMBL
Match: tr|A0A2I4F315|A0A2I4F315_9ROSI (uncharacterized protein LOC108995036 OS=Juglans regia OX=51240 GN=LOC108995036 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 8.3e-103
Identity = 182/215 (84.65%), Postives = 196/215 (91.16%), Query Frame = 0


Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           M  E YVVVHNIAKRHNVGTLARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MSIECYVVVHNIAKRHNVGTLARSATAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           L DAR FL+EKDCDICGVEITD A+AVNQHPF +STAFLLGNEGTGLSAKEC ICDFF+Y
Sbjct: 61  LPDARQFLKEKDCDICGVEITDTAMAVNQHPFNKSTAFLLGNEGTGLSAKECEICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYG GTASLNVTVAASIVLHHFGVWAGFPER RDGNK++VAERPVKQG+RNYC ET +
Sbjct: 121 IPQYGFGTASLNVTVAASIVLHHFGVWAGFPERTRDGNKYVVAERPVKQGRRNYCAETAD 180

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLF 216
           +I+EERKSRR+NAS GFFDE    +S SNLLD LF
Sbjct: 181 TIIEERKSRRENASNGFFDESGNSNSASNLLDALF 215

[Close]

BLAST of Carg17385 vs. TrEMBL
Match: tr|A0A2P5FX17|A0A2P5FX17_9ROSA (tRNA/rRNA methyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_021300 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 5.4e-102
Identity = 181/215 (84.19%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 60
           M  ESYVVVHNIAKRHNVGTLARSA+AFGVSE+ILVGRRDFN+FGSHGSTSH+RFRHFHS
Sbjct: 1   MVVESYVVVHNIAKRHNVGTLARSASAFGVSELILVGRRDFNSFGSHGSTSHLRFRHFHS 60

Query: 61  LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDAR+FL+E+DCDICGVEITD A+AVN HPFK+STAFLLGNEGTGLSAKEC ICDFF+Y
Sbjct: 61  LLDARHFLKERDCDICGVEITDGAMAVNHHPFKKSTAFLLGNEGTGLSAKECEICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEE 180
           IPQYG GTASLNVTVAASIVLHHFGVWAGFPER RDGNKFIVAE+P KQGKRNYC ET +
Sbjct: 121 IPQYGGGTASLNVTVAASIVLHHFGVWAGFPERTRDGNKFIVAEKPEKQGKRNYCAETAD 180

Query: 181 SIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLF 216
           +I+EER+SRR+NAS GFFDE    +S+SNLLD LF
Sbjct: 181 AIIEERRSRRENASNGFFDESENGNSSSNLLDALF 215

[Close]

BLAST of Carg17385 vs. TrEMBL
Match: tr|A0A2R6RV82|A0A2R6RV82_ACTCH (tRNA (Guanosine(18)-2'-O)-methyltransferase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04321 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 5.4e-102
Identity = 184/214 (85.98%), Postives = 195/214 (91.12%), Query Frame = 0


Query: 2   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHSL 61
           GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSH+RFRHFHSL
Sbjct: 6   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHLRFRHFHSL 65

Query: 62  LDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIYI 121
            DAR FL+E+DCDICGVEITDNAVAVNQHPFK+STAFLLGNEGTGLSAKEC ICDFF+YI
Sbjct: 66  SDARLFLKERDCDICGVEITDNAVAVNQHPFKKSTAFLLGNEGTGLSAKECEICDFFVYI 125

Query: 122 PQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVKQGKRNYCPETEES 181
           PQYG GTASLNVTVAASIVLHHFGVWAGF ER RDGNKFIVAERPV Q +RNYC E  ++
Sbjct: 126 PQYGCGTASLNVTVAASIVLHHFGVWAGFAERSRDGNKFIVAERPVNQVRRNYCAEMSDA 185

Query: 182 IVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLF 216
           I+EERK +R+NAS GFFDE    DS SNLLD LF
Sbjct: 186 IIEERKLKRENASNGFFDESGKGDSPSNLLDGLF 219

The following BLAST results are available for this feature:

BLAST of Carg17385 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953920.1	1.9e-122	100.00	uncharacterized protein LOC111456233 isoform X2 [Cucurbita moschata]	[more]
XP_022953849.1	1.9e-122	100.00	uncharacterized protein LOC111456233 isoform X1 [Cucurbita moschata]	[more]
XP_022973638.1	1.9e-122	100.00	uncharacterized protein LOC111472230 isoform X2 [Cucurbita maxima]	[more]
XP_023539188.1	1.9e-122	100.00	uncharacterized protein LOC111799908 [Cucurbita pepo subsp. pepo]	[more]
XP_022973637.1	1.5e-119	100.00	uncharacterized protein LOC111472230 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg17385 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G15520.1	3.5e-99	78.18	tRNA/rRNA methyltransferase (SpoU) family protein	[more]
AT5G15390.1	1.1e-07	24.35	tRNA/rRNA methyltransferase (SpoU) family protein	[more]

BLAST of Carg17385 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q4L3J1\|TRMHL_STAHJ	1.0e-10	32.19	Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus haemolyticus ...	[more]
sp\|Q99W72\|TRMHL_STAAM	2.9e-10	30.82	Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai...	[more]
sp\|Q7A794\|TRMHL_STAAN	2.9e-10	30.82	Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai...	[more]
sp\|Q6GJD7\|TRMHL_STAAR	2.9e-10	30.82	Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai...	[more]
sp\|Q6GBV6\|TRMHL_STAAS	2.9e-10	30.82	Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai...	[more]

BLAST of Carg17385 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AXA1\|A0A1S3AXA1_CUCME	4.3e-115	93.12	putative TrmH family tRNA/rRNA methyltransferase OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0LAH1\|A0A0A0LAH1_CUCSA	6.8e-113	91.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150750 PE=4 SV=1	[more]
tr\|A0A2I4F315\|A0A2I4F315_9ROSI	8.3e-103	84.65	uncharacterized protein LOC108995036 OS=Juglans regia OX=51240 GN=LOC108995036 P...	[more]
tr\|A0A2P5FX17\|A0A2P5FX17_9ROSA	5.4e-102	84.19	tRNA/rRNA methyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_021300 PE...	[more]
tr\|A0A2R6RV82\|A0A2R6RV82_ACTCH	5.4e-102	85.98	tRNA (Guanosine(18)-2'-O)-methyltransferase OS=Actinidia chinensis var. chinensi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0008173	RNA methyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006396	RNA processing

Vocabulary: **INTERPRO**
Term	Definition
IPR029028	Alpha/beta_knot_MTases
IPR001537	SpoU_MeTrfase
IPR029026	tRNA_m1G_MTases_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008173	RNA methyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17385-RA	Carg17385-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	G3DSA:3.40.1280.10		coord: 3..148 e-value: 1.5E-35 score: 124.3
IPR001537	tRNA/rRNA methyltransferase, SpoU type	PFAM	PF00588	SpoU_methylase	coord: 6..142 e-value: 2.0E-28 score: 99.2
None	No IPR available	PANTHER	PTHR43191:SF1	OBP33PEP LIKE PROTEIN	coord: 3..155
None	No IPR available	PANTHER	PTHR43191	FAMILY NOT NAMED	coord: 3..155
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	SSF75217	alpha/beta knot	coord: 5..145

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17385	Cla021684	Watermelon (97103) v1	carwmB0603
Carg17385	Csa3G150750	Cucumber (Chinese Long) v2	carcuB0633
Carg17385	MELO3C006586	Melon (DHL92) v3.5.1	carmeB0610
Carg17385	ClCG05G005600	Watermelon (Charleston Gray)	carwcgB0588
Carg17385	CSPI03G13710	Wild cucumber (PI 183967)	carcpiB0639
Carg17385	Cucsa.253780	Cucumber (Gy14) v1	carcgyB0681
Carg17385	CmaCh06G014470	Cucurbita maxima (Rimu)	carcmaB0849
Carg17385	CmoCh06G014490	Cucurbita moschata (Rifu)	carcmoB0825
Carg17385	Lsi05G014780	Bottle gourd (USVL1VR-Ls)	carlsiB552
Carg17385	Cp4.1LG08g04360	Cucurbita pepo (Zucchini)	carcpeB0861
Carg17385	CsGy3G013860	Cucumber (Gy14) v2	carcgybB0605
Carg17385	MELO3C006586.2	Melon (DHL92) v3.6.1	carmedB0616
Carg17385	CsaV3_3G013940	Cucumber (Chinese Long) v3	carcucB0640
Carg17385	Cla97C05G087000	Watermelon (97103) v2	carwmbB0631
Carg17385	Bhi01G000653	Wax gourd	carwgoB0722

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17385	Carg20156	Silver-seed gourd	carcarB544

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17385	Silver-seed gourd	carcarB083
Carg17385	Silver-seed gourd	carcarB347
Carg17385	Cucumber (Gy14) v2	carcgybB0606
Carg17385	Cucumber (Gy14) v1	carcgyB0682
Carg17385	Cucurbita maxima (Rimu)	carcmaB0847
Carg17385	Cucurbita maxima (Rimu)	carcmaB0848
Carg17385	Cucurbita maxima (Rimu)	carcmaB0850
Carg17385	Cucurbita moschata (Rifu)	carcmoB0823
Carg17385	Cucurbita moschata (Rifu)	carcmoB0824
Carg17385	Cucurbita moschata (Rifu)	carcmoB0826
Carg17385	Cucurbita pepo (Zucchini)	carcpeB0857
Carg17385	Cucurbita pepo (Zucchini)	carcpeB0858
Carg17385	Cucurbita pepo (Zucchini)	carcpeB0860
Carg17385	Wild cucumber (PI 183967)	carcpiB0640
Carg17385	Cucumber (Chinese Long) v2	carcuB0634
Carg17385	Cucumber (Chinese Long) v3	carcucB0641
Carg17385	Bottle gourd (USVL1VR-Ls)	carlsiB550
Carg17385	Melon (DHL92) v3.5.1	carmeB0609
Carg17385	Melon (DHL92) v3.6.1	carmedB0615
Carg17385	Watermelon (Charleston Gray)	carwcgB0589
Carg17385	Watermelon (97103) v1	carwmB0604
Carg17385	Watermelon (97103) v2	carwmbB0632
Carg17385	Wax gourd	carwgoB0719