MELO3C006586.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C006586.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptiontRNA/rRNA methyltransferase family protein
Locationchr06 : 4382369 .. 4384470 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAAAAGTAAAAATTACAGAAAAGTTTAGATTAATAATTAAATTAAATTAAATCTACGAAACAAGGAACAGTGAACCGCTCCTTCTTCGATCTGCGGCCATAGTTGAGTTGCAAGCTTTGTCAAAAACCCTAAAATCCCTAAACCCCCTTCACTTCATTTTCAATCAATTCATTTCCATTGAATTTGGAATGGGGATCGAAAGTTACGTTGTGGTGCATAACATAGCCAAAAGGCACAACGTTGGCACCATGGCCCGAAGCGCCACCGCCTTTGGCGTCTCCGAACTCATCCTCGTCGGCCGTCGGGACTTCAACGCCTTTGGTAGCCATGGTTCTACTTCTCATATCCGCTTCCGCCATTTTCACTCCCTTCTCGACGCTCAAACTTTCCTCAAGGTTTTGTTTTCTTTCTTTCTTTCTTCCCTTTCGTAGTAGTGTAATCATGGGTTTGTTTTTGAATTTTGAATTTCGTTCTCCGGTTCTGTAGGAGAAGGATTGCGATATATGTGGCGTGGAGATCACTGACAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTTGGAAACGAGGTTGGTTGTTCGTTTTAATTTTATTGGCTTTTCATTGATAGTGGTCTCTATATTCTTCTGTTGGAATTCCCTTGTTTGATCTGTCCTTATCTATTTCCATGGAATTTCTGTACGCTGTAACTCATAGTGTCGAATTGATAGGGTTGTTTTCTATATGCTGTAGTCGGTTAACAAGTTCCTTCCTAATTCAGTTGATACTTATGACTTAAGAACTTTTTATCTCCTTGAGTTGATCTTGAGGTGGGCAAAACATCCGCGAGACTAGTGGGGTTGGCCATGAGTTATATAATGTTAGGAATGGGCTTCCCTAGCATGGTAAAAAAATAATAACCACTTGATGTTTCTCTAGCAATAATGTTTGCCATAATGCTAATGCAGTATTTTTCCATTTTTGCAATGATGAAATTAGGACTTGATATGGCTGGCATTGTAGATCTCTTGCTTTATTGTAGGATCCATGTCTCCCTGATGCTTTCAGCATTGAGATTAGTGGCATGGTCATCTGTTGTCTGGACCGAATTGGATCAACATCACTTGGAAATTAATTTGACATTAGTTTCAGCTTTGGGTCACCCTTTTGATGGTTATATGCACGTTGTTTTTAGGGAACAGGGCTTTCTGCTAAAGAGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTGGGCACTGCGTCTTTGAATGTAACTGTAGCTGCTTCCATTGTCCTACATCATTTTGGTGGTAATTAATCCAGACCTTTGCATTTTGATCTCCCTCTTTTGAGTTTCTTTTGCGTACATGTCTAGTGTACATCAACTGTAAGAGCTGCGAGTCTCTTAATATTGCTCATCCATACTTTTGGTTTTTACCAAGCAAAACTGTGAGTACTGTAAAATTATGAAATCTATGAAAGGAGAACTACAAGAAGAAACACACATATATCTTAGAAGTTGGAACTTAGAAGAACAGTTGTTTGATCTAATCATTTTTCCTATTTCTCCCGAGTCTTGAATCAATTCTTCATACTGGAAAGTGATCCCTTCAAGCTTAAACTAAGGAAAGTGTGTCCTAGGAATAACTATGGCTGAGTTGAATTGAATAATGTGGCAGTTTGTACTGGCGCACATAGTTGATTTTGACGATGACCATCTAGGTAGATGGATCCTCTCACATGTTTCTAGTGTGCATATATTGAGATTTAAGTGAAAACCGAGTAAGTTATGTCTTATTTGATTTAATGGAAGTGATACTTGTCTATTTCTCTAGATGTAACTTTAAATTTTCATACTGTATTTTTCAGTTTGGGCAGGATTTCCCGAAAGATGTCGCGACGGTAACAAATTTATAGTGGCTGAAAGACCAGTCAGACAGGTCAAGCGGAATTATTGTGCTGAAACAGAAGAATCCATTATTGAAGAGCGTAAATCCAGGAGGGAGAATGCTTCTAAAGGCTTCTTTGATGAAGGGATGATTGATGATTCTACATCCAACCTTCTTGATACATTGTTTATTGATCAATGA

mRNA sequence

TGAAAAAGTAAAAATTACAGAAAAGTTTAGATTAATAATTAAATTAAATTAAATCTACGAAACAAGGAACAGTGAACCGCTCCTTCTTCGATCTGCGGCCATAGTTGAGTTGCAAGCTTTGTCAAAAACCCTAAAATCCCTAAACCCCCTTCACTTCATTTTCAATCAATTCATTTCCATTGAATTTGGAATGGGGATCGAAAGTTACGTTGTGGTGCATAACATAGCCAAAAGGCACAACGTTGGCACCATGGCCCGAAGCGCCACCGCCTTTGGCGTCTCCGAACTCATCCTCGTCGGCCGTCGGGACTTCAACGCCTTTGGTAGCCATGGTTCTACTTCTCATATCCGCTTCCGCCATTTTCACTCCCTTCTCGACGCTCAAACTTTCCTCAAGGAGAAGGATTGCGATATATGTGGCGTGGAGATCACTGACAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTTGGAAACGAGGATCCATGTCTCCCTGATGCTTTCAGCATTGAGATTAGTGGCATGGGAACAGGGCTTTCTGCTAAAGAGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTGGGCACTGCGTCTTTGAATGTAACTGTAGCTGCTTCCATTGTCCTACATCATTTTGGTGTTTGGGCAGGATTTCCCGAAAGATGTCGCGACGGTAACAAATTTATAGTGGCTGAAAGACCAGTCAGACAGGTCAAGCGGAATTATTGTGCTGAAACAGAAGAATCCATTATTGAAGAGCGTAAATCCAGGAGGGAGAATGCTTCTAAAGGCTTCTTTGATGAAGGGATGATTGATGATTCTACATCCAACCTTCTTGATACATTGTTTATTGATCAATGA

Coding sequence (CDS)

ATGGGGATCGAAAGTTACGTTGTGGTGCATAACATAGCCAAAAGGCACAACGTTGGCACCATGGCCCGAAGCGCCACCGCCTTTGGCGTCTCCGAACTCATCCTCGTCGGCCGTCGGGACTTCAACGCCTTTGGTAGCCATGGTTCTACTTCTCATATCCGCTTCCGCCATTTTCACTCCCTTCTCGACGCTCAAACTTTCCTCAAGGAGAAGGATTGCGATATATGTGGCGTGGAGATCACTGACAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTTGGAAACGAGGATCCATGTCTCCCTGATGCTTTCAGCATTGAGATTAGTGGCATGGGAACAGGGCTTTCTGCTAAAGAGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTGGGCACTGCGTCTTTGAATGTAACTGTAGCTGCTTCCATTGTCCTACATCATTTTGGTGTTTGGGCAGGATTTCCCGAAAGATGTCGCGACGGTAACAAATTTATAGTGGCTGAAAGACCAGTCAGACAGGTCAAGCGGAATTATTGTGCTGAAACAGAAGAATCCATTATTGAAGAGCGTAAATCCAGGAGGGAGAATGCTTCTAAAGGCTTCTTTGATGAAGGGATGATTGATGATTCTACATCCAACCTTCTTGATACATTGTTTATTGATCAATGA

Protein sequence

MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHSLLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEISGMGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ
Homology
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BLAST of MELO3C006586.2 vs. NCBI nr
Match: XP_008438758.1 (PREDICTED: putative TrmH family tRNA/rRNA methyltransferase [Cucumis melo])

HSP 1 Score: 434.9 bits (1117), Expect = 1.8e-118
Identity = 218/233 (93.56%), Postives = 218/233 (93.56%), Query Frame = 0 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS
Sbjct: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEISGMGT 120
           LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNE               GT
Sbjct: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNE---------------GT 120

Query: 121 GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER 180
           GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER
Sbjct: 121 GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER 180

Query: 181 PVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 234
           PVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ
Sbjct: 181 PVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 218

[Close]
BLAST of MELO3C006586.2 vs. NCBI nr
Match: XP_004134172.1 (PREDICTED: rRNA methyltransferase 1, mitochondrial [Cucumis sativus] >KGN57046.1 hypothetical protein Csa_3G150750 [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 1.1e-115
Identity = 211/233 (90.56%), Postives = 216/233 (92.70%), Query Frame = 0 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEISGMGT 120
           LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNE               GT
Sbjct: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNE---------------GT 120

Query: 121 GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER 180
           GLSAKECAICDFF+YIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDG+KFIVAER
Sbjct: 121 GLSAKECAICDFFVYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGSKFIVAER 180

Query: 181 PVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 234
           PVRQVKRNYC ETEESI+EERKSRRENASKGFFDEGMID+S SNLLDTLFIDQ
Sbjct: 181 PVRQVKRNYCTETEESIMEERKSRRENASKGFFDEGMIDESASNLLDTLFIDQ 218

[Close]
BLAST of MELO3C006586.2 vs. NCBI nr
Match: XP_022138159.1 (uncharacterized protein LOC111009398 [Momordica charantia])

HSP 1 Score: 419.1 bits (1076), Expect = 9.9e-114
Identity = 206/232 (88.79%), Postives = 215/232 (92.67%), Query Frame = 0 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHSL 61
           GI+SYVVVHNIAKRHN+GT+ARSATAFGVSELILVGRRDFNAFGSHGSTSH+RFRHFHSL
Sbjct: 8   GIQSYVVVHNIAKRHNIGTLARSATAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHSL 67

Query: 62  LDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEISGMGTG 121
           LDAQ FLKEKDCDICGVEIT+NAVAVNQHPF++STAFLLGNE               GTG
Sbjct: 68  LDAQNFLKEKDCDICGVEITENAVAVNQHPFRKSTAFLLGNE---------------GTG 127

Query: 122 LSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERP 181
           LSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERP
Sbjct: 128 LSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERP 187

Query: 182 VRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 234
           V+QVKRNYCAET ESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFID+
Sbjct: 188 VKQVKRNYCAETAESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDE 224

[Close]
BLAST of MELO3C006586.2 vs. NCBI nr
Match: XP_022953920.1 (uncharacterized protein LOC111456233 isoform X2 [Cucurbita moschata])

HSP 1 Score: 412.9 bits (1060), Expect = 7.1e-112
Identity = 203/233 (87.12%), Postives = 213/233 (91.42%), Query Frame = 0 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           MG ESYVVVHNIAKRHNVGT+ARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 86  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 145

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEISGMGT 120
           LLDA+ FL+EKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNE               GT
Sbjct: 146 LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNE---------------GT 205

Query: 121 GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER 180
           GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER
Sbjct: 206 GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER 265

Query: 181 PVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 234
           PV+Q KRNYC ETEESI+EERKSRR+NASKGFFDEG IDDSTSNLLDTLFI++
Sbjct: 266 PVKQGKRNYCPETEESIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 303

[Close]
BLAST of MELO3C006586.2 vs. NCBI nr
Match: XP_022953849.1 (uncharacterized protein LOC111456233 isoform X1 [Cucurbita moschata])

HSP 1 Score: 412.9 bits (1060), Expect = 7.1e-112
Identity = 203/233 (87.12%), Postives = 213/233 (91.42%), Query Frame = 0 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           MG ESYVVVHNIAKRHNVGT+ARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 93  MGFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHVRFRHFHS 152

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEISGMGT 120
           LLDA+ FL+EKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNE               GT
Sbjct: 153 LLDARNFLQEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNE---------------GT 212

Query: 121 GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER 180
           GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER
Sbjct: 213 GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER 272

Query: 181 PVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 234
           PV+Q KRNYC ETEESI+EERKSRR+NASKGFFDEG IDDSTSNLLDTLFI++
Sbjct: 273 PVKQGKRNYCPETEESIVEERKSRRDNASKGFFDEGTIDDSTSNLLDTLFINE 310

[Close]
BLAST of MELO3C006586.2 vs. TAIR10
Match: AT4G15520.1 (tRNA/rRNA methyltransferase (SpoU) family protein)

HSP 1 Score: 341.7 bits (875), Expect = 3.7e-94
Identity = 172/235 (73.19%), Postives = 197/235 (83.83%), Query Frame = 0 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHSL 61
           G ESYVVVHNIAKRHNVGT+ARSATAFGV+ELILVGRRDFNAFGSHGS SHIRFRHFHSL
Sbjct: 3   GFESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFHSL 62

Query: 62  LDAQTFLK-EKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEISGMGT 121
           ++A+ +LK EKDCDICGVEI D A AVN+HPFKR+TAFLLGNE               G+
Sbjct: 63  IEARNYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNE---------------GS 122

Query: 122 GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER 181
           GLSAKE  ICDFF+YIPQYG GTASLNVTVAASIVLHHFGVWAGF ER RDG+KFIVA+R
Sbjct: 123 GLSAKEYEICDFFVYIPQYGCGTASLNVTVAASIVLHHFGVWAGFSERVRDGSKFIVADR 182

Query: 182 PVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDD--STSNLLDTLFIDQ 234
           PVRQ +RN+CA TEES+IEERK R+E+A  GFFD+   ++  S+S+LLD LF+++
Sbjct: 183 PVRQGRRNFCAGTEESVIEERKLRKESAENGFFDDNGNENGSSSSDLLDGLFLNE 222

[Close]
BLAST of MELO3C006586.2 vs. Swiss-Prot
Match: sp|Q4L3J1|TRMHL_STAHJ (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=SH2477 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-07
Identity = 46/161 (28.57%), Postives = 71/161 (44.10%), Query Frame = 0 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFN-----AFGSHGSTSHIRFR 61
           G+ + V++  +   HN+G++ R+A A GV  +I+  RR        A  S G+  H+   
Sbjct: 93  GLSTVVILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVM 152

Query: 62  HFHSLLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEIS 121
              +L      LKE    + G E  DNA            A ++G+E             
Sbjct: 153 RVTNLAKTIDELKEHGYWVAGAE-ADNATDYRDMAADMPLAIVIGSE------------- 212

Query: 122 GMGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH 158
             G G+S      CDF+I IP  G    SLN +VAAS++++
Sbjct: 213 --GQGMSRLVKDKCDFYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of MELO3C006586.2 vs. Swiss-Prot
Match: sp|Q99W72|TRMHL_STAAM (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=SAV0531 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.2e-07
Identity = 44/161 (27.33%), Postives = 72/161 (44.72%), Query Frame = 0 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFN-----AFGSHGSTSHIRFR 61
           G+ + +++  +   HN+G++ R+A A GV  +I+  RR        A  S G+  H+   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEIS 121
              +L      LK+    + G E  +NA          S A ++G+E             
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSE------------- 212

Query: 122 GMGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH 158
             G G+S      CDF+I IP  G    SLN +VAAS++++
Sbjct: 213 --GQGMSRLVSDKCDFYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of MELO3C006586.2 vs. Swiss-Prot
Match: sp|Q7A794|TRMHL_STAAN (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain N315) OX=158879 GN=SA0490 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.2e-07
Identity = 44/161 (27.33%), Postives = 72/161 (44.72%), Query Frame = 0 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFN-----AFGSHGSTSHIRFR 61
           G+ + +++  +   HN+G++ R+A A GV  +I+  RR        A  S G+  H+   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEIS 121
              +L      LK+    + G E  +NA          S A ++G+E             
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSE------------- 212

Query: 122 GMGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH 158
             G G+S      CDF+I IP  G    SLN +VAAS++++
Sbjct: 213 --GQGMSRLVSDKCDFYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of MELO3C006586.2 vs. Swiss-Prot
Match: sp|Q6GJD7|TRMHL_STAAR (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0535 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.2e-07
Identity = 44/161 (27.33%), Postives = 72/161 (44.72%), Query Frame = 0 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFN-----AFGSHGSTSHIRFR 61
           G+ + +++  +   HN+G++ R+A A GV  +I+  RR        A  S G+  H+   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEIS 121
              +L      LK+    + G E  +NA          S A ++G+E             
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSE------------- 212

Query: 122 GMGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH 158
             G G+S      CDF+I IP  G    SLN +VAAS++++
Sbjct: 213 --GQGMSRLVSDKCDFYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of MELO3C006586.2 vs. Swiss-Prot
Match: sp|Q6GBV6|TRMHL_STAAS (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0489 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.2e-07
Identity = 44/161 (27.33%), Postives = 72/161 (44.72%), Query Frame = 0 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFN-----AFGSHGSTSHIRFR 61
           G+ + +++  +   HN+G++ R+A A GV  +I+  RR        A  S G+  H+   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEIS 121
              +L      LK+    + G E  +NA          S A ++G+E             
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSE------------- 212

Query: 122 GMGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLH 158
             G G+S      CDF+I IP  G    SLN +VAAS++++
Sbjct: 213 --GQGMSRLVSDKCDFYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of MELO3C006586.2 vs. TrEMBL
Match: tr|A0A1S3AXA1|A0A1S3AXA1_CUCME (putative TrmH family tRNA/rRNA methyltransferase OS=Cucumis melo OX=3656 GN=LOC103483771 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 1.2e-118
Identity = 218/233 (93.56%), Postives = 218/233 (93.56%), Query Frame = 0 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS
Sbjct: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEISGMGT 120
           LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNE               GT
Sbjct: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNE---------------GT 120

Query: 121 GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER 180
           GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER
Sbjct: 121 GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER 180

Query: 181 PVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 234
           PVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ
Sbjct: 181 PVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 218

[Close]
BLAST of MELO3C006586.2 vs. TrEMBL
Match: tr|A0A0A0LAH1|A0A0A0LAH1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150750 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 7.0e-116
Identity = 211/233 (90.56%), Postives = 216/233 (92.70%), Query Frame = 0 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEISGMGT 120
           LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNE               GT
Sbjct: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNE---------------GT 120

Query: 121 GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER 180
           GLSAKECAICDFF+YIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDG+KFIVAER
Sbjct: 121 GLSAKECAICDFFVYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGSKFIVAER 180

Query: 181 PVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 234
           PVRQVKRNYC ETEESI+EERKSRRENASKGFFDEGMID+S SNLLDTLFIDQ
Sbjct: 181 PVRQVKRNYCTETEESIMEERKSRRENASKGFFDEGMIDESASNLLDTLFIDQ 218

[Close]
BLAST of MELO3C006586.2 vs. TrEMBL
Match: tr|A0A2I4F315|A0A2I4F315_9ROSI (uncharacterized protein LOC108995036 OS=Juglans regia OX=51240 GN=LOC108995036 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 5.4e-100
Identity = 185/232 (79.74%), Postives = 198/232 (85.34%), Query Frame = 0 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           M IE YVVVHNIAKRHNVGT+ARSATAFGVSELILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MSIECYVVVHNIAKRHNVGTLARSATAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEISGMGT 120
           L DA+ FLKEKDCDICGVEITD A+AVNQHPF +STAFLLGNE               GT
Sbjct: 61  LPDARQFLKEKDCDICGVEITDTAMAVNQHPFNKSTAFLLGNE---------------GT 120

Query: 121 GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER 180
           GLSAKEC ICDFF+YIPQYG GTASLNVTVAASIVLHHFGVWAGFPER RDGNK++VAER
Sbjct: 121 GLSAKECEICDFFVYIPQYGFGTASLNVTVAASIVLHHFGVWAGFPERTRDGNKYVVAER 180

Query: 181 PVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFID 233
           PV+Q +RNYCAET ++IIEERKSRRENAS GFFDE    +S SNLLD LF D
Sbjct: 181 PVKQGRRNYCAETADTIIEERKSRRENASNGFFDESGNSNSASNLLDALFGD 217

[Close]
BLAST of MELO3C006586.2 vs. TrEMBL
Match: tr|A0A2R6RV82|A0A2R6RV82_ACTCH (tRNA (Guanosine(18)-2'-O)-methyltransferase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04321 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 9.2e-100
Identity = 185/229 (80.79%), Postives = 196/229 (85.59%), Query Frame = 0 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHSL 61
           G ESYVVVHNIAKRHNVGT+ARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+RFRHFHSL
Sbjct: 6   GFESYVVVHNIAKRHNVGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHLRFRHFHSL 65

Query: 62  LDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEISGMGTG 121
            DA+ FLKE+DCDICGVEITDNAVAVNQHPFK+STAFLLGNE               GTG
Sbjct: 66  SDARLFLKERDCDICGVEITDNAVAVNQHPFKKSTAFLLGNE---------------GTG 125

Query: 122 LSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERP 181
           LSAKEC ICDFF+YIPQYG GTASLNVTVAASIVLHHFGVWAGF ER RDGNKFIVAERP
Sbjct: 126 LSAKECEICDFFVYIPQYGCGTASLNVTVAASIVLHHFGVWAGFAERSRDGNKFIVAERP 185

Query: 182 VRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLF 231
           V QV+RNYCAE  ++IIEERK +RENAS GFFDE    DS SNLLD LF
Sbjct: 186 VNQVRRNYCAEMSDAIIEERKLKRENASNGFFDESGKGDSPSNLLDGLF 219

[Close]
BLAST of MELO3C006586.2 vs. TrEMBL
Match: tr|A0A2N9IXH8|A0A2N9IXH8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56876 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.6e-99
Identity = 180/232 (77.59%), Postives = 201/232 (86.64%), Query Frame = 0 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           M +E YVVVHNIAKRHN+GT+ARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+ FRHFHS
Sbjct: 1   MSVECYVVVHNIAKRHNIGTLARSATAFGVSEVILVGRRDFNAFGSHGSTSHLSFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEDPCLPDAFSIEISGMGT 120
           L +A+ FLKEKDCDICGVEITD AVAVNQHPFK+STAFLLGNE               GT
Sbjct: 61  LSEARQFLKEKDCDICGVEITDTAVAVNQHPFKKSTAFLLGNE---------------GT 120

Query: 121 GLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAER 180
           GLSAKEC +CDFF+YIPQYG GTASLNVTVAASIVLH+FGVWAGFPER RDG+KF+VAER
Sbjct: 121 GLSAKECEVCDFFVYIPQYGCGTASLNVTVAASIVLHNFGVWAGFPERTRDGSKFVVAER 180

Query: 181 PVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFID 233
           PV+QV+RN+CAET ++IIEERKSRRENAS GFFDE  +++S SNLLD LF D
Sbjct: 181 PVKQVRRNFCAETADTIIEERKSRRENASNGFFDESGVNNSASNLLDALFSD 217

The following BLAST results are available for this feature:
BLAST of MELO3C006586.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008438758.11.8e-11893.56PREDICTED: putative TrmH family tRNA/rRNA methyltransferase [Cucumis melo][more]
XP_004134172.11.1e-11590.56PREDICTED: rRNA methyltransferase 1, mitochondrial [Cucumis sativus] >KGN57046.1... [more]
XP_022138159.19.9e-11488.79uncharacterized protein LOC111009398 [Momordica charantia][more]
XP_022953920.17.1e-11287.12uncharacterized protein LOC111456233 isoform X2 [Cucurbita moschata][more]
XP_022953849.17.1e-11287.12uncharacterized protein LOC111456233 isoform X1 [Cucurbita moschata][more]
BLAST of MELO3C006586.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15520.13.7e-9473.19tRNA/rRNA methyltransferase (SpoU) family protein[more]
BLAST of MELO3C006586.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q4L3J1|TRMHL_STAHJ1.5e-0728.57Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus haemolyticus ... [more]
sp|Q99W72|TRMHL_STAAM4.2e-0727.33Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai... [more]
sp|Q7A794|TRMHL_STAAN4.2e-0727.33Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai... [more]
sp|Q6GJD7|TRMHL_STAAR4.2e-0727.33Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai... [more]
sp|Q6GBV6|TRMHL_STAAS4.2e-0727.33Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai... [more]
BLAST of MELO3C006586.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AXA1|A0A1S3AXA1_CUCME1.2e-11893.56putative TrmH family tRNA/rRNA methyltransferase OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A0A0LAH1|A0A0A0LAH1_CUCSA7.0e-11690.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150750 PE=4 SV=1[more]
tr|A0A2I4F315|A0A2I4F315_9ROSI5.4e-10079.74uncharacterized protein LOC108995036 OS=Juglans regia OX=51240 GN=LOC108995036 P... [more]
tr|A0A2R6RV82|A0A2R6RV82_ACTCH9.2e-10080.79tRNA (Guanosine(18)-2'-O)-methyltransferase OS=Actinidia chinensis var. chinensi... [more]
tr|A0A2N9IXH8|A0A2N9IXH8_FAGSY1.6e-9977.59Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56876 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0008173RNA methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: INTERPRO
TermDefinition
IPR029028Alpha/beta_knot_MTases
IPR001537SpoU_MeTrfase
IPR029026tRNA_m1G_MTases_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
biological_process GO:0001510 RNA methylation
biological_process GO:0006396 RNA processing
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0000453 enzyme-directed rRNA 2'-O-methylation
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0070039 rRNA (guanosine-2'-O-)-methyltransferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006586.2.1MELO3C006586.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3DG3DSA:3.40.1280.10coord: 3..173
e-value: 4.0E-30
score: 106.5
IPR001537tRNA/rRNA methyltransferase, SpoU typePFAMPF00588SpoU_methylasecoord: 120..157
e-value: 1.9E-5
score: 24.7
coord: 6..109
e-value: 1.1E-15
score: 57.9
NoneNo IPR availablePANTHERPTHR43191:SF1OBP33PEP LIKE PROTEINcoord: 3..170
NoneNo IPR availablePANTHERPTHR43191FAMILY NOT NAMEDcoord: 3..170
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILYSSF75217alpha/beta knotcoord: 5..160

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006586.2Csa3G150750Cucumber (Chinese Long) v2cumedB223
MELO3C006586.2CSPI03G13710Wild cucumber (PI 183967)cpimedB224
MELO3C006586.2Cucsa.253780Cucumber (Gy14) v1cgymedB432
MELO3C006586.2Lsi05G014780Bottle gourd (USVL1VR-Ls)lsimedB385
MELO3C006586.2Cp4.1LG08g04360Cucurbita pepo (Zucchini)cpemedB951
MELO3C006586.2CsGy3G013860Cucumber (Gy14) v2cgybmedB201
MELO3C006586.2Cla021684Watermelon (97103) v1medwmB447
MELO3C006586.2ClCG05G005600Watermelon (Charleston Gray)medwcgB416
MELO3C006586.2Cla97C05G087000Watermelon (97103) v2medwmbB423
MELO3C006586.2Bhi01G000653Wax gourdmedwgoB530
MELO3C006586.2Carg17385Silver-seed gourdcarmedB0616
MELO3C006586.2Carg20156Silver-seed gourdcarmedB0840
MELO3C006586.2CsaV3_3G013940Cucumber (Chinese Long) v3cucmedB230
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006586.2Cucumber (Chinese Long) v3cucmedB494
MELO3C006586.2Watermelon (97103) v2medwmbB442
MELO3C006586.2Wax gourdmedwgoB522
MELO3C006586.2Cucumber (Gy14) v2cgybmedB431
MELO3C006586.2Cucumber (Gy14) v1cgymedB593
MELO3C006586.2Cucurbita maxima (Rimu)cmamedB273
MELO3C006586.2Cucurbita maxima (Rimu)cmamedB398
MELO3C006586.2Cucurbita maxima (Rimu)cmamedB863
MELO3C006586.2Cucurbita maxima (Rimu)cmamedB950
MELO3C006586.2Cucurbita moschata (Rifu)cmomedB260
MELO3C006586.2Cucurbita moschata (Rifu)cmomedB385
MELO3C006586.2Cucurbita moschata (Rifu)cmomedB857
MELO3C006586.2Cucurbita moschata (Rifu)cmomedB940
MELO3C006586.2Cucurbita pepo (Zucchini)cpemedB170
MELO3C006586.2Cucurbita pepo (Zucchini)cpemedB371
MELO3C006586.2Cucurbita pepo (Zucchini)cpemedB693
MELO3C006586.2Wild cucumber (PI 183967)cpimedB484
MELO3C006586.2Cucumber (Chinese Long) v2cumedB475
MELO3C006586.2Melon (DHL92) v3.6.1medmedB049
MELO3C006586.2Bottle gourd (USVL1VR-Ls)lsimedB032
MELO3C006586.2Watermelon (Charleston Gray)medwcgB437
MELO3C006586.2Watermelon (97103) v1medwmB474
MELO3C006586.2Silver-seed gourdcarmedB0074
MELO3C006586.2Silver-seed gourdcarmedB0340