MELO3C006118 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006118
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Actin depolymerizing factor 8
Location	chr6 : 1169961 .. 1171763 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAAATTCATCATCAGGAATGGCGGTCCATGATGAGTGCAAGCTCAAGTTTTTGGATCTGAAAGCCAAAAGAAAATATAGATTCATAGTGTTCAAGATTGAGGAGAAGATGCAACAGGTGACCGTCGAGAAGGTCGGTGGTCCCGACGAAACCTACGATGATTTCACTGCTTCCATCCCTGCCAATGAGTGTCGTTATGCTGTCTATGATTTTGACTTCACAACCGAAGAGAATTGCCAGAAGAGCAAGATTTACTTCATTGCCTGGTATCGTCTCCATATATTTATCATACTCTTTTGATATCACGTTTTGATCGCCATTTTATCTTTTATTTTTAAATAAATAATTATTAAACTAATCAAAATTAGATTTTCTTAGTAATTTAGATTGGATCACTAAAATTTACAAAAATTTGTTGCAACCAAACATTCACCAAGTTGAAACTTTCAATAATCATGTTGATAAATTCACAACATTTTTTAGGATTTATTGAAATCTTAAGTTTTAAATTTTATATTTGGTTGATACCTTAAATTTTTTTTTAATGATTAGGTTAAGCATTTATTTGAAACAAAATTAAAAATCTTAAAATTCATTAAGTATTTTTTAATGTTTAATTAGCTATTAAATACAAAATTAAAAGTTCGAGAAGACATCTTTCAAAAGTATTGATTTAATTACAGTGGAATTTTGAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTACAACTTTCTTTTTCATCTTTTTAATCTAATATTTAGTTTTACTATTTCATAATTTTTATAGTTCATAAATTAGATGTTTTAAATTAAGATTTACTTTATGAATTTTGAAATTCGGGTCAATTTGTCTATAAACTTTTTAAATTGCAAATTTAGTTTTAGTTGGGTGATTTCTTAAAAAAAAAGTCATAAATTTATTTGGATGTTTTGTATAATAGATTAATTCATTTTAAATTTTATTTTTTTTAGAAATTTACTAAACACAAAATTAAATATTTTGTGATTTTTAGATAAAAATTTAAAAGTTCATTTAAAAACCCAAATTGATATAAAGCTCAAATTTTTAGAGATATGCTTTCTTAGAAAGTTCTATTTTCCTATTAAAAAAAATCATTTTTACTATCTGATAGTTTTGTTAATTTTTAAAATTTTTGAATATGCTAAAGACTTATATGATGTTATCAAAAATTCTAAAAAGAAGACAAATACGAAAAATCTAGATATTGAAACGAGGATAATCCAAAAATAGCAAAATTTTATAGTAGATCGTGGTGTCTAGATTTCTATCGGTATCTATTAGTACATTGATATCATGAACATAGATAGAAGTTTAGGAATCTCTATCACTAATGGAAATTCAATTTTACTATATTTTATAAAAGTAATTCAACTATTTTGTCATTTACAACAATTTTATATTAAACTTTTGTGAATAGGTCACCAGACTCATCAAGAATAAGAAGTAAAATGTTGTATGCAAGTTCGAAGGATAGATTCAAGAGAGAGTTGGATGGAATTCAAGTCGAATTACAAGCCACGGATCCGAGTGAGATGAGCTTTGACATCATTAAATCGAGAGCTCTCTAA

mRNA sequence

GGCAAATTCATCATCAGGAATGGCGGTCCATGATGAGTGCAAGCTCAAGTTTTTGGATCTGAAAGCCAAAAGAAAATATAGATTCATAGTGTTCAAGATTGAGGAGAAGATGCAACAGGTGACCGTCGAGAAGGTCGGTGGTCCCGACGAAACCTACGATGATTTCACTGCTTCCATCCCTGCCAATGAGTGTCGTTATGCTGTCTATGATTTTGACTTCACAACCGAAGAGAATTGCCAGAAGAGCAAGATTTACTTCATTGCCTGGTCACCAGACTCATCAAGAATAAGAAGTAAAATGTTGTATGCAAGTTCGAAGGATAGATTCAAGAGAGAGTTGGATGGAATTCAAGTCGAATTACAAGCCACGGATCCGAGTGAGATGAGCTTTGACATCATTAAATCGAGAGCTCTCTAA

Coding sequence (CDS)

ATGGCGGTCCATGATGAGTGCAAGCTCAAGTTTTTGGATCTGAAAGCCAAAAGAAAATATAGATTCATAGTGTTCAAGATTGAGGAGAAGATGCAACAGGTGACCGTCGAGAAGGTCGGTGGTCCCGACGAAACCTACGATGATTTCACTGCTTCCATCCCTGCCAATGAGTGTCGTTATGCTGTCTATGATTTTGACTTCACAACCGAAGAGAATTGCCAGAAGAGCAAGATTTACTTCATTGCCTGGTCACCAGACTCATCAAGAATAAGAAGTAAAATGTTGTATGCAAGTTCGAAGGATAGATTCAAGAGAGAGTTGGATGGAATTCAAGTCGAATTACAAGCCACGGATCCGAGTGAGATGAGCTTTGACATCATTAAATCGAGAGCTCTCTAA

Protein sequence

MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRYAVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRAL*

Homology

[Close]

BLAST of MELO3C006118 vs. Swiss-Prot
Match: ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.6e-59
Identity = 111/132 (84.09%), Postives = 121/132 (91.67%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAV DECKLKFL+LK+KR YRFI+F+I+   QQV VEK+G PDETYDDFTAS+PANECRY
Sbjct: 8   MAVEDECKLKFLELKSKRNYRFIIFRIDG--QQVVVEKLGNPDETYDDFTASLPANECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AV+DFDF T+ENCQKSKI+FIAWSPDSSR+R KM+YASSKDRFKRELDGIQVELQATDPS
Sbjct: 68  AVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKSRAL 133
           EMSFDIIKSRAL
Sbjct: 128 EMSFDIIKSRAL 137

[Close]

BLAST of MELO3C006118 vs. Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 4.6e-59
Identity = 107/130 (82.31%), Postives = 120/130 (92.31%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           M V+DECK+KFL+LKAKR YRFIVFKI+EK QQV +EK+G P+ETYDDFT+SIP +ECRY
Sbjct: 8   MHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYDFDFTTE+NCQKSKI+FIAWSPD+SR+RSKMLYASSKDRFKRE++GIQVELQATDPS
Sbjct: 68  AVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPS 127

Query: 121 EMSFDIIKSR 131
           EMS DIIK R
Sbjct: 128 EMSLDIIKGR 137

[Close]

BLAST of MELO3C006118 vs. Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-58
Identity = 106/131 (80.92%), Postives = 121/131 (92.37%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAV DECKLKF++LKAKR +RFIVFKIEEK+QQVTVE++G P+E+YDDFT  +P NECRY
Sbjct: 8   MAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLPPNECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AV+DFDF T+ENCQKSKI+FI+WSPD+SR+RSKMLYAS+KDRFKRELDGIQVELQATDPS
Sbjct: 68  AVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKSRA 132
           EMS DIIK+RA
Sbjct: 128 EMSMDIIKARA 138

[Close]

BLAST of MELO3C006118 vs. Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.0e-58
Identity = 107/130 (82.31%), Postives = 117/130 (90.00%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           M V DECKLKFL+LKAKR YRFIVFKI+EK QQV ++K+G P+ETY+DFT SIP +ECRY
Sbjct: 8   MHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYD+DFTT ENCQKSKI+FIAWSPD+SR+RSKMLYASSKDRFKRELDGIQVELQATDPS
Sbjct: 68  AVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKSR 131
           EMS DIIK R
Sbjct: 128 EMSLDIIKGR 137

[Close]

BLAST of MELO3C006118 vs. Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.9e-58
Identity = 106/132 (80.30%), Postives = 121/132 (91.67%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAV DECKLKFL+LKAKR +RFIVFKI EK+QQV V+++G P E+YDDFTA +PA+ECRY
Sbjct: 8   MAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AV+DFDF T+ENCQKSKI+FI+W+PD+SR+RSKMLYASSKDRFKRELDGIQVELQATDPS
Sbjct: 68  AVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKSRAL 133
           EMS DI+KSRAL
Sbjct: 128 EMSMDIVKSRAL 139

[Close]

BLAST of MELO3C006118 vs. TrEMBL
Match: A0A0A0L6A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122480 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 4.2e-67
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTV+KVGGPDETYDDFTASIPANECRY
Sbjct: 8   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASIPANECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYD++FTT ENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS
Sbjct: 68  AVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKSRAL 133
           EMSFDIIKSRAL
Sbjct: 128 EMSFDIIKSRAL 139

[Close]

BLAST of MELO3C006118 vs. TrEMBL
Match: V4TSD2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023304mg PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.6e-61
Identity = 114/132 (86.36%), Postives = 129/132 (97.73%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAVHDECKLKFL+LKAKR YRFIVFKIEEK+QQVTVEK+G P+E+Y+DFTAS+PA+ECRY
Sbjct: 9   MAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRY 68

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYDFDFTT+ENCQKSKI+F+AWSPD+SRIRSKMLYASSKDRF+RELDG+QVELQATDPS
Sbjct: 69  AVYDFDFTTDENCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPS 128

Query: 121 EMSFDIIKSRAL 133
           EMS DI+KSRAL
Sbjct: 129 EMSLDIVKSRAL 140

[Close]

BLAST of MELO3C006118 vs. TrEMBL
Match: M5XE35_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013108mg PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 7.6e-61
Identity = 115/132 (87.12%), Postives = 126/132 (95.45%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAVHD+CKLKFL+LKAKR +RFIVFKIEEK+QQV VEKVGGPDE+YDDF AS+PA+ECRY
Sbjct: 8   MAVHDDCKLKFLELKAKRNHRFIVFKIEEKIQQVIVEKVGGPDESYDDFAASMPADECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYDFDFTT ENCQKSKI+FIAW+PD+SR+RSKMLYASSKDRFKRELDGIQVELQATDPS
Sbjct: 68  AVYDFDFTTNENCQKSKIFFIAWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKSRAL 133
           EMS DIIK RAL
Sbjct: 128 EMSLDIIKGRAL 139

[Close]

BLAST of MELO3C006118 vs. TrEMBL
Match: M0S950_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.3e-60
Identity = 113/132 (85.61%), Postives = 127/132 (96.21%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAVHDECKLKFLDLKAKR YRFIVFKI+EK+QQVTVEK+G PDETYDDFTAS+PA+ECRY
Sbjct: 96  MAVHDECKLKFLDLKAKRNYRFIVFKIDEKIQQVTVEKLGQPDETYDDFTASLPADECRY 155

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AV+DFDF T+E+CQKSKI+FI+W+PD+SR+RSKMLYASSKDRFKRELDGIQVELQATDPS
Sbjct: 156 AVFDFDFVTDEHCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPS 215

Query: 121 EMSFDIIKSRAL 133
           EMS DI+K RAL
Sbjct: 216 EMSIDIVKGRAL 227

[Close]

BLAST of MELO3C006118 vs. TrEMBL
Match: A0A061G4D9_THECC (Actin depolymerizing factor 8 OS=Theobroma cacao GN=TCM_016232 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 8.4e-60
Identity = 111/132 (84.09%), Postives = 126/132 (95.45%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAV+DECK KFL+LKAKR YRFIVFKIEEK+QQV VEK+GGP ++YDD +AS+PANECRY
Sbjct: 8   MAVNDECKRKFLELKAKRSYRFIVFKIEEKIQQVVVEKLGGPSDSYDDLSASLPANECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYDFDFTT+ENCQKSKI+FIAWSPD+SR+RSKMLYASSKDRF+RELDG+QVELQATDPS
Sbjct: 68  AVYDFDFTTDENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFRRELDGVQVELQATDPS 127

Query: 121 EMSFDIIKSRAL 133
           EMSFDI+K RAL
Sbjct: 128 EMSFDIVKGRAL 139

[Close]

BLAST of MELO3C006118 vs. TAIR10
Match: AT4G25590.1 (AT4G25590.1 actin depolymerizing factor 7)

HSP 1 Score: 229.9 bits (585), Expect = 8.9e-61
Identity = 111/132 (84.09%), Postives = 121/132 (91.67%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAV DECKLKFL+LK+KR YRFI+F+I+   QQV VEK+G PDETYDDFTAS+PANECRY
Sbjct: 8   MAVEDECKLKFLELKSKRNYRFIIFRIDG--QQVVVEKLGNPDETYDDFTASLPANECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AV+DFDF T+ENCQKSKI+FIAWSPDSSR+R KM+YASSKDRFKRELDGIQVELQATDPS
Sbjct: 68  AVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKSRAL 133
           EMSFDIIKSRAL
Sbjct: 128 EMSFDIIKSRAL 137

[Close]

BLAST of MELO3C006118 vs. TAIR10
Match: AT4G00680.1 (AT4G00680.1 actin depolymerizing factor 8)

HSP 1 Score: 228.4 bits (581), Expect = 2.6e-60
Identity = 107/130 (82.31%), Postives = 120/130 (92.31%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           M V+DECK+KFL+LKAKR YRFIVFKI+EK QQV +EK+G P+ETYDDFT+SIP +ECRY
Sbjct: 8   MHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYDFDFTTE+NCQKSKI+FIAWSPD+SR+RSKMLYASSKDRFKRE++GIQVELQATDPS
Sbjct: 68  AVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPS 127

Query: 121 EMSFDIIKSR 131
           EMS DIIK R
Sbjct: 128 EMSLDIIKGR 137

[Close]

BLAST of MELO3C006118 vs. TAIR10
Match: AT1G01750.1 (AT1G01750.1 actin depolymerizing factor 11)

HSP 1 Score: 225.7 bits (574), Expect = 1.7e-59
Identity = 107/130 (82.31%), Postives = 117/130 (90.00%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           M V DECKLKFL+LKAKR YRFIVFKI+EK QQV ++K+G P+ETY+DFT SIP +ECRY
Sbjct: 8   MHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYD+DFTT ENCQKSKI+FIAWSPD+SR+RSKMLYASSKDRFKRELDGIQVELQATDPS
Sbjct: 68  AVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKSR 131
           EMS DIIK R
Sbjct: 128 EMSLDIIKGR 137

[Close]

BLAST of MELO3C006118 vs. TAIR10
Match: AT5G52360.1 (AT5G52360.1 actin depolymerizing factor 10)

HSP 1 Score: 216.9 bits (551), Expect = 7.8e-57
Identity = 107/132 (81.06%), Postives = 114/132 (86.36%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAV DECKLKFL+LKAKR YRFI+F+I+   QQV VEK+G P E YDDFT  +P NECRY
Sbjct: 8   MAVEDECKLKFLELKAKRNYRFIIFRIDG--QQVVVEKLGSPQENYDDFTNYLPPNECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYDFDFTT EN QKSKI+FIAWSPDSSR+R KM+YASSKDRFKRELDGIQVELQATDPS
Sbjct: 68  AVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKSRAL 133
           EMS DIIKSRAL
Sbjct: 128 EMSLDIIKSRAL 137

[Close]

BLAST of MELO3C006118 vs. TAIR10
Match: AT5G59890.1 (AT5G59890.1 actin depolymerizing factor 4)

HSP 1 Score: 214.2 bits (544), Expect = 5.0e-56
Identity = 99/130 (76.15%), Postives = 115/130 (88.46%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAVHD+CKL+FL+LKAKR +RFIV+KIEEK +QV VEKVG P  TY+DF AS+PA+ECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           A+YDFDF T ENCQKSKI+FIAW PD +++RSKM+YASSKDRFKRELDGIQVELQATDP+
Sbjct: 68  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMSFDIIKSR 131
           EM  D++KSR
Sbjct: 128 EMDLDVLKSR 137

[Close]

BLAST of MELO3C006118 vs. NCBI nr
Match: gi|659075277|ref|XP_008438059.1| (PREDICTED: actin-depolymerizing factor 7-like [Cucumis melo])

HSP 1 Score: 268.1 bits (684), Expect = 8.3e-69
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY
Sbjct: 8   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS
Sbjct: 68  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKSRAL 133
           EMSFDIIKSRAL
Sbjct: 128 EMSFDIIKSRAL 139

[Close]

BLAST of MELO3C006118 vs. NCBI nr
Match: gi|778677238|ref|XP_011650757.1| (PREDICTED: actin-depolymerizing factor 7-like [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 6.0e-67
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTV+KVGGPDETYDDFTASIPANECRY
Sbjct: 8   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASIPANECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYD++FTT ENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS
Sbjct: 68  AVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKSRAL 133
           EMSFDIIKSRAL
Sbjct: 128 EMSFDIIKSRAL 139

[Close]

BLAST of MELO3C006118 vs. NCBI nr
Match: gi|567894176|ref|XP_006439576.1| (hypothetical protein CICLE_v10023304mg [Citrus clementina])

HSP 1 Score: 242.7 bits (618), Expect = 3.7e-61
Identity = 114/132 (86.36%), Postives = 129/132 (97.73%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAVHDECKLKFL+LKAKR YRFIVFKIEEK+QQVTVEK+G P+E+Y+DFTAS+PA+ECRY
Sbjct: 9   MAVHDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRY 68

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYDFDFTT+ENCQKSKI+F+AWSPD+SRIRSKMLYASSKDRF+RELDG+QVELQATDPS
Sbjct: 69  AVYDFDFTTDENCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPS 128

Query: 121 EMSFDIIKSRAL 133
           EMS DI+KSRAL
Sbjct: 129 EMSLDIVKSRAL 140

[Close]

BLAST of MELO3C006118 vs. NCBI nr
Match: gi|764625369|ref|XP_004306801.2| (PREDICTED: actin-depolymerizing factor 10 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 241.5 bits (615), Expect = 8.3e-61
Identity = 114/132 (86.36%), Postives = 127/132 (96.21%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAVHD+CKLKFL+LKAKR +RFIVFKIEEK+QQV VEK+GGPDETY+DFT SIPA+ECRY
Sbjct: 8   MAVHDDCKLKFLELKAKRNHRFIVFKIEEKIQQVIVEKIGGPDETYEDFTNSIPADECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYDFDFTTEENCQKSKI+FI+WSPD+SR+RSKMLYASSKDRFKREL+GIQVELQATDPS
Sbjct: 68  AVYDFDFTTEENCQKSKIFFISWSPDTSRVRSKMLYASSKDRFKRELEGIQVELQATDPS 127

Query: 121 EMSFDIIKSRAL 133
           EMS D+IK RAL
Sbjct: 128 EMSLDVIKGRAL 139

[Close]

BLAST of MELO3C006118 vs. NCBI nr
Match: gi|568845458|ref|XP_006476590.1| (PREDICTED: actin-depolymerizing factor 1 [Citrus sinensis])

HSP 1 Score: 241.5 bits (615), Expect = 8.3e-61
Identity = 113/132 (85.61%), Postives = 129/132 (97.73%), Query Frame = 1


Query: 1   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 60
           MAVHD+CKLKFL+LKAKR YRFIVFKIEEK+QQVTVEK+G P+E+Y+DFTAS+PA+ECRY
Sbjct: 8   MAVHDDCKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGEPNESYEDFTASLPADECRY 67

Query: 61  AVYDFDFTTEENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVELQATDPS 120
           AVYDFDFTT+ENCQKSKI+F+AWSPD+SRIRSKMLYASSKDRF+RELDG+QVELQATDPS
Sbjct: 68  AVYDFDFTTDENCQKSKIFFVAWSPDTSRIRSKMLYASSKDRFRRELDGVQVELQATDPS 127

Query: 121 EMSFDIIKSRAL 133
           EMS DI+KSRAL
Sbjct: 128 EMSLDIVKSRAL 139

The following BLAST results are available for this feature:

BLAST of MELO3C006118 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ADF7_ARATH	1.6e-59	84.09	Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1	[more]
ADF8_ARATH	4.6e-59	82.31	Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2	[more]
ADF_LILLO	1.3e-58	80.92	Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1	[more]
ADF10_ARATH	3.0e-58	82.31	Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1	[more]
ADF1_ORYSJ	3.9e-58	80.30	Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1	[more]

BLAST of MELO3C006118 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6A2_CUCSA	4.2e-67	96.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122480 PE=3 SV=1	[more]
V4TSD2_9ROSI	2.6e-61	86.36	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023304mg PE=3 SV=1	[more]
M5XE35_PRUPE	7.6e-61	87.12	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013108mg PE=3 SV=1	[more]
M0S950_MUSAM	1.3e-60	85.61	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1	[more]
A0A061G4D9_THECC	8.4e-60	84.09	Actin depolymerizing factor 8 OS=Theobroma cacao GN=TCM_016232 PE=3 SV=1	[more]

BLAST of MELO3C006118 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25590.1	8.9e-61	84.09	actin depolymerizing factor 7	[more]
AT4G00680.1	2.6e-60	82.31	actin depolymerizing factor 8	[more]
AT1G01750.1	1.7e-59	82.31	actin depolymerizing factor 11	[more]
AT5G52360.1	7.8e-57	81.06	actin depolymerizing factor 10	[more]
AT5G59890.1	5.0e-56	76.15	actin depolymerizing factor 4	[more]

BLAST of MELO3C006118 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075277\|ref\|XP_008438059.1\|	8.3e-69	100.00	PREDICTED: actin-depolymerizing factor 7-like [Cucumis melo]	[more]
gi\|778677238\|ref\|XP_011650757.1\|	6.0e-67	96.97	PREDICTED: actin-depolymerizing factor 7-like [Cucumis sativus]	[more]
gi\|567894176\|ref\|XP_006439576.1\|	3.7e-61	86.36	hypothetical protein CICLE_v10023304mg [Citrus clementina]	[more]
gi\|764625369\|ref\|XP_004306801.2\|	8.3e-61	86.36	PREDICTED: actin-depolymerizing factor 10 isoform X1 [Fragaria vesca subsp. vesc...	[more]
gi\|568845458\|ref\|XP_006476590.1\|	8.3e-61	85.61	PREDICTED: actin-depolymerizing factor 1 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002108	ADF-H
IPR017904	ADF/Cofilin

Vocabulary: **Molecular Function**
Term	Definition
GO:0003779	actin binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0015629	actin cytoskeleton

Vocabulary: **Biological Process**
Term	Definition
GO:0030042	actin filament depolymerization

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003779	actin binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006118T1	MELO3C006118T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 7..129 score: 9.6
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 5..132 score: 1.6
IPR002108	Actin-depolymerising factor homology domain	PROFILE	PS51263	ADF_H	coord: 1..132 score: 39
IPR017904	ADF/Cofilin/Destrin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..131 score: 1.6E
None	No IPR available	PANTHER	PTHR11913:SF30	ACTIN-DEPOLYMERIZING FACTOR 10-RELATED	coord: 1..131 score: 1.6E
None	No IPR available	unknown	SSF55753	Actin depolymerizing proteins	coord: 1..130 score: 1.28

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C006118	Csa3G122480	Cucumber (Chinese Long) v2	cumeB236
MELO3C006118	Cla021242	Watermelon (97103) v1	mewmB461
MELO3C006118	Cla006177	Watermelon (97103) v1	mewmB466
MELO3C006118	Cla97C05G082010	Watermelon (97103) v2	mewmbB434
MELO3C006118	Bhi01G000263	Wax gourd	mewgoB533
MELO3C006118	CSPI03G08860	Wild cucumber (PI 183967)	cpimeB230
MELO3C006118	Cucsa.258290	Cucumber (Gy14) v1	cgymeB439
MELO3C006118	CmaCh06G010610	Cucurbita maxima (Rimu)	cmameB769
MELO3C006118	CmaCh14G020300	Cucurbita maxima (Rimu)	cmameB242
MELO3C006118	CmoCh14G020920	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006118	Lsi05G020310	Bottle gourd (USVL1VR-Ls)	lsimeB378
MELO3C006118	Cp4.1LG08g01220	Cucurbita pepo (Zucchini)	cpemeB809
MELO3C006118	Cp4.1LG03g16770	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006118	Carg24638	Silver-seed gourd	carmeB0389
MELO3C006118	Carg21008	Silver-seed gourd	carmeB0497
MELO3C006118	CsaV3_3G009000	Cucumber (Chinese Long) v3	cucmeB236

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
MELO3C006118	MELO3C006910	Melon (DHL92) v3.5.1	memeB150

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006118	Cucurbita maxima (Rimu)	cmameB763
MELO3C006118	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006118	Cucurbita moschata (Rifu)	cmomeB759
MELO3C006118	Watermelon (Charleston Gray)	mewcgB427
MELO3C006118	Watermelon (Charleston Gray)	mewcgB430
MELO3C006118	Cucumber (Gy14) v2	cgybmeB200