CSPI03G08860 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G08860
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionActin-depolymerizing factor
LocationChr3 : 7339129 .. 7341452 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCAAAATCCATAACTCTCTTACGTGAACCAAATTAACCTTACCAATTACAAGGCTAAGTCAGACAAGACAAGAGCCTTTAGGAGAGAATTTGAGATATCCAAAACAAAAAAAAAAAAAACAAAATCAAAAAACAAAAAACAAAGAAAGCATTTCTCACAACTCAAAACTCTCCTTCCTCTGATCTCAAGAAAAATACCCAAAAAAACAGAAAAAGAAAAGAAAAAACAAAAACAAAAACTTCTCTTTCATTTGAGGGCATCAAATCAGACACTATGGTATGTTTCAAACTTGGGTTGATTTGTTTTGTTTTTCATTTTTTAGATTTGTTTTGAAGGATGTTTTGTTTGCAATTTTGGAAAGGCAAATTCATCATCAGGAATGGCGGTTCATGATGAGTGCAAGCTCAAGTTTTTGGATCTGAAGGCCAAAAGAAAATATAGATTCATAGTGTTCAAGATTGAGGAGAAGATGCAGCAGGTGACCGTCGACAAGGTCGGTGGCCCCGATGAAACCTATGATGATTTCACTGCTTCCATCCCCGCCAATGAGTGTCGTTATGCTGTCTATGATTACAACTTTACAACCAATGAGAATTGTCAGAAGAGCAAGATTTACTTCATTGCCTGGTATCGTCTCCACATATTTATCATCCATTTTTAATATCTCCTTTTGATAACCGTTTTATCTTTTGTTTTTGGATTTTGAGAATTAGACCTATAGATAAAAAAAAAAAAAAAACGATTATTAAACTCAATCAAAACTAGATTTTCTTAGTGGCTTAGATTGAATCACTCAAACACTCACATTAAAACTTTGATGCGGATAAATTCACTACGTTTTTTGAATTTATTGGAACCTTAAATTTTAAATTTTATATTTGATAAATACGTTAATTAAATATATTTTTTTGTATGATTAGATTAATGGTTAAGCATCTATTGAAAATCTTACCAATATATTGAAAAAGTAAATATTAAACATAAAATTGAAATTTTCATAAACAAATGAGATATTTTCAAAAGTTTGATCAAATGGAGAGTTGAATTTTAAAGTTTTTATAATAGCTTTTTTTTTTTCATTTCTTTAATCTAATATTTAGTTAAACTTACACTTTCGTGATCTATAGGTTTTTTCTTTTTGGTTATTACATAATTTCTTTACACAAAATTAGAAGTTTTAAATTAAATTTTTTCTAAATTAAATTTTACTTTATAAAAGTTTTGAAGTTTTGTAGAGTATATCAAATCATTTTAAATTTTGGTTGTAATTTATTGAACACAAAATTAAATATTGTGTGACTTTTAGATACACAATTTAAAGGTTAGAAATTTACCCGTCATTTAAAAAACCCTACAAAACTAAATAGACATAAAATTCAAAGATTCGTTAACATAATTTAATTTGTTAATTAATCTTAGAAAGTTCTATCTTCCTATTAGAAAAAGTTCAATTTTTAGAAATTTTGAACGTTCTAAAGACTTATTTGATGTTCTTAAAAAATCTAAAAAGAAGACAAATAAGAAAAATCTAGACAACAAAATTATATACTATATCTAACTAATAGACATAATTCTATAGTATATGTAACTAATAGATATAGATAGAAGTTTACGAGCATCTATCACTTATAGAAACTAAATTTTGATATATTTTATAAATAGTTTTTTTAGTAGTTTTGTCATTTACAATAGCTTTCTATAAAATCTTTGTAAACGGTGTATGTTGTAGGTCACCAGACTCATCGAGAATAAGAAGTAAAATGTTGTATGCAAGTTCGAAGGATAGATTCAAGAGAGAGTTGGATGGAATTCAAGTCGAATTACAAGCCACAGATCCAAGTGAGATGAGCTTTGACATCATTAAATCAAGAGCTCTCTAAATCCAAATCCAAATCCAAACAAACAAACAAAAAATGAAAATAAAACAATATACTTTCTCATTTCTACCCAAACACTTCTTTTATTTATTTTCTTTTCACCCCTTGTGTTAAATTATTTTATTTTGTTACCCCCTCTTTTTATTTGTCTAAATTTACACTTTTGTGTAGTTTTTCTACGGATTGCTATATGCAATTCATGAGGTTTGAAGTGTATGCTTTTATGCATCCCGACTAATCTCACGAGACAACTCATCTGACCCTACAATGTTTGAGTGTCGGAAGAAAGAATAATTTCTTTCTAATCAAAGTTGTAGAGTGTCATTAATTACTATAGTTTTTGTACTTTTTCGTTTTCATTGTGAATCTTTTGAATTTACATAAATTACTTTAACGAAGAGTTTGTAATGGTATATATATACAAATGTTAAATTATTGCATTTTG

mRNA sequence

ATGGCAAATTCATCATCAGGAATGGCGGTTCATGATGAGTGCAAGCTCAAGTTTTTGGATCTGAAGGCCAAAAGAAAATATAGATTCATAGTGTTCAAGATTGAGGAGAAGATGCAGCAGGTGACCGTCGACAAGGTCGGTGGCCCCGATGAAACCTATGATGATTTCACTGCTTCCATCCCCGCCAATGAGTGTCGTTATGCTGTCTATGATTACAACTTTACAACCAATGAGAATTGTCAGAAGAGCAAGATTTACTTCATTGCCTGGTCACCAGACTCATCGAGAATAAGAAGTAAAATGTTGTATGCAAGTTCGAAGGATAGATTCAAGAGAGAGTTGGATGGAATTCAAGTCGAATTACAAGCCACAGATCCAAGTGAGATGAGCTTTGACATCATTAAATCAAGAGCTCTCTAA

Coding sequence (CDS)

ATGGCAAATTCATCATCAGGAATGGCGGTTCATGATGAGTGCAAGCTCAAGTTTTTGGATCTGAAGGCCAAAAGAAAATATAGATTCATAGTGTTCAAGATTGAGGAGAAGATGCAGCAGGTGACCGTCGACAAGGTCGGTGGCCCCGATGAAACCTATGATGATTTCACTGCTTCCATCCCCGCCAATGAGTGTCGTTATGCTGTCTATGATTACAACTTTACAACCAATGAGAATTGTCAGAAGAGCAAGATTTACTTCATTGCCTGGTCACCAGACTCATCGAGAATAAGAAGTAAAATGTTGTATGCAAGTTCGAAGGATAGATTCAAGAGAGAGTTGGATGGAATTCAAGTCGAATTACAAGCCACAGATCCAAGTGAGATGAGCTTTGACATCATTAAATCAAGAGCTCTCTAA
Homology
[Close]
BLAST of CSPI03G08860 vs. Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.8e-61
Identity = 114/137 (83.21%), Postives = 126/137 (91.97%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MANS+SGM V DECKLKFL+LKAKR YRFIVFKI+EK QQV +DK+G P+ETY+DFT SI
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           P +ECRYAVYDY+FTT ENCQKSKI+FIAWSPD+SR+RSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKSR 138
           LQATDPSEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of CSPI03G08860 vs. Swiss-Prot
Match: ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 8.8e-61
Identity = 113/139 (81.29%), Postives = 130/139 (93.53%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MAN++SGMAV DECKLKFL+LK+KR YRFI+F+I+   QQV V+K+G PDETYDDFTAS+
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDG--QQVVVEKLGNPDETYDDFTASL 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAV+D++F T+ENCQKSKI+FIAWSPDSSR+R KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKSRAL 140
           LQATDPSEMSFDIIKSRAL
Sbjct: 121 LQATDPSEMSFDIIKSRAL 137

[Close]
BLAST of CSPI03G08860 vs. Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-60
Identity = 110/138 (79.71%), Postives = 130/138 (94.20%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MANSSSGMAV DECKLKF++LKAKR +RFIVFKIEEK+QQVTV+++G P+E+YDDFT  +
Sbjct: 1   MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECL 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           P NECRYAV+D++F T+ENCQKSKI+FI+WSPD+SR+RSKMLYAS+KDRFKRELDGIQVE
Sbjct: 61  PPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKSRA 139
           LQATDPSEMS DIIK+RA
Sbjct: 121 LQATDPSEMSMDIIKARA 138

[Close]
BLAST of CSPI03G08860 vs. Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 3.3e-60
Identity = 109/137 (79.56%), Postives = 128/137 (93.43%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MANS+SGM V+DECK+KFL+LKAKR YRFIVFKI+EK QQV ++K+G P+ETYDDFT+SI
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           P +ECRYAVYD++FTT +NCQKSKI+FIAWSPD+SR+RSKMLYASSKDRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMSFDIIKSR 138
           LQATDPSEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of CSPI03G08860 vs. Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.3e-60
Identity = 110/139 (79.14%), Postives = 130/139 (93.53%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           M+NS+SGMAV DECKLKFL+LKAKR +RFIVFKI EK+QQV VD++G P E+YDDFTA +
Sbjct: 1   MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           PA+ECRYAV+D++F T+ENCQKSKI+FI+W+PD+SR+RSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKSRAL 140
           LQATDPSEMS DI+KSRAL
Sbjct: 121 LQATDPSEMSMDIVKSRAL 139

[Close]
BLAST of CSPI03G08860 vs. TrEMBL
Match: A0A0A0L6A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122480 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.2e-72
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI
Sbjct: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKSRAL 140
           LQATDPSEMSFDIIKSRAL
Sbjct: 121 LQATDPSEMSFDIIKSRAL 139

[Close]
BLAST of CSPI03G08860 vs. TrEMBL
Match: M5XE35_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013108mg PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 2.9e-63
Identity = 119/139 (85.61%), Postives = 134/139 (96.40%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MANS+SGMAVHD+CKLKFL+LKAKR +RFIVFKIEEK+QQV V+KVGGPDE+YDDF AS+
Sbjct: 1   MANSASGMAVHDDCKLKFLELKAKRNHRFIVFKIEEKIQQVIVEKVGGPDESYDDFAASM 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           PA+ECRYAVYD++FTTNENCQKSKI+FIAW+PD+SR+RSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFTTNENCQKSKIFFIAWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKSRAL 140
           LQATDPSEMS DIIK RAL
Sbjct: 121 LQATDPSEMSLDIIKGRAL 139

[Close]
BLAST of CSPI03G08860 vs. TrEMBL
Match: V4TSD2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023304mg PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-62
Identity = 117/138 (84.78%), Postives = 135/138 (97.83%), Query Frame = 1 

Query: 2   ANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASIP 61
           ANSSSGMAVHDECKLKFL+LKAKR YRFIVFKIEEK+QQVTV+K+G P+E+Y+DFTAS+P
Sbjct: 3   ANSSSGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLP 62

Query: 62  ANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVEL 121
           A+ECRYAVYD++FTT+ENCQKSKI+F+AWSPD+SRIRSKMLYASSKDRF+RELDG+QVEL
Sbjct: 63  ADECRYAVYDFDFTTDENCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVEL 122

Query: 122 QATDPSEMSFDIIKSRAL 140
           QATDPSEMS DI+KSRAL
Sbjct: 123 QATDPSEMSLDIVKSRAL 140

[Close]
BLAST of CSPI03G08860 vs. TrEMBL
Match: B9RC95_RICCO (Actin depolymerizing factor, putative OS=Ricinus communis GN=RCOM_1686360 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.6e-61
Identity = 115/139 (82.73%), Postives = 134/139 (96.40%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MANSSSGMAV+DECKLKFL+LKAKR YRFIVFKIEEK+QQVTV+K+G P E+Y+DFTAS+
Sbjct: 1   MANSSSGMAVNDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGQPQESYEDFTASL 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAVYD +FTTNEN QKSKI+F+AWSPD+S++RSKMLYASSKDRF+RELDG+QVE
Sbjct: 61  PANECRYAVYDLDFTTNENVQKSKIFFVAWSPDTSKVRSKMLYASSKDRFRRELDGVQVE 120

Query: 121 LQATDPSEMSFDIIKSRAL 140
           LQATDPSEMSFDI+K+RA+
Sbjct: 121 LQATDPSEMSFDIVKARAI 139

[Close]
BLAST of CSPI03G08860 vs. TrEMBL
Match: A0A061G4D9_THECC (Actin depolymerizing factor 8 OS=Theobroma cacao GN=TCM_016232 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.1e-61
Identity = 114/139 (82.01%), Postives = 133/139 (95.68%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MANS+SGMAV+DECK KFL+LKAKR YRFIVFKIEEK+QQV V+K+GGP ++YDD +AS+
Sbjct: 1   MANSASGMAVNDECKRKFLELKAKRSYRFIVFKIEEKIQQVVVEKLGGPSDSYDDLSASL 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAVYD++FTT+ENCQKSKI+FIAWSPD+SR+RSKMLYASSKDRF+RELDG+QVE
Sbjct: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFRRELDGVQVE 120

Query: 121 LQATDPSEMSFDIIKSRAL 140
           LQATDPSEMSFDI+K RAL
Sbjct: 121 LQATDPSEMSFDIVKGRAL 139

[Close]
BLAST of CSPI03G08860 vs. TAIR10
Match: AT1G01750.1 (AT1G01750.1 actin depolymerizing factor 11)

HSP 1 Score: 236.5 bits (602), Expect = 1.0e-62
Identity = 114/137 (83.21%), Postives = 126/137 (91.97%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MANS+SGM V DECKLKFL+LKAKR YRFIVFKI+EK QQV +DK+G P+ETY+DFT SI
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           P +ECRYAVYDY+FTT ENCQKSKI+FIAWSPD+SR+RSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKSR 138
           LQATDPSEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of CSPI03G08860 vs. TAIR10
Match: AT4G25590.1 (AT4G25590.1 actin depolymerizing factor 7)

HSP 1 Score: 234.2 bits (596), Expect = 4.9e-62
Identity = 113/139 (81.29%), Postives = 130/139 (93.53%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MAN++SGMAV DECKLKFL+LK+KR YRFI+F+I+   QQV V+K+G PDETYDDFTAS+
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDG--QQVVVEKLGNPDETYDDFTASL 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAV+D++F T+ENCQKSKI+FIAWSPDSSR+R KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKSRAL 140
           LQATDPSEMSFDIIKSRAL
Sbjct: 121 LQATDPSEMSFDIIKSRAL 137

[Close]
BLAST of CSPI03G08860 vs. TAIR10
Match: AT4G00680.1 (AT4G00680.1 actin depolymerizing factor 8)

HSP 1 Score: 232.3 bits (591), Expect = 1.9e-61
Identity = 109/137 (79.56%), Postives = 128/137 (93.43%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MANS+SGM V+DECK+KFL+LKAKR YRFIVFKI+EK QQV ++K+G P+ETYDDFT+SI
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           P +ECRYAVYD++FTT +NCQKSKI+FIAWSPD+SR+RSKMLYASSKDRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMSFDIIKSR 138
           LQATDPSEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of CSPI03G08860 vs. TAIR10
Match: AT5G52360.1 (AT5G52360.1 actin depolymerizing factor 10)

HSP 1 Score: 221.1 bits (562), Expect = 4.3e-58
Identity = 109/139 (78.42%), Postives = 123/139 (88.49%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MAN++SGMAV DECKLKFL+LKAKR YRFI+F+I+   QQV V+K+G P E YDDFT  +
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDG--QQVVVEKLGSPQENYDDFTNYL 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           P NECRYAVYD++FTT EN QKSKI+FIAWSPDSSR+R KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKSRAL 140
           LQATDPSEMS DIIKSRAL
Sbjct: 121 LQATDPSEMSLDIIKSRAL 137

[Close]
BLAST of CSPI03G08860 vs. TAIR10
Match: AT5G59890.1 (AT5G59890.1 actin depolymerizing factor 4)

HSP 1 Score: 218.4 bits (555), Expect = 2.8e-57
Identity = 101/137 (73.72%), Postives = 124/137 (90.51%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MAN++SGMAVHD+CKL+FL+LKAKR +RFIV+KIEEK +QV V+KVG P  TY+DF AS+
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           PA+ECRYA+YD++F T ENCQKSKI+FIAW PD +++RSKM+YASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKSR 138
           LQATDP+EM  D++KSR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]
BLAST of CSPI03G08860 vs. NCBI nr
Match: gi|778677238|ref|XP_011650757.1| (PREDICTED: actin-depolymerizing factor 7-like [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 1.7e-72
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI
Sbjct: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKSRAL 140
           LQATDPSEMSFDIIKSRAL
Sbjct: 121 LQATDPSEMSFDIIKSRAL 139

[Close]
BLAST of CSPI03G08860 vs. NCBI nr
Match: gi|659075277|ref|XP_008438059.1| (PREDICTED: actin-depolymerizing factor 7-like [Cucumis melo])

HSP 1 Score: 273.1 bits (697), Expect = 2.7e-70
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTV+KVGGPDETYDDFTASI
Sbjct: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASI 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           PANECRYAVYD++FTT ENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKSRAL 140
           LQATDPSEMSFDIIKSRAL
Sbjct: 121 LQATDPSEMSFDIIKSRAL 139

[Close]
BLAST of CSPI03G08860 vs. NCBI nr
Match: gi|596010507|ref|XP_007218574.1| (hypothetical protein PRUPE_ppa013108mg [Prunus persica])

HSP 1 Score: 249.2 bits (635), Expect = 4.2e-63
Identity = 119/139 (85.61%), Postives = 134/139 (96.40%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MANS+SGMAVHD+CKLKFL+LKAKR +RFIVFKIEEK+QQV V+KVGGPDE+YDDF AS+
Sbjct: 1   MANSASGMAVHDDCKLKFLELKAKRNHRFIVFKIEEKIQQVIVEKVGGPDESYDDFAASM 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           PA+ECRYAVYD++FTTNENCQKSKI+FIAW+PD+SR+RSKMLYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFTTNENCQKSKIFFIAWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIIKSRAL 140
           LQATDPSEMS DIIK RAL
Sbjct: 121 LQATDPSEMSLDIIKGRAL 139

[Close]
BLAST of CSPI03G08860 vs. NCBI nr
Match: gi|568845458|ref|XP_006476590.1| (PREDICTED: actin-depolymerizing factor 1 [Citrus sinensis])

HSP 1 Score: 248.1 bits (632), Expect = 9.4e-63
Identity = 117/139 (84.17%), Postives = 136/139 (97.84%), Query Frame = 1 

Query: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60
           MANSSSGMAVHD+CKLKFL+LKAKR YRFIVFKIEEK+QQVTV+K+G P+E+Y+DFTAS+
Sbjct: 1   MANSSSGMAVHDDCKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASL 60

Query: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120
           PA+ECRYAVYD++FTT+ENCQKSKI+F+AWSPD+SRIRSKMLYASSKDRF+RELDG+QVE
Sbjct: 61  PADECRYAVYDFDFTTDENCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVE 120

Query: 121 LQATDPSEMSFDIIKSRAL 140
           LQATDPSEMS DI+KSRAL
Sbjct: 121 LQATDPSEMSLDIVKSRAL 139

[Close]
BLAST of CSPI03G08860 vs. NCBI nr
Match: gi|567894176|ref|XP_006439576.1| (hypothetical protein CICLE_v10023304mg [Citrus clementina])

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-62
Identity = 117/138 (84.78%), Postives = 135/138 (97.83%), Query Frame = 1 

Query: 2   ANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASIP 61
           ANSSSGMAVHDECKLKFL+LKAKR YRFIVFKIEEK+QQVTV+K+G P+E+Y+DFTAS+P
Sbjct: 3   ANSSSGMAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLP 62

Query: 62  ANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVEL 121
           A+ECRYAVYD++FTT+ENCQKSKI+F+AWSPD+SRIRSKMLYASSKDRF+RELDG+QVEL
Sbjct: 63  ADECRYAVYDFDFTTDENCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVEL 122

Query: 122 QATDPSEMSFDIIKSRAL 140
           QATDPSEMS DI+KSRAL
Sbjct: 123 QATDPSEMSLDIVKSRAL 140

The following BLAST results are available for this feature:
BLAST of CSPI03G08860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ADF10_ARATH1.8e-6183.21Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1[more]
ADF7_ARATH8.8e-6181.29Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1[more]
ADF_LILLO1.5e-6079.71Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1[more]
ADF8_ARATH3.3e-6079.56Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2[more]
ADF1_ORYSJ3.3e-6079.14Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1[more]
BLAST of CSPI03G08860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6A2_CUCSA1.2e-72100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122480 PE=3 SV=1[more]
M5XE35_PRUPE2.9e-6385.61Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013108mg PE=3 SV=1[more]
V4TSD2_9ROSI1.1e-6284.78Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023304mg PE=3 SV=1[more]
B9RC95_RICCO1.6e-6182.73Actin depolymerizing factor, putative OS=Ricinus communis GN=RCOM_1686360 PE=3 S... [more]
A0A061G4D9_THECC2.1e-6182.01Actin depolymerizing factor 8 OS=Theobroma cacao GN=TCM_016232 PE=3 SV=1[more]
BLAST of CSPI03G08860 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G01750.11.0e-6283.21 actin depolymerizing factor 11[more]
AT4G25590.14.9e-6281.29 actin depolymerizing factor 7[more]
AT4G00680.11.9e-6179.56 actin depolymerizing factor 8[more]
AT5G52360.14.3e-5878.42 actin depolymerizing factor 10[more]
AT5G59890.12.8e-5773.72 actin depolymerizing factor 4[more]
BLAST of CSPI03G08860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778677238|ref|XP_011650757.1|1.7e-72100.00PREDICTED: actin-depolymerizing factor 7-like [Cucumis sativus][more]
gi|659075277|ref|XP_008438059.1|2.7e-7097.12PREDICTED: actin-depolymerizing factor 7-like [Cucumis melo][more]
gi|596010507|ref|XP_007218574.1|4.2e-6385.61hypothetical protein PRUPE_ppa013108mg [Prunus persica][more]
gi|568845458|ref|XP_006476590.1|9.4e-6384.17PREDICTED: actin-depolymerizing factor 1 [Citrus sinensis][more]
gi|567894176|ref|XP_006439576.1|1.6e-6284.78hypothetical protein CICLE_v10023304mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002108ADF-H
IPR017904ADF/Cofilin
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005622 intracellular
molecular_function GO:0003779 actin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G08860.1CSPI03G08860.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 14..136
score: 1.6
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 12..139
score: 5.4
IPR002108Actin-depolymerising factor homology domainPROFILEPS51263ADF_Hcoord: 5..139
score: 38
IPR017904ADF/Cofilin/DestrinPANTHERPTHR11913COFILIN-RELATEDcoord: 1..138
score: 8.4E
NoneNo IPR availablePANTHERPTHR11913:SF30ACTIN-DEPOLYMERIZING FACTOR 10-RELATEDcoord: 1..138
score: 8.4E
NoneNo IPR availableunknownSSF55753Actin depolymerizing proteinscoord: 2..137
score: 1.22

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G08860Cla006177Watermelon (97103) v1cpiwmB251
CSPI03G08860Cla021242Watermelon (97103) v1cpiwmB231
CSPI03G08860Csa3G122480Cucumber (Chinese Long) v2cpicuB120
CSPI03G08860MELO3C006118Melon (DHL92) v3.5.1cpimeB230
CSPI03G08860MELO3C006910Melon (DHL92) v3.5.1cpimeB249
CSPI03G08860ClCG05G001620Watermelon (Charleston Gray)cpiwcgB226
CSPI03G08860ClCG05G008060Watermelon (Charleston Gray)cpiwcgB246
CSPI03G08860Lsi05G020310Bottle gourd (USVL1VR-Ls)cpilsiB207
CSPI03G08860MELO3C006118.2Melon (DHL92) v3.6.1cpimedB224
CSPI03G08860CsaV3_3G009000Cucumber (Chinese Long) v3cpicucB144
CSPI03G08860Cla97C05G082010Watermelon (97103) v2cpiwmbB209
CSPI03G08860Bhi01G000263Wax gourdcpiwgoB272
CSPI03G08860Cucsa.258290Cucumber (Gy14) v1cgycpiB383
CSPI03G08860CmaCh14G020300Cucurbita maxima (Rimu)cmacpiB255
CSPI03G08860CmaCh06G010610Cucurbita maxima (Rimu)cmacpiB841
CSPI03G08860CmoCh14G020920Cucurbita moschata (Rifu)cmocpiB243
CSPI03G08860Cp4.1LG08g01220Cucurbita pepo (Zucchini)cpecpiB854
CSPI03G08860Cp4.1LG03g16770Cucurbita pepo (Zucchini)cpecpiB611
CSPI03G08860Carg21008Silver-seed gourdcarcpiB0529
CSPI03G08860Carg24638Silver-seed gourdcarcpiB0417
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI03G08860CSPI03G16950Wild cucumber (PI 183967)cpicpiB105
The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G08860Melon (DHL92) v3.6.1cpimedB246
CSPI03G08860Cucumber (Gy14) v2cgybcpiB110
CSPI03G08860Cucumber (Gy14) v1cgycpiB454
CSPI03G08860Cucurbita maxima (Rimu)cmacpiB611
CSPI03G08860Cucurbita maxima (Rimu)cmacpiB826
CSPI03G08860Cucurbita moschata (Rifu)cmocpiB814
CSPI03G08860Cucurbita moschata (Rifu)cmocpiB826