MELO3C006586 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006586
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptiontRNA/rRNA methyltransferase family protein
Locationchr6 : 4382799 .. 4385188 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCCTTCTTCGATCTGCGGCCATAGTTGAGTTGCAAGCTTTGTCAAAAACCCTAAAATCCCTAAACCCCCTTCACTTCATTTTCAATCAATTCATTTCCATTGAATTTGGAATGGGGATCGAAAGTTACGTTGTGGTGCATAACATAGCCAAAAGGCACAACGTTGGCACCATGGCCCGAAGCGCCACCGCCTTTGGCGTCTCCGAACTCATCCTCGTCGGCCGTCGGGACTTCAACGCCTTTGGTAGCCATGGTTCTACTTCTCATATCCGCTTCCGCCATTTTCACTCCCTTCTCGACGCTCAAACTTTCCTCAAGGTTTTGTTTTCTTTCTTTCTTTCTTCCCTTTCGTAGTAGTGTAATCATGGGTTTGTTTTTGAATTTTGAATTTCGTTCTCCGGTTCTGTAGGAGAAGGATTGCGATATATGTGGCGTGGAGATCACTGACAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTTGGAAACGAGGTTGGTTGTTCGTTTTAATTTTATTGGCTTTTCATTGATAGTGGTCTCTATATTCTTCTGTTGGAATTCCCTTGTTTGATCTGTCCTTATCTATTTCCATGGAATTTCTGTACGCTGTAACTCATAGTGTCGAATTGATAGGGTTGTTTTCTATATGCTGTAGTCGGTTAACAAGTTCCTTCCTAATTCAGTTGATACTTATGACTTAAGAACTTTTTATCTCCTTGAGTTGATCTTGAGGTGGGCAAAACATCCGCGAGACTAGTGGGGTTGGCCATGAGTTATATAATGTTAGGAATGGGCTTCCCTAGCATGGTAAAAAAATAATAACCACTTGATGTTTCTCTAGCAATAATGTTTGCCATAATGCTAATGCAGTATTTTTCCATTTTTGCAATGATGAAATTAGGACTTGATATGGCTGGCATTGTAGATCTCTTGCTTTATTGTAGGATCCATGTCTCCCTGATGCTTTCAGCATTGAGATTAGTGGCATGGTCATCTGTTGTCTGGACCGAATTGGATCAACATCACTTGGAAATTAATTTGACATTAGTTTCAGCTTTGGGTCACCCTTTTGATGGTTATATGCACGTTGTTTTTAGGGAACAGGGCTTTCTGCTAAAGAGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTGGGCACTGCGTCTTTGAATGTAACTGTAGCTGCTTCCATTGTCCTACATCATTTTGGTGGTAATTAATCCAGACCTTTGCATTTTGATCTCCCTCTTTTGAGTTTCTTTTGCGTACATGTCTAGTGTACATCAACTGTAAGAGCTGCGAGTCTCTTAATATTGCTCATCCATACTTTTGGTTTTTACCAAGCAAAACTGTGAGTACTGTAAAATTATGAAATCTATGAAAGGAGAACTACAAGAAGAAACACACATATATCTTAGAAGTTGGAACTTAGAAGAACAGTTGTTTGATCTAATCATTTTTCCTATTTCTCCCGAGTCTTGAATCAATTCTTCATACTGGAAAGTGATCCCTTCAAGCTTAAACTAAGGAAAGTGTGTCCTAGGAATAACTATGGCTGAGTTGAATTGAATAATGTGGCAGTTTGTACTGGCGCACATAGTTGATTTTGACGATGACCATCTAGGTAGATGGATCCTCTCACATGTTTCTAGTGTGCATATATTGAGATTTAAGTGAAAACCGAGTAAGTTATGTCTTATTTGATTTAATGGAAGTGATACTTGTCTATTTCTCTAGATGTAACTTTAAATTTTCATACTGTATTTTTCAGTTTGGGCAGGATTTCCCGAAAGATGTCGCGACGGTAACAAATTTATAGTGGCTGAAAGACCAGTCAGACAGGTCAAGCGGAATTATTGTGCTGAAACAGAAGAATCCATTATTGAAGAGCGTAAATCCAGGAGGGAGAATGCTTCTAAAGGCTTCTTTGATGAAGGGATGATTGATGATTCTACATCCAACCTTCTTGATACATTGTTTATTGATCAATGATTGGAGTTGGGGATGTGAGTAGCTATTCTATTATCATATGCATCCAGAACGCACTGGCAACCTGGCAACCTTCAGGACCATTGTTGATTAGCACCATTACTGAAGGCATTCACTGCAGGAACCTGTTCTGGAGAGAGGAAATTCTTCTCCTGTCTTTTTCTTTATTATTCTTATCTTTGAATTTTCCTAGAAAGTCCGTGGATTTATATTTAGTTAATTAACTTGATGGCTGACTTGCCAAAAAAACATTGCCACATGGGGTAGGGTTGATTGAGGAAATGTAGGGTTGATAGTGCTATCTTTTTGTCAAAAAAACACCATGTACATGTAACATGTTATGCATAGGAAATATCAAAATTTCTTTCT

mRNA sequence

GCTCCTTCTTCGATCTGCGGCCATAGTTGAGTTGCAAGCTTTGTCAAAAACCCTAAAATCCCTAAACCCCCTTCACTTCATTTTCAATCAATTCATTTCCATTGAATTTGGAATGGGGATCGAAAGTTACGTTGTGGTGCATAACATAGCCAAAAGGCACAACGTTGGCACCATGGCCCGAAGCGCCACCGCCTTTGGCGTCTCCGAACTCATCCTCGTCGGCCGTCGGGACTTCAACGCCTTTGGTAGCCATGGTTCTACTTCTCATATCCGCTTCCGCCATTTTCACTCCCTTCTCGACGCTCAAACTTTCCTCAAGGAGAAGGATTGCGATATATGTGGCGTGGAGATCACTGACAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTTGGAAACGAGGGAACAGGGCTTTCTGCTAAAGAGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTGGGCACTGCGTCTTTGAATGTAACTGTAGCTGCTTCCATTGTCCTACATCATTTTGGTGTTTGGGCAGGATTTCCCGAAAGATGTCGCGACGGTAACAAATTTATAGTGGCTGAAAGACCAGTCAGACAGGTCAAGCGGAATTATTGTGCTGAAACAGAAGAATCCATTATTGAAGAGCGTAAATCCAGGAGGGAGAATGCTTCTAAAGGCTTCTTTGATGAAGGGATGATTGATGATTCTACATCCAACCTTCTTGATACATTGTTTATTGATCAATGATTGGAGTTGGGGATGTGAGTAGCTATTCTATTATCATATGCATCCAGAACGCACTGGCAACCTGGCAACCTTCAGGACCATTGTTGATTAGCACCATTACTGAAGGCATTCACTGCAGGAACCTGTTCTGGAGAGAGGAAATTCTTCTCCTGTCTTTTTCTTTATTATTCTTATCTTTGAATTTTCCTAGAAAGTCCGTGGATTTATATTTAGTTAATTAACTTGATGGCTGACTTGCCAAAAAAACATTGCCACATGGGGTAGGGTTGATTGAGGAAATGTAGGGTTGATAGTGCTATCTTTTTGTCAAAAAAACACCATGTACATGTAACATGTTATGCATAGGAAATATCAAAATTTCTTTCT

Coding sequence (CDS)

ATGGGGATCGAAAGTTACGTTGTGGTGCATAACATAGCCAAAAGGCACAACGTTGGCACCATGGCCCGAAGCGCCACCGCCTTTGGCGTCTCCGAACTCATCCTCGTCGGCCGTCGGGACTTCAACGCCTTTGGTAGCCATGGTTCTACTTCTCATATCCGCTTCCGCCATTTTCACTCCCTTCTCGACGCTCAAACTTTCCTCAAGGAGAAGGATTGCGATATATGTGGCGTGGAGATCACTGACAACGCCGTGGCTGTCAATCAGCATCCTTTCAAGAGGAGCACCGCTTTTCTTCTTGGAAACGAGGGAACAGGGCTTTCTGCTAAAGAGTGTGCAATCTGCGACTTCTTCATTTACATCCCACAATATGGTGTGGGCACTGCGTCTTTGAATGTAACTGTAGCTGCTTCCATTGTCCTACATCATTTTGGTGTTTGGGCAGGATTTCCCGAAAGATGTCGCGACGGTAACAAATTTATAGTGGCTGAAAGACCAGTCAGACAGGTCAAGCGGAATTATTGTGCTGAAACAGAAGAATCCATTATTGAAGAGCGTAAATCCAGGAGGGAGAATGCTTCTAAAGGCTTCTTTGATGAAGGGATGATTGATGATTCTACATCCAACCTTCTTGATACATTGTTTATTGATCAATGA

Protein sequence

MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHSLLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIYIPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEESIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ*
Homology
[Close]
BLAST of MELO3C006586 vs. Swiss-Prot
Match: TRMHL_STAHJ (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH2477 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09
Identity = 46/146 (31.51%), Postives = 69/146 (47.26%), Query Frame = 1 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFN-----AFGSHGSTSHIRFR 61
           G+ + V++  +   HN+G++ R+A A GV  +I+  RR        A  S G+  H+   
Sbjct: 93  GLSTVVILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVM 152

Query: 62  HFHSLLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L      LKE    + G E  DNA            A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKEHGYWVAGAE-ADNATDYRDMAADMPLAIVIGSEGQGMSRLVKDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of MELO3C006586 vs. Swiss-Prot
Match: TRMHL_STAAM (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0531 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.2e-09
Identity = 44/146 (30.14%), Postives = 70/146 (47.95%), Query Frame = 1 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFN-----AFGSHGSTSHIRFR 61
           G+ + +++  +   HN+G++ R+A A GV  +I+  RR        A  S G+  H+   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L      LK+    + G E  +NA          S A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of MELO3C006586 vs. Swiss-Prot
Match: TRMHL_STAAN (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain N315) GN=SA0490 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.2e-09
Identity = 44/146 (30.14%), Postives = 70/146 (47.95%), Query Frame = 1 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFN-----AFGSHGSTSHIRFR 61
           G+ + +++  +   HN+G++ R+A A GV  +I+  RR        A  S G+  H+   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L      LK+    + G E  +NA          S A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of MELO3C006586 vs. Swiss-Prot
Match: TRMHL_STAAR (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0535 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.2e-09
Identity = 44/146 (30.14%), Postives = 70/146 (47.95%), Query Frame = 1 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFN-----AFGSHGSTSHIRFR 61
           G+ + +++  +   HN+G++ R+A A GV  +I+  RR        A  S G+  H+   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L      LK+    + G E  +NA          S A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of MELO3C006586 vs. Swiss-Prot
Match: TRMHL_STAAS (Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0489 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.2e-09
Identity = 44/146 (30.14%), Postives = 70/146 (47.95%), Query Frame = 1 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFN-----AFGSHGSTSHIRFR 61
           G+ + +++  +   HN+G++ R+A A GV  +I+  RR        A  S G+  H+   
Sbjct: 93  GLSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVI 152

Query: 62  HFHSLLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICD 121
              +L      LK+    + G E  +NA          S A ++G+EG G+S      CD
Sbjct: 153 RVTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCD 212

Query: 122 FFIYIPQYGVGTASLNVTVAASIVLH 143
           F+I IP  G    SLN +VAAS++++
Sbjct: 213 FYIKIPMVG-HVNSLNASVAASLMMY 236

[Close]
BLAST of MELO3C006586 vs. TrEMBL
Match: A0A0A0LAH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150750 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 7.7e-119
Identity = 211/218 (96.79%), Postives = 216/218 (99.08%), Query Frame = 1 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFF+Y
Sbjct: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE 180
           IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDG+KFIVAERPVRQVKRNYC ETEE
Sbjct: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGSKFIVAERPVRQVKRNYCTETEE 180

Query: 181 SIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 219
           SI+EERKSRRENASKGFFDEGMID+S SNLLDTLFIDQ
Sbjct: 181 SIMEERKSRRENASKGFFDEGMIDESASNLLDTLFIDQ 218

[Close]
BLAST of MELO3C006586 vs. TrEMBL
Match: A5AVL9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02300 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 3.8e-102
Identity = 184/217 (84.79%), Postives = 197/217 (90.78%), Query Frame = 1 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           M +ESYVVVHNIAKRHNVGT+ARSA+A GVSELILVGRRDFN+FGSHGSTSH+RFRHFHS
Sbjct: 1   MVVESYVVVHNIAKRHNVGTLARSASALGVSELILVGRRDFNSFGSHGSTSHLRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDA+ FLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLS KEC ICDFF+Y
Sbjct: 61  LLDARHFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSVKECEICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE 180
           IPQYG GTASLNVTVAASIVLHHFGVWAGF ER RDGNKF+VAERP +QV+RNYC ET +
Sbjct: 121 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSERIRDGNKFVVAERPAQQVRRNYCTETAD 180

Query: 181 SIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFID 218
           SIIEERK RR+NAS GFFDE    +S SNLLD LF D
Sbjct: 181 SIIEERKIRRQNASNGFFDESGSGESPSNLLDALFGD 217

[Close]
BLAST of MELO3C006586 vs. TrEMBL
Match: A0A067L6D1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02058 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.6e-100
Identity = 181/218 (83.03%), Postives = 197/218 (90.37%), Query Frame = 1 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           MGIESY+VVHNIAKRHNVGT+ARSATAFGV+ELILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MGIESYIVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LL+A+ FLKEKDCDICGVEI D A+ VN+HPF +STAFLLGNEGTGLSAKEC ICDFF+Y
Sbjct: 61  LLEARNFLKEKDCDICGVEIADGALPVNEHPFNKSTAFLLGNEGTGLSAKECEICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE 180
           IPQYG GTASLNVTVAASIVLHHFGVWAGF ER R+GNKFIVAERPV+Q K  YC ETEE
Sbjct: 121 IPQYGCGTASLNVTVAASIVLHHFGVWAGFSERIREGNKFIVAERPVKQAK--YCTETEE 180

Query: 181 SIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 219
           SIIEERK+R+E+AS GFFDE    DS SNLLD LF D+
Sbjct: 181 SIIEERKTRKEHASNGFFDESRNGDSASNLLDALFNDE 216

[Close]
BLAST of MELO3C006586 vs. TrEMBL
Match: A0A061ENU9_THECC (OBP33pep like protein isoform 1 OS=Theobroma cacao GN=TCM_021087 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.6e-100
Identity = 176/218 (80.73%), Postives = 199/218 (91.28%), Query Frame = 1 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           M IESYVVVHNIAK+HNVGT+ARSATAFGVSE+I+VGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MAIESYVVVHNIAKKHNVGTLARSATAFGVSEIIIVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           L DA  +LKEKDCDICGVEITD AV+V +HPFK+STAFLLGNEGTGLSAKEC +CDFF+Y
Sbjct: 61  LTDANLYLKEKDCDICGVEITDGAVSVTEHPFKKSTAFLLGNEGTGLSAKECEMCDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE 180
           IPQYG GTASLNVTVAASIVLHHFGVWAGF ER RDGNKF+VAE+P++QV R YC ET++
Sbjct: 121 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSERIRDGNKFVVAEKPLKQVSRKYCTETDD 180

Query: 181 SIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 219
           SIIEERKSRRENAS GFFDEG    S++NLLD++F ++
Sbjct: 181 SIIEERKSRRENASNGFFDEGKNGASSANLLDSVFTEE 218

[Close]
BLAST of MELO3C006586 vs. TrEMBL
Match: A0A161ZT46_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022857 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.6e-100
Identity = 178/213 (83.57%), Postives = 194/213 (91.08%), Query Frame = 1 

Query: 3   IESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHSLL 62
           +E YVVVHNIAKRHNVGT+ARSATAFGV+ELILVGRRDFN+FGSHGSTSH RFRHFHSL 
Sbjct: 21  VECYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNSFGSHGSTSHCRFRHFHSLA 80

Query: 63  DAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIYIP 122
           DA++FLKEKDCDICGVEITD+AVAVNQHPF +STAFLLGNEGTGLS+KECAICDFF+YIP
Sbjct: 81  DARSFLKEKDCDICGVEITDDAVAVNQHPFTKSTAFLLGNEGTGLSSKECAICDFFVYIP 140

Query: 123 QYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEESI 182
           QYG GTASLNVT+AASIVLHHFGVWAGF ER RDGNKF+VAERPV+Q  RNYC ET E+I
Sbjct: 141 QYGCGTASLNVTIAASIVLHHFGVWAGFSERSRDGNKFVVAERPVKQSGRNYCTETAETI 200

Query: 183 IEERKSRRENASKGFFDEGMIDDSTSNLLDTLF 216
           IEERK R+ENA  GFFDE +  DS SNLLD LF
Sbjct: 201 IEERKLRKENALNGFFDESVKQDSPSNLLDALF 233

[Close]
BLAST of MELO3C006586 vs. TAIR10
Match: AT4G15520.1 (AT4G15520.1 tRNA/rRNA methyltransferase (SpoU) family protein)

HSP 1 Score: 350.5 bits (898), Expect = 7.4e-97
Identity = 172/220 (78.18%), Postives = 195/220 (88.64%), Query Frame = 1 

Query: 2   GIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHSL 61
           G ESYVVVHNIAKRHNVGT+ARSATAFGV+ELILVGRRDFNAFGSHGS SHIRFRHFHSL
Sbjct: 3   GFESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFHSL 62

Query: 62  LDAQTFLK-EKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 121
           ++A+ +LK EKDCDICGVEI D A AVN+HPFKR+TAFLLGNEG+GLSAKE  ICDFF+Y
Sbjct: 63  IEARNYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFFVY 122

Query: 122 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE 181
           IPQYG GTASLNVTVAASIVLHHFGVWAGF ER RDG+KFIVA+RPVRQ +RN+CA TEE
Sbjct: 123 IPQYGCGTASLNVTVAASIVLHHFGVWAGFSERVRDGSKFIVADRPVRQGRRNFCAGTEE 182

Query: 182 SIIEERKSRRENASKGFFDEGMIDD--STSNLLDTLFIDQ 219
           S+IEERK R+E+A  GFFD+   ++  S+S+LLD LF+++
Sbjct: 183 SVIEERKLRKESAENGFFDDNGNENGSSSSDLLDGLFLNE 222

[Close]
BLAST of MELO3C006586 vs. NCBI nr
Match: gi|659076582|ref|XP_008438758.1| (PREDICTED: rRNA methyltransferase 1, mitochondrial [Cucumis melo])

HSP 1 Score: 443.7 bits (1140), Expect = 1.8e-121
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS
Sbjct: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY
Sbjct: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE 180
           IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE
Sbjct: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE 180

Query: 181 SIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 219
           SIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ
Sbjct: 181 SIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 218

[Close]
BLAST of MELO3C006586 vs. NCBI nr
Match: gi|449432771|ref|XP_004134172.1| (PREDICTED: rRNA methyltransferase 1, mitochondrial [Cucumis sativus])

HSP 1 Score: 434.5 bits (1116), Expect = 1.1e-118
Identity = 211/218 (96.79%), Postives = 216/218 (99.08%), Query Frame = 1 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFF+Y
Sbjct: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE 180
           IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDG+KFIVAERPVRQVKRNYC ETEE
Sbjct: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGSKFIVAERPVRQVKRNYCTETEE 180

Query: 181 SIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFIDQ 219
           SI+EERKSRRENASKGFFDEGMID+S SNLLDTLFIDQ
Sbjct: 181 SIMEERKSRRENASKGFFDEGMIDESASNLLDTLFIDQ 218

[Close]
BLAST of MELO3C006586 vs. NCBI nr
Match: gi|225432460|ref|XP_002278797.1| (PREDICTED: uncharacterized protein LOC100252797 isoform X1 [Vitis vinifera])

HSP 1 Score: 379.0 bits (972), Expect = 5.5e-102
Identity = 184/217 (84.79%), Postives = 197/217 (90.78%), Query Frame = 1 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           M +ESYVVVHNIAKRHNVGT+ARSA+A GVSELILVGRRDFN+FGSHGSTSH+RFRHFHS
Sbjct: 1   MVVESYVVVHNIAKRHNVGTLARSASALGVSELILVGRRDFNSFGSHGSTSHLRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           LLDA+ FLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLS KEC ICDFF+Y
Sbjct: 61  LLDARHFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSVKECEICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE 180
           IPQYG GTASLNVTVAASIVLHHFGVWAGF ER RDGNKF+VAERP +QV+RNYC ET +
Sbjct: 121 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSERIRDGNKFVVAERPAQQVRRNYCTETAD 180

Query: 181 SIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFID 218
           SIIEERK RR+NAS GFFDE    +S SNLLD LF D
Sbjct: 181 SIIEERKIRRQNASNGFFDESGSGESPSNLLDALFGD 217

[Close]
BLAST of MELO3C006586 vs. NCBI nr
Match: gi|1012004119|ref|XP_015939488.1| (PREDICTED: putative TrmH family tRNA/rRNA methyltransferase [Arachis duranensis])

HSP 1 Score: 376.3 bits (965), Expect = 3.6e-101
Identity = 178/217 (82.03%), Postives = 201/217 (92.63%), Query Frame = 1 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           MG ESYVVVHNIAKRHNVGT+ARSATAFGVSELILVGRRDFN+FGSHGS++H+RFRHFHS
Sbjct: 1   MGFESYVVVHNIAKRHNVGTLARSATAFGVSELILVGRRDFNSFGSHGSSAHLRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           L DA+ FLKEKD DICGVEIT+NA+ VNQHPFK+STAFLLGNEGTGLSAKEC ICDFF+Y
Sbjct: 61  LHDARQFLKEKDFDICGVEITENAMPVNQHPFKKSTAFLLGNEGTGLSAKECEICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE 180
           IPQYG GTASLNVTVAASIVLHHFGVWAGF ER RDGNKF+VAERPV+QV+RN+C ETE+
Sbjct: 121 IPQYGGGTASLNVTVAASIVLHHFGVWAGFGERSRDGNKFVVAERPVKQVRRNFCTETED 180

Query: 181 SIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFID 218
            I+EERK+RRENA+ GFFDE   ++S+SN+LD LF+D
Sbjct: 181 DIVEERKARRENAANGFFDENENNNSSSNMLDALFVD 217

[Close]
BLAST of MELO3C006586 vs. NCBI nr
Match: gi|1009141791|ref|XP_015888376.1| (PREDICTED: putative TrmH family tRNA/rRNA methyltransferase [Ziziphus jujuba])

HSP 1 Score: 375.9 bits (964), Expect = 4.7e-101
Identity = 181/217 (83.41%), Postives = 200/217 (92.17%), Query Frame = 1 

Query: 1   MGIESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHIRFRHFHS 60
           M +ESYVVVHNIAKRHNVGTMARSA+AFGVSELILVGRRDFNAFGSHGSTSH+RFRHFHS
Sbjct: 1   MVVESYVVVHNIAKRHNVGTMARSASAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHS 60

Query: 61  LLDAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFIY 120
           L +A+ FLK++DCDICGVEITD AVAVNQHPFKRSTAFLLGNEGTGLSAKEC ICDFF+Y
Sbjct: 61  LQEARIFLKKRDCDICGVEITDGAVAVNQHPFKRSTAFLLGNEGTGLSAKECEICDFFVY 120

Query: 121 IPQYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGNKFIVAERPVRQVKRNYCAETEE 180
           IPQYG GTASLNVTVAASIVLH FGVWAGFPER RDGNKF+VAE+PV+Q +RN+C+E  +
Sbjct: 121 IPQYGGGTASLNVTVAASIVLHQFGVWAGFPERSRDGNKFVVAEKPVKQARRNFCSENAD 180

Query: 181 SIIEERKSRRENASKGFFDEGMIDDSTSNLLDTLFID 218
           SIIEERKSRRE+AS GFFDE   ++S+SNLLD LF D
Sbjct: 181 SIIEERKSRRESASNGFFDENGNENSSSNLLDALFDD 217

The following BLAST results are available for this feature:
BLAST of MELO3C006586 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRMHL_STAHJ1.4e-0931.51Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus haemolyticus ... [more]
TRMHL_STAAM4.2e-0930.14Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai... [more]
TRMHL_STAAN4.2e-0930.14Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai... [more]
TRMHL_STAAR4.2e-0930.14Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai... [more]
TRMHL_STAAS4.2e-0930.14Putative TrmH family tRNA/rRNA methyltransferase OS=Staphylococcus aureus (strai... [more]
BLAST of MELO3C006586 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAH1_CUCSA7.7e-11996.79Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150750 PE=4 SV=1[more]
A5AVL9_VITVI3.8e-10284.79Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02300 PE=4 SV=... [more]
A0A067L6D1_JATCU1.6e-10083.03Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02058 PE=4 SV=1[more]
A0A061ENU9_THECC1.6e-10080.73OBP33pep like protein isoform 1 OS=Theobroma cacao GN=TCM_021087 PE=4 SV=1[more]
A0A161ZT46_DAUCA3.6e-10083.57Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022857 PE=4 SV=1[more]
BLAST of MELO3C006586 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15520.17.4e-9778.18 tRNA/rRNA methyltransferase (SpoU) family protein[more]
BLAST of MELO3C006586 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076582|ref|XP_008438758.1|1.8e-121100.00PREDICTED: rRNA methyltransferase 1, mitochondrial [Cucumis melo][more]
gi|449432771|ref|XP_004134172.1|1.1e-11896.79PREDICTED: rRNA methyltransferase 1, mitochondrial [Cucumis sativus][more]
gi|225432460|ref|XP_002278797.1|5.5e-10284.79PREDICTED: uncharacterized protein LOC100252797 isoform X1 [Vitis vinifera][more]
gi|1012004119|ref|XP_015939488.1|3.6e-10182.03PREDICTED: putative TrmH family tRNA/rRNA methyltransferase [Arachis duranensis][more]
gi|1009141791|ref|XP_015888376.1|4.7e-10183.41PREDICTED: putative TrmH family tRNA/rRNA methyltransferase [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001537SpoU_MeTrfase
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0008173RNA methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0001510 RNA methylation
biological_process GO:0006396 RNA processing
biological_process GO:0000453 enzyme-directed rRNA 2'-O-methylation
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0070039 rRNA (guanosine-2'-O-)-methyltransferase activity
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU51015melon EST collection version 4.0transcribed_cluster
MU56150melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006586T1MELO3C006586T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU51015MU51015transcribed_cluster
MU56150MU56150transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001537tRNA/rRNA methyltransferase, SpoU typePFAMPF00588SpoU_methylasecoord: 6..142
score: 2.2
NoneNo IPR availablePANTHERPTHR12029RNA METHYLTRANSFERASEcoord: 6..169
score: 4.7
NoneNo IPR availablePANTHERPTHR12029:SF48OBP33PEP LIKE PROTEINcoord: 6..169
score: 4.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006586Csa3G150750Cucumber (Chinese Long) v2cumeB236
MELO3C006586Cla021684Watermelon (97103) v1mewmB461
MELO3C006586ClCG05G005600Watermelon (Charleston Gray)mewcgB427
MELO3C006586Cla97C05G087000Watermelon (97103) v2mewmbB434
MELO3C006586Bhi01G000653Wax gourdmewgoB529
MELO3C006586CSPI03G13710Wild cucumber (PI 183967)cpimeB230
MELO3C006586Cucsa.253780Cucumber (Gy14) v1cgymeB439
MELO3C006586Lsi05G014780Bottle gourd (USVL1VR-Ls)lsimeB369
MELO3C006586Cp4.1LG08g04360Cucurbita pepo (Zucchini)cpemeB813
MELO3C006586CsGy3G013860Cucumber (Gy14) v2cgybmeB200
MELO3C006586Carg17385Silver-seed gourdcarmeB0610
MELO3C006586Carg20156Silver-seed gourdcarmeB0828
MELO3C006586CsaV3_3G013940Cucumber (Chinese Long) v3cucmeB236
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006586Watermelon (97103) v2mewmbB448
MELO3C006586Wax gourdmewgoB520
MELO3C006586Melon (DHL92) v3.5.1memeB051
MELO3C006586Cucumber (Gy14) v1cgymeB595
MELO3C006586Cucurbita maxima (Rimu)cmameB242
MELO3C006586Cucurbita maxima (Rimu)cmameB342
MELO3C006586Cucurbita maxima (Rimu)cmameB763
MELO3C006586Cucurbita maxima (Rimu)cmameB850
MELO3C006586Cucurbita moschata (Rifu)cmomeB230
MELO3C006586Cucurbita moschata (Rifu)cmomeB335
MELO3C006586Cucurbita moschata (Rifu)cmomeB832
MELO3C006586Cucurbita moschata (Rifu)cmomeB755
MELO3C006586Wild cucumber (PI 183967)cpimeB498
MELO3C006586Cucumber (Chinese Long) v2cumeB496
MELO3C006586Watermelon (Charleston Gray)mewcgB442
MELO3C006586Watermelon (97103) v1mewmB486
MELO3C006586Cucurbita pepo (Zucchini)cpemeB140
MELO3C006586Cucurbita pepo (Zucchini)cpemeB316
MELO3C006586Cucurbita pepo (Zucchini)cpemeB585
MELO3C006586Bottle gourd (USVL1VR-Ls)lsimeB029
MELO3C006586Cucumber (Gy14) v2cgybmeB437
MELO3C006586Silver-seed gourdcarmeB0073
MELO3C006586Silver-seed gourdcarmeB0332
MELO3C006586Cucumber (Chinese Long) v3cucmeB508