CmaCh06G010610 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G010610
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Actin depolymerizing factor 8
Location	Cma_Chr06 : 7132768 .. 7135318 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTGATTCGAATCTCAAACAAGTGTTCTTGCGTTGAGATATTTGATCAACAAGAATCATTCAAGCTAGACATGATCGATCTTGCTTATGGAGTGATTCGAATCTTAAACAATGTTCTTGCCTTTGAGACACATTCGATCAACAAGGTATTCCGAATCTTACTCCTCTTGTAATGATTTCCACATATCACTTGCAATCTCGTCCTTGGCAATAAGGTAGATATTGTAGAAAATCTCCTTAATTATCTAATGGAAAAGGCTGGAATAGAGAATATTCCATCAGTTAGTTGAACTGGGGAGCTTGTTTTCTCTGTCAAGAGTCTCTCTTTCTTTCTTTTTATAGGAAACAAACCATTCATTGATGAAATGAAATTACAAAAGGATGATCCTATCCAGTGGAATCTTTCTTTCTTTCTTTCTTTCTTGGGTGTTCAAACAAAAAGTAAACCCATCTTTTACCAACTGGATTGAATTATTTCTTCATGTGTACTATGTTCTAACTTGAATACATTTTTAGAATTACAATGGATTAGTGTTTTTCAACTTGAACTGGATATTGGTAATAGCTGCATTTGCAGATTCTTACGGCTTCCACATTTGAAGAAAACCCAGTGAAATCATTGCACTACTTGCACTGAAGTAATGCATTGATTGAGTGATAAAAAAAAAATTGAAGTAATTTATTCGAAGGATTTATGATTTATGTTGGCTCGTGTTATTTTGTGATAAAAAAAAAATTGAAGTAATTTATTCGAAGGATTTATGATTTATGTTGGCTCGTGTTATTTTTTTATTTTTCTTTTTAAGAGGTCAGGAGTAGTATTCTAACTCTTTAACATGTCTGGTAGAGTCTTAATTAATTGAGTTATACTCAAGTTGACGTGAATTCTTGTGTTCATCTCCCGTATTTGAGATTGAGTTCCACTCTCAAATTTATTGATTTGATCACTTCAACCGTGCTATTCTCTACGATGATTTCGTGCACTATTAAATTTATTAGGTTCATCCTTAAACTTGAAAAAAAGTTCAAAAATATCCCAATACCAAATAATGGATGGGAAAGAGATGGAAATTGATAATAATTTGTTTCAAAAATATCCTAATACTCTTAAACATTTTTAAAATTTTAAAAATANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTACCTTAAAGAAAAATATATATGTATTTTCATCCTTATAGCGACGGTAAGAATATTTTTTAATCATGGTATTATCACATTATTATTATTTTTTTTTATTTCAGGCTAAGCCCCTCAATTTTATTTATTTTCCTCTATCTCCCCCTCTTTTTAAGGTGCAGATTAAAGACATGTTCTGGGAGGGGCTATTGTGCAACAGAAGCAGCGAGGTATGTGGCCAACCAAACAAAGGGAAGAAGACATGGTCAAAATAAATAAAATCCCAACATTGACCAAATATAGAACAACATTAAGAGCACCTAAATCACACCCCTTTTACGTGGAGGACATGTCCCTTACAATGCTGGTCACACACAACACAAAGGCTAAGTAAGGACACAATTTGGGATACCCAAAATAAAATAACTCTTCATTTCCTCCTTCANAACGATCCTCCTCTCGATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAACAAACCCACAAATCTCTGACATTATGGTATGTTTCAAACTCGTTCTTTATTTGATTTCTTCTTAATAATTGTATTTTCACATGTGTTTTGCATTTTTTGATAGGCAAATTCAGCATCAGGCATGGCAGTTCACGACGACTGCAAGCTAAAGTTTCTGGATCTTAAAGCCAAAAGAAAGTTCAGGTTCATCGTGTTCAAGATCGATGAGAATATCCAGCAGGTGATGGTCGAGAGAGTCGGTGGTCACGATGAAACCTACAACAACTTCCTCGCAGCCATCCCTGCTAATGAATGTCGTTACGCTGTCTATGATTTCGACTTCACAACCGACGAGAATTGTCAAAAGAGCAAGATCTTCTTTATTGCCTGGTATTATCCCCACATATTTATCATACTATTTAAATCACTAAATTAGATCGTCTTGATGTGAACTTTTAGATTGATTTACTAACTTACGAACCTTTTTTTTTTTCCTTAAAACTTTTATAATTTGTTTATGTAGGTCACCCGACTCGTCGAGAATAAGAAGTAAAATGTTGTATGCGAGCTCGAGGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAGTTACAGGCAACAGATCCCAGTGAGATGAGCATTGATATCATTAAAGCAAGAGCTATCTGAATTCCCCCACAAACAAAAGTAAAAAAAAATAATTTTTTTTTTTTACTGCAACCAAACATTATTTTTTACCTTACAGTTTTACCCCACTCTCCTTATTTGTCAAAAGTCATTAGTTTTCCTTTTCTTTTGGGTCAATTCTCATATTGACACGTGTCATTTATTTATGAATTTTTATATTAAATTTAATAAACTTACTTCC

mRNA sequence

GAGTGATTCGAATCTCAAACAAGTGTTCTTGCGTTGAGATATTTGATCAACAAGAATCATTCAAGCTAGACATGATCGATCTTGCTTATGGAGTGATTCGAATCTTAAACAATGTTCTTGCCTTTGAGACACATTCGATCAACAAGATTAAAGACATGTTCTGGGAGGGGCTATTGTGCAACAGAAGCAGCGAGGTATGTGGCCAACCAAACAAAGGGAAGAAGACATGGTCAAAATAAATAAAATCCCAACATTGACCAAATATAGAACAACATTAAGAGCACCTAAATCACACCCCTTTTACGTGGAGGACATGTCCCTTACAATGCTGGTCACACACAACACAAAGGCTAAGTAAGGACACAATTTGGGATACCCAAAATAAAATAACTCTTCATTTCCTCCTTCANAACGATCCTCCTCTCGATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAACAAACCCACAAATCTCTGACATTATGGCAAATTCAGCATCAGGCATGGCAGTTCACGACGACTGCAAGCTAAAGTTTCTGGATCTTAAAGCCAAAAGAAAGTTCAGGTTCATCGTGTTCAAGATCGATGAGAATATCCAGCAGGTGATGGTCGAGAGAGTCGGTGGTCACGATGAAACCTACAACAACTTCCTCGCAGCCATCCCTGCTAATGAATGTCGTTACGCTGTCTATGATTTCGACTTCACAACCGACGAGAATTGTCAAAAGAGCAAGATCTTCTTTATTGCCTGGTCACCCGACTCGTCGAGAATAAGAAGTAAAATGTTGTATGCGAGCTCGAGGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAGTTACAGGCAACAGATCCCAGTGAGATGAGCATTGATATCATTAAAGCAAGAGCTATCTGAATTCCCCCACAAACAAAAGTAAAAAAAAATAATTTTTTTTTTTTACTGCAACCAAACATTATTTTTTACCTTACAGTTTTACCCCACTCTCCTTATTTGTCAAAAGTCATTAGTTTTCCTTTTCTTTTGGGTCAATTCTCATATTGACACGTGTCATTTATTTATGAATTTTTATATTAAATTTAATAAACTTACTTCC

Coding sequence (CDS)

ATGGCAAATTCAGCATCAGGCATGGCAGTTCACGACGACTGCAAGCTAAAGTTTCTGGATCTTAAAGCCAAAAGAAAGTTCAGGTTCATCGTGTTCAAGATCGATGAGAATATCCAGCAGGTGATGGTCGAGAGAGTCGGTGGTCACGATGAAACCTACAACAACTTCCTCGCAGCCATCCCTGCTAATGAATGTCGTTACGCTGTCTATGATTTCGACTTCACAACCGACGAGAATTGTCAAAAGAGCAAGATCTTCTTTATTGCCTGGTCACCCGACTCGTCGAGAATAAGAAGTAAAATGTTGTATGCGAGCTCGAGGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAGTTACAGGCAACAGATCCCAGTGAGATGAGCATTGATATCATTAAAGCAAGAGCTATCTGA

Protein sequence

MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAIPANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI

Homology

[Close]

BLAST of CmaCh06G010610 vs. Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 4.8e-59
Identity = 108/138 (78.26%), Postives = 127/138 (92.03%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANS+SGMAV D+CKLKF++LKAKR FRFIVFKI+E +QQV VER+G  +E+Y++F   +
Sbjct: 1   MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           P NECRYAV+DFDF TDENCQKSKIFFI+WSPD+SR+RSKMLYAS++DRFKRELDGIQVE
Sbjct: 61  PPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARA 139
           LQATDPSEMS+DIIKARA
Sbjct: 121 LQATDPSEMSMDIIKARA 138

[Close]

BLAST of CmaCh06G010610 vs. Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 8.2e-59
Identity = 107/139 (76.98%), Postives = 130/139 (93.53%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           M+NSASGMAV D+CKLKFL+LKAKR FRFIVFKI+E +QQV+V+R+G   E+Y++F A +
Sbjct: 1   MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYAV+DFDF TDENCQKSKIFFI+W+PD+SR+RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DI+K+RA+
Sbjct: 121 LQATDPSEMSMDIVKSRAL 139

[Close]

BLAST of CmaCh06G010610 vs. Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-58
Identity = 108/137 (78.83%), Postives = 124/137 (90.51%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANSASGM V D+CKLKFL+LKAKR +RFIVFKIDE  QQVM++++G  +ETY +F  +I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           P +ECRYAVYD+DFTT ENCQKSKIFFIAWSPD+SR+RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKAR 138
           LQATDPSEMS+DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmaCh06G010610 vs. Swiss-Prot
Match: ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2)

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-58
Identity = 107/139 (76.98%), Postives = 128/139 (92.09%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANSASGMAV D+CKLKF +LK+KR FRFI FKIDE  QQV+V+R+G   +TY++F A++
Sbjct: 1   MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYAV+DFDF TDENCQKSKIFFI+WSPD+S++RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DI+KARA+
Sbjct: 121 LQATDPSEMSMDIVKARAL 139

[Close]

BLAST of CmaCh06G010610 vs. Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 225.7 bits (574), Expect = 3.1e-58
Identity = 105/137 (76.64%), Postives = 127/137 (92.70%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANSASGM V+D+CK+KFL+LKAKR +RFIVFKIDE  QQV +E++G  +ETY++F ++I
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           P +ECRYAVYDFDFTT++NCQKSKIFFIAWSPD+SR+RSKMLYASS+DRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMSIDIIKAR 138
           LQATDPSEMS+DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmaCh06G010610 vs. TrEMBL
Match: A0A0A0L6A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122480 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 7.2e-62
Identity = 117/139 (84.17%), Postives = 134/139 (96.40%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANS+SGMAVHD+CKLKFLDLKAKRK+RFIVFKI+E +QQV V++VGG DETY++F A+I
Sbjct: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PANECRYAVYD++FTT+ENCQKSKI+FIAWSPDSSRIRSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS DIIK+RA+
Sbjct: 121 LQATDPSEMSFDIIKSRAL 139

[Close]

BLAST of CmaCh06G010610 vs. TrEMBL
Match: M5XE35_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013108mg PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.7e-61
Identity = 116/139 (83.45%), Postives = 133/139 (95.68%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANSASGMAVHDDCKLKFL+LKAKR  RFIVFKI+E IQQV+VE+VGG DE+Y++F A++
Sbjct: 1   MANSASGMAVHDDCKLKFLELKAKRNHRFIVFKIEEKIQQVIVEKVGGPDESYDDFAASM 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYAVYDFDFTT+ENCQKSKIFFIAW+PD+SR+RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFTTNENCQKSKIFFIAWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DIIK RA+
Sbjct: 121 LQATDPSEMSLDIIKGRAL 139

[Close]

BLAST of CmaCh06G010610 vs. TrEMBL
Match: A5AW33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012391 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 7.9e-61
Identity = 116/139 (83.45%), Postives = 130/139 (93.53%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANSASGMAVHD+CKLKFL+LKAKR  RFIVFKIDE IQQVMVE++G  DETY +F  ++
Sbjct: 1   MANSASGMAVHDECKLKFLELKAKRNHRFIVFKIDERIQQVMVEKLGSPDETYEDFTNSL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYAV+DFDFTTDENCQKSKIFFIAWSPD+SR+RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PADECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DIIK RA+
Sbjct: 121 LQATDPSEMSMDIIKGRAL 139

[Close]

BLAST of CmaCh06G010610 vs. TrEMBL
Match: D7UC71_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g03040 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 7.9e-61
Identity = 116/139 (83.45%), Postives = 130/139 (93.53%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANSASGMAVHD+CKLKFL+LKAKR  RFIVFKIDE IQQVMVE++G  DETY +F  ++
Sbjct: 118 MANSASGMAVHDECKLKFLELKAKRNHRFIVFKIDERIQQVMVEKLGSPDETYEDFTNSL 177

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYAV+DFDFTTDENCQKSKIFFIAWSPD+SR+RSKMLYASS+DRFKRELDGIQVE
Sbjct: 178 PADECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 237

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DIIK RA+
Sbjct: 238 LQATDPSEMSMDIIKGRAL 256

[Close]

BLAST of CmaCh06G010610 vs. TrEMBL
Match: A0A059CIQ7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02275 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 5.1e-60
Identity = 116/139 (83.45%), Postives = 129/139 (92.81%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANSASGMAV+D+CKLKFL+LKAKR  RFIVFKIDE IQQV VE+VG  +ETY++F A +
Sbjct: 1   MANSASGMAVNDECKLKFLELKAKRNHRFIVFKIDEKIQQVSVEKVGSPEETYDDFTACM 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PANECRYAV+DFDF TDENCQKSKIFFIAWSPD+SR+RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PANECRYAVFDFDFITDENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMSIDIIK RA+
Sbjct: 121 LQATDPSEMSIDIIKGRAL 139

[Close]

BLAST of CmaCh06G010610 vs. TAIR10
Match: AT1G01750.1 (AT1G01750.1 actin depolymerizing factor 11)

HSP 1 Score: 227.3 bits (578), Expect = 6.0e-60
Identity = 108/137 (78.83%), Postives = 124/137 (90.51%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANSASGM V D+CKLKFL+LKAKR +RFIVFKIDE  QQVM++++G  +ETY +F  +I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           P +ECRYAVYD+DFTT ENCQKSKIFFIAWSPD+SR+RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKAR 138
           LQATDPSEMS+DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmaCh06G010610 vs. TAIR10
Match: AT4G00680.1 (AT4G00680.1 actin depolymerizing factor 8)

HSP 1 Score: 225.7 bits (574), Expect = 1.7e-59
Identity = 105/137 (76.64%), Postives = 127/137 (92.70%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANSASGM V+D+CK+KFL+LKAKR +RFIVFKIDE  QQV +E++G  +ETY++F ++I
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           P +ECRYAVYDFDFTT++NCQKSKIFFIAWSPD+SR+RSKMLYASS+DRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMSIDIIKAR 138
           LQATDPSEMS+DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmaCh06G010610 vs. TAIR10
Match: AT4G25590.1 (AT4G25590.1 actin depolymerizing factor 7)

HSP 1 Score: 225.3 bits (573), Expect = 2.3e-59
Identity = 108/139 (77.70%), Postives = 128/139 (92.09%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MAN+ASGMAV D+CKLKFL+LK+KR +RFI+F+ID   QQV+VE++G  DETY++F A++
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDG--QQVVVEKLGNPDETYDDFTASL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PANECRYAV+DFDF TDENCQKSKIFFIAWSPDSSR+R KM+YASS+DRFKRELDGIQVE
Sbjct: 61  PANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS DIIK+RA+
Sbjct: 121 LQATDPSEMSFDIIKSRAL 137

[Close]

BLAST of CmaCh06G010610 vs. TAIR10
Match: AT5G52360.1 (AT5G52360.1 actin depolymerizing factor 10)

HSP 1 Score: 214.5 bits (545), Expect = 4.0e-56
Identity = 105/139 (75.54%), Postives = 123/139 (88.49%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MAN+ASGMAV D+CKLKFL+LKAKR +RFI+F+ID   QQV+VE++G   E Y++F   +
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDG--QQVVVEKLGSPQENYDDFTNYL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           P NECRYAVYDFDFTT EN QKSKIFFIAWSPDSSR+R KM+YASS+DRFKRELDGIQVE
Sbjct: 61  PPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DIIK+RA+
Sbjct: 121 LQATDPSEMSLDIIKSRAL 137

[Close]

BLAST of CmaCh06G010610 vs. TAIR10
Match: AT5G59890.1 (AT5G59890.1 actin depolymerizing factor 4)

HSP 1 Score: 212.6 bits (540), Expect = 1.5e-55
Identity = 99/137 (72.26%), Postives = 122/137 (89.05%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MAN+ASGMAVHDDCKL+FL+LKAKR  RFIV+KI+E  +QV+VE+VG    TY +F A++
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYA+YDFDF T ENCQKSKIFFIAW PD +++RSKM+YASS+DRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKAR 138
           LQATDP+EM +D++K+R
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of CmaCh06G010610 vs. NCBI nr
Match: gi|659075277|ref|XP_008438059.1| (PREDICTED: actin-depolymerizing factor 7-like [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 4.2e-63
Identity = 120/139 (86.33%), Postives = 134/139 (96.40%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANS+SGMAVHD+CKLKFLDLKAKRK+RFIVFKI+E +QQV VE+VGG DETY++F A+I
Sbjct: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PANECRYAVYDFDFTT+ENCQKSKI+FIAWSPDSSRIRSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS DIIK+RA+
Sbjct: 121 LQATDPSEMSFDIIKSRAL 139

[Close]

BLAST of CmaCh06G010610 vs. NCBI nr
Match: gi|778677238|ref|XP_011650757.1| (PREDICTED: actin-depolymerizing factor 7-like [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 1.0e-61
Identity = 117/139 (84.17%), Postives = 134/139 (96.40%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANS+SGMAVHD+CKLKFLDLKAKRK+RFIVFKI+E +QQV V++VGG DETY++F A+I
Sbjct: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PANECRYAVYD++FTT+ENCQKSKI+FIAWSPDSSRIRSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS DIIK+RA+
Sbjct: 121 LQATDPSEMSFDIIKSRAL 139

[Close]

BLAST of CmaCh06G010610 vs. NCBI nr
Match: gi|719963466|ref|XP_010249803.1| (PREDICTED: actin-depolymerizing factor [Nelumbo nucifera])

HSP 1 Score: 243.0 bits (619), Expect = 3.0e-61
Identity = 117/139 (84.17%), Postives = 131/139 (94.24%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANSASGMAV+DDCKLKFL+LKAKR +RFIVFKIDE IQQVMVER+G  +E+Y +F A +
Sbjct: 1   MANSASGMAVNDDCKLKFLELKAKRNYRFIVFKIDEKIQQVMVERLGNPEESYEDFTACL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PANECRYAV+DFDFTTDENCQKSKIFFIAWSPD+S++RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DIIK RAI
Sbjct: 121 LQATDPSEMSMDIIKGRAI 139

[Close]

BLAST of CmaCh06G010610 vs. NCBI nr
Match: gi|596010507|ref|XP_007218574.1| (hypothetical protein PRUPE_ppa013108mg [Prunus persica])

HSP 1 Score: 242.7 bits (618), Expect = 3.9e-61
Identity = 116/139 (83.45%), Postives = 133/139 (95.68%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANSASGMAVHDDCKLKFL+LKAKR  RFIVFKI+E IQQV+VE+VGG DE+Y++F A++
Sbjct: 1   MANSASGMAVHDDCKLKFLELKAKRNHRFIVFKIEEKIQQVIVEKVGGPDESYDDFAASM 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYAVYDFDFTT+ENCQKSKIFFIAW+PD+SR+RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFTTNENCQKSKIFFIAWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DIIK RA+
Sbjct: 121 LQATDPSEMSLDIIKGRAL 139

[Close]

BLAST of CmaCh06G010610 vs. NCBI nr
Match: gi|225454162|ref|XP_002271495.1| (PREDICTED: actin-depolymerizing factor 10 [Vitis vinifera])

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-60
Identity = 116/139 (83.45%), Postives = 130/139 (93.53%), Query Frame = 1


Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60
           MANSASGMAVHD+CKLKFL+LKAKR  RFIVFKIDE IQQVMVE++G  DETY +F  ++
Sbjct: 1   MANSASGMAVHDECKLKFLELKAKRNHRFIVFKIDERIQQVMVEKLGSPDETYEDFTNSL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYAV+DFDFTTDENCQKSKIFFIAWSPD+SR+RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PADECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DIIK RA+
Sbjct: 121 LQATDPSEMSMDIIKGRAL 139

The following BLAST results are available for this feature:

BLAST of CmaCh06G010610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ADF_LILLO	4.8e-59	78.26	Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1	[more]
ADF1_ORYSJ	8.2e-59	76.98	Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1	[more]
ADF10_ARATH	1.1e-58	78.83	Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1	[more]
ADF6_ORYSJ	2.4e-58	76.98	Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2	[more]
ADF8_ARATH	3.1e-58	76.64	Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2	[more]

BLAST of CmaCh06G010610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6A2_CUCSA	7.2e-62	84.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122480 PE=3 SV=1	[more]
M5XE35_PRUPE	2.7e-61	83.45	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013108mg PE=3 SV=1	[more]
A5AW33_VITVI	7.9e-61	83.45	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012391 PE=3 SV=1	[more]
D7UC71_VITVI	7.9e-61	83.45	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g03040 PE=3 SV=...	[more]
A0A059CIQ7_EUCGR	5.1e-60	83.45	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02275 PE=3 SV=1	[more]

BLAST of CmaCh06G010610 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01750.1	6.0e-60	78.83	actin depolymerizing factor 11	[more]
AT4G00680.1	1.7e-59	76.64	actin depolymerizing factor 8	[more]
AT4G25590.1	2.3e-59	77.70	actin depolymerizing factor 7	[more]
AT5G52360.1	4.0e-56	75.54	actin depolymerizing factor 10	[more]
AT5G59890.1	1.5e-55	72.26	actin depolymerizing factor 4	[more]

BLAST of CmaCh06G010610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075277\|ref\|XP_008438059.1\|	4.2e-63	86.33	PREDICTED: actin-depolymerizing factor 7-like [Cucumis melo]	[more]
gi\|778677238\|ref\|XP_011650757.1\|	1.0e-61	84.17	PREDICTED: actin-depolymerizing factor 7-like [Cucumis sativus]	[more]
gi\|719963466\|ref\|XP_010249803.1\|	3.0e-61	84.17	PREDICTED: actin-depolymerizing factor [Nelumbo nucifera]	[more]
gi\|596010507\|ref\|XP_007218574.1\|	3.9e-61	83.45	hypothetical protein PRUPE_ppa013108mg [Prunus persica]	[more]
gi\|225454162\|ref\|XP_002271495.1\|	1.1e-60	83.45	PREDICTED: actin-depolymerizing factor 10 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002108	ADF-H
IPR017904	ADF/Cofilin

Vocabulary: **Molecular Function**
Term	Definition
GO:0003779	actin binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0015629	actin cytoskeleton

Vocabulary: **Biological Process**
Term	Definition
GO:0030042	actin filament depolymerization

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003779	actin binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G010610.1	CmaCh06G010610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..135 score: 1.9
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 12..139 score: 1.6
IPR002108	Actin-depolymerising factor homology domain	PROFILE	PS51263	ADF_H	coord: 5..139 score: 37
IPR017904	ADF/Cofilin/Destrin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..138 score: 3.1E
None	No IPR available	PANTHER	PTHR11913:SF30	ACTIN-DEPOLYMERIZING FACTOR 10-RELATED	coord: 1..138 score: 3.1E
None	No IPR available	unknown	SSF55753	Actin depolymerizing proteins	coord: 2..137 score: 1.75

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh06G010610	Cucsa.258290	Cucumber (Gy14) v1	cgycmaB0723
CmaCh06G010610	Cla021242	Watermelon (97103) v1	cmawmB802
CmaCh06G010610	Csa3G122480	Cucumber (Chinese Long) v2	cmacuB828
CmaCh06G010610	MELO3C006118	Melon (DHL92) v3.5.1	cmameB769
CmaCh06G010610	ClCG05G001620	Watermelon (Charleston Gray)	cmawcgB740
CmaCh06G010610	CSPI03G08860	Wild cucumber (PI 183967)	cmacpiB841
CmaCh06G010610	CmoCh14G020920	Cucurbita moschata (Rifu)	cmacmoB794
CmaCh06G010610	CmoCh06G010820	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G010610	Lsi05G020310	Bottle gourd (USVL1VR-Ls)	cmalsiB758
CmaCh06G010610	Cp4.1LG03g16770	Cucurbita pepo (Zucchini)	cmacpeB833
CmaCh06G010610	Cp4.1LG08g01220	Cucurbita pepo (Zucchini)	cmacpeB854
CmaCh06G010610	MELO3C006118.2	Melon (DHL92) v3.6.1	cmamedB872
CmaCh06G010610	CsaV3_3G009000	Cucumber (Chinese Long) v3	cmacucB0979
CmaCh06G010610	Cla97C05G082010	Watermelon (97103) v2	cmawmbB861
CmaCh06G010610	Bhi01G000263	Wax gourd	cmawgoB1019
CmaCh06G010610	Carg24638	Silver-seed gourd	carcmaB0535
CmaCh06G010610	Carg21008	Silver-seed gourd	carcmaB0684

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh06G010610	CmaCh14G020300	Cucurbita maxima (Rimu)	cmacmaB280

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh06G010610	Melon (DHL92) v3.6.1	cmamedB863
CmaCh06G010610	Cucumber (Chinese Long) v3	cmacucB0965
CmaCh06G010610	Cucumber (Gy14) v2	cgybcmaB442