Cp4.1LG03g16770 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g16770
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionActin-depolymerizing factor
LocationCp4.1LG03 : 13078108 .. 13081448 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGGCAAGGATTTAGGAAGACGGAGACCCGCGGCAAATCAGTTTGGAAATTCCTGGCGGCGGGGGCCAACGATATACCGAAGAAGAATGATCTTTCGCGCGCAGGAAGAAGCGACATGAATTCCACCTTCAAAGTAACTTATAATCTTGGATTAATCTGTAGAATCATTTGTTTATTCCAGTTCATTCATTTTTTTCGTGGTTCTTATGCCAATGTTTCTACGAATTGATCGGGGGAGAAAGAAGAAAAGGAAAATGCCGCAGAAGCTCCAAGCAAAGAAGAATAAGATGAAAGTAACTCTCTCTCTCTCTCTCTCTTGAATCAAGAAAAGTAGAATTTTCTGCTTCGTTGAGTTAGAAAGATGGAGAGATTGATTATTGTTTCCTTTTTGGTTTTCACGTAGTAATTTAGAAATTTTCACTTATTCCAAGAGCGAAATCCACCAGCGTTTTGTCCACTAGGATTGAGAAGCTCAATGACTTCCTACTGCATGATTATTTGGGCAATTAGGCAGTACTCGATCGATATGAAACAAAATCTGCTTGCCTTGGTTGAACATGTGAGTGTTCTACTGATTCCATTTGAATGTCTTATTATTTTCGCATAATTATGTTCTTAGGATTTCAAATGGAAAAAAAGTGAAGACCGAGTTGATAAATGAGGTTTGATGTGTATATTTCTAGGACCTGCATTGGTGAGCTGATATATTTATTTAGTTTTTGTGATTCATGATAGAAAGAAAATATTCCATGTTTAGTAAACTTTGATCTTCCACTCACTCTTCAATCTCTTGAACTCCAGATTCGAATCTAATTTATAAGAGATTCTTACACATCAGTACTTTATGGAGTAATTTCTTTTTCATTCCTGAACTCTGAAGGGGTATAAATCCACCAATTTGTTCTCTTAAGTTTGATGTTTCAATTCTTGAAATACTCCCTTGAACGCCCATCTTTTTGTTACTTAAACCTTTCTTCTCAGGAGCGGCCAGTTTTTTTCTTGTTCTTCTGTGTAAGATCCATGTTTCTTGGAAGTGATTGTCGTTTCATCCTCCATTTAACTTGCAATCTTCCAATTCTAGGCAATAAGCTAAAAAAAAATCTTCAATCATCTAGTAAGAGAAGCTAGAATGTATTAAAAAAAAAATGTTCCATCAGTTGAACTCGAAAGCTTGTTCCTCTGTCAAGAAACTCTCTTTCTTTCTTAGGTGTACAAACAAAAAGTAAACCAGTTCATTCTCAATCTACAATCATATACCAGCTGTTTCAAATCATTTCATTTCTTCATGAGTAGACTGTTCTAACGTGAATGCATTTTGACTTAACGTGTTGTGCTGTTTGATTGGATGGAATTATTTATATTCTCATTCTCCACAGATTGGCAATGGTGGCAAATCTTCAGGGTTCCCATAAACCCCTCGATTTGGAGAAAATCTTGGTAAAATTCCTTTGCATTATTTGCCTCATTATGGTGCGTTGATTGAATGGTCAGAACAATTTAAGTTAGATCTCCAGAGTCCTAGGATAGAAGCTCTATCACTTGTTCTTTTTGGTATGCCCTTGTGCTTTTCTTCAATGAAAACTCGGTTTTTAAGTAAGAAACTATACGTCCATTGGTTATGTTGGGCTCGTGTTCATTGCCTCGTCTTTGACATGTTCATCACTTCACTTTGATACTCTTTAGATCTACTGCGCTCAACCTCTAGTCTCTAAACTTGATAAGAGTTCATGCGCTATTGAGCCGCTTGCGCTTATTTATCTTTGCTTATTTTTAAGTCTCTTGAGCCTTATCACTTTTTATTTTTTCTTTTGTTAGGCCCCCTAAGAAGACCCACAAATTCTCTTTATGGAATATTTTAGATATATAGATTTAGGATTACCCATCTTCTTGTCATACTTGTACTCAATTGGTATGTACTCAATTGGTACGATTCGAGTAACGCATCATTCACGTTCTCTATAGAAGAGATTCATATATAAATTTTGCTTTCTTGAAAACTTCATTTCTGATTTATTTTACAAACTAGTAGAGTTCCAAGTGGTTTTAGCACTTGTATATATAAATAATTTTTCATCTCTTTAAGGTTTTGTAGAATATACAGGCATATATACATACACATACATAGATGCAGATACATACATGTGTGTGTGGTTCTAAAGATCTAAACAAACAATTGAAATAAAGCCGCAGAACAGATTGAAGATTATGCTCTCAACATTTAAAGGGCAAAATTTAGGCAGGTCTTTTTTCTCTCTCTCTTTAAGCTGCAGATTAGGTATTGTATGAATGGGTTATTTTGCAACAGAAACAGCGAGGTATATGGCCAACCAAATAAGAGGAAGACATGGTCAAAATAACCTTAAATATAACAACGTTAAGAGCTTCAAAATCACAACCCTTTTACGTGAAGGACATGAACCTTACAAGGCTAGTCAGACCAGACAAAGGCTAAGGAGAGTTTGAGATATCCAAAATACATAAATAAATCACGAAATCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCTGTTTCATTGAGGGACATCAGAAATCAGACATTATGGTATGTTTCTGTCTCTGTTCTTGATTGAGTTTCTCTTACATTTGTTCTAAAACTGAGAAGGATGTTTTGTTTTGTTGCAATCTTGATAGGCAAATTCATCATCAGGAATGGCAGTGCACGATGAGTGCAAGCTCAAGTTTTTGGATCTGAAGACCAAGAGAAAATACAGGTTCATAGTGTTCAAGATCGATGAGAAGATCCAGCAGGTCATGGTAGAGAAGGTCGGTGGTCACGATGAAACCTACGCGGATTTCACCGCTTCCATCCCTGCCAATGAGTGCCGTTATGCTGTCTTTGATTTTGATTTCACAACCGATGAGAATTGTCAGAAGAGCAAGATTTACTTCATTGCCTGGTATTATCTCCCCACATCATTTTCATATCATCCTAACTCATTCCTCCTATCTCATTTTTTTCAAATGTAATTTATCGGCTTAAAATTTTGTGATTTGTTTATGTAGGTCACCCGACACGTCGAAAATAAGAAGTAAGATGTTATATGCTAGCTCGAAGGATAGATTCAAGAGAGAGTTGGATGGAATTCAAGTTGAATTACAGGCAACTGATCCGAGTGAGATGAGCTTTGACATCATCAAAGCAAGAGCTCTCTAAATCCATCCAACAAAAATAAAAACTATTTTCATTCCAATAAAAAGTTATATATTATTTTTACCTTTTTTATTTTCATAATGTAGTTTTTTATGCTGTTTCTTTTTCCAAGCCTTTTCAATTCCCATCAGTTACTTTAATGGAGAATTTGGAATGGTATATATAAAAATT

mRNA sequence

CGGGCAAGGATTTAGGAAGACGGAGACCCGCGGCAAATCAGTTTGGAAATTCCTGGCGGCGGGGGCCAACGATATACCGAAGAAGAATGATCTTTCGCGCGCAGGAAGAAGCGACATGAATTCCACCTTCAAAGTAACTTATAATCTTGGATTAATCTGTAGAATCATTTGTTTATTCCAGTTCATTCATTTTTTTCGTGGTTCTTATGCCAATGTTTCTACGAATTGATCGGGGGAGAAAGAAGAAAAGGAAAATGCCGCAGAAGCTCCAAGCAAAGAAGAATAAGATGAAATAATTTAGAAATTTTCACTTATTCCAAGAGCGAAATCCACCAGCGTTTTGTCCACTAGGATTGAGAAGCTCAATGACTTCCTACTGCATGATTATTTGGGCAATTAGGCAGTACTCGATCGATATGAAACAAAATCTGCTTGCCTTGGTTGAACATATTGGCAATGGTGGCAAATCTTCAGGGTTCCCATAAACCCCTCGATTTGGAGAAAATCTTGAATATACAGGCATATATACATACACATACATAGATGCAGATACATACATGTGTGTGTGGTTCTAAAGATCTAAACAAACAATTGAAATAAAGCCGCAGAACAGATTGAAGATTATGCTCTCAACATTTAAAGGGCAAAATTTAGAAACAGCGAGGTATATGGCCAACCAAATAAGAGGAAGACATGGTCAAAATAACCTTAAATATAACAACGTTAAGAGCTTCAAAATCACAACCCTTTTACGTGAAGGACATGAACCTTACAAGGCTAGTCAGACCAGACAAAGGCTAAGGAGAGTTTGAGATATCCAAAATACATAAATAAATCACGAAATCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCTGTTTCATTGAGGGACATCAGAAATCAGACATTATGGCAAATTCATCATCAGGAATGGCAGTGCACGATGAGTGCAAGCTCAAGTTTTTGGATCTGAAGACCAAGAGAAAATACAGGTTCATAGTGTTCAAGATCGATGAGAAGATCCAGCAGGTCATGGTAGAGAAGGTCGGTGGTCACGATGAAACCTACGCGGATTTCACCGCTTCCATCCCTGCCAATGAGTGCCGTTATGCTGTCTTTGATTTTGATTTCACAACCGATGAGAATTGTCAGAAGAGCAAGATTTACTTCATTGCCTGGTCACCCGACACGTCGAAAATAAGAAGTAAGATGTTATATGCTAGCTCGAAGGATAGATTCAAGAGAGAGTTGGATGGAATTCAAGTTGAATTACAGGCAACTGATCCGAGTGAGATGAGCTTTGACATCATCAAAGCAAGAGCTCTCTAAATCCATCCAACAAAAATAAAAACTATTTTCATTCCAATAAAAAGTTATATATTATTTTTACCTTTTTTATTTTCATAATGTAGTTTTTTATGCTGTTTCTTTTTCCAAGCCTTTTCAATTCCCATCAGTTACTTTAATGGAGAATTTGGAATGGTATATATAAAAATT

Coding sequence (CDS)

ATGGCAAATTCATCATCAGGAATGGCAGTGCACGATGAGTGCAAGCTCAAGTTTTTGGATCTGAAGACCAAGAGAAAATACAGGTTCATAGTGTTCAAGATCGATGAGAAGATCCAGCAGGTCATGGTAGAGAAGGTCGGTGGTCACGATGAAACCTACGCGGATTTCACCGCTTCCATCCCTGCCAATGAGTGCCGTTATGCTGTCTTTGATTTTGATTTCACAACCGATGAGAATTGTCAGAAGAGCAAGATTTACTTCATTGCCTGGTCACCCGACACGTCGAAAATAAGAAGTAAGATGTTATATGCTAGCTCGAAGGATAGATTCAAGAGAGAGTTGGATGGAATTCAAGTTGAATTACAGGCAACTGATCCGAGTGAGATGAGCTTTGACATCATCAAAGCAAGAGCTCTCTAA

Protein sequence

MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASIPANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAL
Homology
[Close]
BLAST of Cp4.1LG03g16770 vs. Swiss-Prot
Match: ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-60
Identity = 114/139 (82.01%), Postives = 129/139 (92.81%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MAN++SGMAV DECKLKFL+LK+KR YRFI+F+ID   QQV+VEK+G  DETY DFTAS+
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDG--QQVVVEKLGNPDETYDDFTASL 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAVFDFDF TDENCQKSKI+FIAWSPD+S++R KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMSFDIIK+RAL
Sbjct: 121 LQATDPSEMSFDIIKSRAL 137

[Close]
BLAST of Cp4.1LG03g16770 vs. Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.3e-60
Identity = 112/137 (81.75%), Postives = 124/137 (90.51%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANS+SGM V DECKLKFL+LK KR YRFIVFKIDEK QQVM++K+G  +ETY DFT SI
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           P +ECRYAV+D+DFTT ENCQKSKI+FIAWSPDTS++RSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKAR 138
           LQATDPSEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of Cp4.1LG03g16770 vs. Swiss-Prot
Match: ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 3.3e-60
Identity = 112/139 (80.58%), Postives = 128/139 (92.09%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANS+SGMAV DECKLKF +LK+KR +RFI FKIDE+ QQV+V+++G   +TY DFTAS+
Sbjct: 1   MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PA+ECRYAVFDFDF TDENCQKSKI+FI+WSPDTSK+RSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMS DI+KARAL
Sbjct: 121 LQATDPSEMSMDIVKARAL 139

[Close]
BLAST of Cp4.1LG03g16770 vs. Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 5.7e-60
Identity = 111/138 (80.43%), Postives = 126/138 (91.30%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANSSSGMAV DECKLKF++LK KR +RFIVFKI+EK+QQV VE++G  +E+Y DFT  +
Sbjct: 1   MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECL 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           P NECRYAVFDFDF TDENCQKSKI+FI+WSPDTS++RSKMLYAS+KDRFKRELDGIQVE
Sbjct: 61  PPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARA 139
           LQATDPSEMS DIIKARA
Sbjct: 121 LQATDPSEMSMDIIKARA 138

[Close]
BLAST of Cp4.1LG03g16770 vs. Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 229.9 bits (585), Expect = 1.6e-59
Identity = 109/137 (79.56%), Postives = 126/137 (91.97%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANS+SGM V+DECK+KFL+LK KR YRFIVFKIDEK QQV +EK+G  +ETY DFT+SI
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           P +ECRYAV+DFDFTT++NCQKSKI+FIAWSPDTS++RSKMLYASSKDRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMSFDIIKAR 138
           LQATDPSEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of Cp4.1LG03g16770 vs. TrEMBL
Match: A0A0A0L6A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122480 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 4.1e-65
Identity = 125/139 (89.93%), Postives = 135/139 (97.12%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANSSSGMAVHDECKLKFLDLK KRKYRFIVFKI+EK+QQV V+KVGG DETY DFTASI
Sbjct: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAV+D++FTT+ENCQKSKIYFIAWSPD+S+IRSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMSFDIIK+RAL
Sbjct: 121 LQATDPSEMSFDIIKSRAL 139

[Close]
BLAST of Cp4.1LG03g16770 vs. TrEMBL
Match: A5AW33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012391 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.8e-63
Identity = 121/139 (87.05%), Postives = 131/139 (94.24%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANS+SGMAVHDECKLKFL+LK KR +RFIVFKIDE+IQQVMVEK+G  DETY DFT S+
Sbjct: 1   MANSASGMAVHDECKLKFLELKAKRNHRFIVFKIDERIQQVMVEKLGSPDETYEDFTNSL 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PA+ECRYAVFDFDFTTDENCQKSKI+FIAWSPDTS++RSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMS DIIK RAL
Sbjct: 121 LQATDPSEMSMDIIKGRAL 139

[Close]
BLAST of Cp4.1LG03g16770 vs. TrEMBL
Match: D7UC71_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g03040 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.8e-63
Identity = 121/139 (87.05%), Postives = 131/139 (94.24%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANS+SGMAVHDECKLKFL+LK KR +RFIVFKIDE+IQQVMVEK+G  DETY DFT S+
Sbjct: 118 MANSASGMAVHDECKLKFLELKAKRNHRFIVFKIDERIQQVMVEKLGSPDETYEDFTNSL 177

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PA+ECRYAVFDFDFTTDENCQKSKI+FIAWSPDTS++RSKMLYASSKDRFKRELDGIQVE
Sbjct: 178 PADECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 237

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMS DIIK RAL
Sbjct: 238 LQATDPSEMSMDIIKGRAL 256

[Close]
BLAST of Cp4.1LG03g16770 vs. TrEMBL
Match: A0A059CIQ7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02275 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.2e-61
Identity = 120/139 (86.33%), Postives = 129/139 (92.81%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANS+SGMAV+DECKLKFL+LK KR +RFIVFKIDEKIQQV VEKVG  +ETY DFTA +
Sbjct: 1   MANSASGMAVNDECKLKFLELKAKRNHRFIVFKIDEKIQQVSVEKVGSPEETYDDFTACM 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAVFDFDF TDENCQKSKI+FIAWSPDTS++RSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVFDFDFITDENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMS DIIK RAL
Sbjct: 121 LQATDPSEMSIDIIKGRAL 139

[Close]
BLAST of Cp4.1LG03g16770 vs. TrEMBL
Match: M5XE35_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013108mg PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.1e-61
Identity = 117/139 (84.17%), Postives = 132/139 (94.96%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANS+SGMAVHD+CKLKFL+LK KR +RFIVFKI+EKIQQV+VEKVGG DE+Y DF AS+
Sbjct: 1   MANSASGMAVHDDCKLKFLELKAKRNHRFIVFKIEEKIQQVIVEKVGGPDESYDDFAASM 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PA+ECRYAV+DFDFTT+ENCQKSKI+FIAW+PDTS++RSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFTTNENCQKSKIFFIAWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMS DIIK RAL
Sbjct: 121 LQATDPSEMSLDIIKGRAL 139

[Close]
BLAST of Cp4.1LG03g16770 vs. TAIR10
Match: AT4G25590.1 (AT4G25590.1 actin depolymerizing factor 7)

HSP 1 Score: 233.4 bits (594), Expect = 8.4e-62
Identity = 114/139 (82.01%), Postives = 129/139 (92.81%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MAN++SGMAV DECKLKFL+LK+KR YRFI+F+ID   QQV+VEK+G  DETY DFTAS+
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDG--QQVVVEKLGNPDETYDDFTASL 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAVFDFDF TDENCQKSKI+FIAWSPD+S++R KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMSFDIIK+RAL
Sbjct: 121 LQATDPSEMSFDIIKSRAL 137

[Close]
BLAST of Cp4.1LG03g16770 vs. TAIR10
Match: AT1G01750.1 (AT1G01750.1 actin depolymerizing factor 11)

HSP 1 Score: 232.3 bits (591), Expect = 1.9e-61
Identity = 112/137 (81.75%), Postives = 124/137 (90.51%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANS+SGM V DECKLKFL+LK KR YRFIVFKIDEK QQVM++K+G  +ETY DFT SI
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           P +ECRYAV+D+DFTT ENCQKSKI+FIAWSPDTS++RSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKAR 138
           LQATDPSEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of Cp4.1LG03g16770 vs. TAIR10
Match: AT4G00680.1 (AT4G00680.1 actin depolymerizing factor 8)

HSP 1 Score: 229.9 bits (585), Expect = 9.3e-61
Identity = 109/137 (79.56%), Postives = 126/137 (91.97%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANS+SGM V+DECK+KFL+LK KR YRFIVFKIDEK QQV +EK+G  +ETY DFT+SI
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           P +ECRYAV+DFDFTT++NCQKSKI+FIAWSPDTS++RSKMLYASSKDRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMSFDIIKAR 138
           LQATDPSEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of Cp4.1LG03g16770 vs. TAIR10
Match: AT5G52360.1 (AT5G52360.1 actin depolymerizing factor 10)

HSP 1 Score: 214.2 bits (544), Expect = 5.3e-56
Identity = 106/139 (76.26%), Postives = 121/139 (87.05%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MAN++SGMAV DECKLKFL+LK KR YRFI+F+ID   QQV+VEK+G   E Y DFT  +
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDG--QQVVVEKLGSPQENYDDFTNYL 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           P NECRYAV+DFDFTT EN QKSKI+FIAWSPD+S++R KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMS DIIK+RAL
Sbjct: 121 LQATDPSEMSLDIIKSRAL 137

[Close]
BLAST of Cp4.1LG03g16770 vs. TAIR10
Match: AT5G59890.1 (AT5G59890.1 actin depolymerizing factor 4)

HSP 1 Score: 214.2 bits (544), Expect = 5.3e-56
Identity = 100/137 (72.99%), Postives = 122/137 (89.05%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MAN++SGMAVHD+CKL+FL+LK KR +RFIV+KI+EK +QV+VEKVG    TY DF AS+
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PA+ECRYA++DFDF T ENCQKSKI+FIAW PD +K+RSKM+YASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKAR 138
           LQATDP+EM  D++K+R
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]
BLAST of Cp4.1LG03g16770 vs. NCBI nr
Match: gi|659075277|ref|XP_008438059.1| (PREDICTED: actin-depolymerizing factor 7-like [Cucumis melo])

HSP 1 Score: 260.0 bits (663), Expect = 2.4e-66
Identity = 128/139 (92.09%), Postives = 135/139 (97.12%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANSSSGMAVHDECKLKFLDLK KRKYRFIVFKI+EK+QQV VEKVGG DETY DFTASI
Sbjct: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASI 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAV+DFDFTT+ENCQKSKIYFIAWSPD+S+IRSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMSFDIIK+RAL
Sbjct: 121 LQATDPSEMSFDIIKSRAL 139

[Close]
BLAST of Cp4.1LG03g16770 vs. NCBI nr
Match: gi|778677238|ref|XP_011650757.1| (PREDICTED: actin-depolymerizing factor 7-like [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 5.8e-65
Identity = 125/139 (89.93%), Postives = 135/139 (97.12%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANSSSGMAVHDECKLKFLDLK KRKYRFIVFKI+EK+QQV V+KVGG DETY DFTASI
Sbjct: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAV+D++FTT+ENCQKSKIYFIAWSPD+S+IRSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMSFDIIK+RAL
Sbjct: 121 LQATDPSEMSFDIIKSRAL 139

[Close]
BLAST of Cp4.1LG03g16770 vs. NCBI nr
Match: gi|225454162|ref|XP_002271495.1| (PREDICTED: actin-depolymerizing factor 10 [Vitis vinifera])

HSP 1 Score: 248.8 bits (634), Expect = 5.5e-63
Identity = 121/139 (87.05%), Postives = 131/139 (94.24%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANS+SGMAVHDECKLKFL+LK KR +RFIVFKIDE+IQQVMVEK+G  DETY DFT S+
Sbjct: 1   MANSASGMAVHDECKLKFLELKAKRNHRFIVFKIDERIQQVMVEKLGSPDETYEDFTNSL 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PA+ECRYAVFDFDFTTDENCQKSKI+FIAWSPDTS++RSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMS DIIK RAL
Sbjct: 121 LQATDPSEMSMDIIKGRAL 139

[Close]
BLAST of Cp4.1LG03g16770 vs. NCBI nr
Match: gi|297745256|emb|CBI40336.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 248.8 bits (634), Expect = 5.5e-63
Identity = 121/139 (87.05%), Postives = 131/139 (94.24%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANS+SGMAVHDECKLKFL+LK KR +RFIVFKIDE+IQQVMVEK+G  DETY DFT S+
Sbjct: 118 MANSASGMAVHDECKLKFLELKAKRNHRFIVFKIDERIQQVMVEKLGSPDETYEDFTNSL 177

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PA+ECRYAVFDFDFTTDENCQKSKI+FIAWSPDTS++RSKMLYASSKDRFKRELDGIQVE
Sbjct: 178 PADECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 237

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMS DIIK RAL
Sbjct: 238 LQATDPSEMSMDIIKGRAL 256

[Close]
BLAST of Cp4.1LG03g16770 vs. NCBI nr
Match: gi|719963466|ref|XP_010249803.1| (PREDICTED: actin-depolymerizing factor [Nelumbo nucifera])

HSP 1 Score: 246.5 bits (628), Expect = 2.7e-62
Identity = 119/139 (85.61%), Postives = 131/139 (94.24%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKTKRKYRFIVFKIDEKIQQVMVEKVGGHDETYADFTASI 60
           MANS+SGMAV+D+CKLKFL+LK KR YRFIVFKIDEKIQQVMVE++G  +E+Y DFTA +
Sbjct: 1   MANSASGMAVNDDCKLKFLELKAKRNYRFIVFKIDEKIQQVMVERLGNPEESYEDFTACL 60

Query: 61  PANECRYAVFDFDFTTDENCQKSKIYFIAWSPDTSKIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAVFDFDFTTDENCQKSKI+FIAWSPDTSK+RSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKARAL 140
           LQATDPSEMS DIIK RA+
Sbjct: 121 LQATDPSEMSMDIIKGRAI 139

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g16770 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ADF7_ARATH1.5e-6082.01Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1[more]
ADF10_ARATH3.3e-6081.75Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1[more]
ADF6_ORYSJ3.3e-6080.58Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2[more]
ADF_LILLO5.7e-6080.43Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1[more]
ADF8_ARATH1.6e-5979.56Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2[more]
BLAST of Cp4.1LG03g16770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6A2_CUCSA4.1e-6589.93Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122480 PE=3 SV=1[more]
A5AW33_VITVI3.8e-6387.05Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012391 PE=3 SV=1[more]
D7UC71_VITVI3.8e-6387.05Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g03040 PE=3 SV=... [more]
A0A059CIQ7_EUCGR1.2e-6186.33Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02275 PE=3 SV=1[more]
M5XE35_PRUPE2.1e-6184.17Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013108mg PE=3 SV=1[more]
BLAST of Cp4.1LG03g16770 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25590.18.4e-6282.01 actin depolymerizing factor 7[more]
AT1G01750.11.9e-6181.75 actin depolymerizing factor 11[more]
AT4G00680.19.3e-6179.56 actin depolymerizing factor 8[more]
AT5G52360.15.3e-5676.26 actin depolymerizing factor 10[more]
AT5G59890.15.3e-5672.99 actin depolymerizing factor 4[more]
BLAST of Cp4.1LG03g16770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075277|ref|XP_008438059.1|2.4e-6692.09PREDICTED: actin-depolymerizing factor 7-like [Cucumis melo][more]
gi|778677238|ref|XP_011650757.1|5.8e-6589.93PREDICTED: actin-depolymerizing factor 7-like [Cucumis sativus][more]
gi|225454162|ref|XP_002271495.1|5.5e-6387.05PREDICTED: actin-depolymerizing factor 10 [Vitis vinifera][more]
gi|297745256|emb|CBI40336.3|5.5e-6387.05unnamed protein product [Vitis vinifera][more]
gi|719963466|ref|XP_010249803.1|2.7e-6285.61PREDICTED: actin-depolymerizing factor [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: INTERPRO
TermDefinition
IPR017904ADF/Cofilin
IPR002108ADF-H
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005884 actin filament
cellular_component GO:0005622 intracellular
molecular_function GO:0003779 actin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g16770.1Cp4.1LG03g16770.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 14..136
score: 8.8
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 12..139
score: 1.4
IPR002108Actin-depolymerising factor homology domainPROFILEPS51263ADF_Hcoord: 5..139
score: 38
IPR017904ADF/Cofilin/DestrinPANTHERPTHR11913COFILIN-RELATEDcoord: 1..138
score: 1.2E
NoneNo IPR availablePANTHERPTHR11913:SF30ACTIN-DEPOLYMERIZING FACTOR 10-RELATEDcoord: 1..138
score: 1.2E
NoneNo IPR availableunknownSSF55753Actin depolymerizing proteinscoord: 2..137
score: 3.87

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g16770Cucsa.258290Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g16770CmaCh02G010680Cucurbita maxima (Rimu)cmacpeB639
Cp4.1LG03g16770CmaCh06G010610Cucurbita maxima (Rimu)cmacpeB833
Cp4.1LG03g16770CmaCh14G020300Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g16770CmoCh02G010860Cucurbita moschata (Rifu)cmocpeB589
Cp4.1LG03g16770CmoCh06G010820Cucurbita moschata (Rifu)cmocpeB784
Cp4.1LG03g16770CmoCh14G020920Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g16770Cla006177Watermelon (97103) v1cpewmB612
Cp4.1LG03g16770Cla021242Watermelon (97103) v1cpewmB613
Cp4.1LG03g16770Csa3G122480Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g16770MELO3C006118Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g16770ClCG05G008060Watermelon (Charleston Gray)cpewcgB556
Cp4.1LG03g16770ClCG05G001620Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g16770CSPI03G08860Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g16770Lsi05G020310Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g16770MELO3C006118.2Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g16770CsaV3_3G009000Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g16770Bhi01G000263Wax gourdcpewgoB0788
Cp4.1LG03g16770Carg24638Silver-seed gourdcarcpeB0536
Cp4.1LG03g16770Carg21008Silver-seed gourdcarcpeB0691
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g16770Cp4.1LG09g00850Cucurbita pepo (Zucchini)cpecpeB052
Cp4.1LG03g16770Cp4.1LG05g06430Cucurbita pepo (Zucchini)cpecpeB479
Cp4.1LG03g16770Cp4.1LG08g01220Cucurbita pepo (Zucchini)cpecpeB488
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g16770Silver-seed gourdcarcpeB0922
Cp4.1LG03g16770Wax gourdcpewgoB0774
Cp4.1LG03g16770Cucurbita pepo (Zucchini)cpecpeB242
Cp4.1LG03g16770Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG03g16770Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g16770Cucumber (Gy14) v2cgybcpeB406